IVF0012920.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGCTCGCCATTGGAATCCCTTTCTCTTCCTCTCCATCTCTATCTCTCCATTTTTCTTTCTCCACAGCTCACACAGTGGCTGAGTTTCATGAATCTAAGCTCTCCCAAAAACCCAAATTCTCCATTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCAACTTCTCTCACAATTCCAGACCATAATCATCACCATTTCCCCCATTCTCAATCTCCATCTTTCTCCAGATTTTCCTTCAATTCCTCCCATTTTCCCCCCTTGAGGCTTGTAATTCCTCTCCCTTTTCCCTCCATGTTCTCAACCCCTTCGTTCTCTCCTTTTCCCTTCTCCTCTCTCTCCCCATCCTCTTCCTTCTCGCCCCCCATTTCATCCCTTCCCGCCCTCAATCCATCCCCATCCCCCCACCAGACGATCACGACGATCTCTTTCTCTTCAATCGCGCCACCGCTGGATCAAATCCCAGCAACCCATCTACGTTTTCCCATCTTTCTTCCTCCTCCAACCCTAAATTGAAGATTGCTTTCCTCTTTCTCACTAATTCCGACCTCCATTTTGCTCCTCTTTGGATTCGGTTCTTCCCCAATTCCTCAGATCTTTACAATGTTTATGTTCATGCTGATCCCTCCATCAACATTACCCGCCCTGGCGGTCCGTTTCTGGGTCGGTTTATTGTTTCCAAGAGAACTTATCGTGGCTCACCAACGCTTATCTCTGCCACGCGCCGCCTCATAGCCACCGCCATGATTGATGATCCAGCTAATGCGTATTTTGCTCTTTTGTCTCAGTATTGTATTCCTCTTCATTCCTTTTCTTATGTTTATAACTCTTTGTTTTCTTCCACTACTTTTGATTCTACCTCTACTCCCTCTGAGTTGACTCATTTGGGTGTAAGGATTCGATTCAAGAGTTTTATTGAGATTGTATCTAAAGAACGGCATTTATGGAAGAGGTATAATGCTAGGGGTCGGTTCACCATGATGCCCGAGGTTCCGTTTGAGAAATTTCGAGTTGGATCTCAGTTCTTTGTGTTGACTAGAAAACATGCGTTGGTGGTTGTTAATGATCGGACGTTGTGGAGGAAATTTAAGATTCCTTGTCAAAGTTCTGATGATTGTTACCCTGAAGAACACTATTTTCCTACCCTTCTTTCCATGAGGGATCTTAGTGGTTGTACGCAATACACGCTTACTCGGGTTAATTGGACTGGAACTGCTAATGGACATCCGTATACGTATCGAAGTTCAGAGGTTTCTCCTATGCTTATTCACCAGCTTCGGAAATCGAATTATTCCGAATCTTATTTGTTTGCCCGGAAATTCACTCCGGATTGCTTGAGACCTCTGATGGCTATTGCAAAGTCTGTGATTTTCCGGGACTGAAATCTGTTTCTGGTAAGTTAAATGCGTTAAGAAGTTAGTTTACTTGATTTGTAACCTGCATTCATCCTTGTTCCCTTTGGTTTGAGAATTCTAGTTGTGAGTGTGTCTTTGCTTATGAGTTTACATAGTGTTGCGGGACTTGTGAATGTGTTGAGAATTGAGATTTCTCGTCTATTTTTCTGGTAATGGTAGAGAGACCCTCATAACCGATGGGAAGTTTCGGTGGCTTTTGTCCTACTGATTTCGAATAGCTGTTCTGAATTCAAGTTGATTTTGTTTTACCTCAAGGAAGCAAAGTTTGCTGGGTCGTGTTTCGAAATTGGCCTCCATTGCCGTACTAGAAGGGACCCTTATAGTCCTTTGTGGATAATTTGAAATCTTGATTGCTCTTCATTTTCTAAAGATTGAGACTTGAGGAACATGAGCAATGTGTTTTTAGCCATCTTGATTTATATAATTAATCTGAAATTTTTTGCCTTCTTCTTTTGGTTAGGTAGAAATTAAACCGATCCATAATTCCAATTTAGTGTAGATTTTGTACTCTTTTGGCTCACTAGTGAACAGGGTACCTTACGTACTGTGTGTCTGTGTTATTACAGGTTAAAGACAAAAATAAAAGTTGTCTGGCCAGTGGTATAGCCTTACTTCTCGATAAGGAAGAAGAAAAAGAAAAAGTTTTGTGTGGGAATATGGTTATGAAGAGGCGCCAAAGTGCCCACTGCCCATAACCCCACTTTCATCCAGACTGCAGAACTGCCAGTCCAGCCAAAGCTTTGGACAAAACATTTTTTTTTCAAGGGAAAAGAATAGTTCGAGAAAGAGATACAAGTGAAGCAGAATGCAAGGTATTCTTGTCGAAAGTTGTATTTTAATTTTAATTTCTTCCACTTTTTATTCCTTGTATTTTGATGATGTAACAGTAGAAATACTGGCAGAAGAACTTAAAGAAAAGAAATTGAATCATTCTCCTGTCATTTCTATGGTTTTTTTTTTTTTTGTAAATAACTAAATATGTAATATCATGGAAGGAATTGAAGAATGGAAAGGATTATTGGTCAC TCGCTCGCCATTGGAATCCCTTTCTCTTCCTCTCCATCTCTATCTCTCCATTTTTCTTTCTCCACAGCTCACACAGTGGCTGAGTTTCATGAATCTAAGCTCTCCCAAAAACCCAAATTCTCCATTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCAACTTCTCTCACAATTCCAGACCATAATCATCACCATTTCCCCCATTCTCAATCTCCATCTTTCTCCAGATTTTCCTTCAATTCCTCCCATTTTCCCCCCTTGAGGCTTGTAATTCCTCTCCCTTTTCCCTCCATGTTCTCAACCCCTTCGTTCTCTCCTTTTCCCTTCTCCTCTCTCTCCCCATCCTCTTCCTTCTCGCCCCCCATTTCATCCCTTCCCGCCCTCAATCCATCCCCATCCCCCCACCAGACGATCACGACGATCTCTTTCTCTTCAATCGCGCCACCGCTGGATCAAATCCCAGCAACCCATCTACGTTTTCCCATCTTTCTTCCTCCTCCAACCCTAAATTGAAGATTGCTTTCCTCTTTCTCACTAATTCCGACCTCCATTTTGCTCCTCTTTGGATTCGGTTCTTCCCCAATTCCTCAGATCTTTACAATGTTTATGTTCATGCTGATCCCTCCATCAACATTACCCGCCCTGGCGGTCCGTTTCTGGGTCGGTTTATTGTTTCCAAGAGAACTTATCGTGGCTCACCAACGCTTATCTCTGCCACGCGCCGCCTCATAGCCACCGCCATGATTGATGATCCAGCTAATGCGTATTTTGCTCTTTTGTCTCAGTATTGTATTCCTCTTCATTCCTTTTCTTATGTTTATAACTCTTTGTTTTCTTCCACTACTTTTGATTCTACCTCTACTCCCTCTGAGTTGACTCATTTGGGTGTAAGGATTCGATTCAAGAGTTTTATTGAGATTGTATCTAAAGAACGGCATTTATGGAAGAGGTATAATGCTAGGGGTCGGTTCACCATGATGCCCGAGGTTCCGTTTGAGAAATTTCGAGTTGGATCTCAGTTCTTTGTGTTGACTAGAAAACATGCGTTGGTGGTTGTTAATGATCGGACGTTGTGGAGGAAATTTAAGATTCCTTGTCAAAGTTCTGATGATTGTTACCCTGAAGAACACTATTTTCCTACCCTTCTTTCCATGAGGGATCTTAGTGGTTGTACGCAATACACGCTTACTCGGGTTAATTGGACTGGAACTGCTAATGGACATCCGTATACGTATCGAAGTTCAGAGGTTTCTCCTATGCTTATTCACCAGCTTCGGAAATCGAATTATTCCGAATCTTATTTGTTTGCCCGGAAATTCACTCCGGATTGCTTGAGACCTCTGATGGCTATTGCAAAGTCTGTGATTTTCCGGGACTGAAATCTGTTTCTGGTTAAAGACAAAAATAAAAGTTGTCTGGCCAGTGGTATAGCCTTACTTCTCGATAAGGAAGAAGAAAAAGAAAAAGTTTTGTGTGGGAATATGGTTATGAAGAGGCGCCAAAGTGCCCACTGCCCATAACCCCACTTTCATCCAGACTGCAGAACTGCCAGTCCAGCCAAAGCTTTGGACAAAACATTTTTTTTTCAAGGGAAAAGAATAGTTCGAGAAAGAGATACAAGTGAAGCAGAATGCAAGGTATTCTTGTCGAAAGTTGTATTTTAATTTTAATTTCTTCCACTTTTTATTCCTTGTATTTTGATGATGTAACAGTAGAAATACTGGCAGAAGAACTTAAAGAAAAGAAATTGAATCATTCTCCTGTCATTTCTATGGTTTTTTTTTTTTTTGTAAATAACTAAATATGTAATATCATGGAAGGAATTGAAGAATGGAAAGGATTATTGGTCAC ATGATTGATGATCCAGCTAATGCGTATTTTGCTCTTTTGTCTCAGTATTGTATTCCTCTTCATTCCTTTTCTTATGTTTATAACTCTTTGTTTTCTTCCACTACTTTTGATTCTACCTCTACTCCCTCTGAGTTGACTCATTTGGGTGTAAGGATTCGATTCAAGAGTTTTATTGAGATTGTATCTAAAGAACGGCATTTATGGAAGAGGTATAATGCTAGGGGTCGGTTCACCATGATGCCCGAGGTTCCGTTTGAGAAATTTCGAGTTGGATCTCAGTTCTTTGTGTTGACTAGAAAACATGCGTTGGTGGTTGTTAATGATCGGACGTTGTGGAGGAAATTTAAGATTCCTTGTCAAAGTTCTGATGATTGTTACCCTGAAGAACACTATTTTCCTACCCTTCTTTCCATGAGGGATCTTAGTGGTTGTACGCAATACACGCTTACTCGGGTTAATTGGACTGGAACTGCTAATGGACATCCGTATACGTATCGAAGTTCAGAGGTTTCTCCTATGCTTATTCACCAGCTTCGGAAATCGAATTATTCCGAATCTTATTTGTTTGCCCGGAAATTCACTCCGGATTGCTTGAGACCTCTGATGGCTATTGCAAAGTCTGTGATTTTCCGGGACTGA MIDDPANAYFALLSQYCIPLHSFSYVYNSLFSSTTFDSTSTPSELTHLGVRIRFKSFIEIVSKERHLWKRYNARGRFTMMPEVPFEKFRVGSQFFVLTRKHALVVVNDRTLWRKFKIPCQSSDDCYPEEHYFPTLLSMRDLSGCTQYTLTRVNWTGTANGHPYTYRSSEVSPMLIHQLRKSNYSESYLFARKFTPDCLRPLMAIAKSVIFRD Homology
BLAST of IVF0012920.2 vs. ExPASy Swiss-Prot
Match: Q65XS5 (Glycosyltransferase BC10 OS=Oryza sativa subsp. japonica OX=39947 GN=BC10 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.1e-16 Identity = 69/239 (28.87%), Postives = 108/239 (45.19%), Query Frame = 0
BLAST of IVF0012920.2 vs. ExPASy TrEMBL
Match: A0A5D3BX20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold758G00160 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.1e-120 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of IVF0012920.2 vs. ExPASy TrEMBL
Match: A0A1S3BN97 (uncharacterized protein LOC103491926 OS=Cucumis melo OX=3656 GN=LOC103491926 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.1e-120 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of IVF0012920.2 vs. ExPASy TrEMBL
Match: A0A0A0M320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639510 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.0e-119 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of IVF0012920.2 vs. ExPASy TrEMBL
Match: A0A6J1H8U4 (uncharacterized protein LOC111461548 OS=Cucurbita moschata OX=3662 GN=LOC111461548 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114 Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of IVF0012920.2 vs. ExPASy TrEMBL
Match: A0A6J1JL39 (uncharacterized protein LOC111485574 OS=Cucurbita maxima OX=3661 GN=LOC111485574 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114 Identity = 200/212 (94.34%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of IVF0012920.2 vs. NCBI nr
Match: XP_008450271.1 (PREDICTED: uncharacterized protein LOC103491926 [Cucumis melo] >KAA0060170.1 uncharacterized protein E6C27_scaffold542G00450 [Cucumis melo var. makuwa] >TYK04241.1 uncharacterized protein E5676_scaffold758G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 441 bits (1134), Expect = 4.78e-154 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of IVF0012920.2 vs. NCBI nr
Match: XP_004139082.1 (glycosyltransferase BC10 [Cucumis sativus] >KGN66919.2 hypothetical protein Csa_007205 [Cucumis sativus]) HSP 1 Score: 439 bits (1128), Expect = 3.91e-153 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of IVF0012920.2 vs. NCBI nr
Match: XP_038880211.1 (glycosyltransferase BC10 [Benincasa hispida]) HSP 1 Score: 430 bits (1106), Expect = 8.73e-150 Identity = 206/212 (97.17%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of IVF0012920.2 vs. NCBI nr
Match: XP_023515630.1 (uncharacterized protein LOC111779742 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424 bits (1089), Expect = 3.26e-147 Identity = 201/212 (94.81%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of IVF0012920.2 vs. NCBI nr
Match: XP_022960881.1 (uncharacterized protein LOC111461548 [Cucurbita moschata]) HSP 1 Score: 422 bits (1084), Expect = 1.88e-146 Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of IVF0012920.2 vs. TAIR 10
Match: AT5G22070.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 327.0 bits (837), Expect = 1.1e-89 Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 0
BLAST of IVF0012920.2 vs. TAIR 10
Match: AT3G52060.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 265.0 bits (676), Expect = 5.2e-71 Identity = 125/212 (58.96%), Postives = 155/212 (73.11%), Query Frame = 0
BLAST of IVF0012920.2 vs. TAIR 10
Match: AT3G52060.2 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 265.0 bits (676), Expect = 5.2e-71 Identity = 125/212 (58.96%), Postives = 155/212 (73.11%), Query Frame = 0
BLAST of IVF0012920.2 vs. TAIR 10
Match: AT5G25330.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 195.7 bits (496), Expect = 3.9e-50 Identity = 103/221 (46.61%), Postives = 134/221 (60.63%), Query Frame = 0
BLAST of IVF0012920.2 vs. TAIR 10
Match: AT4G32290.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 187.6 bits (475), Expect = 1.0e-47 Identity = 100/229 (43.67%), Postives = 129/229 (56.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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