Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCACTCAATGGAAGTCATAAATCCATACACATTTGGCCTTGTCAACCCTCTAATTTCCAATATGAGTTCTTGTGGATCACAACAAATCAAGAAAAATGCAATCAATCTTTGCATTAGGCTTCTCCCACTCTCTCCAATTTCCCCATTCCCATTCCCATTCCTATTTTCACTCCAACTCCAGAATTTCTCTGCAAAACCTCACTGCACCAGCCATGGAAGCAACAAGTCCAGACCAACCCTCTCTCTTAGAACCACTTGGCCTTCCATCTCCATCTCCCTCTTCGCCTCTGGCTTTCTCTTAGGCCCTCTTCTCGATGGACTCCATTCTCGCGTCAATCTCGTCGTTTATCGAACAGGATCCATCCACATCGGCCCTCTCCACACTAACATCTGGGTAACATTTTTAATCTCCATTCTAGAACCCTAATGGTTCCCGGAACTTTTTCTTTTTTTTCCTTTCCATAGGGCACTTGATGATTGAATCTGAATGAATGCTGTTAGGTTCCTTTCTTGCTGGGATTGTTTTACTGTACAGTTGGTTTGATTCAACTCTACTTAGATGAGAAATTTTCGCCAAAACAATCACAGGGGAGCTTGCGGAAAACGGTGGCTTCCTTAATGTGAGTGTTCTTTTTCATTGGATTTCTTTGAAGAAAGTGTTGCTTGTTTGATTCATATGTATGTATTGTTTGACCAGAGCACTGGGCTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCCGATAATATTGAGGCGTATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCGTTGCTTGATAGTTCTTTGCTTGGATTCTCACTGGCTTGTGTTCTTGGCCTTGGTTGCCCTCTGGCTGAGATTCCCATTATGAAGTATGTGAACCTCATCCTTTTCAATTCATATACTAATAGATTATCATAGGTATTGGTTGATTGTATTATTTTAGTCCTCGAGCTCTCTCATGTGATGATCTGTAGGCAGAATTTAGTTCCCTTGTGCTAGAAGTTTAGTTATTAGCGAGAAACAGTTGCAGAAGTTAGTTCTCTAATGTTCCTATACTAGTAGTTTATGATAGGTATGGGTATTGGTTTGTTTAAATTTTAAATCATAATTATAGATTTTCGTTGTTGTACATTCTTATGTGATGATTCCTATGCAGAAGTTAGTTCCCTAATGTTAGAAGTTTAGTTGTTGGTGAGACATAGGAATGAGTTTATACTTGGACATATATTTGAGTTTGGAGAGTGGTTTATCTAATCTACCTTATTCACTTGGCCTAACCTCAAATACACAAGTTGGTAATTGATGAGATTGTAAATGATAATTTGAATGTCAAGAATTTAGGCTCTATTTCCTAACTATTTATTTTTTATTTTTTGATTTTTCAAAGATTTAAGTATATAAACACTATTTCCACGAAGATTGAAACTTCATGGGACTTTTATAAAAAGAACATTCAACCATTTGCAACTAACATGTTTAGGTACCGCGGATTTTACCATAGAAACCAATTATAGTTCACTCAAGTCAGTTTACGGAAAATCAGTGAGGTGTTCAACTGACAATTGATTCGCAAACGAAAATTTCCACTTGGATTCTGTTCTTTTGCTAACACAATGCTACTCTACTTCTTGATGTAATGCTTGTGCAGGTTCTTCCATCTTTGGGAATATCCCAAAGCCAACATAGAGATATTTGGTGAAGTAAGTGATGAAAATCAAAGACCAGAAAGTGATGGGAAAGTGCAAGAATTCTTTCCAAGATTTTTTCTTAAGCTTGCATTTGTGTAATACAGGGGATAATCAGCTGGACGGTCACTTGCTATTTTGTGTACACTCCATTCTTGATTAATCTATCAAGATGGCTCAAGTCCGTGGTGGATGCTGATGCTGCTGCTGCTGCTGTAAATGAAGATGGATCTGGATAGCCAAATAGATGGGAAGGATGGAACTGGAAAGGTACACTTGCCTTTATAACCTTTTTGATTTTTTACTTATAAACACTGCTATTCATAAATCTCTTTGCTTTATATACCGTACCGTCTCTTTTGTAGTTTTCAAAATTCAGATTCAGTTTTATAATATATGGTATAAAATGGAACATAAATTTAAGTAACGTGATACGGAACAAAATGTTGTCAAAGGAAACTTAAATAATTGATTTTGATTCTTATTTATCATTGTTTGTTTAGAAAATTTTTACACTTTTAAAAGATGGCGTTTGGTTACAAGTTGGAATCTCTGGATGCTCATTTCCAGGTAGGATCTTGCCTCTAGCGGGGGGGATAAACGAGAAGGGAGTAGGAGAAAATTTTTTCTTTGTAGTAAACATTAATCATTCTCATCTCTACCCACCTCTTTATTAATTTATTGTTATTATTGTGTTTTGTATGTGTATATATATAGTTCCAAGATTGATTGTTTAGGGACCAGGATAATATGTATGTTCTAATTACATGGTCAAACATTTACCCC
mRNA sequence
GTCACTCAATGGAAGTCATAAATCCATACACATTTGGCCTTGTCAACCCTCTAATTTCCAATATGAGTTCTTGTGGATCACAACAAATCAAGAAAAATGCAATCAATCTTTGCATTAGGCTTCTCCCACTCTCTCCAATTTCCCCATTCCCATTCCCATTCCTATTTTCACTCCAACTCCAGAATTTCTCTGCAAAACCTCACTGCACCAGCCATGGAAGCAACAAGTCCAGACCAACCCTCTCTCTTAGAACCACTTGGCCTTCCATCTCCATCTCCCTCTTCGCCTCTGGCTTTCTCTTAGGCCCTCTTCTCGATGGACTCCATTCTCGCGTCAATCTCGTCGTTTATCGAACAGGATCCATCCACATCGGCCCTCTCCACACTAACATCTGGGTTCCTTTCTTGCTGGGATTGTTTTACTGTACAGTTGGTTTGATTCAACTCTACTTAGATGAGAAATTTTCGCCAAAACAATCACAGGGGAGCTTGCGGAAAACGGTGGCTTCCTTAATAGCACTGGGCTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCCGATAATATTGAGGCGTATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCGTTGCTTGATAGTTCTTTGCTTGGATTCTCACTGGCTTGTGTTCTTGGCCTTGGTTGCCCTCTGGCTGAGATTCCCATTATGAAGTTCTTCCATCTTTGGGAATATCCCAAAGCCAACATAGAGATATTTGGTGAAGGGATAATCAGCTGGACGGTCACTTGCTATTTTGTGTACACTCCATTCTTGATTAATCTATCAAGATGGCTCAAGTCCGTGGTGGATGCTGATGCTGCTGCTGCTGCTGTAAATGAAGATGGATCTGGATAGCCAAATAGATGGGAAGGATGGAACTGGAAAGGTACACTTGCCTTTATAACCTTTTTGATTTTTTACTTATAAACACTGCTATTCATAAATCTCTTTGCTTTATATACCGTACCGTCTCTTTTGTAGTTTTCAAAATTCAGATTCAGTTTTATAATATATGGTATAAAATGGAACATAAATTTAAGTAACGTGATACGGAACAAAATGTTGTCAAAGGAAACTTAAATAATTGATTTTGATTCTTATTTATCATTGTTTGTTTAGAAAATTTTTACACTTTTAAAAGATGGCGTTTGGTTACAAGTTGGAATCTCTGGATGCTCATTTCCAGGTAGGATCTTGCCTCTAGCGGGGGGGATAAACGAGAAGGGAGTAGGAGAAAATTTTTTCTTTGTAGTAAACATTAATCATTCTCATCTCTACCCACCTCTTTATTAATTTATTGTTATTATTGTGTTTTGTATGTGTATATATATAGTTCCAAGATTGATTGTTTAGGGACCAGGATAATATGTATGTTCTAATTACATGGTCAAACATTTACCCC
Coding sequence (CDS)
ATGGAAGTCATAAATCCATACACATTTGGCCTTGTCAACCCTCTAATTTCCAATATGAGTTCTTGTGGATCACAACAAATCAAGAAAAATGCAATCAATCTTTGCATTAGGCTTCTCCCACTCTCTCCAATTTCCCCATTCCCATTCCCATTCCTATTTTCACTCCAACTCCAGAATTTCTCTGCAAAACCTCACTGCACCAGCCATGGAAGCAACAAGTCCAGACCAACCCTCTCTCTTAGAACCACTTGGCCTTCCATCTCCATCTCCCTCTTCGCCTCTGGCTTTCTCTTAGGCCCTCTTCTCGATGGACTCCATTCTCGCGTCAATCTCGTCGTTTATCGAACAGGATCCATCCACATCGGCCCTCTCCACACTAACATCTGGGTTCCTTTCTTGCTGGGATTGTTTTACTGTACAGTTGGTTTGATTCAACTCTACTTAGATGAGAAATTTTCGCCAAAACAATCACAGGGGAGCTTGCGGAAAACGGTGGCTTCCTTAATAGCACTGGGCTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCCGATAATATTGAGGCGTATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCGTTGCTTGATAGTTCTTTGCTTGGATTCTCACTGGCTTGTGTTCTTGGCCTTGGTTGCCCTCTGGCTGAGATTCCCATTATGAAGTTCTTCCATCTTTGGGAATATCCCAAAGCCAACATAGAGATATTTGGTGAAGGGATAATCAGCTGGACGGTCACTTGCTATTTTGTGTACACTCCATTCTTGATTAATCTATCAAGATGGCTCAAGTCCGTGGTGGATGCTGATGCTGCTGCTGCTGCTGTAAATGAAGATGGATCTGGATAG
Protein sequence
MEVINPYTFGLVNPLISNMSSCGSQQIKKNAINLCIRLLPLSPISPFPFPFLFSLQLQNFSAKPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG
Homology
BLAST of IVF0009419.2 vs. ExPASy TrEMBL
Match:
A0A1S3BI47 (uncharacterized protein LOC103489906 OS=Cucumis melo OX=3656 GN=LOC103489906 PE=4 SV=1)
HSP 1 Score: 465.3 bits (1196), Expect = 1.9e-127
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
Query: 63 KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 122
KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG
Sbjct: 34 KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 93
Query: 123 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY 182
PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY
Sbjct: 94 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY 153
Query: 183 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 242
KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA
Sbjct: 154 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 213
Query: 243 NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG 293
NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG
Sbjct: 214 NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG 263
BLAST of IVF0009419.2 vs. ExPASy TrEMBL
Match:
A0A0A0LBT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535110 PE=4 SV=1)
HSP 1 Score: 431.0 bits (1107), Expect = 3.9e-117
Identity = 217/230 (94.35%), Postives = 220/230 (95.65%), Query Frame = 0
Query: 63 KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 122
KPHC+SHGS K R +LSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG
Sbjct: 32 KPHCSSHGSKKPRISLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 91
Query: 123 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY 182
PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFS KQSQGSL KTVASLIALGLFIELSAEMY
Sbjct: 92 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSLKQSQGSLGKTVASLIALGLFIELSAEMY 151
Query: 183 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 242
KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA
Sbjct: 152 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 211
Query: 243 NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG 293
NI+IFGEGIISWTVTCYFVYTPFLINLSRWLKSVVD AAAVNED SG
Sbjct: 212 NIDIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVD----AAAVNEDESG 257
BLAST of IVF0009419.2 vs. ExPASy TrEMBL
Match:
A0A5A7T7D1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003370 PE=4 SV=1)
HSP 1 Score: 393.7 bits (1010), Expect = 6.9e-106
Identity = 194/195 (99.49%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 98 LGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS 157
+GPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS
Sbjct: 41 MGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS 100
Query: 158 QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC 217
QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC
Sbjct: 101 QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC 160
Query: 218 VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV 277
VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV
Sbjct: 161 VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV 220
Query: 278 DADAAAAAVNEDGSG 293
DADAAAAAVNEDGSG
Sbjct: 221 DADAAAAAVNEDGSG 235
BLAST of IVF0009419.2 vs. ExPASy TrEMBL
Match:
A0A5D3DA85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00650 PE=4 SV=1)
HSP 1 Score: 393.3 bits (1009), Expect = 9.0e-106
Identity = 204/244 (83.61%), Postives = 209/244 (85.66%), Query Frame = 0
Query: 51 FLFSLQLQNFSAKPHCTSHG-SN-KSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSR 110
F S Q S K H SN K+ L ++ + +GPLLDGLHSR
Sbjct: 12 FSVSFQFYRMSPKGRLLEHAYSNLKNEMQSKLNDVGQKAAVERQVNDNPMGPLLDGLHSR 71
Query: 111 VNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASL 170
VNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASL
Sbjct: 72 VNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASL 131
Query: 171 IALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEI 230
IALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEI
Sbjct: 132 IALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEI 191
Query: 231 PIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNE 290
PIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNE
Sbjct: 192 PIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNE 251
Query: 291 DGSG 293
DGSG
Sbjct: 252 DGSG 255
BLAST of IVF0009419.2 vs. ExPASy TrEMBL
Match:
A0A6J1DRY1 (uncharacterized protein LOC111023831 OS=Momordica charantia OX=3673 GN=LOC111023831 PE=4 SV=1)
HSP 1 Score: 381.7 bits (979), Expect = 2.7e-102
Identity = 191/229 (83.41%), Postives = 204/229 (89.08%), Query Frame = 0
Query: 63 KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 122
KP C SHGS R +LSLRTTWPSISI+LF SGFLLGPLLDGLHSRVNLVVY+TGSI +G
Sbjct: 30 KPRC-SHGSESRRTSLSLRTTWPSISIALFGSGFLLGPLLDGLHSRVNLVVYQTGSIDVG 89
Query: 123 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY 182
PLHTNIWVPFLLGLFY TVGL+QLY+DE FS S+GSL +TVASLIAL LFIELSAEMY
Sbjct: 90 PLHTNIWVPFLLGLFYSTVGLMQLYIDENFSRNSSEGSLGRTVASLIALALFIELSAEMY 149
Query: 183 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 242
KAGVADNIEAYALFAGAE IWA LDSSLLGFSLACV+GLGCPLAEIPIMKFFHLW YP+A
Sbjct: 150 KAGVADNIEAYALFAGAELIWAFLDSSLLGFSLACVVGLGCPLAEIPIMKFFHLWSYPQA 209
Query: 243 NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGS 292
N+EIFGEGIISW +TCYFVYTPFLINLSRWLKSVVD AAAV +D S
Sbjct: 210 NVEIFGEGIISWIITCYFVYTPFLINLSRWLKSVVD----AAAVKKDES 253
BLAST of IVF0009419.2 vs. NCBI nr
Match:
XP_008447464.1 (PREDICTED: uncharacterized protein LOC103489906 [Cucumis melo] >XP_008447465.1 PREDICTED: uncharacterized protein LOC103489906 [Cucumis melo])
HSP 1 Score: 469 bits (1207), Expect = 2.65e-165
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
Query: 63 KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 122
KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG
Sbjct: 34 KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 93
Query: 123 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY 182
PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY
Sbjct: 94 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY 153
Query: 183 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 242
KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA
Sbjct: 154 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 213
Query: 243 NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG 292
NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG
Sbjct: 214 NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG 263
BLAST of IVF0009419.2 vs. NCBI nr
Match:
XP_004150901.1 (uncharacterized protein LOC101205226 [Cucumis sativus] >XP_031739074.1 uncharacterized protein LOC101205226 [Cucumis sativus] >XP_031739075.1 uncharacterized protein LOC101205226 [Cucumis sativus] >KGN58127.1 hypothetical protein Csa_017408 [Cucumis sativus])
HSP 1 Score: 434 bits (1117), Expect = 1.09e-151
Identity = 217/230 (94.35%), Postives = 220/230 (95.65%), Query Frame = 0
Query: 63 KPHCTSHGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 122
KPHC+SHGS K R +LSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG
Sbjct: 32 KPHCSSHGSKKPRISLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIG 91
Query: 123 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMY 182
PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFS KQSQGSL KTVASLIALGLFIELSAEMY
Sbjct: 92 PLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSLKQSQGSLGKTVASLIALGLFIELSAEMY 151
Query: 183 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 242
KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA
Sbjct: 152 KAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKA 211
Query: 243 NIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGSG 292
NI+IFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDA AAVNED SG
Sbjct: 212 NIDIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDA----AAVNEDESG 257
BLAST of IVF0009419.2 vs. NCBI nr
Match:
XP_038904924.1 (uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904925.1 uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904926.1 uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904927.1 uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904928.1 uncharacterized protein LOC120091134 [Benincasa hispida])
HSP 1 Score: 414 bits (1065), Expect = 1.16e-143
Identity = 204/231 (88.31%), Postives = 215/231 (93.07%), Query Frame = 0
Query: 63 KPHCTS--HGSNKSRPTLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIH 122
KPHCTS HGS ++R +LSLRTTWPSISI+LF SGFLLGPLLDGLHSRVNLVVYRTGSIH
Sbjct: 37 KPHCTSSSHGSRRARTSLSLRTTWPSISIALFGSGFLLGPLLDGLHSRVNLVVYRTGSIH 96
Query: 123 IGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAE 182
IGPLHTNIWVPFLLGLFYC+VGLIQLYLDE FSP++S+G +TVASLIALGLFIELSAE
Sbjct: 97 IGPLHTNIWVPFLLGLFYCSVGLIQLYLDENFSPRKSEGCFGRTVASLIALGLFIELSAE 156
Query: 183 MYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYP 242
MYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGL CPLAEIPIMKFFHLW YP
Sbjct: 157 MYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLVCPLAEIPIMKFFHLWYYP 216
Query: 243 KANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVVDADAAAAAVNEDGS 291
KANIEIFGEGI+SWT+TCYFVYTPFLINLSRWLKSVVDA AA NEDGS
Sbjct: 217 KANIEIFGEGIVSWTITCYFVYTPFLINLSRWLKSVVDA----AAANEDGS 263
BLAST of IVF0009419.2 vs. NCBI nr
Match:
KAA0038116.1 (uncharacterized protein E6C27_scaffold36G003370 [Cucumis melo var. makuwa])
HSP 1 Score: 397 bits (1021), Expect = 2.04e-137
Identity = 194/195 (99.49%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 98 LGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS 157
+GPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS
Sbjct: 41 MGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS 100
Query: 158 QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC 217
QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC
Sbjct: 101 QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC 160
Query: 218 VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV 277
VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV
Sbjct: 161 VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV 220
Query: 278 DADAAAAAVNEDGSG 292
DADAAAAAVNEDGSG
Sbjct: 221 DADAAAAAVNEDGSG 235
BLAST of IVF0009419.2 vs. NCBI nr
Match:
TYK20491.1 (uncharacterized protein E5676_scaffold237G00650 [Cucumis melo var. makuwa])
HSP 1 Score: 397 bits (1021), Expect = 4.17e-137
Identity = 194/195 (99.49%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 98 LGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS 157
+GPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS
Sbjct: 61 MGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSPKQS 120
Query: 158 QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC 217
QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC
Sbjct: 121 QGSLRKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLAC 180
Query: 218 VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV 277
VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV
Sbjct: 181 VLGLGCPLAEIPIMKFFHLWEYPKANIEIFGEGIISWTVTCYFVYTPFLINLSRWLKSVV 240
Query: 278 DADAAAAAVNEDGSG 292
DADAAAAAVNEDGSG
Sbjct: 241 DADAAAAAVNEDGSG 255
BLAST of IVF0009419.2 vs. TAIR 10
Match:
AT4G01935.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )
HSP 1 Score: 293.1 bits (749), Expect = 2.4e-79
Identity = 140/209 (66.99%), Postives = 172/209 (82.30%), Query Frame = 0
Query: 71 SNKSRPTLSLRTTW-PSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIW 130
S + + S +W +S+SLF SGF+LGPLLDG+HSRV+LVVY+ G+ IGPLHTNIW
Sbjct: 34 SQRKQSKTSTGKSWIVPVSLSLFGSGFVLGPLLDGIHSRVDLVVYQNGAFQIGPLHTNIW 93
Query: 131 VPFLLGLFYCTVGLIQLYLDEKFSPKQSQGSLRKTVASLIALGLFIELSAEMYKAGVADN 190
VPFLLGLFYCTVGL+QL LDE S +GSL KTV SL+AL F+ELSAEMYKAGV+DN
Sbjct: 94 VPFLLGLFYCTVGLLQLLLDETTSASPPRGSLDKTVISLLALMFFLELSAEMYKAGVSDN 153
Query: 191 IEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKFFHLWEYPKANIEIFGE 250
IEAY LFA AEFIW LD + + F++A +LG+ CPLAEIPIM+FFHLW YP+ANIEIFG+
Sbjct: 154 IEAYILFALAEFIWFSLDRTWICFTIATLLGVACPLAEIPIMQFFHLWYYPEANIEIFGQ 213
Query: 251 GIISWTVTCYFVYTPFLINLSRWLKSVVD 279
G+++WT TCYFVYTPFLINL+RWL++V++
Sbjct: 214 GLVTWTTTCYFVYTPFLINLARWLRTVME 242
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BI47 | 1.9e-127 | 100.00 | uncharacterized protein LOC103489906 OS=Cucumis melo OX=3656 GN=LOC103489906 PE=... | [more] |
A0A0A0LBT1 | 3.9e-117 | 94.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535110 PE=4 SV=1 | [more] |
A0A5A7T7D1 | 6.9e-106 | 99.49 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DA85 | 9.0e-106 | 83.61 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1DRY1 | 2.7e-102 | 83.41 | uncharacterized protein LOC111023831 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |
XP_008447464.1 | 2.65e-165 | 100.00 | PREDICTED: uncharacterized protein LOC103489906 [Cucumis melo] >XP_008447465.1 P... | [more] |
XP_004150901.1 | 1.09e-151 | 94.35 | uncharacterized protein LOC101205226 [Cucumis sativus] >XP_031739074.1 uncharact... | [more] |
XP_038904924.1 | 1.16e-143 | 88.31 | uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904925.1 unchara... | [more] |
KAA0038116.1 | 2.04e-137 | 99.49 | uncharacterized protein E6C27_scaffold36G003370 [Cucumis melo var. makuwa] | [more] |
TYK20491.1 | 4.17e-137 | 99.49 | uncharacterized protein E5676_scaffold237G00650 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT4G01935.1 | 2.4e-79 | 66.99 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
IVF0009419 | IVF0009419 | gene |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0009419.2-five_prime_utr | IVF0009419.2-five_prime_utr-chr04:14041136..14041143 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0009419.2-exon | IVF0009419.2-exon-chr04:14041136..14041530 | exon |
IVF0009419.2-exon | IVF0009419.2-exon-chr04:14041638..14041756 | exon |
IVF0009419.2-exon | IVF0009419.2-exon-chr04:14041834..14042022 | exon |
IVF0009419.2-exon | IVF0009419.2-exon-chr04:14042802..14042853 | exon |
IVF0009419.2-exon | IVF0009419.2-exon-chr04:14042946..14043624 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0009419.2-cds | IVF0009419.2-cds-chr04:14041144..14041530 | CDS |
IVF0009419.2-cds | IVF0009419.2-cds-chr04:14041638..14041756 | CDS |
IVF0009419.2-cds | IVF0009419.2-cds-chr04:14041834..14042022 | CDS |
IVF0009419.2-cds | IVF0009419.2-cds-chr04:14042802..14042853 | CDS |
IVF0009419.2-cds | IVF0009419.2-cds-chr04:14042946..14043077 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0009419.2-three_prime_utr | IVF0009419.2-three_prime_utr-chr04:14043078..14043624 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
IVF0009419.2 | IVF0009419.2-protein | polypeptide |