IVF0009035.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0009035.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Epidermal patterning factor-like protein
Location	chr04: 16496909 .. 16499564 (+)
Sequence length	2435
RNA-Seq Expression	IVF0009035.1
Synteny	IVF0009035.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTATGATCCTTCAAATTTTGCCGAAGAACTAAATGGAAAATCAGTTTCACAAACGATCTTTTCTCTGGGTTTTTTCATGGATTGCATGATACCCCGTTTTGTGTTTGAGGGTCGATTCCAGTGGCCGAAATTCTAAAGCTGGGTCTTGATGTTACCTAATCCAGAGCCGCTAAGGTTAATCGATATATGGTCAAAAAGAAGTAGCAGAAGAAGAAGAAGAAAAGTGAAAGAAAATGTAACAGATCGAATAATCAAATCACTCAAATCTCGCTGATATCAATAAGAAATCCCCAGACGATATTGAACAGGACAAACCTTACTTGAAAACGTACAATCGTTGCATTTGATGCTTAAAGTACCTTCTCTGCTTATCCATTTTCATCGATTTATTTTTGTCTGTATTTTTTTTTTCCCCACAAAGTTCTCTCATTTTTGCATTATACACATCCCCATCGAGCCGCTTAAACAGTGATTCAGTGCCCCTTTCTTTGTCCTTTCTAGTCAGAAAGACCACTAATTTGTGCCTGCCAACTGTTTGATAATTTCCCTCTGTGACTGTTTTAACCTAAGGCTTACTTCCCATGTTTTAACTTTGACATCATTCTATCACATTTCTCCTTATAAAGTCAAATAAGTTATTATACTTTCATTTGGGGTGTTAAGAACTGCTATCCTGAATCTTGGGTCTACCTGTAGAGAGAGAGACCTTTGATTAGTGCCTGCTATATGTTTTATGTTTTACTCGTGTGACAGTTTGAGCGTAAGACTTTGCTTCTAATGTTTTAAGTTTGATATTGTTCTTCACACTTTCCTAATAAAGTAAAAAAAAAGGATTAAATTATAATTTGGGGTGTTAAGAATTGCTATCATGAATATTGGGTGATAGAAAGAATATATGTCATGTAAGCTTGATTTATAGAGAATGTGGTGGTGACCGGGGGAAACAGGCAAACTTGAGTGTGATAGTTTGGGTGTGGATTAAATCTAACGTCATTTATTGCTTATAAATTGGGACCTTCCACAACCCAACGGCTCTTGATTGACCATCTTTGGTTATAAGGTAAATGGATGGCTGAGATTGGATTTAGAGCAGCATTCTATTATCTTCTCAACCTACTAATCTGTAAAAGGTTGACCCCATTTGAAGTACCTTATTTAATTTATTAACTAACTCAATAAAATTTTCTGCTGGGCTGAATGTGCTCAGAACCTCAGACATTGATGCCTTTTTCCTTCTTTTACATAAATAGCCCTCTGTCCCTGGATCTTTTCTTCTTTAAATAGGAATAAAACTATCAGAGTGAAATAAAGTCCCTGCAGTCTTGGTAGATGGTATTTTTCTTTTCCTTGTGAATATTTACATTGCTTCTGCAGGTATGACAGAACCTAGAAAAAAAAGGGGTGGCTGTTCTGCTGGGCCCTGCCCTTGTAAGGATCTCTGTATGGTTCATTTAGTGGACTGATTTGGCAGTGAGTGAAAGAGAGAGGCTGGATCGTATTGAAAGGCGACAAAATCAAAAAAAGAAGAAGAAGAAAAAGGGGATTTCTACAGCTCATTTCTTGCACTCTTGCAATTGTAAGGTTCTCTTCTCTATGTATCCATGGTGAGTTGTCAAATGATTTGAGTTGGAGTGGAGTGGAGGGACTTTGCTTTGCTTTTGTTCAGAACTCTTTGATAAGAAATTGGAATCGATCACTTGTTTCTAACGCAAAATCTCTCTGCCAGTCCTAAAGCTAGCCCTTGGAAGAGTAAGAAACCAAACAAAATAAAACAATATATATATGTATGTATAAAGATAGAGAGAAAGGCTCTGACTTCTTGTACGGGGAAATGTGAATTTGCTTGTTAGGATTAAATTTCCACCACCTTCTTATAACCCAAATCATTTTCCATTTTTTCCATTCACCATCTCTTTCCCACCGAAATCATCATTATCATTTTGGCTTTTGAAGACATGAAAGGAACATACTGGTGTTTTATATTCATTCTGCAATTAGTCTGTTGGGTTTCTGCTGCGGCCAGAACTTTTGCTCCAAATCCTGCCCTTCTTCCTCATAAACAAGGTTTGTTTCTTACCAATTATATAATCACATCTTCTCTTTGGCTTTCTCATCCCAATTATATTATTACATCTATTTAGCCATAGGTTTTCTTCTTCTTTCACCACCTTTTTAATTCAACTTGCTTGTTGTTTTGTTCCTGCCAGGTCTTATTGAGTCAAAACAGGTCAGCCCCCCCACCCTTTTTGTCACTTTATATGTGCTCTGTTTGGTGAAATAATTCATGTTTTTGGTCTGTATAAAGGCTGTTAAAGGTATTAAAGAAGAAGAATTCTATAGAGGGATGAGGAAAATAGGGTCAAGTCCCCCCAGCTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACAACCACCAACAGGCGCAGCCATATAGGGGTCCAATACACTAACTATGAACCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGATCCTAAATCTTAAGAGGAAAAAATAAATATGATAGAATAAAAAAAAAATAACCTTCCTTTTTGCCCCATCACTTGCTTTGCCTTTTCTGCATCATTTCCATCCCATCCCACTGTATAGTTCTTAATTCA

mRNA sequence

CTTTTATGATCCTTCAAATTTTGCCGAAGAACTAAATGGAAAATCAGTTTCACAAACGATCTTTTCTCTGGGTTTTTTCATGGATTGCATGATACCCCGTTTTGTGTTTGAGGGTCGATTCCAGTGGCCGAAATTCTAAAGCTGGGTCTTGATGTTACCTAATCCAGAGCCGCTAAGGTTAATCGATATATGGTCAAAAAGAAGTAGCAGAAGAAGAAGAAGAAAAGTGAAAGAAAATGTAACAGATCGAATAATCAAATCACTCAAATCTCGCTGATATCAATAAGAAATCCCCAGACGATATTGAACAGGACAAACCTTACTTGAAAACGTACAATCGTTGCATTTGATGCTTAAAGTACCTTCTCTGCTTATCCATTTTCATCGATTTATTTTTGTCTGTATTTTTTTTTTCCCCACAAAGTTCTCTCATTTTTGCATTATACACATCCCCATCGAGCCGCTTAAACAGTGATTCAGTGCCCCTTTCTTTGTCCTTTCTAGTCAGAAAGACCACTAATTTGTGCCTGCCAACTGTTTGATAATTTCCCTCTGTGACTGTTTTAACCTAAGGCTTACTTCCCATGTTTTAACTTTGACATCATTCTATCACATTTCTCCTTATAAAGTCAAATAAGTTATTATACTTTCATTTGGGGTGTTAAGAACTGCTATCCTGAATCTTGGGTCTACCTGTAGAGAGAGAGACCTTTGATTAGTGCCTGCTATATGTTTTATGTTTTACTCGTGTGACAGTTTGAGCGTAAGACTTTGCTTCTAATGTTTTAAGTTTGATATTGTTCTTCACACTTTCCTAATAAAGTAAAAAAAAAGGATTAAATTATAATTTGGGGTGTTAAGAATTGCTATCATGAATATTGGGTGATAGAAAGAATATATGTCATGTAAGCTTGATTTATAGAGAATGTGGTGGTGACCGGGGGAAACAGGCAAACTTGAGTGTGATAGTTTGGGTGTGGATTAAATCTAACGTCATTTATTGCTTATAAATTGGGACCTTCCACAACCCAACGGCTCTTGATTGACCATCTTTGGTTATAAGGTAAATGGATGGCTGAGATTGGATTTAGAGCAGCATTCTATTATCTTCTCAACCTACTAATCTGTAAAAGGTTGACCCCATTTGAAGTACCTTATTTAATTTATTAACTAACTCAATAAAATTTTCTGCTGGGCTGAATGTGCTCAGAACCTCAGACATTGATGCCTTTTTCCTTCTTTTACATAAATAGCCCTCTGTCCCTGGATCTTTTCTTCTTTAAATAGGAATAAAACTATCAGAGTGAAATAAAGTCCCTGCAGTCTTGGTAGATGGTATTTTTCTTTTCCTTGTGAATATTTACATTGCTTCTGCAGGTATGACAGAACCTAGAAAAAAAAGGGGTGGCTGTTCTGCTGGGCCCTGCCCTTGTAAGGATCTCTGTATGGTTCATTTAGTGGACTGATTTGGCAGTGAGTGAAAGAGAGAGGCTGGATCGTATTGAAAGGCGACAAAATCAAAAAAAGAAGAAGAAGAAAAAGGGGATTTCTACAGCTCATTTCTTGCACTCTTGCAATTGTAAGGTTCTCTTCTCTATGTATCCATGGTGAGTTGTCAAATGATTTGAGTTGGAGTGGAGTGGAGGGACTTTGCTTTGCTTTTGTTCAGAACTCTTTGATAAGAAATTGGAATCGATCACTTGTTTCTAACGCAAAATCTCTCTGCCAGTCCTAAAGCTAGCCCTTGGAAGAGTAAGAAACCAAACAAAATAAAACAATATATATATGTATGTATAAAGATAGAGAGAAAGGCTCTGACTTCTTGTACGGGGAAATGTGAATTTGCTTGTTAGGATTAAATTTCCACCACCTTCTTATAACCCAAATCATTTTCCATTTTTTCCATTCACCATCTCTTTCCCACCGAAATCATCATTATCATTTTGGCTTTTGAAGACATGAAAGGAACATACTGGTGTTTTATATTCATTCTGCAATTAGTCTGTTGGGTTTCTGCTGCGGCCAGAACTTTTGCTCCAAATCCTGCCCTTCTTCCTCATAAACAAGGTCTTATTGAGTCAAAACAGGCTGTTAAAGGTATTAAAGAAGAAGAATTCTATAGAGGGATGAGGAAAATAGGGTCAAGTCCCCCCAGCTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACAACCACCAACAGGCGCAGCCATATAGGGGTCCAATACACTAACTATGAACCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGATCCTAAATCTTAAGAGGAAAAAATAAATATGATAGAATAAAAAAAAAATAACCTTCCTTTTTGCCCCATCACTTGCTTTGCCTTTTCTGCATCATTTCCATCCCATCCCACTGTATAGTTCTTAATTCA

Coding sequence (CDS)

ATGAAAGGAACATACTGGTGTTTTATATTCATTCTGCAATTAGTCTGTTGGGTTTCTGCTGCGGCCAGAACTTTTGCTCCAAATCCTGCCCTTCTTCCTCATAAACAAGGTCTTATTGAGTCAAAACAGGCTGTTAAAGGTATTAAAGAAGAAGAATTCTATAGAGGGATGAGGAAAATAGGGTCAAGTCCCCCCAGCTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACAACCACCAACAGGCGCAGCCATATAGGGGTCCAATACACTAACTATGAACCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGA

Protein sequence

MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP

Homology

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BLAST of IVF0009035.1 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-16
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 8   FIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKIGSSPPSC 67
           F F+  ++ ++   A    P  A    ++ ++   +      +EE  +  R+IGS PPSC
Sbjct: 11  FFFVFPIIIYI-GPAEIIKPQAAEENSRRRILNPNE-----NKEEIVKRRRRIGSKPPSC 70

Query: 68  EHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGP 111
           E KCYGC PCEAIQ PT ++   H+   Y NY+PEGW+C C P
Sbjct: 71  EKKCYGCEPCEAIQFPTISS-IPHLSPHYANYQPEGWRCHCPP 106

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BLAST of IVF0009035.1 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.2e-11
Identity = 31/76 (40.79%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 59  KIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGV-------------------QYTNY 116
           ++GS+PPSC ++C  C PC AIQVPT   R     V                   QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

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BLAST of IVF0009035.1 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-09
Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 49  KEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYT-NYEPEGWKCK 108
           KE E  R +R +GSSPP C  KC  C PC+ + VP         G   T  Y PE W+CK
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPP------GTPVTAEYYPEAWRCK 154

Query: 109 CGPSFYSP 116
           CG   Y P
Sbjct: 155 CGNKLYMP 156

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BLAST of IVF0009035.1 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-09
Identity = 32/76 (42.11%), Postives = 36/76 (47.37%), Query Frame = 0


Query: 60  IGSSPPSCEH-KCYGCIPCEAIQVPTTTNRRSHI-------------------GVQYTNY 116
           IGS PP CE  +C  C  CEAIQVPT    + H                    G   TNY
Sbjct: 53  IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNY 112

[Close]

BLAST of IVF0009035.1 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-06
Identity = 22/55 (40.00%), Postives = 28/55 (50.91%), Query Frame = 0


Query: 61  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 116
           GSSPP+C  KC  C PC+ + VP        +      Y PE W+CKCG   + P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPL-----EYYPEAWRCKCGNKLFMP 109

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BLAST of IVF0009035.1 vs. ExPASy TrEMBL
Match: A0A1S3BIS6 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 8.8e-65
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI 60
           MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI 60

Query: 61  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 116
           GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115

[Close]

BLAST of IVF0009035.1 vs. ExPASy TrEMBL
Match: A0A5D3BVF6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00550 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 8.8e-65
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI 60
           MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI 60

Query: 61  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 116
           GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115

[Close]

BLAST of IVF0009035.1 vs. ExPASy TrEMBL
Match: A0A6J1IUG9 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480029 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40
Identity = 89/122 (72.95%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MKGTY---WCFIFILQLVCWVSAAARTFAPNPALLPHKQG--LIESKQAVKG--IKEEEF 60
           MKGTY    CFI  LQL CWVSAA  TF    ALLPHKQ     +S +AV+   +KE E 
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKEGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 116
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSH+G+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCSPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]

BLAST of IVF0009035.1 vs. ExPASy TrEMBL
Match: A0A6J1DIF6 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111020335 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.6e-40
Identity = 86/123 (69.92%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MKGTYWCFIFILQLV--CWVSAAARTFAPNPA--LLPHKQGLI----ESKQAVKGIKEEE 60
           MKGT+ CFI  LQ+   CWVSAA R FAPN A  LLPHKQGLI    +SK+  + +    
Sbjct: 1   MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGLISGSFDSKEGFEAVN--- 60

Query: 61  FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSF 116
             RGMR+IGSSPPSC+HKCYGC PCEAIQVP TT+R SH+GVQYTNYEPEGWKCKCGPSF
Sbjct: 61  --RGMREIGSSPPSCQHKCYGCSPCEAIQVP-TTSRHSHLGVQYTNYEPEGWKCKCGPSF 117

[Close]

BLAST of IVF0009035.1 vs. ExPASy TrEMBL
Match: A0A6J1GTM4 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457464 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.8e-40
Identity = 88/122 (72.13%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 1   MKGTY---WCFIFILQLVCWVSAAARTFAPNPALLPHKQG--LIESKQAVKG--IKEEEF 60
           MKGTY    CFI  LQL CWVSAA  TF    ALLPHKQ     +S +AV+   +K  E 
Sbjct: 1   MKGTYRCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKGGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 116
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSH+G+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]

BLAST of IVF0009035.1 vs. NCBI nr
Match: XP_008447616.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447617.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447618.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >KAA0036717.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa] >TYK03693.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (654), Expect = 2.29e-86
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI 60
           MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKI 60

Query: 61  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115
           GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115

[Close]

BLAST of IVF0009035.1 vs. NCBI nr
Match: XP_004146810.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652342.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >KAE8651286.1 hypothetical protein Csa_001818 [Cucumis sativus])

HSP 1 Score: 245 bits (625), Expect = 6.31e-82
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQ-GLIESKQAVKGIKEEEFYRGMRK 60
           MKGTYWCFIFILQLVCWVSAAAR FAPNPAL PHKQ GLI+SKQAVKG+KEEEFYRGMRK
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRK 60

Query: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115
           IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSH+GVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 116

[Close]

BLAST of IVF0009035.1 vs. NCBI nr
Match: XP_038904354.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 223 bits (567), Expect = 5.08e-73
Identity = 100/120 (83.33%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHKQ-----GLIESKQAVKGIKEEEFYR 60
           MK TYWCFI ILQL CWVSAAARTFAPN ALLPHKQ     G ++SK+A KG+ EE FYR
Sbjct: 1   MKRTYWCFILILQLACWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAGKGVNEEAFYR 60

Query: 61  GMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115
           GMRKIGSSPPSCEHKCYGCIPCEAIQVPT TNR SH+GVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  GMRKIGSSPPSCEHKCYGCIPCEAIQVPTATNRHSHVGVQYTNYEPEGWKCKCGPSFYSP 120

[Close]

BLAST of IVF0009035.1 vs. NCBI nr
Match: XP_023526549.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177 bits (450), Expect = 3.20e-55
Identity = 90/122 (73.77%), Postives = 97/122 (79.51%), Query Frame = 0


Query: 1   MKGTYWC---FIFILQLVCWVSAAARTFAPNPALLPHKQ-GL-IESKQAVKG--IKEEEF 60
           MKGTY C   FI  LQL CWVSAA  TFA    LLPHKQ G  ++S +AV+   +KE E 
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTFA----LLPHKQQGFNVDSVKAVEEGVVKEGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 115
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT  NRRSH+G+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTN-NRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]

BLAST of IVF0009035.1 vs. NCBI nr
Match: XP_022980756.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima])

HSP 1 Score: 176 bits (446), Expect = 1.30e-54
Identity = 90/122 (73.77%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 1   MKGTYWC---FIFILQLVCWVSAAARTFAPNPALLPHKQ-GL-IESKQAVKG--IKEEEF 60
           MKGTY C   FI  LQL CWVSAA  TFA    LLPHKQ G   +S +AV+   +KE E 
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTFA----LLPHKQQGFNFDSVKAVEEGVVKEGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 115
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT  NRRSH+G+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCSPCEAIQVPTN-NRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]

BLAST of IVF0009035.1 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 85.5 bits (210), Expect = 3.0e-17
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 8   FIFILQLVCWVSAAARTFAPNPALLPHKQGLIESKQAVKGIKEEEFYRGMRKIGSSPPSC 67
           F F+  ++ ++   A    P  A    ++ ++   +      +EE  +  R+IGS PPSC
Sbjct: 11  FFFVFPIIIYI-GPAEIIKPQAAEENSRRRILNPNE-----NKEEIVKRRRRIGSKPPSC 70

Query: 68  EHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGP 111
           E KCYGC PCEAIQ PT ++   H+   Y NY+PEGW+C C P
Sbjct: 71  EKKCYGCEPCEAIQFPTISS-IPHLSPHYANYQPEGWRCHCPP 106

[Close]

BLAST of IVF0009035.1 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 6.6e-12
Identity = 31/76 (40.79%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 59  KIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGV-------------------QYTNY 116
           ++GS+PPSC ++C  C PC AIQVPT   R     V                   QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]

BLAST of IVF0009035.1 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-10
Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 49  KEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYT-NYEPEGWKCK 108
           KE E  R +R +GSSPP C  KC  C PC+ + VP         G   T  Y PE W+CK
Sbjct: 169 KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPP------GTPVTAEYYPEAWRCK 228

Query: 109 CGPSFYSP 116
           CG   Y P
Sbjct: 229 CGNKLYMP 230

[Close]

BLAST of IVF0009035.1 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-10
Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 49  KEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYT-NYEPEGWKCK 108
           KE E  R +R +GSSPP C  KC  C PC+ + VP         G   T  Y PE W+CK
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPP------GTPVTAEYYPEAWRCK 154

Query: 109 CGPSFYSP 116
           CG   Y P
Sbjct: 155 CGNKLYMP 156

[Close]

BLAST of IVF0009035.1 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 6.1e-10
Identity = 32/76 (42.11%), Postives = 36/76 (47.37%), Query Frame = 0


Query: 60  IGSSPPSCEH-KCYGCIPCEAIQVPTTTNRRSHI-------------------GVQYTNY 116
           IGS PP CE  +C  C  CEAIQVPT    + H                    G   TNY
Sbjct: 53  IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNY 112

The following BLAST results are available for this feature:

BLAST of IVF0009035.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C4B8C4	4.3e-16	38.83	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	9.2e-11	40.79	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	3.0e-09	44.12	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9T068	8.7e-09	42.11	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	1.8e-06	40.00	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of IVF0009035.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIS6	8.8e-65	100.00	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030...	[more]
A0A5D3BVF6	8.8e-65	100.00	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1IUG9	1.2e-40	72.95	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1DIF6	2.6e-40	69.92	Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1GTM4	5.8e-40	72.13	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of IVF0009035.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447616.1	2.29e-86	100.00	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_0084476...	[more]
XP_004146810.1	6.31e-82	94.83	EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPI...	[more]
XP_038904354.1	5.08e-73	83.33	EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida]	[more]
XP_023526549.1	3.20e-55	73.77	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022980756.1	1.30e-54	73.77	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]	[more]

BLAST of IVF0009035.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13898.1	3.0e-17	38.83	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT5G10310.1	6.6e-12	40.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30370.1	2.1e-10	44.12	allergen-related	[more]
AT2G30370.2	2.1e-10	44.12	allergen-related	[more]
AT4G37810.1	6.1e-10	42.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 59..115 e-value: 3.8E-21 score: 74.8
None	No IPR available	PANTHER	PTHR33109:SF14	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3	coord: 1..115
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 1..115

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0009035	IVF0009035	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009035.1-five_prime_utr	IVF0009035.1-five_prime_utr-chr04:16496909..16498866	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009035.1-exon	IVF0009035.1-exon-chr04:16496909..16498975	exon
IVF0009035.1-exon	IVF0009035.1-exon-chr04:16499119..16499138	exon
IVF0009035.1-exon	IVF0009035.1-exon-chr04:16499217..16499564	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009035.1-cds	IVF0009035.1-cds-chr04:16498867..16498975	CDS
IVF0009035.1-cds	IVF0009035.1-cds-chr04:16499119..16499138	CDS
IVF0009035.1-cds	IVF0009035.1-cds-chr04:16499217..16499435	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009035.1-three_prime_utr	IVF0009035.1-three_prime_utr-chr04:16499436..16499564	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0009035.1	IVF0009035.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010374	stomatal complex development
biological_process	GO:0010052	guard cell differentiation
cellular_component	GO:0005576	extracellular region