IVF0011974.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0011974.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Enzymatic polyprotein
Location	chr10: 24953739 .. 24955064 (-)
Sequence length	1161
RNA-Seq Expression	IVF0011974.2
Synteny	IVF0011974.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACGTCTGTATACCCTGACAACATGTGGAGCTGATGTCTGGAAACAGAAATTTGTCGAAGGACTACCGCATTATATCTCCAAAAAATTCTATCAAACTATGACAACAAACTCTGTCAATCAACAAATAGATTGGGCAAATCTCACCTATGGAGATATTTCATCCACGGTTCAAATGATATGTGTTAGTCTCTGCACATAGAATAAGCACACAACGAAGGTGATCAAAGATTCCGACTACAGGAAAGAATTGGGCACCTTCTGCAAGCAGTATGGTCTGTCTCAAGGGTCGAAGGAAGAAAAGAATAAAAAGAAAAAATATTCTTCCAAGAAACTCTTTACAAGAAACAAACCTAAAGATCAAGAGCCTCCTCGAAGAAGAAAGCATTATTACAATAAGAGTACAGACAAGAAAAGATACTCCTTAAAGACTAATACGATTTGCTTCAAATGCAATCAAAAGGGTCACTATGCTAATCGTTGTCCCCTAAAGGATAGAATCAATGCTCTGACAATAGATGAAGAGACAAAGCAATCCCTCCTTTATGCCATAAAGACGGATAATGATACCTCATCTCAAACTGAATCCTCATCAGAAGAAGATTATATCAATATCCTAAGAGGAGAAGAATCTTCCTCTGAAGAAGAATTCTACTCTCAAAGTGAATCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAATGTTCTGGCCATATTAATGTCATCACACAAGATCAAGAAACTCTTTTCGACCTCATCGAGCAGATCCCTGATGAAGAAGCAAAAATAACCTGCCTCCTCAAATTAAGGAAAAGTTTAGAAGAACAAATGCCCCAAAAGACGATTCAAAATCCGATCATGTATTCATATCAAGACATACTAAATCGAATCAAAGGCGAAACAATGTTGCCTGTTCAAGTCGAAGACCTTCACCATGAGGTAAGGATCCTTAAAAGAGAAGTTGCTGATAATAAGCAACGACTCATCCACCTTGAAAACGCATTTCAAGCATCTCAAATTCTAAGAGAAAACCCAGAAACCTCAACAAACGATTTTGAAAGAAAAATCGCGGGAAAAACACTATTGATAGAAGAAACGGGTAATATCAATAGTATCAGCAAAGTCCATAATAAAAAATGGATGTCAAAAATAGTCTTTAAGGTCAAAGACTTCCAACTCGAAGCTCTAGCACTTATTGATTCGGGAGCAGATCAAAACGTCATACAAGAAGGACTTGTCCCTTTTAAGTACTTCGAAAAAACAAAGGAATCATTATCTGGAGCTGGCGGAAATCCTCTCAACATCTAG

mRNA sequence

ATGGCACGTCTGTATACCCTGACAACATGTGGAGCTGATAATAAGCACACAACGAAGGTGATCAAAGATTCCGACTACAGGAAAGAATTGGGCACCTTCTGCAAGCAGTATGGTCTGTCTCAAGGGTCGAAGGAAGAAAAGAATAAAAAGAAAAAATATTCTTCCAAGAAACTCTTTACAAGAAACAAACCTAAAGATCAAGAGCCTCCTCGAAGAAGAAAGCATTATTACAATAAGAGTACAGACAAGAAAAGATACTCCTTAAAGACTAATACGATTTGCTTCAAATGCAATCAAAAGGGTCACTATGCTAATCGTTGTCCCCTAAAGGATAGAATCAATGCTCTGACAATAGATGAAGAGACAAAGCAATCCCTCCTTTATGCCATAAAGACGGATAATGATACCTCATCTCAAACTGAATCCTCATCAGAAGAAGATTATATCAATATCCTAAGAGGAGAAGAATCTTCCTCTGAAGAAGAATTCTACTCTCAAAGTGAATCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAATGTTCTGGCCATATTAATGTCATCACACAAGATCAAGAAACTCTTTTCGACCTCATCGAGCAGATCCCTGATGAAGAAGCAAAAATAACCTGCCTCCTCAAATTAAGGAAAAGTTTAGAAGAACAAATGCCCCAAAAGACGATTCAAAATCCGATCATGTATTCATATCAAGACATACTAAATCGAATCAAAGGCGAAACAATGTTGCCTGTTCAAGTCGAAGACCTTCACCATGAGGTAAGGATCCTTAAAAGAGAAGTTGCTGATAATAAGCAACGACTCATCCACCTTGAAAACGCATTTCAAGCATCTCAAATTCTAAGAGAAAACCCAGAAACCTCAACAAACGATTTTGAAAGAAAAATCGCGGGAAAAACACTATTGATAGAAGAAACGGGTAATATCAATAGTATCAGCAAAGTCCATAATAAAAAATGGATGTCAAAAATAGTCTTTAAGGTCAAAGACTTCCAACTCGAAGCTCTAGCACTTATTGATTCGGGAGCAGATCAAAACGTCATACAAGAAGGACTTGTCCCTTTTAAGTACTTCGAAAAAACAAAGGAATCATTATCTGGAGCTGGCGGAAATCCTCTCAACATCTAG

Coding sequence (CDS)

ATGGCACGTCTGTATACCCTGACAACATGTGGAGCTGATAATAAGCACACAACGAAGGTGATCAAAGATTCCGACTACAGGAAAGAATTGGGCACCTTCTGCAAGCAGTATGGTCTGTCTCAAGGGTCGAAGGAAGAAAAGAATAAAAAGAAAAAATATTCTTCCAAGAAACTCTTTACAAGAAACAAACCTAAAGATCAAGAGCCTCCTCGAAGAAGAAAGCATTATTACAATAAGAGTACAGACAAGAAAAGATACTCCTTAAAGACTAATACGATTTGCTTCAAATGCAATCAAAAGGGTCACTATGCTAATCGTTGTCCCCTAAAGGATAGAATCAATGCTCTGACAATAGATGAAGAGACAAAGCAATCCCTCCTTTATGCCATAAAGACGGATAATGATACCTCATCTCAAACTGAATCCTCATCAGAAGAAGATTATATCAATATCCTAAGAGGAGAAGAATCTTCCTCTGAAGAAGAATTCTACTCTCAAAGTGAATCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAATGTTCTGGCCATATTAATGTCATCACACAAGATCAAGAAACTCTTTTCGACCTCATCGAGCAGATCCCTGATGAAGAAGCAAAAATAACCTGCCTCCTCAAATTAAGGAAAAGTTTAGAAGAACAAATGCCCCAAAAGACGATTCAAAATCCGATCATGTATTCATATCAAGACATACTAAATCGAATCAAAGGCGAAACAATGTTGCCTGTTCAAGTCGAAGACCTTCACCATGAGGTAAGGATCCTTAAAAGAGAAGTTGCTGATAATAAGCAACGACTCATCCACCTTGAAAACGCATTTCAAGCATCTCAAATTCTAAGAGAAAACCCAGAAACCTCAACAAACGATTTTGAAAGAAAAATCGCGGGAAAAACACTATTGATAGAAGAAACGGGTAATATCAATAGTATCAGCAAAGTCCATAATAAAAAATGGATGTCAAAAATAGTCTTTAAGGTCAAAGACTTCCAACTCGAAGCTCTAGCACTTATTGATTCGGGAGCAGATCAAAACGTCATACAAGAAGGACTTGTCCCTTTTAAGTACTTCGAAAAAACAAAGGAATCATTATCTGGAGCTGGCGGAAATCCTCTCAACATCTAG

Protein sequence

MARLYTLTTCGADNKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPKDQEPPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQSLLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGKCSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDILNRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDFERKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGLVPFKYFEKTKESLSGAGGNPLNI

Homology

[Close]

BLAST of IVF0011974.2 vs. ExPASy TrEMBL
Match: A0A5A7U8D3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00520 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.7e-192
Identity = 350/374 (93.58%), Postives = 360/374 (96.26%), Query Frame = 0


Query: 13  DNKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPKDQEPPRR 72
           +NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEKNKKKKYSSKKLF RNKPKDQEPPRR
Sbjct: 114 ENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKNKKKKYSSKKLFRRNKPKDQEPPRR 173

Query: 73  RKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQSLLYAIKT 132
           +KHYYNKS DKKRYS KTNTICFKCNQKGHYANRCPLKDRI ALTIDEETKQSLLYAIKT
Sbjct: 174 KKHYYNKSKDKKRYSSKTNTICFKCNQKGHYANRCPLKDRIKALTIDEETKQSLLYAIKT 233

Query: 133 DNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGKCSGHINV 192
           D+DTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAI CTGRCAGKCSGHINV
Sbjct: 234 DDDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAILCTGRCAGKCSGHINV 293

Query: 193 ITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDILNRIKGET 252
           IT+DQETLFDLIEQIPDE+AK TCLLKLR+SLEEQMPQKTIQNPIMYSYQDILNRIK ET
Sbjct: 294 ITKDQETLFDLIEQIPDEKAKRTCLLKLRQSLEEQMPQKTIQNPIMYSYQDILNRIKRET 353

Query: 253 MLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDFERKIAGKTL 312
            LP+QVEDLHHEVRILKREVADNKQRLI+LENA QASQILRENPETSTNDFERKI GKTL
Sbjct: 354 KLPIQVEDLHHEVRILKREVADNKQRLIYLENALQASQILRENPETSTNDFERKIVGKTL 413

Query: 313 LIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGLVPFKYFEKT 372
           LIEETGNINSISKVHN+KWMS+IVFKV DFQLEALALIDSGADQNVIQEGLVP KYFEKT
Sbjct: 414 LIEETGNINSISKVHNQKWMSEIVFKVNDFQLEALALIDSGADQNVIQEGLVPSKYFEKT 473

Query: 373 KESLSGAGGNPLNI 387
           KESLSGAGGNP NI
Sbjct: 474 KESLSGAGGNPHNI 487

[Close]

BLAST of IVF0011974.2 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 2.4e-175
Identity = 335/444 (75.45%), Postives = 361/444 (81.31%), Query Frame = 0


Query: 1    MARLYTLTTCGAD----------------------------------------------- 60
            MARLYTLTTCGAD                                               
Sbjct: 671  MARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTENSVNQQIDWANLTYGDISSTVQM 730

Query: 61   --------NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPK 120
                    NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEK KKKKYSSKK F R+KPK
Sbjct: 731  ICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPK 790

Query: 121  DQEPPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQS 180
            DQE PRRRKH+YNK   KKRYS KTNTICFKCNQKGHYANRCPL+D+INALTIDE+TKQS
Sbjct: 791  DQESPRRRKHHYNKGKGKKRYSSKTNTICFKCNQKGHYANRCPLQDKINALTIDEKTKQS 850

Query: 181  LLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGK 240
            +LYAI++D+DTSSQTESSSEEDYINIL+ E SSSEEEFYSQS+SSDDEGAIPCTGRCAGK
Sbjct: 851  ILYAIRSDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAGK 910

Query: 241  CSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDIL 300
            C GHINVIT+DQETLFDLIEQI DEEAK T LLKL++SLEEQ+PQKTIQN IMY YQDI 
Sbjct: 911  CFGHINVITKDQETLFDLIEQILDEEAKRTYLLKLKQSLEEQVPQKTIQNLIMYWYQDIP 970

Query: 301  NRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQA---SQILRENPETSTND 360
            NR+KGE  +P+QVEDLHHEV+ILKREV +NKQRLI+LENAFQA   SQ+L+EN ETSTND
Sbjct: 971  NRVKGEAKIPIQVEDLHHEVKILKREVTENKQRLIYLENAFQAFQESQVLKENSETSTND 1030

Query: 361  FERKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEG 387
            F+RKIAGK LLIE++GNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQE 
Sbjct: 1031 FKRKIAGKALLIEDSGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEE 1090

[Close]

BLAST of IVF0011974.2 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 7.3e-172
Identity = 331/445 (74.38%), Postives = 355/445 (79.78%), Query Frame = 0


Query: 1    MARLYTLTTCGAD----------------------------------------------- 60
            MARLYTLTTCGAD                                               
Sbjct: 779  MARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQM 838

Query: 61   --------NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKK-YSSKKLFTRNKP 120
                    NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEK KKKK YSSKK F + K 
Sbjct: 839  INVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGKV 898

Query: 121  KDQEPPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQ 180
            KDQE P+RR+H+Y K   KK+YS KTNTICFKCNQKGHYANRCPLKD+INALTIDEETKQ
Sbjct: 899  KDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQ 958

Query: 181  SLLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAG 240
            SLLYAI+ D+DTSSQTESSSEEDYINIL+ E SSSEEEFYSQS+SSDDEGAIPCTGRCAG
Sbjct: 959  SLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAG 1018

Query: 241  KCSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDI 300
            KCSGHINVIT+DQETLF LIEQIPDEEAK TCLLKL++SLEEQ PQK IQNPIMYSYQDI
Sbjct: 1019 KCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDI 1078

Query: 301  LNRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQA---SQILRENPETSTN 360
            LNR+KGE  +P+QVEDLHHEV+ LKREVA+NKQRLI+LENAFQA   SQ+L+EN ETS N
Sbjct: 1079 LNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKENSETSRN 1138

Query: 361  DFERKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQE 387
            DFERKIA K LLI+++G INSISKVHNKKWMSKIVFKVKDFQLE LALIDSGADQNVIQE
Sbjct: 1139 DFERKIARKALLIDDSGKINSISKVHNKKWMSKIVFKVKDFQLETLALIDSGADQNVIQE 1198

[Close]

BLAST of IVF0011974.2 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 7.3e-172
Identity = 331/445 (74.38%), Postives = 355/445 (79.78%), Query Frame = 0


Query: 1    MARLYTLTTCGAD----------------------------------------------- 60
            MARLYTLTTCGAD                                               
Sbjct: 779  MARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQM 838

Query: 61   --------NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKK-YSSKKLFTRNKP 120
                    NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEK KKKK YSSKK F + K 
Sbjct: 839  INVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGKV 898

Query: 121  KDQEPPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQ 180
            KDQE P+RR+H+Y K   KK+YS KTNTICFKCNQKGHYANRCPLKD+INALTIDEETKQ
Sbjct: 899  KDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQ 958

Query: 181  SLLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAG 240
            SLLYAI+ D+DTSSQTESSSEEDYINIL+ E SSSEEEFYSQS+SSDDEGAIPCTGRCAG
Sbjct: 959  SLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAG 1018

Query: 241  KCSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDI 300
            KCSGHINVIT+DQETLF LIEQIPDEEAK TCLLKL++SLEEQ PQK IQNPIMYSYQDI
Sbjct: 1019 KCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDI 1078

Query: 301  LNRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQA---SQILRENPETSTN 360
            LNR+KGE  +P+QVEDLHHEV+ LKREVA+NKQRLI+LENAFQA   SQ+L+EN ETS N
Sbjct: 1079 LNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKENSETSRN 1138

Query: 361  DFERKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQE 387
            DFERKIA K LLI+++G INSISKVHNKKWMSKIVFKVKDFQLE LALIDSGADQNVIQE
Sbjct: 1139 DFERKIARKALLIDDSGKINSISKVHNKKWMSKIVFKVKDFQLETLALIDSGADQNVIQE 1198

[Close]

BLAST of IVF0011974.2 vs. ExPASy TrEMBL
Match: A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.6e-169
Identity = 324/442 (73.30%), Postives = 352/442 (79.64%), Query Frame = 0


Query: 1    MARLYTLTTCGAD----------------------------------------------- 60
            MARLYTLTTCGAD                                               
Sbjct: 780  MARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQM 839

Query: 61   --------NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKK-YSSKKLFTRNKP 120
                    NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEK KKKK YSSKK F ++K 
Sbjct: 840  ICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKA 899

Query: 121  KDQEPPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQ 180
            KDQE PRRR+ +YNK   KK YS KT+TICFKCNQKGHYANRCPLKD+INA+TIDEETKQ
Sbjct: 900  KDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQ 959

Query: 181  SLLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAG 240
            SLLYAI++D+DT+SQTESSSEEDYINIL+ E SSSEEEFYSQS+SSDDEGAIPCTGRCAG
Sbjct: 960  SLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAG 1019

Query: 241  KCSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDI 300
            KCSGHINVIT+DQETLFDLIEQIPDEEAK TCLLKL++SLEEQ PQK IQNPIMYSYQDI
Sbjct: 1020 KCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDI 1079

Query: 301  LNRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDFE 360
            LNR+KGE  +P+QVEDLHHEV+ LKREVA+NKQRLI+LE AFQA Q  + + E ST+DFE
Sbjct: 1080 LNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLETAFQAFQGSQASKEESTSDFE 1139

Query: 361  RKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGLV 387
            RK AGK LLIEE G INSISK+ N+KWMSKIVFKVKDFQLEALALIDSGADQNVIQEGLV
Sbjct: 1140 RKSAGKALLIEEIGTINSISKIQNQKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGLV 1199

[Close]

BLAST of IVF0011974.2 vs. NCBI nr
Match: KAA0050446.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 680 bits (1754), Expect = 3.31e-237
Identity = 350/374 (93.58%), Postives = 360/374 (96.26%), Query Frame = 0


Query: 13  DNKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPKDQEPPRR 72
           +NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEKNKKKKYSSKKLF RNKPKDQEPPRR
Sbjct: 114 ENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKNKKKKYSSKKLFRRNKPKDQEPPRR 173

Query: 73  RKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQSLLYAIKT 132
           +KHYYNKS DKKRYS KTNTICFKCNQKGHYANRCPLKDRI ALTIDEETKQSLLYAIKT
Sbjct: 174 KKHYYNKSKDKKRYSSKTNTICFKCNQKGHYANRCPLKDRIKALTIDEETKQSLLYAIKT 233

Query: 133 DNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGKCSGHINV 192
           D+DTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAI CTGRCAGKCSGHINV
Sbjct: 234 DDDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAILCTGRCAGKCSGHINV 293

Query: 193 ITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDILNRIKGET 252
           IT+DQETLFDLIEQIPDE+AK TCLLKLR+SLEEQMPQKTIQNPIMYSYQDILNRIK ET
Sbjct: 294 ITKDQETLFDLIEQIPDEKAKRTCLLKLRQSLEEQMPQKTIQNPIMYSYQDILNRIKRET 353

Query: 253 MLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDFERKIAGKTL 312
            LP+QVEDLHHEVRILKREVADNKQRLI+LENA QASQILRENPETSTNDFERKI GKTL
Sbjct: 354 KLPIQVEDLHHEVRILKREVADNKQRLIYLENALQASQILRENPETSTNDFERKIVGKTL 413

Query: 313 LIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGLVPFKYFEKT 372
           LIEETGNINSISKVHN+KWMS+IVFKV DFQLEALALIDSGADQNVIQEGLVP KYFEKT
Sbjct: 414 LIEETGNINSISKVHNQKWMSEIVFKVNDFQLEALALIDSGADQNVIQEGLVPSKYFEKT 473

Query: 373 KESLSGAGGNPLNI 386
           KESLSGAGGNP NI
Sbjct: 474 KESLSGAGGNPHNI 487

[Close]

BLAST of IVF0011974.2 vs. NCBI nr
Match: KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 623 bits (1607), Expect = 1.43e-206
Identity = 335/444 (75.45%), Postives = 361/444 (81.31%), Query Frame = 0


Query: 1    MARLYTLTTCGAD----------------------------------------------- 60
            MARLYTLTTCGAD                                               
Sbjct: 671  MARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTENSVNQQIDWANLTYGDISSTVQM 730

Query: 61   --------NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPK 120
                    NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEK KKKKYSSKK F R+KPK
Sbjct: 731  ICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPK 790

Query: 121  DQEPPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQS 180
            DQE PRRRKH+YNK   KKRYS KTNTICFKCNQKGHYANRCPL+D+INALTIDE+TKQS
Sbjct: 791  DQESPRRRKHHYNKGKGKKRYSSKTNTICFKCNQKGHYANRCPLQDKINALTIDEKTKQS 850

Query: 181  LLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGK 240
            +LYAI++D+DTSSQTESSSEEDYINIL+ E SSSEEEFYSQS+SSDDEGAIPCTGRCAGK
Sbjct: 851  ILYAIRSDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAGK 910

Query: 241  CSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDIL 300
            C GHINVIT+DQETLFDLIEQI DEEAK T LLKL++SLEEQ+PQKTIQN IMY YQDI 
Sbjct: 911  CFGHINVITKDQETLFDLIEQILDEEAKRTYLLKLKQSLEEQVPQKTIQNLIMYWYQDIP 970

Query: 301  NRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQA---SQILRENPETSTND 360
            NR+KGE  +P+QVEDLHHEV+ILKREV +NKQRLI+LENAFQA   SQ+L+EN ETSTND
Sbjct: 971  NRVKGEAKIPIQVEDLHHEVKILKREVTENKQRLIYLENAFQAFQESQVLKENSETSTND 1030

Query: 361  FERKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEG 386
            F+RKIAGK LLIE++GNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQE 
Sbjct: 1031 FKRKIAGKALLIEDSGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEE 1090

[Close]

BLAST of IVF0011974.2 vs. NCBI nr
Match: KAA0068171.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 594 bits (1531), Expect = 1.54e-202
Identity = 325/443 (73.36%), Postives = 352/443 (79.46%), Query Frame = 0


Query: 1   MARLYTLTTCGAD----------------------------------------------- 60
           MARLYTLTTCGAD                                               
Sbjct: 12  MARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTIQM 71

Query: 61  --------NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKK-YSSKKLFTRNKP 120
                   NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEK KKKK YSS+K F +NK 
Sbjct: 72  ICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNK- 131

Query: 121 KDQE-PPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETK 180
            DQE PPRRR+HYY K   KK+YS KTNTICFKCNQKGHYANRCPLKD+INALT+DEETK
Sbjct: 132 -DQESPPRRRRHYY-KGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETK 191

Query: 181 QSLLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCA 240
           QSLLYAI+TD++TSSQTESSSEED INIL+ EESS EEEFYSQS SSDDEGAIPCTGRCA
Sbjct: 192 QSLLYAIRTDDETSSQTESSSEEDCINILQEEESSFEEEFYSQSNSSDDEGAIPCTGRCA 251

Query: 241 GKCSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQD 300
           GKCSGHINVIT+DQETLFDLIEQIPDE AK TCLLKL++SLEEQ PQKTIQNPIMYSYQD
Sbjct: 252 GKCSGHINVITKDQETLFDLIEQIPDEGAKRTCLLKLKQSLEEQAPQKTIQNPIMYSYQD 311

Query: 301 ILNRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDF 360
           ILNR+KGE  +P+QVEDLHHEV+ILK+EVA+NKQRLI+LE AFQA Q  +   E ST+DF
Sbjct: 312 ILNRVKGEAKVPIQVEDLHHEVKILKKEVAENKQRLIYLETAFQAFQKSQALKEESTSDF 371

Query: 361 ERKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGL 386
           +RK AGK LLIEE G INSIS++ N+KWMSKIVFKVKDFQLEALALIDSGADQNVIQEGL
Sbjct: 372 KRKSAGKALLIEEIGTINSISRIQNQKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGL 431

[Close]

BLAST of IVF0011974.2 vs. NCBI nr
Match: KAA0054117.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK29407.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 593 bits (1530), Expect = 2.45e-202
Identity = 306/307 (99.67%), Postives = 306/307 (99.67%), Query Frame = 0


Query: 14  NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPKDQEPPRRR 73
           NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPKDQEPPRRR
Sbjct: 321 NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKKYSSKKLFTRNKPKDQEPPRRR 380

Query: 74  KHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQSLLYAIKTD 133
           KHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQSLLYAIKTD
Sbjct: 381 KHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETKQSLLYAIKTD 440

Query: 134 NDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGKCSGHINVI 193
           NDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGKCSGHINVI
Sbjct: 441 NDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCAGKCSGHINVI 500

Query: 194 TQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDILNRIKGETM 253
           TQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDILNRIKGETM
Sbjct: 501 TQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQDILNRIKGETM 560

Query: 254 LPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDFERKIAGKTLL 313
           LPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDFERKIAGKTLL
Sbjct: 561 LPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDFERKIAGKTLL 620

Query: 314 IEETGNI 320
           IEETG I
Sbjct: 621 IEETGII 627

[Close]

BLAST of IVF0011974.2 vs. NCBI nr
Match: TYK21091.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 594 bits (1531), Expect = 3.88e-202
Identity = 325/443 (73.36%), Postives = 352/443 (79.46%), Query Frame = 0


Query: 1   MARLYTLTTCGAD----------------------------------------------- 60
           MARLYTLTTCGAD                                               
Sbjct: 12  MARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTIQM 71

Query: 61  --------NKHTTKVIKDSDYRKELGTFCKQYGLSQGSKEEKNKKKK-YSSKKLFTRNKP 120
                   NKHTTKVIKDSDYRKELGTFCKQYGLSQG KEEK KKKK YSS+K F +NK 
Sbjct: 72  ICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNK- 131

Query: 121 KDQE-PPRRRKHYYNKSTDKKRYSLKTNTICFKCNQKGHYANRCPLKDRINALTIDEETK 180
            DQE PPRRR+HYY K   KK+YS KTNTICFKCNQKGHYANRCPLKD+INALT+DEETK
Sbjct: 132 -DQESPPRRRRHYY-KGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETK 191

Query: 181 QSLLYAIKTDNDTSSQTESSSEEDYINILRGEESSSEEEFYSQSESSDDEGAIPCTGRCA 240
           QSLLYAI+TD++TSSQTESSSEED INIL+ EESS EEEFYSQS SSDDEGAIPCTGRCA
Sbjct: 192 QSLLYAIRTDDETSSQTESSSEEDCINILQEEESSFEEEFYSQSNSSDDEGAIPCTGRCA 251

Query: 241 GKCSGHINVITQDQETLFDLIEQIPDEEAKITCLLKLRKSLEEQMPQKTIQNPIMYSYQD 300
           GKCSGHINVIT+DQETLFDLIEQIPDE AK TCLLKL++SLEEQ PQKTIQNPIMYSYQD
Sbjct: 252 GKCSGHINVITKDQETLFDLIEQIPDEGAKRTCLLKLKQSLEEQAPQKTIQNPIMYSYQD 311

Query: 301 ILNRIKGETMLPVQVEDLHHEVRILKREVADNKQRLIHLENAFQASQILRENPETSTNDF 360
           ILNR+KGE  +P+QVEDLHHEV+ILK+EVA+NKQRLI+LE AFQA Q  +   E ST+DF
Sbjct: 312 ILNRVKGEAKVPIQVEDLHHEVKILKKEVAENKQRLIYLETAFQAFQKSQALKEESTSDF 371

Query: 361 ERKIAGKTLLIEETGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGL 386
           +RK AGK LLIEE G INSIS++ N+KWMSKIVFKVKDFQLEALALIDSGADQNVIQEGL
Sbjct: 372 KRKSAGKALLIEEIGTINSISRIQNQKWMSKIVFKVKDFQLEALALIDSGADQNVIQEGL 431

The following BLAST results are available for this feature:

BLAST of IVF0011974.2 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011974.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8D3	3.7e-192	93.58	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17...	[more]
A0A5A7URX9	2.4e-175	75.45	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21...	[more]
A0A5D3BG41	7.3e-172	74.38	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	7.3e-172	74.38	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5A7UR29	2.6e-169	73.30	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48...	[more]

BLAST of IVF0011974.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050446.1	3.31e-237	93.58	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0057417.1	1.43e-206	75.45	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote...	[more]
KAA0068171.1	1.54e-202	73.36	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0054117.1	2.45e-202	99.67	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK29407.1 Enzymatic polyprote...	[more]
TYK21091.1	3.88e-202	73.36	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0011974.2 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 258..285
None	No IPR available	GENE3D	4.10.60.10		coord: 87..143 e-value: 1.9E-6 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..81
None	No IPR available	PANTHER	PTHR46249:SF33	VIRAL MOVEMENT PROTEIN-RELATED	coord: 22..290
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 22..290
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 93..109 e-value: 0.0051 score: 25.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 94..108 e-value: 8.4E-5 score: 22.5
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 94..108 score: 9.982374
IPR018061	Retropepsins	PFAM	PF00077	RVP	coord: 345..381 e-value: 1.5E-4 score: 22.0
IPR001995	Peptidase A2A, retrovirus, catalytic	PROSITE	PS50175	ASP_PROT_RETROV	coord: 346..381 score: 11.78386
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 78..112

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0011974	IVF0011974	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011974.2-exon	IVF0011974.2-exon-chr10:24953739..24954860	exon
IVF0011974.2-exon	IVF0011974.2-exon-chr10:24955026..24955064	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011974.2-cds	IVF0011974.2-cds-chr10:24953739..24954860	CDS
IVF0011974.2-cds	IVF0011974.2-cds-chr10:24955026..24955064	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0011974.2	IVF0011974.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding