IVF0008512.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0008512.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	SNF1-related protein kinase regulatory subunit gamma-1-like
Location	chr11: 1218009 .. 1219173 (-)
Sequence length	633
RNA-Seq Expression	IVF0008512.1
Synteny	IVF0008512.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAATCAAATCAAACGCAATGCATTGCGATGGATTCCGCCACCGCTTTACAACGGTATCTTGATCACATCCCCGTCAGTTCCATCTCCGGCATCAAGTCCTCCGTCGGTAACCCTCCATTTCCTCTTTTTCCATCTCCTTGTGCACACAGCCTGTTTGTTTTTTATGTTTCATCGACCATATTTTTCCACTCAGTTTTGGAAGTCAAGACTGGGGACTTCGTTAAGGATGCAATACGAATAATGTTTAAGAAGAATGTGGCTTCTGCTCTCATCGCCGATGTCTCCACCGATGGTTTCCCTGATCGGTTTATTGGCTTTGTTCATCTCTCAAGCTTGCTTCTATGGTGTATTCAGGTACTTCCAATGAACTTTTTGTCTTCAAATATCTTCCATGGCTGAATTCTGATGATTCAGGAGATTCGAAAATTGGAGAATGAAATTGAGTGTATTGAGTCTGAGAAGACTAAAGAGACTGTTTGTGGGATTATGGGGTTTCTTGAACAGAATCCACACATTGGCCAAACCAAGGTTTTTCTTCTTCTTCTTCTTCTTCTTCATTGTGCGTGTCCTGTGAATGTTCACTGTAGATGTTAAGGTTGATTACTTTTGATGGTTTTCGTTGTCCTTAGGTGGGTGAGTTGGGAAAGACGTTCTTGTGGGATCCTTATTTTCCTGTTGGAATGAGGGATACACTTTTTCATGTTCTTCTTATGTTTTCGAAGCATCGTTTACAAGCTGTTCCTGTGGTTGAGCTTTCCAATTCTCACGTAATTGGTTTCATTACACAGGTACTTACTACTGGTTTTAACAACCCCCTCGATTACTTTTGACTAATCTTATGGGACAACACCTTTTAACATTTAGGTCCTAAGGAAACTTGTAGGATTGCATGTTTAGACTACTTGCCATGTAGGATTACATGAGGTTCAGGCAACTGAGGCTTCTCTGTTTCAAACGATTCATAAGATGTAGAAAATCATGCTGACGAAACTGAAACCTGCAGTACAGTTTGAAAGAGTGAAGTCATTTCAGGTTAATGGAGTGTTCGTAATCATTTTCTCTTCTTTTATAGACAGCAGTAATTCATTTGCTTCTGGAATCAAGTGGATTGGAGTGGTTCGATGGCATAGCGGACAAAGTTATATCAGACTTTCGGTAG

mRNA sequence

ATGGCTGAATCAAATCAAACGCAATGCATTGCGATGGATTCCGCCACCGCTTTACAACGGTATCTTGATCACATCCCCGTCAGTTCCATCTCCGGCATCAAGTCCTCCGTCGTTTTGGAAGTCAAGACTGGGGACTTCGTTAAGGATGCAATACGAATAATGTTTAAGAAGAATGTGGCTTCTGCTCTCATCGCCGATGTCTCCACCGATGGTTTCCCTGATCGGTTTATTGGCTTTGTTCATCTCTCAAGCTTGCTTCTATGGTGTATTCAGGAGATTCGAAAATTGGAGAATGAAATTGAGTGTATTGAGTCTGAGAAGACTAAAGAGACTGTTTGTGGGATTATGGGGTTTCTTGAACAGAATCCACACATTGGCCAAACCAAGGTGGGTGAGTTGGGAAAGACGTTCTTGTGGGATCCTTATTTTCCTGTTGGAATGAGGGATACACTTTTTCATGTTCTTCTTATGTTTTCGAAGCATCGTTTACAAGCTGTTCCTGTGGTTGAGCTTTCCAATTCTCACGTAATTGGTTTCATTACACAGACAGCAGTAATTCATTTGCTTCTGGAATCAAGTGGATTGGAGTGGTTCGATGGCATAGCGGACAAAGTTATATCAGACTTTCGGTAG

Coding sequence (CDS)

ATGGCTGAATCAAATCAAACGCAATGCATTGCGATGGATTCCGCCACCGCTTTACAACGGTATCTTGATCACATCCCCGTCAGTTCCATCTCCGGCATCAAGTCCTCCGTCGTTTTGGAAGTCAAGACTGGGGACTTCGTTAAGGATGCAATACGAATAATGTTTAAGAAGAATGTGGCTTCTGCTCTCATCGCCGATGTCTCCACCGATGGTTTCCCTGATCGGTTTATTGGCTTTGTTCATCTCTCAAGCTTGCTTCTATGGTGTATTCAGGAGATTCGAAAATTGGAGAATGAAATTGAGTGTATTGAGTCTGAGAAGACTAAAGAGACTGTTTGTGGGATTATGGGGTTTCTTGAACAGAATCCACACATTGGCCAAACCAAGGTGGGTGAGTTGGGAAAGACGTTCTTGTGGGATCCTTATTTTCCTGTTGGAATGAGGGATACACTTTTTCATGTTCTTCTTATGTTTTCGAAGCATCGTTTACAAGCTGTTCCTGTGGTTGAGCTTTCCAATTCTCACGTAATTGGTTTCATTACACAGACAGCAGTAATTCATTTGCTTCTGGAATCAAGTGGATTGGAGTGGTTCGATGGCATAGCGGACAAAGTTATATCAGACTTTCGGTAG

Protein sequence

MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVASALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLEQNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFITQTAVIHLLLESSGLEWFDGIADKVISDFR

Homology

[Close]

BLAST of IVF0008512.1 vs. ExPASy Swiss-Prot
Match: Q8LBB2 (SNF1-related protein kinase regulatory subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=KING1 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 7.1e-17
Identity = 51/209 (24.40%), Postives = 101/209 (48.33%), Query Frame = 0


Query: 18  LQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVASALIADVSTD---GFPD 77
           L    + IPVS+      S  +E+++   + +A++ + K  V SA + DV       + D
Sbjct: 49  LNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAVQTLSKFKVLSAPVVDVDAPEDASWID 108

Query: 78  RFIGFVHLSSLLLWCIQEIR---------------KLENEIECIESEKTKETVCGIMGFL 137
           R+IG V    +++W + ++                  +   + +++  +  T       L
Sbjct: 109 RYIGIVEFPGIVVWLLHQLEPPSPRSPAVAASNGFSHDFTTDVLDNGDSAVTSGNFFEVL 168

Query: 138 EQNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGF 197
             +     TKV ++  TF W P+  +   ++   +LL+ SK++++++PVV+L  + +   
Sbjct: 169 TSSELYKNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKMKSIPVVDLGVAKIENI 228

Query: 198 ITQTAVIHLLLESSGLEWFDGIADKVISD 209
           ITQ+ VIH+L E +GL WF+    K +S+
Sbjct: 229 ITQSGVIHMLAECAGLLWFEDWGIKTLSE 257

[Close]

BLAST of IVF0008512.1 vs. ExPASy Swiss-Prot
Match: Q9CAR3 (SNF1-related protein kinase regulatory subunit gamma-1-like OS=Arabidopsis thaliana OX=3702 GN=CBSCBS2 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.3e-14
Identity = 58/245 (23.67%), Postives = 99/245 (40.41%), Query Frame = 0


Query: 25  IPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVASALIADV---STDGFPDRFIGFVH 84
           IPVSS   +    V+E++    V +A++I+    + SA + +    S+  + +R++G + 
Sbjct: 47  IPVSSFPQVPGGRVIEIQAETPVSEAVKILSDSKILSAPVINTDHESSLDWRERYLGIID 106

Query: 85  LSSLLLWCIQEIRKLENEIECIESEKTKETVCGI-------------------------- 144
            SS++LW ++       E+  I    T  T  G+                          
Sbjct: 107 YSSIILWVLESA-----ELAAIALSATSATAAGVGAGAVGALGVAALGMTGPVAAAGLAA 166

Query: 145 -----------------------------MGFLE---QNPHIGQTKVGELGKTFLWDPYF 204
                                          F E   Q      T V  + K+F W P+ 
Sbjct: 167 AAVGAAVAGGVAAERGIGKDAPTAADKLGKDFYEVILQEEPFKSTTVRTILKSFRWAPFL 226

Query: 205 PVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFITQTAVIHLLLESSGLEWFDGIAD 209
           PV    ++  V+L+ SK+RL+ VPV++     +  ++TQ+AV+H L    G +WFD I+ 
Sbjct: 227 PVSTESSMLSVMLLLSKYRLRNVPVIKTGEPDIKNYVTQSAVVHGLEGCKGRDWFDHISA 286

[Close]

BLAST of IVF0008512.1 vs. ExPASy TrEMBL
Match: A0A0A0LM00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248690 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.3e-111
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA 60
           MAESNQTQCIAMDSATALQ+YLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMF+KNVA
Sbjct: 1   MAESNQTQCIAMDSATALQQYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFQKNVA 60

Query: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE 120
           SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESE TKETVCGI+GFLE
Sbjct: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEDTKETVCGILGFLE 120

Query: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI 180
           QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLM SKHRLQAVPVVELSNSHVIGFI
Sbjct: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMLSKHRLQAVPVVELSNSHVIGFI 180

Query: 181 TQTAVIHLLLESSGLEWFDGIADKVISDFR 211
           TQ+AVIHLLLESSGLEWFDGIADKVISDFR
Sbjct: 181 TQSAVIHLLLESSGLEWFDGIADKVISDFR 210

[Close]

BLAST of IVF0008512.1 vs. ExPASy TrEMBL
Match: A0A1S4E308 (SNF1-related protein kinase regulatory subunit gamma-1-like OS=Cucumis melo OX=3656 GN=LOC103499686 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98
Identity = 184/189 (97.35%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA 60
           MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA
Sbjct: 1   MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA 60

Query: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE 120
           SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE
Sbjct: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE 120

Query: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI 180
           QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI
Sbjct: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI 180

Query: 181 TQTAVIHLL 190
           TQ  V   L
Sbjct: 181 TQRIVYQQL 189

[Close]

BLAST of IVF0008512.1 vs. ExPASy TrEMBL
Match: A0A6J1G7U6 (SNF1-related protein kinase regulatory subunit gamma-1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451533 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.6e-91
Identity = 171/209 (81.82%), Postives = 188/209 (89.95%), Query Frame = 0


Query: 3   ESNQTQCI-AMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVAS 62
           ESNQ Q    +DSATALQ+Y D IPVSSISGIKS++VLEVKTGD VKDAIR+MFKKNV  
Sbjct: 5   ESNQPQSTPEIDSATALQQYFDRIPVSSISGIKSALVLEVKTGDCVKDAIRVMFKKNVDC 64

Query: 63  ALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLEQ 122
           ALIADV+++GFP+RFIGFVHLSSLLLWCIQEI KLE+EI+CIESE+T+E V GI+ FLEQ
Sbjct: 65  ALIADVTSEGFPERFIGFVHLSSLLLWCIQEIGKLEDEIKCIESEETQENVRGILSFLEQ 124

Query: 123 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFIT 182
           NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLL+ SKHRLQAVPVV L NSHV+GFIT
Sbjct: 125 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLLLSKHRLQAVPVVRLCNSHVVGFIT 184

Query: 183 QTAVIHLLLESSGLEWFDGIADKVISDFR 211
           Q AVIH+LLESSGLEWFD I DKVIS FR
Sbjct: 185 QNAVIHMLLESSGLEWFDSIVDKVISKFR 213

[Close]

BLAST of IVF0008512.1 vs. ExPASy TrEMBL
Match: A0A6J1KYZ5 (SNF1-related protein kinase regulatory subunit gamma-1-like OS=Cucurbita maxima OX=3661 GN=LOC111499532 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 169/209 (80.86%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 3   ESNQTQCI-AMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVAS 62
           ESNQ+Q    +DSATALQ+Y D IPVSSISGIKS++VLEVKTGD VKDAIR+MFKKNV  
Sbjct: 5   ESNQSQSTPEIDSATALQQYFDRIPVSSISGIKSALVLEVKTGDCVKDAIRVMFKKNVDC 64

Query: 63  ALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLEQ 122
           ALIADV+++GFPDRFIGFVHLSSLLLWCIQEI KLE+EI+CI++E+T+E V GI+ FLEQ
Sbjct: 65  ALIADVTSEGFPDRFIGFVHLSSLLLWCIQEIGKLEDEIKCIQAEETQENVRGILSFLEQ 124

Query: 123 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFIT 182
           NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLL+ SKHRLQAVPVV+L NSHV+GFIT
Sbjct: 125 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLLLSKHRLQAVPVVQLCNSHVVGFIT 184

Query: 183 QTAVIHLLLESSGLEWFDGIADKVISDFR 211
           + AVIH+LLESSGLEWFD I DKVIS FR
Sbjct: 185 KNAVIHMLLESSGLEWFDSIVDKVISKFR 213

[Close]

BLAST of IVF0008512.1 vs. ExPASy TrEMBL
Match: A0A6J1G7W3 (SNF1-related protein kinase regulatory subunit gamma-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451533 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.2e-87
Identity = 171/235 (72.77%), Postives = 188/235 (80.00%), Query Frame = 0


Query: 3   ESNQTQCI-AMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVAS 62
           ESNQ Q    +DSATALQ+Y D IPVSSISGIKS++VLEVKTGD VKDAIR+MFKKNV  
Sbjct: 5   ESNQPQSTPEIDSATALQQYFDRIPVSSISGIKSALVLEVKTGDCVKDAIRVMFKKNVDC 64

Query: 63  ALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLEQ 122
           ALIADV+++GFP+RFIGFVHLSSLLLWCIQEI KLE+EI+CIESE+T+E V GI+ FLEQ
Sbjct: 65  ALIADVTSEGFPERFIGFVHLSSLLLWCIQEIGKLEDEIKCIESEETQENVRGILSFLEQ 124

Query: 123 NPHIGQTK--------------------------VGELGKTFLWDPYFPVGMRDTLFHVL 182
           NPHIGQTK                          VGELGKTFLWDPYFPVGMRDTLFHVL
Sbjct: 125 NPHIGQTKVFVSCLIVAFHGFLLISFGGFLGKFQVGELGKTFLWDPYFPVGMRDTLFHVL 184

Query: 183 LMFSKHRLQAVPVVELSNSHVIGFITQTAVIHLLLESSGLEWFDGIADKVISDFR 211
           L+ SKHRLQAVPVV L NSHV+GFITQ AVIH+LLESSGLEWFD I DKVIS FR
Sbjct: 185 LLLSKHRLQAVPVVRLCNSHVVGFITQNAVIHMLLESSGLEWFDSIVDKVISKFR 239

[Close]

BLAST of IVF0008512.1 vs. NCBI nr
Match: KGN61852.2 (hypothetical protein Csa_005954 [Cucumis sativus])

HSP 1 Score: 410 bits (1055), Expect = 2.30e-141
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA 60
           MAESNQTQCIAMDSATALQ+YLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMF+KNVA
Sbjct: 1   MAESNQTQCIAMDSATALQQYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFQKNVA 60

Query: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE 120
           SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESE TKETVCGI+GFLE
Sbjct: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEDTKETVCGILGFLE 120

Query: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI 180
           QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLM SKHRLQAVPVVELSNSHVIGFI
Sbjct: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMLSKHRLQAVPVVELSNSHVIGFI 180

Query: 181 TQTAVIHLLLESSGLEWFDGIADKVISDFR 210
           TQ+AVIHLLLESSGLEWFDGIADKVISDFR
Sbjct: 181 TQSAVIHLLLESSGLEWFDGIADKVISDFR 210

[Close]

BLAST of IVF0008512.1 vs. NCBI nr
Match: XP_031737382.1 (SNF1-related protein kinase regulatory subunit gamma-1 [Cucumis sativus])

HSP 1 Score: 410 bits (1055), Expect = 1.11e-140
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA 60
           MAESNQTQCIAMDSATALQ+YLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMF+KNVA
Sbjct: 51  MAESNQTQCIAMDSATALQQYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFQKNVA 110

Query: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE 120
           SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESE TKETVCGI+GFLE
Sbjct: 111 SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEDTKETVCGILGFLE 170

Query: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI 180
           QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLM SKHRLQAVPVVELSNSHVIGFI
Sbjct: 171 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMLSKHRLQAVPVVELSNSHVIGFI 230

Query: 181 TQTAVIHLLLESSGLEWFDGIADKVISDFR 210
           TQ+AVIHLLLESSGLEWFDGIADKVISDFR
Sbjct: 231 TQSAVIHLLLESSGLEWFDGIADKVISDFR 260

[Close]

BLAST of IVF0008512.1 vs. NCBI nr
Match: XP_016902612.1 (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Cucumis melo])

HSP 1 Score: 366 bits (940), Expect = 4.85e-124
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA 60
           MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA
Sbjct: 1   MAESNQTQCIAMDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVA 60

Query: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE 120
           SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE
Sbjct: 61  SALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLE 120

Query: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI 180
           QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI
Sbjct: 121 QNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFI 180

Query: 181 TQTAV 185
           TQ  V
Sbjct: 181 TQRIV 185

[Close]

BLAST of IVF0008512.1 vs. NCBI nr
Match: XP_023533161.1 (SNF1-related protein kinase regulatory subunit gamma-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348 bits (893), Expect = 8.81e-117
Identity = 173/209 (82.78%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 3   ESNQTQCIA-MDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVAS 62
           ESNQ+Q    +DSATALQ+Y D IPVSSISGIKS++VLEVKTGD VKDAIR+MFKKNV  
Sbjct: 5   ESNQSQSTPEIDSATALQQYFDRIPVSSISGIKSALVLEVKTGDCVKDAIRVMFKKNVDC 64

Query: 63  ALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLEQ 122
           ALIADV+++GFPDRFIGFVHLSSLLLWCIQEI KLENEI+CIESE+T+E V GI+ FLEQ
Sbjct: 65  ALIADVTSEGFPDRFIGFVHLSSLLLWCIQEIGKLENEIKCIESEETQENVSGILSFLEQ 124

Query: 123 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFIT 182
           NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLL+ SKHRL+AVPVV+L NSHV+GFIT
Sbjct: 125 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLLLSKHRLRAVPVVQLCNSHVVGFIT 184

Query: 183 QTAVIHLLLESSGLEWFDGIADKVISDFR 210
           Q AVIHLLLESSGLEWFD I DKVIS FR
Sbjct: 185 QNAVIHLLLESSGLEWFDSIVDKVISKFR 213

[Close]

BLAST of IVF0008512.1 vs. NCBI nr
Match: XP_022947775.1 (SNF1-related protein kinase regulatory subunit gamma-1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 343 bits (880), Expect = 8.51e-115
Identity = 171/209 (81.82%), Postives = 188/209 (89.95%), Query Frame = 0


Query: 3   ESNQTQCIA-MDSATALQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVAS 62
           ESNQ Q    +DSATALQ+Y D IPVSSISGIKS++VLEVKTGD VKDAIR+MFKKNV  
Sbjct: 5   ESNQPQSTPEIDSATALQQYFDRIPVSSISGIKSALVLEVKTGDCVKDAIRVMFKKNVDC 64

Query: 63  ALIADVSTDGFPDRFIGFVHLSSLLLWCIQEIRKLENEIECIESEKTKETVCGIMGFLEQ 122
           ALIADV+++GFP+RFIGFVHLSSLLLWCIQEI KLE+EI+CIESE+T+E V GI+ FLEQ
Sbjct: 65  ALIADVTSEGFPERFIGFVHLSSLLLWCIQEIGKLEDEIKCIESEETQENVRGILSFLEQ 124

Query: 123 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFIT 182
           NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLL+ SKHRLQAVPVV L NSHV+GFIT
Sbjct: 125 NPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLLLSKHRLQAVPVVRLCNSHVVGFIT 184

Query: 183 QTAVIHLLLESSGLEWFDGIADKVISDFR 210
           Q AVIH+LLESSGLEWFD I DKVIS FR
Sbjct: 185 QNAVIHMLLESSGLEWFDSIVDKVISKFR 213

[Close]

BLAST of IVF0008512.1 vs. TAIR 10
Match: AT3G48530.1 (SNF1-related protein kinase regulatory subunit gamma 1 )

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-18
Identity = 51/209 (24.40%), Postives = 101/209 (48.33%), Query Frame = 0


Query: 18  LQRYLDHIPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVASALIADVSTD---GFPD 77
           L    + IPVS+      S  +E+++   + +A++ + K  V SA + DV       + D
Sbjct: 49  LNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAVQTLSKFKVLSAPVVDVDAPEDASWID 108

Query: 78  RFIGFVHLSSLLLWCIQEIR---------------KLENEIECIESEKTKETVCGIMGFL 137
           R+IG V    +++W + ++                  +   + +++  +  T       L
Sbjct: 109 RYIGIVEFPGIVVWLLHQLEPPSPRSPAVAASNGFSHDFTTDVLDNGDSAVTSGNFFEVL 168

Query: 138 EQNPHIGQTKVGELGKTFLWDPYFPVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGF 197
             +     TKV ++  TF W P+  +   ++   +LL+ SK++++++PVV+L  + +   
Sbjct: 169 TSSELYKNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKMKSIPVVDLGVAKIENI 228

Query: 198 ITQTAVIHLLLESSGLEWFDGIADKVISD 209
           ITQ+ VIH+L E +GL WF+    K +S+
Sbjct: 229 ITQSGVIHMLAECAGLLWFEDWGIKTLSE 257

[Close]

BLAST of IVF0008512.1 vs. TAIR 10
Match: AT1G69800.1 (Cystathionine beta-synthase (CBS) protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.2e-15
Identity = 58/245 (23.67%), Postives = 99/245 (40.41%), Query Frame = 0


Query: 25  IPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVASALIADV---STDGFPDRFIGFVH 84
           IPVSS   +    V+E++    V +A++I+    + SA + +    S+  + +R++G + 
Sbjct: 47  IPVSSFPQVPGGRVIEIQAETPVSEAVKILSDSKILSAPVINTDHESSLDWRERYLGIID 106

Query: 85  LSSLLLWCIQEIRKLENEIECIESEKTKETVCGI-------------------------- 144
            SS++LW ++       E+  I    T  T  G+                          
Sbjct: 107 YSSIILWVLESA-----ELAAIALSATSATAAGVGAGAVGALGVAALGMTGPVAAAGLAA 166

Query: 145 -----------------------------MGFLE---QNPHIGQTKVGELGKTFLWDPYF 204
                                          F E   Q      T V  + K+F W P+ 
Sbjct: 167 AAVGAAVAGGVAAERGIGKDAPTAADKLGKDFYEVILQEEPFKSTTVRTILKSFRWAPFL 226

Query: 205 PVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFITQTAVIHLLLESSGLEWFDGIAD 209
           PV    ++  V+L+ SK+RL+ VPV++     +  ++TQ+AV+H L    G +WFD I+ 
Sbjct: 227 PVSTESSMLSVMLLLSKYRLRNVPVIKTGEPDIKNYVTQSAVVHGLEGCKGRDWFDHISA 286

[Close]

BLAST of IVF0008512.1 vs. TAIR 10
Match: AT1G69800.2 (Cystathionine beta-synthase (CBS) protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.2e-15
Identity = 58/245 (23.67%), Postives = 99/245 (40.41%), Query Frame = 0


Query: 25  IPVSSISGIKSSVVLEVKTGDFVKDAIRIMFKKNVASALIADV---STDGFPDRFIGFVH 84
           IPVSS   +    V+E++    V +A++I+    + SA + +    S+  + +R++G + 
Sbjct: 76  IPVSSFPQVPGGRVIEIQAETPVSEAVKILSDSKILSAPVINTDHESSLDWRERYLGIID 135

Query: 85  LSSLLLWCIQEIRKLENEIECIESEKTKETVCGI-------------------------- 144
            SS++LW ++       E+  I    T  T  G+                          
Sbjct: 136 YSSIILWVLESA-----ELAAIALSATSATAAGVGAGAVGALGVAALGMTGPVAAAGLAA 195

Query: 145 -----------------------------MGFLE---QNPHIGQTKVGELGKTFLWDPYF 204
                                          F E   Q      T V  + K+F W P+ 
Sbjct: 196 AAVGAAVAGGVAAERGIGKDAPTAADKLGKDFYEVILQEEPFKSTTVRTILKSFRWAPFL 255

Query: 205 PVGMRDTLFHVLLMFSKHRLQAVPVVELSNSHVIGFITQTAVIHLLLESSGLEWFDGIAD 209
           PV    ++  V+L+ SK+RL+ VPV++     +  ++TQ+AV+H L    G +WFD I+ 
Sbjct: 256 PVSTESSMLSVMLLLSKYRLRNVPVIKTGEPDIKNYVTQSAVVHGLEGCKGRDWFDHISA 315

The following BLAST results are available for this feature:

BLAST of IVF0008512.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBB2	7.1e-17	24.40	SNF1-related protein kinase regulatory subunit gamma-1 OS=Arabidopsis thaliana O...	[more]
Q9CAR3	7.3e-14	23.67	SNF1-related protein kinase regulatory subunit gamma-1-like OS=Arabidopsis thali...	[more]

BLAST of IVF0008512.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM00	1.3e-111	97.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248690 PE=4 SV=1	[more]
A0A1S4E308	3.8e-98	97.35	SNF1-related protein kinase regulatory subunit gamma-1-like OS=Cucumis melo OX=3...	[more]
A0A6J1G7U6	2.6e-91	81.82	SNF1-related protein kinase regulatory subunit gamma-1-like isoform X2 OS=Cucurb...	[more]
A0A6J1KYZ5	4.5e-91	80.86	SNF1-related protein kinase regulatory subunit gamma-1-like OS=Cucurbita maxima ...	[more]
A0A6J1G7W3	5.2e-87	72.77	SNF1-related protein kinase regulatory subunit gamma-1-like isoform X1 OS=Cucurb...	[more]

BLAST of IVF0008512.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61852.2	2.30e-141	97.14	hypothetical protein Csa_005954 [Cucumis sativus]	[more]
XP_031737382.1	1.11e-140	97.14	SNF1-related protein kinase regulatory subunit gamma-1 [Cucumis sativus]	[more]
XP_016902612.1	4.85e-124	98.92	PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Cucumis ...	[more]
XP_023533161.1	8.81e-117	82.78	SNF1-related protein kinase regulatory subunit gamma-1-like [Cucurbita pepo subs...	[more]
XP_022947775.1	8.51e-115	81.82	SNF1-related protein kinase regulatory subunit gamma-1-like isoform X2 [Cucurbit...	[more]

BLAST of IVF0008512.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48530.1	5.0e-18	24.40	SNF1-related protein kinase regulatory subunit gamma 1	[more]
AT1G69800.1	5.2e-15	23.67	Cystathionine beta-synthase (CBS) protein	[more]
AT1G69800.2	5.2e-15	23.67	Cystathionine beta-synthase (CBS) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	GENE3D	3.10.580.10		coord: 3..193 e-value: 2.4E-14 score: 55.4
None	No IPR available	PANTHER	PTHR13780	AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT	coord: 5..210
None	No IPR available	PANTHER	PTHR13780:SF124	OS01G0633400 PROTEIN	coord: 5..210
None	No IPR available	CDD	cd02205	CBS_pair_SF	coord: 41..186 e-value: 3.71075E-5 score: 39.5352
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 18..191
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 37..90 e-value: 63.0 score: 2.5 coord: 141..190 e-value: 0.037 score: 23.2
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 140..190 e-value: 7.8E-4 score: 19.8
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 138..195 score: 9.117147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0008512	IVF0008512	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0008512.1-exon	IVF0008512.1-exon-chr11:1218009..1218095	exon
IVF0008512.1-exon	IVF0008512.1-exon-chr11:1218380..1218538	exon
IVF0008512.1-exon	IVF0008512.1-exon-chr11:1218640..1218753	exon
IVF0008512.1-exon	IVF0008512.1-exon-chr11:1218814..1218974	exon
IVF0008512.1-exon	IVF0008512.1-exon-chr11:1219062..1219173	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0008512.1-cds	IVF0008512.1-cds-chr11:1218009..1218095	CDS
IVF0008512.1-cds	IVF0008512.1-cds-chr11:1218380..1218538	CDS
IVF0008512.1-cds	IVF0008512.1-cds-chr11:1218640..1218753	CDS
IVF0008512.1-cds	IVF0008512.1-cds-chr11:1218814..1218974	CDS
IVF0008512.1-cds	IVF0008512.1-cds-chr11:1219062..1219173	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0008512.1	IVF0008512.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity