IVF0013391.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0013391.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Calcium-binding EF-hand
Location	chr06: 19206146 .. 19206769 (-)
Sequence length	624
RNA-Seq Expression	IVF0013391.2
Synteny	IVF0013391.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGCTTTCCATGGCGCTCCTTCTCCGAAACCACATTCACATTCTCCTTCTTCTTCTAATCTTCTTCTTCTTCTTCTTTCTTCTTCTTCACTTCTCCCTCATATATATCCCCCATTCCACTCCCACTTTTCTTCACTTCAAACTCAATCCCTAATTCCTAATTCTATCTCACAATCTGACTTCAATGGCATTTTCCGCTGAGAAATCAGGATTCGAGGACTGGCTACCGACGATGGCAGAGAGGCTGGGCGGCGAGGGGCTCATCGGGGAGCTGTGCAATGGATTCAATCTTCTGATGGATAGAGAGAAGGGAGTGATTGATTTTGAGAGCCTGAAGAGGAACGCGGCGGCGCTAGGGCTGGCGGATCTAAGCGATGAGGATCTGAGATCAATGTTGAGGGAAGGGGATTTTGATGGTGATGGTGCTCTTAATCAGATGGAGTTTTGTGTTCTTATGTTTAGATTGAGCCCTGAGTTGATGGATGAATCCTGGTTCTTGCTTGAGGAAGCTCTACATCAAGAATTCAAGGATTTTTGTTGATTTCTTTTTTCTTCTTCTCTTTCTTTCTTTCTTTTTATCTTTTTTTTCTTTTTAATTAATTACTGATTTTCTTAACTTACTG

mRNA sequence

GTTGGCTTTCCATGGCGCTCCTTCTCCGAAACCACATTCACATTCTCCTTCTTCTTCTAATCTTCTTCTTCTTCTTCTTTCTTCTTCTTCACTTCTCCCTCATATATATCCCCCATTCCACTCCCACTTTTCTTCACTTCAAACTCAATCCCTAATTCCTAATTCTATCTCACAATCTGACTTCAATGGCATTTTCCGCTGAGAAATCAGGATTCGAGGACTGGCTACCGACGATGGCAGAGAGGCTGGGCGGCGAGGGGCTCATCGGGGAGCTGTGCAATGGATTCAATCTTCTGATGGATAGAGAGAAGGGAGTGATTGATTTTGAGAGCCTGAAGAGGAACGCGGCGGCGCTAGGGCTGGCGGATCTAAGCGATGAGGATCTGAGATCAATGTTGAGGGAAGGGGATTTTGATGGTGATGGTGCTCTTAATCAGATGGAGTTTTGTGTTCTTATGTTTAGATTGAGCCCTGAGTTGATGGATGAATCCTGGTTCTTGCTTGAGGAAGCTCTACATCAAGAATTCAAGGATTTTTGTTGATTTCTTTTTTCTTCTTCTCTTTCTTTCTTTCTTTTTATCTTTTTTTTCTTTTTAATTAATTACTGATTTTCTTAACTTACTG

Coding sequence (CDS)

ATGGCATTTTCCGCTGAGAAATCAGGATTCGAGGACTGGCTACCGACGATGGCAGAGAGGCTGGGCGGCGAGGGGCTCATCGGGGAGCTGTGCAATGGATTCAATCTTCTGATGGATAGAGAGAAGGGAGTGATTGATTTTGAGAGCCTGAAGAGGAACGCGGCGGCGCTAGGGCTGGCGGATCTAAGCGATGAGGATCTGAGATCAATGTTGAGGGAAGGGGATTTTGATGGTGATGGTGCTCTTAATCAGATGGAGTTTTGTGTTCTTATGTTTAGATTGAGCCCTGAGTTGATGGATGAATCCTGGTTCTTGCTTGAGGAAGCTCTACATCAAGAATTCAAGGATTTTTGTTGA

Protein sequence

MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC

Homology

[Close]

BLAST of IVF0013391.2 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 8.2e-39
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 10  FEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADLSDEDLR 69
           F D+LPTMA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGL DL+DED+R
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 70  SMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEF 115
            M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L+ E + +EF
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of IVF0013391.2 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.2e-35
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 10  FEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADLSDEDLR 69
           F+D+ PTMA +LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGL DL+D+D+R
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 70  SMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEF 115
            M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ E + +EF
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of IVF0013391.2 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 4.2e-27
Identity = 59/104 (56.73%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 10  FEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDEDLRS 69
           +ED LP MAE++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ED + 
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 70  MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQE 114
           M+REGD DGDGALNQ EFCVLM RLSPE+M+++   LE+AL QE
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of IVF0013391.2 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDED 66
           K  F D+L  M +++  +    E+   F L  D E G I F++LKR A  LG  +LSDE+
Sbjct: 83  KMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEE 142

Query: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLS 96
           L+ M+ E D DGDG +N+ EF  +M + S
Sbjct: 143 LQEMIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of IVF0013391.2 vs. ExPASy Swiss-Prot
Match: Q9R1K9 (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDED 66
           K  F D+L  M +++  +    E+   F L  D E G I F++LKR A  LG  +L+DE+
Sbjct: 83  KMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEE 142

Query: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLS 96
           L+ M+ E D DGDG +N+ EF  +M + S
Sbjct: 143 LQEMIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of IVF0013391.2 vs. ExPASy TrEMBL
Match: A0A1S3BSY1 (calcium-binding protein PBP1 OS=Cucumis melo OX=3656 GN=LOC103493375 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.7e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 119
           DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118

[Close]

BLAST of IVF0013391.2 vs. ExPASy TrEMBL
Match: A0A0A0L347 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099590 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLM+REKGVIDFESLKRNAAALGL 
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLG 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 119
           DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELM+ESWFLLEEALHQEFKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDFC 118

[Close]

BLAST of IVF0013391.2 vs. ExPASy TrEMBL
Match: A0A6J1EN05 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111435976 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.0e-55
Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 119
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL+QEFK FC
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 118

[Close]

BLAST of IVF0013391.2 vs. ExPASy TrEMBL
Match: A0A6J1JAW3 (calcium-binding protein PBP1 OS=Cucurbita maxima OX=3661 GN=LOC111483314 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.2e-54
Identity = 107/117 (91.45%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDF SLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFSSLKRNAAALGLA 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDF 118
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL QEFK F
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALSQEFKGF 117

[Close]

BLAST of IVF0013391.2 vs. ExPASy TrEMBL
Match: A0A6J1CM41 (calcium-binding protein PBP1 OS=Momordica charantia OX=3673 GN=LOC111012869 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.1e-49
Identity = 97/112 (86.61%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDED 66
           +SGF DWLPTMA RLGGEGLIGELC+GF+LLMDREKGVIDFESLKRNAAALGL DL+DED
Sbjct: 11  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDED 70

Query: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 119
           LR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L++AL  EF+DFC
Sbjct: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCLDQALTHEFRDFC 122

[Close]

BLAST of IVF0013391.2 vs. NCBI nr
Match: XP_008452312.1 (PREDICTED: calcium-binding protein PBP1 [Cucumis melo])

HSP 1 Score: 242 bits (617), Expect = 1.27e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118
           DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118

[Close]

BLAST of IVF0013391.2 vs. NCBI nr
Match: XP_004149304.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN56198.1 hypothetical protein Csa_010363 [Cucumis sativus])

HSP 1 Score: 237 bits (604), Expect = 1.22e-78
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLM+REKGVIDFESLKRNAAALGL 
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLG 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118
           DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELM+ESWFLLEEALHQEFKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDFC 118

[Close]

BLAST of IVF0013391.2 vs. NCBI nr
Match: XP_038903612.1 (calcium-binding protein KRP1-like [Benincasa hispida])

HSP 1 Score: 233 bits (593), Expect = 1.47e-76
Identity = 112/118 (94.92%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF AE+SGF+DWLPTMA+RLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA
Sbjct: 29  MAFGAEQSGFQDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 88

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118
           DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSP+LMDESWFLLEEAL+QEFKDFC
Sbjct: 89  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFLLEEALNQEFKDFC 146

[Close]

BLAST of IVF0013391.2 vs. NCBI nr
Match: XP_022929391.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >XP_023552392.1 calcium-binding protein PBP1 [Cucurbita pepo subsp. pepo] >KAG6577399.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015477.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224 bits (571), Expect = 1.32e-73
Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL+QEFK FC
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 118

[Close]

BLAST of IVF0013391.2 vs. NCBI nr
Match: XP_022985275.1 (calcium-binding protein PBP1 [Cucurbita maxima])

HSP 1 Score: 218 bits (555), Expect = 3.64e-71
Identity = 107/117 (91.45%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDF SLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFSSLKRNAAALGLA 60

Query: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDF 117
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL QEFK F
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALSQEFKGF 117

[Close]

BLAST of IVF0013391.2 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 161.0 bits (406), Expect = 5.8e-40
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 10  FEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADLSDEDLR 69
           F D+LPTMA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGL DL+DED+R
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 70  SMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEF 115
            M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L+ E + +EF
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of IVF0013391.2 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 147.9 bits (372), Expect = 5.1e-36
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 10  FEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADLSDEDLR 69
           F+D+ PTMA +LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGL DL+D+D+R
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 70  SMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEF 115
            M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ E + +EF
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of IVF0013391.2 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 59/104 (56.73%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 10  FEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDEDLRS 69
           +ED LP MAE++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ED + 
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 70  MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQE 114
           M+REGD DGDGALNQ EFCVLM RLSPE+M+++   LE+AL QE
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of IVF0013391.2 vs. TAIR 10
Match: AT5G19450.1 (calcium-dependent protein kinase 19 )

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 33/104 (31.73%), Postives = 47/104 (45.19%), Query Frame = 0


Query: 14  LPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDEDLRSMLRE 73
           L  +AE L  E + G +   F ++  ++ G I+ E LK     LG   + D DL+ ++  
Sbjct: 348 LRVIAEHLSVEEVAG-IKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEA 407

Query: 74  GDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDF 118
            D DGDG LN  EF  +   L     DE        LH+ F  F
Sbjct: 408 ADVDGDGTLNYGEFVAVSVHLKKMANDEH-------LHKAFSFF 443

[Close]

BLAST of IVF0013391.2 vs. TAIR 10
Match: AT5G19450.2 (calcium-dependent protein kinase 19 )

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 33/104 (31.73%), Postives = 47/104 (45.19%), Query Frame = 0


Query: 14  LPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDEDLRSMLRE 73
           L  +AE L  E + G +   F ++  ++ G I+ E LK     LG   + D DL+ ++  
Sbjct: 348 LRVIAEHLSVEEVAG-IKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEA 407

Query: 74  GDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDF 118
            D DGDG LN  EF  +   L     DE        LH+ F  F
Sbjct: 408 ADVDGDGTLNYGEFVAVSVHLKKMANDEH-------LHKAFSFF 443

The following BLAST results are available for this feature:

BLAST of IVF0013391.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81831	8.2e-39	75.47	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9LSQ6	7.2e-35	66.98	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
Q9ZPX9	4.2e-27	56.73	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
Q2TBN3	2.1e-10	40.45	Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1	[more]
Q9R1K9	4.7e-10	39.33	Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1	[more]

BLAST of IVF0013391.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSY1	4.7e-61	100.00	calcium-binding protein PBP1 OS=Cucumis melo OX=3656 GN=LOC103493375 PE=4 SV=1	[more]
A0A0A0L347	1.5e-59	97.46	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099590 PE=...	[more]
A0A6J1EN05	1.0e-55	92.37	calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111435976 ...	[more]
A0A6J1JAW3	7.2e-54	91.45	calcium-binding protein PBP1 OS=Cucurbita maxima OX=3661 GN=LOC111483314 PE=4 SV...	[more]
A0A6J1CM41	9.1e-49	86.61	calcium-binding protein PBP1 OS=Momordica charantia OX=3673 GN=LOC111012869 PE=4...	[more]

BLAST of IVF0013391.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452312.1	1.27e-80	100.00	PREDICTED: calcium-binding protein PBP1 [Cucumis melo]	[more]
XP_004149304.1	1.22e-78	97.46	calcium-binding protein KRP1 [Cucumis sativus] >KGN56198.1 hypothetical protein ...	[more]
XP_038903612.1	1.47e-76	94.92	calcium-binding protein KRP1-like [Benincasa hispida]	[more]
XP_022929391.1	1.32e-73	92.37	calcium-binding protein PBP1-like [Cucurbita moschata] >XP_023552392.1 calcium-b...	[more]
XP_022985275.1	3.64e-71	91.45	calcium-binding protein PBP1 [Cucurbita maxima]	[more]

BLAST of IVF0013391.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27280.1	5.8e-40	75.47	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	5.1e-36	66.98	pinoid-binding protein 1	[more]
AT2G46600.1	3.0e-28	56.73	Calcium-binding EF-hand family protein	[more]
AT5G19450.1	2.5e-06	31.73	calcium-dependent protein kinase 19	[more]
AT5G19450.2	2.5e-06	31.73	calcium-dependent protein kinase 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 41..93 e-value: 3.2E-20 score: 71.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 62..97 score: 10.831213
None	No IPR available	GENE3D	1.10.238.10		coord: 8..117 e-value: 9.9E-21 score: 75.8
None	No IPR available	PANTHER	PTHR47319:SF6	CALCIUM-BINDING PROTEIN KRP1	coord: 2..117
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 2..117
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 75..87
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 9..91

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0013391	IVF0013391	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0013391.2-exon	IVF0013391.2-exon-chr06:19206146..19206769	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0013391.2-three_prime_utr	IVF0013391.2-three_prime_utr-chr06:19206146..19206227	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0013391.2-cds	IVF0013391.2-cds-chr06:19206228..19206584	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0013391.2-five_prime_utr	IVF0013391.2-five_prime_utr-chr06:19206585..19206769	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0013391.2	IVF0013391.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding