IVF0012336.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0012336.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	translationally-controlled tumor protein homolog
Location	chr02: 610104 .. 611794 (-)
Sequence length	833
RNA-Seq Expression	IVF0012336.2
Synteny	IVF0012336.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAAATTTGTTTCGTCTTTGATTTGTTTCTTCATATTTTCAATTCTGTTTTGCAGTCAACAGCCATGCTTCTCTACCAAGACCTTCTAACAGGTGAAACTCACTTCCTTTTCTTTCTTTCTTCTTCTAAAACCACTTCTATCTTCTCTCTGTTTTTGTTTTCAATCCCATTTGATAATTATTTGGTTTCTTTATGTTTGATTTCTATCGTTTCTACTAGTTGTATTCATATGTGCTTCTTATGTAGAAATAGGATTTTGGAAATGTCCTAACTAAAGTAACATCAATAGAAAGCAAAATGAAACAAAGCAATTATGGGAAGCTTAATTTTAAAAACTAAAAATCAAATATTTACTAAATATGATTTTGGTTTTTCTTTTTATAATTTAGGTAAGAAATCGTAGAGTATTTAGTTAAAAATAAATAAATAAAAACATATTGCTTGAAAGTCGACTTCTTGTGTTATAAAAACCAATTCATTAGGAAAAAGACATTAGTTTTCTCAAAACTAAGTTTATAAACATTTCCTATTCGTGGATTTATTATTATTATTATTATTATTATTATTTTCTTAATACATTAATATATCAATTGAGTCATACTCGATTTGACTGGATTTCTCGAACGAACTTTTCAGGTGATGAACTTCTTTCCGATTCTTTTCCATACAATGAAATTGAGAATGGGATGCTATGGGAAGTGGAAGGAAAGGTAACTGAACTTTTCTTTTTCTTTTAGTTTCTCTTTCCTTTCTCAAATAACCAATTCTCTCTGGGGTTCTAATTTGACTTATTTGGATGTTCTAATTTGACTTATTTGGATGGCAGTGGGTTGTACAAGGGGCAATCGACGTAGACATCGGGGCGAACCCGTCTGCCGAAGGTGCCGATGAGGATGAAGGTGTAGATGATCAAGCTGTCAAGGTTGTTGACATTGTTGACACATTTAGACTTCAGGTAATAAAGAAAATATTAGTCATTTTAATTCTTTGACCTTTAGTTTTTTCTTCTAAATTGCTAAGAGAAGTGGTTGGGTATTATTGGCAGGAACAACCTCCGTTTGACAAGAAGCAATTCATCACATACATGAAAAGATACATCAAATTGCTAACTCCTAAACTAGACGAAGAAAAACAAGAGTTGTTCAAGAAATATATCCCAGAGGCAACCAAGTTTCTCATTTCAAAGATCAATGACCTCCAATTGTAAGTTACAGTTACTAATTTTAATATTTCATCGACTTTACGACCTCAACCTCGACCCATTTAGTGCATGTGTGTAACGGATGAGTTATTGTTTGTGTTTTAATGTAGCTTTGTGGGCGAAGGCATGCATGATGATGGGACAATGGTTTTTGCATACTATAAAGAAGGGGCAACCGATCCAACCTTTATCTATATTGCTTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCCCATCGAATTTCAACATATCATACTTTTCTTTTTACTTTTTACTTTTTTACCCTTTCTTCTTTTCTTTTTTTTTTTTTTACTTTTTCTTTTACTTTTTTAGTTCATTGTCAAAGTTTTTTTTTTTTTCCTTTTTTCAGAAGACTTGAGAATTTATATTAAGCTTATGCTCTAATGGAGTAATATAATGTGACAATGAGGCTTTTTCTCTTTTACCTTTTCATGTCTTTGACTGTCCTATTTGAATGATGAAGAA

mRNA sequence

GCAAAATTTGTTTCGTCTTTGATTTGTTTCTTCATATTTTCAATTCTGTTTTGCAGTCAACAGCCATGCTTCTCTACCAAGACCTTCTAACAGGTGATGAACTTCTTTCCGATTCTTTTCCATACAATGAAATTGAGAATGGGATGCTATGGGAAGTGGAAGGAAAGTGGGTTGTACAAGGGGCAATCGACGTAGACATCGGGGCGAACCCGTCTGCCGAAGGTGCCGATGAGGATGAAGGTGTAGATGATCAAGCTGTCAAGGTTGTTGACATTGTTGACACATTTAGACTTCAGGAACAACCTCCGTTTGACAAGAAGCAATTCATCACATACATGAAAAGATACATCAAATTGCTAACTCCTAAACTAGACGAAGAAAAACAAGAGTTGTTCAAGAAATATATCCCAGAGGCAACCAAGTTTCTCATTTCAAAGATCAATGACCTCCAATTCTTTGTGGGCGAAGGCATGCATGATGATGGGACAATGGTTTTTGCATACTATAAAGAAGGGGCAACCGATCCAACCTTTATCTATATTGCTTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCCCATCGAATTTCAACATATCATACTTTTCTTTTTACTTTTTACTTTTTTACCCTTTCTTCTTTTCTTTTTTTTTTTTTTACTTTTTCTTTTACTTTTTTAGTTCATTGTCAAAGTTTTTTTTTTTTTCCTTTTTTCAGAAGACTTGAGAATTTATATTAAGCTTATGCTCTAATGGAGTAATATAATGTGACAATGAGGCTTTTTCTCTTTTACCTTTTCATGTCTTTGACTGTCCTATTTGAATGATGAAGAA

Coding sequence (CDS)

ATGCTTCTCTACCAAGACCTTCTAACAGGTGATGAACTTCTTTCCGATTCTTTTCCATACAATGAAATTGAGAATGGGATGCTATGGGAAGTGGAAGGAAAGTGGGTTGTACAAGGGGCAATCGACGTAGACATCGGGGCGAACCCGTCTGCCGAAGGTGCCGATGAGGATGAAGGTGTAGATGATCAAGCTGTCAAGGTTGTTGACATTGTTGACACATTTAGACTTCAGGAACAACCTCCGTTTGACAAGAAGCAATTCATCACATACATGAAAAGATACATCAAATTGCTAACTCCTAAACTAGACGAAGAAAAACAAGAGTTGTTCAAGAAATATATCCCAGAGGCAACCAAGTTTCTCATTTCAAAGATCAATGACCTCCAATTCTTTGTGGGCGAAGGCATGCATGATGATGGGACAATGGTTTTTGCATACTATAAAGAAGGGGCAACCGATCCAACCTTTATCTATATTGCTTATGGGTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKFLISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC

Homology

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BLAST of IVF0012336.2 vs. ExPASy Swiss-Prot
Match: Q9ZSW9 (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 GN=TCTP PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 7.3e-81
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EI NG+LWEVEGKWVVQGA+DVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQP FDKKQF+TYMKR+IKLLTPKLDEEKQE FKK I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SK++DLQFFVGE MHDDG++VFAYY+ GATDPTF+Y AY LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy Swiss-Prot
Match: Q5J907 (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera OX=51953 GN=TCTP PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.6e-80
Identity = 142/168 (84.52%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EI NGMLWEVEGKWV+QGA++VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQP FDKKQF+T+MKRYIK LTPKLD EKQELFKK+I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SK++DLQFFVGE MHDDG +VFAYYK+GATDPTF+Y AYGLKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy Swiss-Prot
Match: P35681 (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TCTP PE=1 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 8.3e-77
Identity = 138/168 (82.14%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EIENG+LWEV+GKWVVQGAIDVDIGANPSAEG  +DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQF+T+MKRYIK L+ KLD EKQE FKK I  ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+ K+ DLQFFVGE MHDDG +VFAYYK+GATDPTF+Y ++GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 284.3 bits (726), Expect = 9.2e-76
Identity = 135/168 (80.36%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EI+NGMLWEV+GKWVVQGA+DV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQP FDKKQF+TY+KRYIK LTPKL+ E QE FKK I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SK+ D QFFVGEGMHDD  +VFAYYK+G+ DPTF+Y+A GLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy Swiss-Prot
Match: Q6DUX3 (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum OX=4081 GN=TCTP PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.0e-75
Identity = 135/168 (80.36%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY E+ENG+LWEV+GKWVVQGA+DV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAV+VVDIVDTFRLQEQP FDKKQF+T+MKRYIK LTPKL+ E QE FKK I  ATKF
Sbjct: 61  DDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+ KI DLQFFVGE MHDDG +VFAYYKEG+ DP F+YIA GLKE+KC
Sbjct: 121 LLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy TrEMBL
Match: A0A5D3CG94 (Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004100 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy TrEMBL
Match: A0A1S3BQL7 (translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=LOC103492149 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy TrEMBL
Match: A0A0A0LYG1 (TCTP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569310 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.7e-88
Identity = 164/168 (97.62%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQP FDKKQFITYMKRYIKLLTPKLDEEKQELF+K+IPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSFDKKQFITYMKRYIKLLTPKLDEEKQELFRKHIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LISKI+DLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKIDDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy TrEMBL
Match: A0A6J1C579 (translationally-controlled tumor protein homolog OS=Momordica charantia OX=3673 GN=LOC111007510 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 155/168 (92.26%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EIENG+LWEVEGKWVVQGA+DVDIGANPSAEGAD DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADADEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQF+TYMKRYIKLLTPKLD EKQELFKK+I +ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTYMKRYIKLLTPKLDAEKQELFKKHIQDATKY 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKI+DLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKISDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. ExPASy TrEMBL
Match: A0A6J1HY50 (translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469078 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.0e-81
Identity = 149/168 (88.69%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           M++YQD LTGDELLSDSFPY EIEN MLWEVEGKW+VQGA+DVDIGANPSAEG +EDE V
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           +++AVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQE+FKK+IPEATKF
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKINDLQFFVGEGMHDD  +VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. NCBI nr
Match: XP_008450611.1 (PREDICTED: translationally-controlled tumor protein homolog [Cucumis melo] >KAA0050911.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa] >TYK10262.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (868), Expect = 2.82e-117
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. NCBI nr
Match: XP_038880105.1 (translationally-controlled tumor protein homolog [Benincasa hispida])

HSP 1 Score: 331 bits (848), Expect = 3.17e-114
Identity = 164/168 (97.62%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKL+EEK ELFKK+IPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLEEEKLELFKKHIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LISKINDLQFFVGEGMHDDG+MVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGSMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. NCBI nr
Match: XP_004135602.1 (translationally-controlled tumor protein homolog [Cucumis sativus] >KGN66054.1 hypothetical protein Csa_007632 [Cucumis sativus])

HSP 1 Score: 330 bits (847), Expect = 4.51e-114
Identity = 164/168 (97.62%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQP FDKKQFITYMKRYIKLLTPKLDEEKQELF+K+IPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSFDKKQFITYMKRYIKLLTPKLDEEKQELFRKHIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LISKI+DLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKIDDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. NCBI nr
Match: XP_022135588.1 (translationally-controlled tumor protein homolog [Momordica charantia])

HSP 1 Score: 318 bits (815), Expect = 3.42e-109
Identity = 155/168 (92.26%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EIENG+LWEVEGKWVVQGA+DVDIGANPSAEGAD DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADADEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQF+TYMKRYIKLLTPKLD EKQELFKK+I +ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTYMKRYIKLLTPKLDAEKQELFKKHIQDATKY 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168
           L+SKI+DLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKISDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. NCBI nr
Match: XP_023531839.1 (translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (793), Expect = 7.73e-106
Identity = 150/168 (89.29%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           M++YQD LTGDELLSDSFPY EIEN MLWEVEGKW+VQGA+DVDIGANPSAEG +EDE V
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           D++AVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQE+FKK+IPEATKF
Sbjct: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168
           L+SKINDLQFFVGEGMHDD  +VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of IVF0012336.2 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein )

HSP 1 Score: 274.6 bits (701), Expect = 5.2e-74
Identity = 132/169 (78.11%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQD+LTGDELLSDSFPY EIENGMLWEVEGKWVV+GA+D DIGANP  EG  EDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEGG-EDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DDQAVKVVDI+DTFRLQEQP FDKKQF+ +MKRYIK L+PKLD E QELFKK+I  ATKF
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LISKINDLQFFVGEGMH-DDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SK+ D QFFVGE M  ++G++VFAYY+EGATDPTF+Y+AYGLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]

BLAST of IVF0012336.2 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein )

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-72
Identity = 129/168 (76.79%), Postives = 146/168 (86.90%), Query Frame = 0


Query: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EIENG+LWEVEGKWV  GA+DV+IGANPSAE   EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120
           DD   KVVDIVDTFRLQEQP +DKK FI Y+K+YIKLLTPKL EE Q +FKK I  ATKF
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+ +++D QFFVGEGMHDD T+VFAYYKEG+T+PTF+Y A+GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

The following BLAST results are available for this feature:

BLAST of IVF0012336.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSW9	7.3e-81	86.31	Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 G...	[more]
Q5J907	1.6e-80	84.52	Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tener...	[more]
P35681	8.3e-77	82.14	Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica...	[more]
P43349	9.2e-76	80.36	Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN...	[more]
Q6DUX3	6.0e-75	80.36	Translationally-controlled tumor protein homolog OS=Solanum lycopersicum OX=4081...	[more]

BLAST of IVF0012336.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG94	1.4e-90	100.00	Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuw...	[more]
A0A1S3BQL7	1.4e-90	100.00	translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LYG1	3.7e-88	97.62	TCTP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569310 PE=3 S...	[more]
A0A6J1C579	1.9e-84	92.26	translationally-controlled tumor protein homolog OS=Momordica charantia OX=3673 ...	[more]
A0A6J1HY50	2.0e-81	88.69	translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima ...	[more]

BLAST of IVF0012336.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450611.1	2.82e-117	100.00	PREDICTED: translationally-controlled tumor protein homolog [Cucumis melo] >KAA0...	[more]
XP_038880105.1	3.17e-114	97.62	translationally-controlled tumor protein homolog [Benincasa hispida]	[more]
XP_004135602.1	4.51e-114	97.62	translationally-controlled tumor protein homolog [Cucumis sativus] >KGN66054.1 h...	[more]
XP_022135588.1	3.42e-109	92.26	translationally-controlled tumor protein homolog [Momordica charantia]	[more]
XP_023531839.1	7.73e-106	89.29	translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0012336.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05540.1	5.2e-74	78.11	Methionine sulfoxide reductase (MSS4-like) family protein	[more]
AT3G16640.1	2.2e-72	76.79	translationally controlled tumor protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018105	Translationally controlled tumour protein	PRINTS	PR01653	TCTPROTEIN	coord: 46..57 score: 68.45 coord: 1..20 score: 61.05 coord: 60..79 score: 60.36
IPR018105	Translationally controlled tumour protein	PFAM	PF00838	TCTP	coord: 1..164 e-value: 3.1E-57 score: 193.5
IPR018105	Translationally controlled tumour protein	PANTHER	PTHR11991	TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED	coord: 1..168
IPR011323	Mss4/translationally controlled tumour-associated TCTP	GENE3D	2.170.150.10	Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A	coord: 1..168 e-value: 5.4E-57 score: 194.7
None	No IPR available	PANTHER	PTHR11991:SF11	TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOG	coord: 1..168
IPR018103	Translationally controlled tumour protein, conserved site	PROSITE	PS01002	TCTP_1	coord: 45..55
IPR018103	Translationally controlled tumour protein, conserved site	PROSITE	PS01003	TCTP_2	coord: 125..147
IPR034737	Translationally controlled tumour protein (TCTP) domain	PROSITE	PS51797	TCTP_3	coord: 1..168 score: 58.157745
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 1..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0012336	IVF0012336	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0012336.2-exon	IVF0012336.2-exon-chr02:610104..610482	exon
IVF0012336.2-exon	IVF0012336.2-exon-chr02:610591..610748	exon
IVF0012336.2-exon	IVF0012336.2-exon-chr02:610839..610967	exon
IVF0012336.2-exon	IVF0012336.2-exon-chr02:611084..611157	exon
IVF0012336.2-exon	IVF0012336.2-exon-chr02:611702..611794	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0012336.2-three_prime_utr	IVF0012336.2-three_prime_utr-chr02:610104..610364	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0012336.2-cds	IVF0012336.2-cds-chr02:610365..610482	CDS
IVF0012336.2-cds	IVF0012336.2-cds-chr02:610591..610748	CDS
IVF0012336.2-cds	IVF0012336.2-cds-chr02:610839..610967	CDS
IVF0012336.2-cds	IVF0012336.2-cds-chr02:611084..611157	CDS
IVF0012336.2-cds	IVF0012336.2-cds-chr02:611702..611729	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0012336.2-five_prime_utr	IVF0012336.2-five_prime_utr-chr02:611730..611794	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0012336.2	IVF0012336.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005509	calcium ion binding