IVF0007752.2 (mRNA) Melon (IVF77) v1

Overview
NameIVF0007752.2
TypemRNA
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr10: 1362688 .. 1362995 (-)
Sequence length276
RNA-Seq ExpressionIVF0007752.2
SyntenyIVF0007752.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCGTTTGTTCGAGATTTTCAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAATAACAGAGGCAGCCGTCGTGGCCTCCGCCGCTACGATGTCTGTTCGGTGCTGTTTCCATGTAGATGTATTATTGGTGCTTCTGGAGGTGAAAAAAAGGAAAAAGATGGAGATTACGACGTGGAGGAAGCTTTTCCAGAATCGTTGGATTGGAGTGATAATGATGATGATTCGATTGATCGGAGAGCTGAGATTTTCATTCAGAAGTTCTACGCGGATATGAAAATGGAGAGGCTAGCATCCATTTGA

mRNA sequence

ATGGGTCGTTTGTTCGAGATTTTCAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAATAACAGAGGCAGCCGTCGTGGCCTCCGCCGCTACGATGTCTGTTCGGTGCTGTTTCCATGTAGATGAAAAAGATGGAGATTACGACGTGGAGGAAGCTTTTCCAGAATCGTTGGATTGGAGTGATAATGATGATGATTCGATTGATCGGAGAGCTGAGATTTTCATTCAGAAGTTCTACGCGGATATGAAAATGGAGAGGCTAGCATCCATTTGA

Coding sequence (CDS)

ATGGGTCGTTTGTTCGAGATTTTCAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAATAACAGAGGCAGCCGTCGTGGCCTCCGCCGCTACGATGTCTGTTCGGTGCTGTTTCCATGTAGATGAAAAAGATGGAGATTACGACGTGGAGGAAGCTTTTCCAGAATCGTTGGATTGGAGTGATAATGATGATGATTCGATTGATCGGAGAGCTGAGATTTTCATTCAGAAGTTCTACGCGGATATGAAAATGGAGAGGCTAGCATCCATTTGA

Protein sequence

MGRLFEIFNSPLPPLLCFGSITEAAVVASAATMSVRCCFHVDEKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI
Homology
BLAST of IVF0007752.2 vs. ExPASy TrEMBL
Match: A0A5A7SZQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001120 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.8e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 43  EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 92
           EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI
Sbjct: 106 EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154

BLAST of IVF0007752.2 vs. ExPASy TrEMBL
Match: A0A0A0KR56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609810 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 4  LFEIFNSPLPPLLCFGSITEAAVVASAATMSVRCCFHVD 43
          LFEI NSPLPPLLCFGSITEAAVVAS ATMSVRCCFHVD
Sbjct: 3  LFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVD 41

BLAST of IVF0007752.2 vs. ExPASy TrEMBL
Match: A0A5D3DIH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00530 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 43 EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 92
          E DGDYD+EEAF E LD S +DDDSID RAE FIQKFYADMKMERLASI
Sbjct: 6  EGDGDYDMEEAFLELLD-SIDDDDSIDPRAETFIQKFYADMKMERLASI 53

BLAST of IVF0007752.2 vs. ExPASy TrEMBL
Match: A0A6J1DC42 (uncharacterized protein LOC111018726 OS=Momordica charantia OX=3673 GN=LOC111018726 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.9e-08
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 44  KDGDYDVEEA------FPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLA 90
           +DG+Y VEEA      F E+L+WS+++DDSID RAE+FIQKFYADMKME LA
Sbjct: 93  RDGNYRVEEAEEEAGQFLEALEWSEDEDDSIDHRAELFIQKFYADMKMEALA 144

BLAST of IVF0007752.2 vs. ExPASy TrEMBL
Match: A0A6J1G0E9 (uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC111449533 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.7e-05
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 46  GDYDVEEAFP-------ESLDWSD--NDDDSIDRRAEIFIQKFYADMKMERLASI 92
           G+ D E  FP       E+ DWS+  +++DSIDRRAE+FIQKFYADM+MERLA+I
Sbjct: 89  GENDGEVGFPAIEGRGSEAWDWSELSDEEDSIDRRAELFIQKFYADMEMERLAAI 143

BLAST of IVF0007752.2 vs. NCBI nr
Match: KAA0034569.1 (uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK09121.1 uncharacterized protein E5676_scaffold475G001120 [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 3.84e-24
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 43  EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 91
           EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI
Sbjct: 106 EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154

BLAST of IVF0007752.2 vs. NCBI nr
Match: KAE8648793.1 (hypothetical protein Csa_009258 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 5.51e-18
Identity = 44/49 (89.80%), Postives = 44/49 (89.80%), Query Frame = 0

Query: 43  EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 91
           E DGDY VEEAFPESLDWSD DDDSIDRRAEIFIQKFY DMKMERL SI
Sbjct: 103 EGDGDYGVEEAFPESLDWSD-DDDSIDRRAEIFIQKFYEDMKMERLTSI 150

BLAST of IVF0007752.2 vs. NCBI nr
Match: XP_004135396.1 (uncharacterized protein LOC101211232 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 5.79e-18
Identity = 44/49 (89.80%), Postives = 44/49 (89.80%), Query Frame = 0

Query: 43  EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 91
           E DGDY VEEAFPESLDWSD DDDSIDRRAEIFIQKFY DMKMERL SI
Sbjct: 105 EGDGDYGVEEAFPESLDWSD-DDDSIDRRAEIFIQKFYEDMKMERLTSI 152

BLAST of IVF0007752.2 vs. NCBI nr
Match: XP_038893176.1 (uncharacterized protein LOC120082033 [Benincasa hispida])

HSP 1 Score: 83.2 bits (204), Expect = 7.80e-18
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0

Query: 43  EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLA 89
           E+DGDY VEEA PESLDWSD DDDSIDRRAEIFIQKFYADMKMERLA
Sbjct: 102 EEDGDYSVEEALPESLDWSD-DDDSIDRRAEIFIQKFYADMKMERLA 147

BLAST of IVF0007752.2 vs. NCBI nr
Match: KAA0040479.1 (uncharacterized protein E6C27_scaffold262G00130 [Cucumis melo var. makuwa] >TYK23481.1 uncharacterized protein E5676_scaffold278G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 6.40e-14
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 43 EKDGDYDVEEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 91
          E DGDYD+EEAF E LD S +DDDSID RAE FIQKFYADMKMERLASI
Sbjct: 6  EGDGDYDMEEAFLELLD-SIDDDDSIDPRAETFIQKFYADMKMERLASI 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SZQ93.8e-18100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KR561.2e-1194.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609810 PE=4 SV=1[more]
A0A5D3DIH92.4e-0981.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1DC427.9e-0865.38uncharacterized protein LOC111018726 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1G0E93.7e-0558.18uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC1114495... [more]
Match NameE-valueIdentityDescription
KAA0034569.13.84e-24100.00uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK0... [more]
KAE8648793.15.51e-1889.80hypothetical protein Csa_009258 [Cucumis sativus][more]
XP_004135396.15.79e-1889.80uncharacterized protein LOC101211232 [Cucumis sativus][more]
XP_038893176.17.80e-1891.49uncharacterized protein LOC120082033 [Benincasa hispida][more]
KAA0040479.16.40e-1481.63uncharacterized protein E6C27_scaffold262G00130 [Cucumis melo var. makuwa] >TYK2... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 65..91
e-value: 1.0E-9
score: 37.8

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
IVF0007752IVF0007752gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
IVF0007752.2-exonIVF0007752.2-exon-chr10:1362688..1362837exon
IVF0007752.2-exonIVF0007752.2-exon-chr10:1362870..1362995exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
IVF0007752.2-cdsIVF0007752.2-cds-chr10:1362688..1362837CDS
IVF0007752.2-cdsIVF0007752.2-cds-chr10:1362870..1362995CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
IVF0007752.2IVF0007752.2-proteinpolypeptide