IVF0010859.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0010859.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Location	chr04: 31485045 .. 31486497 (+)
Sequence length	1115
RNA-Seq Expression	IVF0010859.1
Synteny	IVF0010859.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAGAAGAAAGCATCTGATGGCTCATCTTTTTCCTTCACTTCTGATCTCTTCGGGATCAGAGACACTTCTTCGCTCTCTTCTAATCACATTTTTGGCCCTGTTTTCTCTTCTTCTTCTTCTTCTTTCAAGGTATATTATTATTATTCTTTTTGATCTAATTACTACTTTAATTCCCGTCGTTCTTTCTATATTCATGCACTTTTAAGCAGCGGGTTTGACTTAATTTTGGGGTTTTGTCTTTGGGGAAGGCCTCCCAGAACTCCGAAGTCGGTGGTAAATCACATGCTGTTTCGTACTCCCCCAAAACTGGTTAGTTGCATCACAAAAATTGTTGGACGAATTTATTGGAGATAAACTTTGTAAAATGTATCTCGCACCTAAATTATTGCTAACCCTGTTTGTTTGTTTGTTTAGAAGGCAGTTCCAAATATAAGGAATGCAAGAATGGGAGCACATCAAGCAGAGAGGTGGGTTCGTTTTATCAAGAACAGAGAACAAACCCATGTCATCTTAGTTCTTCAATCTACTATGGCGGTCAGGATATCTATACTGATCAAAATCCGGGAACTGGGTTCAACTCTTCTGTGAGTGTTGCATTATTTTCTGTCAAAATTATCCGTTGTTTGTTCTGAACAATAATCTTCTATGTTGCCAGTTGAAGAGAGATGGGGGAGAAGATGATTCTGGTGGTGCTTCCAGAGGAAATTGGTGGCAAGGTATATGCCAATAAGATGTTTGATTAAATGTCACAACCATTTCAAAATATTTCCTGTCTTTTTTTTTTATGGAAACCGACTTTCGCTTATTTATTTTCATTCTATTGAATGCAGGGTCTCTTTACTATTAAGAATCTCACCCTGCCATCAAGGTTTTACTACAAATCCTTTGGTTAACAGCAAATCTTAAGCTCAAAATGCAAGTTAAATTAGCTATTTGATCCTTTTATTCACATGCTCTTTTGCAGATGCAAGATACATTCTATTACCATTAATATAATATATGGAGATCAATTATACAGGATTTTACCAGCCAAAATGATAGTCAGGACGTCTAATTTTAAAGTTAGAGAGGTTCAAAATTTTATACGTAACATTTGTGGATGTTACACTATCATGATATTGGTTATTAACATCATTCCAGCAAAGAACTAGAATGTTGTTTATCAAGTTGTATTTGAAGTCTGTATATAATATATATATATATATATATTTGGTAAGAAATGGATATGAAGACGAGGGAATCTGGAATTGTTTGCGCATAAGATATAGTCTTATCCTTATCTTCATATACCCTCATCTCAGCTTTTCTTATACTTTAATGACTTTATCCATTGTATAATTCTCAGATGTTTCTTCTATTGGTGTAAATGTGCATAAATGTGTTTTGAGGTAATTTACCAACATCAGCATATACATTCTTTTAAAGTAAAAAAGGTTGCGTTTTGAAA

mRNA sequence

ATGTCGGAGAAGAAAGCATCTGATGGCTCATCTTTTTCCTTCACTTCTGATCTCTTCGGGATCAGAGACACTTCTTCGCTCTCTTCTAATCACATTTTTGGCCCTGTTTTCTCTTCTTCTTCTTCTTCTTTCAAGGCCTCCCAGAACTCCGAAGTCGGTGGTAAATCACATGCTGTTTCGTACTCCCCCAAAACTGAAGGCAGTTCCAAATATAAGGAATGCAAGAATGGGAGCACATCAAGCAGAGAGGTGGGTTCGTTTTATCAAGAACAGAGAACAAACCCATGTCATCTTAGTTCTTCAATCTACTATGGCGGTCAGGATATCTATACTGATCAAAATCCGGGAACTGGGTTCAACTCTTCTGTGAGTGTTGCATTATTTTCTGTCAAAATTATCCGTTGTTTGTTCTGAACAATAATCTTCTATGTTGCCAGTTGAAGAGAGATGGGGGAGAAGATGATTCTGGTGGTGCTTCCAGAGGAAATTGGTGGCAAGGGTCTCTTTACTATTAAGAATCTCACCCTGCCATCAAGGTTTTACTACAAATCCTTTGGTTAACAGCAAATCTTAAGCTCAAAATGCAAGTTAAATTAGCTATTTGATCCTTTTATTCACATGCTCTTTTGCAGATGCAAGATACATTCTATTACCATTAATATAATATATGGAGATCAATTATACAGGATTTTACCAGCCAAAATGATAGTCAGGACGTCTAATTTTAAAGTTAGAGAGGTTCAAAATTTTATACGTAACATTTGTGGATGTTACACTATCATGATATTGGTTATTAACATCATTCCAGCAAAGAACTAGAATGTTGTTTATCAAGTTGTATTTGAAGTCTGTATATAATATATATATATATATATATTTGGTAAGAAATGGATATGAAGACGAGGGAATCTGGAATTGTTTGCGCATAAGATATAGTCTTATCCTTATCTTCATATACCCTCATCTCAGCTTTTCTTATACTTTAATGACTTTATCCATTGTATAATTCTCAGATGTTTCTTCTATTGGTGTAAATGTGCATAAATGTGTTTTGAGGTAATTTACCAACATCAGCATATACATTCTTTTAAAGTAAAAAAGGTTGCGTTTTGAAA

Coding sequence (CDS)

ATGTCGGAGAAGAAAGCATCTGATGGCTCATCTTTTTCCTTCACTTCTGATCTCTTCGGGATCAGAGACACTTCTTCGCTCTCTTCTAATCACATTTTTGGCCCTGTTTTCTCTTCTTCTTCTTCTTCTTTCAAGGCCTCCCAGAACTCCGAAGTCGGTGGTAAATCACATGCTGTTTCGTACTCCCCCAAAACTGAAGGCAGTTCCAAATATAAGGAATGCAAGAATGGGAGCACATCAAGCAGAGAGGTGGGTTCGTTTTATCAAGAACAGAGAACAAACCCATGTCATCTTAGTTCTTCAATCTACTATGGCGGTCAGGATATCTATACTGATCAAAATCCGGGAACTGGGTTCAACTCTTCTGTGAGTGTTGCATTATTTTCTGTCAAAATTATCCGTTGTTTGTTCTGA

Protein sequence

MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVSYSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFNSSVSVALFSVKIIRCLF

Homology

[Close]

BLAST of IVF0010859.1 vs. ExPASy TrEMBL
Match: A0A1S3B5B7 (uncharacterized protein LOC103486348 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486348 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.9e-58
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120

Query: 121 SSV 124
           SS+
Sbjct: 121 SSL 123

[Close]

BLAST of IVF0010859.1 vs. ExPASy TrEMBL
Match: A0A5D3DN19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001290 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.9e-58
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120

Query: 121 SSV 124
           SS+
Sbjct: 121 SSL 123

[Close]

BLAST of IVF0010859.1 vs. ExPASy TrEMBL
Match: A0A1S3B5T7 (uncharacterized protein LOC103486348 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486348 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKT GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKT-GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120

Query: 121 SSV 124
           SS+
Sbjct: 121 SSL 122

[Close]

BLAST of IVF0010859.1 vs. ExPASy TrEMBL
Match: A0A1S4DUN5 (uncharacterized protein LOC103486348 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486348 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55
Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK   NSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK---NSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120

Query: 121 SSV 124
           SS+
Sbjct: 121 SSL 120

[Close]

BLAST of IVF0010859.1 vs. ExPASy TrEMBL
Match: A0A1S4DUM2 (uncharacterized protein LOC103486348 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103486348 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK   NSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK---NSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKT GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKT-GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 119

Query: 121 SSV 124
           SS+
Sbjct: 121 SSL 119

[Close]

BLAST of IVF0010859.1 vs. NCBI nr
Match: XP_008442495.1 (PREDICTED: uncharacterized protein LOC103486348 isoform X1 [Cucumis melo] >XP_008442496.1 PREDICTED: uncharacterized protein LOC103486348 isoform X1 [Cucumis melo] >KAA0044127.1 uncharacterized protein E6C27_scaffold236G004800 [Cucumis melo var. makuwa] >TYK25011.1 uncharacterized protein E5676_scaffold352G001290 [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (599), Expect = 4.03e-77
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120

Query: 121 SSV 123
           SS+
Sbjct: 121 SSL 123

[Close]

BLAST of IVF0010859.1 vs. NCBI nr
Match: XP_008442497.1 (PREDICTED: uncharacterized protein LOC103486348 isoform X2 [Cucumis melo])

HSP 1 Score: 228 bits (582), Expect = 1.52e-74
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKT GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKT-GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120

Query: 121 SSV 123
           SS+
Sbjct: 121 SSL 122

[Close]

BLAST of IVF0010859.1 vs. NCBI nr
Match: XP_016899678.1 (PREDICTED: uncharacterized protein LOC103486348 isoform X3 [Cucumis melo])

HSP 1 Score: 225 bits (573), Expect = 3.35e-73
Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK   NSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK---NSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120

Query: 121 SSV 123
           SS+
Sbjct: 121 SSL 120

[Close]

BLAST of IVF0010859.1 vs. NCBI nr
Match: XP_016899679.1 (PREDICTED: uncharacterized protein LOC103486348 isoform X4 [Cucumis melo])

HSP 1 Score: 218 bits (556), Expect = 1.26e-70
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK   NSEVGGKSHAVS
Sbjct: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFK---NSEVGGKSHAVS 60

Query: 61  YSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 120
           YSPKT GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN
Sbjct: 61  YSPKT-GSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGFN 119

Query: 121 SSV 123
           SS+
Sbjct: 121 SSL 119

[Close]

BLAST of IVF0010859.1 vs. NCBI nr
Match: XP_004137753.1 (uncharacterized protein LOC101220657 isoform X1 [Cucumis sativus] >KGN58824.1 hypothetical protein Csa_002437 [Cucumis sativus])

HSP 1 Score: 192 bits (488), Expect = 3.08e-60
Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKAS-QNSEVGGKSHAV 60
           MSEKK SD SSFSFTSDLFGIRDTSSLSSNHIFGPVFSSS   FK S Q+SEVGGKS A+
Sbjct: 1   MSEKKPSDASSFSFTSDLFGIRDTSSLSSNHIFGPVFSSS---FKPSGQHSEVGGKSPAL 60

Query: 61  SYSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGTGF 120
           SY PKTEG+SKYKECKNGSTSSRE+GSFYQEQRTNPCHLSSSIYYGGQD+YT QNP TGF
Sbjct: 61  SYFPKTEGNSKYKECKNGSTSSREMGSFYQEQRTNPCHLSSSIYYGGQDVYT-QNPATGF 118

[Close]

BLAST of IVF0010859.1 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 50.8 bits (120), Expect = 9.9e-07
Identity = 48/130 (36.92%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 3   EKKASDG---SSFSFTSDLFGIRDT-SSLSSNHIFGPVFSSSSSSF---KASQNSEVGGK 62
           +KKAS     SS S TS+LFG R+  SS SS+ I G +F   S         Q +  GG 
Sbjct: 5   KKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETVTGG- 64

Query: 63  SHAVSYSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNP 122
                ++ KT  +    + +N          + Q+QR  PCHLSSSIYYGG D+Y     
Sbjct: 65  ----CWNEKTSKTGGNVD-RNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQPQN 124

Query: 123 GTGFNSSVSV 126
            T  NS+V +
Sbjct: 125 STS-NSTVII 127

[Close]

BLAST of IVF0010859.1 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.9e-06
Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 24  TSSLSS-NHIFGPVFSSSSSS---------FKASQNSEVGGKSHAVSYSPKTEGSSKYK- 83
           +SSLSS +HIFGP  SSSSSS         F      ++G +    S      G  KY+ 
Sbjct: 17  SSSLSSFDHIFGPRVSSSSSSSATGLFKSIFPPPSADQLGRQVDFASQG----GHVKYQS 76

Query: 84  -ECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIYTDQNPGT 118
              K   ++ +E  S+Y E+   PCHLSSS+YYGGQ+ Y+     T
Sbjct: 77  PNAKGERSNKKEKKSYYNEETEPPCHLSSSLYYGGQETYSSTTTTT 118

[Close]

BLAST of IVF0010859.1 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.9e-06
Identity = 40/107 (37.38%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 6   ASDGSSFSFTSDLFGIRDTS-SLSSNHIFGPVF-SSSSSSFKASQNSEVGGKSHAVSYSP 65
           +S  +S SFT++LFG +D S   SS+ IF  +F   S  S +   NS             
Sbjct: 9   SSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPSKGSARDGSNS------------- 68

Query: 66  KTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIY 111
                      K+GS + R      QE R  PCHLSSS+YYGGQD+Y
Sbjct: 69  -----------KHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVY 91

[Close]

BLAST of IVF0010859.1 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06
Identity = 44/115 (38.26%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 3   EKKASDG---SSFSFTSDLFGIRDT-SSLSSNHIFGPVFSSSSSSF---KASQNSEVGGK 62
           +KKAS     SS S TS+LFG R+  SS SS+ I G +F   S         Q +  GG 
Sbjct: 5   KKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETVTGG- 64

Query: 63  SHAVSYSPKTEGSSKYKECKNGSTSSREVGSFYQEQRTNPCHLSSSIYYGGQDIY 111
                ++ KT  +    + +N          + Q+QR  PCHLSSSIYYGG D+Y
Sbjct: 65  ----CWNEKTSKTGGNVD-RNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVY 113

[Close]

BLAST of IVF0010859.1 vs. TAIR 10
Match: AT2G39855.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04
Identity = 44/120 (36.67%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 1   MSEKKASDGSSFSFTSDLFGIRDTSSLSSNHIFGPVFSSSSSSFKASQNSEVGGKSHAVS 60
           M +KK+  GSS S           SS S +HIFGP  S S SS        +     AV+
Sbjct: 1   MDKKKSVSGSSSS-----------SSSSLDHIFGPRVSHSYSSSTTGLFKSIFPPPSAVT 60

Query: 61  YSPKT--EGSSKYKEC------KNGSTSSREVGSFYQEQRTN-PCHLSSSIYYGGQDIYT 112
               T   G++KY+        + G  S  +    YQ + T  PC+LSSSIYYGGQD Y+
Sbjct: 61  QGNLTSRNGAAKYQPTNFETPNERGERSKNKERKSYQSEETQPPCNLSSSIYYGGQDNYS 109

The following BLAST results are available for this feature:

BLAST of IVF0010859.1 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0010859.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B5B7	1.9e-58	99.19	uncharacterized protein LOC103486348 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DN19	1.9e-58	99.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B5T7	1.4e-56	98.37	uncharacterized protein LOC103486348 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DUN5	2.0e-55	96.75	uncharacterized protein LOC103486348 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DUM2	1.4e-53	95.93	uncharacterized protein LOC103486348 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of IVF0010859.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442495.1	4.03e-77	99.19	PREDICTED: uncharacterized protein LOC103486348 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_008442497.1	1.52e-74	98.37	PREDICTED: uncharacterized protein LOC103486348 isoform X2 [Cucumis melo]	[more]
XP_016899678.1	3.35e-73	96.75	PREDICTED: uncharacterized protein LOC103486348 isoform X3 [Cucumis melo]	[more]
XP_016899679.1	1.26e-70	95.93	PREDICTED: uncharacterized protein LOC103486348 isoform X4 [Cucumis melo]	[more]
XP_004137753.1	3.08e-60	86.89	uncharacterized protein LOC101220657 isoform X1 [Cucumis sativus] >KGN58824.1 hy...	[more]

BLAST of IVF0010859.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02020.2	9.9e-07	36.92	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT3G55646.1	2.9e-06	38.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G59080.1	2.9e-06	37.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G02020.1	3.8e-06	38.26	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT2G39855.1	2.1e-04	36.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..82
None	No IPR available	PANTHER	PTHR33738:SF1	PLANT/T7H20-70 PROTEIN	coord: 1..114
None	No IPR available	PANTHER	PTHR33738	EMB\|CAB82975.1	coord: 1..114

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0010859	IVF0010859	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0010859.1-exon	IVF0010859.1-exon-chr04:31485045..31485179	exon
IVF0010859.1-exon	IVF0010859.1-exon-chr04:31485299..31485359	exon
IVF0010859.1-exon	IVF0010859.1-exon-chr04:31485465..31485766	exon
IVF0010859.1-exon	IVF0010859.1-exon-chr04:31485881..31486497	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0010859.1-cds	IVF0010859.1-cds-chr04:31485045..31485179	CDS
IVF0010859.1-cds	IVF0010859.1-cds-chr04:31485299..31485359	CDS
IVF0010859.1-cds	IVF0010859.1-cds-chr04:31485465..31485682	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0010859.1-three_prime_utr	IVF0010859.1-three_prime_utr-chr04:31485683..31485766	three_prime_UTR
IVF0010859.1-three_prime_utr	IVF0010859.1-three_prime_utr-chr04:31485881..31486497	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0010859.1	IVF0010859.1-protein	polypeptide