IVF0002059.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0002059.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	rho-N domain-containing protein 1, chloroplastic isoform X1
Location	chr04: 13310495 .. 13314698 (-)
Sequence length	1633
RNA-Seq Expression	IVF0002059.1
Synteny	IVF0002059.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCTTCCTTCCATCCGTCTTAACCAGCAATGTCTCAAGCCATTCATCTTCTTCCTCGGAACCCTACAGGTATCTGTTCTTCATATCCACAAAATCTCTGTTGGGTGCTCTTTTATTTTTGTTCTTTGCTTGCTTGAAAGCTGGGAAGTTAAGTACACTGTTATCTTTACATTTACTGGGTGTCTCTAATTTCCATATAATTTCATGGGTTCTGACCTAACGATCGAATATTTGCTTTAAGGTCTCTAAAGTTCTCGAATTTTGAATTTCCATAGGTTTTACCGCTTGTTGGTTTTTTTTTTGTTTACTTTCCTATTTGATTGAATATGTTTGTGGAGAAATTAAAGCTTTGCACTGGTTGGATTTCGTTCGACTTTTCTGTTGAGCTTGTTGTTCAGTTTCTCTTTATTTTCCTTTTTCTAAGTTTAGGTTTGGTTTTAGAGTACTTAATATCATATTCTGATTGCTTGAAAATTCTCTACTTGGTTGGATTAGTGACCCTTTGGTTTGTTTTGCTGTATCATGTTCTGGCCTTCTGGAATTGAAGTAGATATATGCGTTTTATTTTCCTCAGTTTTTGGAGGAAGGTCGAGACATAATGGTTACATCTGATATTGGGATATTCTCACTACTTGCGAAGTTGGTATATGCATCGTCACTGTGCAGTATTAGCATTTTTCGAATCTGATCTCATTGTTATATGTTCTGTTCTGATATTGACTTTTCCAGTTTTCACATCCAACGTTTTAAAAGGTTATTGAGGCTTTCGTCTTGAGGGTCGCCTCAGGACAAGACTCTAACTTTTAGCTGTGAGAATTGTGGCTTCTTTGAACCACGAGAGGTTTATGCCATTTGTGATAATGCACCAAGGCTTAAAAGTCTCTATGACCCTTATATCGATTAGAAAAATAATATTAATTTGTCTCATTCTTCAAAATTATAAAACTTCGTGTTCTGACAATAGGAACTATTACTACTTTTCCTAGTGTGACTTTCAAAGTAATGAAGGAAAAAAAAATTATAATATTAGTCAATCCTATAAATGATAATAATAGTGAAGTTAATGATCTCCCTTTTAGATTTTTTTGTTTAAGTCGCAACTAATAGGGGTTGTTTTTTTATTTTTATGTAATTTATTTATTTATTATTCTCTTTTATGATCATTATGTTTGGCAAAACATGGTCATTCTAACATAGGAGTTAAATGTTTTTAGTTAAATTTGAGGCTTATGCCTTATGCTGGTTTGAGCTTGTGTTGTGCCCTTACGAGGAAAAGCTACAAGGGCGCTTTTTACCTTTGTTGATTTCCATATTATTATTCACATACGAAGATTGTTTAAACTATTTTGAATTAAGTGTTTTACTATACTTATTGAAAGTAGAGACAAAGAACACACAAGTTTACGTGGAAACCCGAGTATCGGGAGAAAAACCACGATATTTTGTTCTTACTATTTTTTGATAATGACAAATGATACAAAGGAGAAATAAATAAGCTACAGTAAGGAATAAAAAAAGAAAAGATATCAGGTCAAATCTTCTCTTAGGCCAAGCCCACTAAATCTAACAATACCTTCGTCTTGAATTACTTTGGAGTGTTGCTTCCATAATTCAACGACGTGCCTCTATCTATTTTGGGAAGTGATTGACGATTGTACGTTGTCACATTTATAAGATTTTTTTCATTTTTATTTCTTGTTGATCACTGTTGGTTGATGCATTACTGATGTTCAATAGTAACAGATAACGAGTCTGGAATTGCATGACTTGGTTGTAAAAACATTAGGCTGTTCATATATGCTCAAATCATGAAACTTAAAAGCCTATGACTTGACTGCTAAGTTGTTTTCTCGATGCCCTTTACCTACAACAACTGGTCCTAGTTGTTGCTTCTCCATTTTTCAATGAATAACCACACTATTATTCGTTGTTTTGATATACTTTTCAATGAAAGCTTCTTTGTCATTTCTACATTTCTTCTTTTATCTCTTTTGAAGACGACGCCTTTTCTTTATTTGAGTTCATGACTTCAATTGCATAGTTCTAATTTTGTGATTGTTTTTTTTTTCAATGAATAACCACACTTACTTAAAAGAAGTGCCTCAAGCCAAGCAAAATAAAACTAAAAAATGTTTACATAAAAGTTCCGTAATCTGAAGCAAACAAATTGAAATGTAATCTAGCAAGAGACTGAACATTAGAACTAATTGCGTAGTTCTGATATTGTGGGTTATACCTTATAGCATGATGGATGACAACTGTTGCTATGTTTATGATTGCTTACTATTAATGTATGGCAGTTCACTTTGGAATGATAGGTGGAAAATTCGAGGTAGGTGAAGTATTTTTTTTCGTTGAAGGTATACTTCTTTTTCTCTTTTGAAGGCAACGTCTTTTCTTGCTGCAGATGGCTGTTCTAGATTGGTATGCTACAATTTTTTTACCCAAATTTAGATTGAAGATTTAAAAAATTGGTTAGAAAGAAAAACTTTAGAACAAACCTGCTTTGTTTTTGCAACATTCAGGGGATTTCAATATATTTATGGAATGGGAATCATACTTTTTTCTTACTTGGATACTTCTCCCTTATAAATTTTGTTCTATTTTGCTTTATATAATGTTGGTTACTACTCGTGCTAAAAATTTTATTAGTTTTTATAAACATGGAATCTGGATTTGATATAGGCTTCGGATTGTCAGATAGCAGATGCCTACCGTGCTCTGGAGTTTCGGGACGAGCAGCCTCATTCTCTTTTCGCTCTTTATGTGCTGAACATGGAATCAATGTACCAGTAAAATTTAGACCGCTAAACTGTACTTCGTTGGGGGTGTCTTTTACGTGCAAAGCCAGCTCAGGTCATAGGAGAAACCCAGATTTCCCAAAGCAAAATAGGCAAGGCTACTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGAAAATGTTGATGAATCTGATTTATTATCGTCTAGAAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCTCAGGCCACTGCTACACCAGGCCCAAGGGAAAAGGAAATCGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAACGAGCTGCAATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACGAAAGGGAGCGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATGCGGTGGAACAAGGGAAGAGAAGCAGTGGTGCGGGTGGTAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAGAGGCTCAAGCATTTTTGGCCTAAGTCCCAATTTGAGAGAGAAGGCCCAAGAACCTGCAGGTTCTTTCAGAAGACCTGCGTCAAATTTTCAACGTAGATCCCCCGTGCCTCGGGTGAAGTATCAACCAATTTACCCTGGGGAAAGTATTGTTGACTCGACCAATGGTATGAATTCAAAAGGTATGAAACTTAATGGAACAGAAACAGGTTCTCAACTGAAAGCAAAGGTATGGACTAGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGAGACACAGAACAGGAGCCAGAGGTGGACCAAGAGTTTGAAATGGAACCAGAGGCTGAAACATATGACCTAGAGCATGAAGCTGATGAAATGGAGCCTGAACTTGTTAATTTGTTAGGTGTGTCATCAGACATCGATGACACGTTTGAGGATGATATTAAAGACAATGAGGAATTTTCAAAGCATGGTGAACATGAGAACTTAAACTCATTGAAACTTGCTGAACTAAGAGCAATTGCTAAATCTCGTAGTTTGAGAGGGTTTTCAAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACAGTCATTGAGGATGTCATGCTGGACAGGAACCTCTGGATTTAGGATGTTTAGGTGTCTTTTCTTTACTTATTTTTTTAAAAATGTTCTTGTGCTTATCAATCTGTTTGACTAGTTTTGAGTTAGAAATTGGTATTAGCTTTACAAACTCTTTCTCAGATTGTATATTAGGCTAATTTTCTCAGGTTCAGAGTACATGTCTACATGTCAACTTAAGTCTTTTCTCTTCTATTTAAATTCTTGTTCATTTATACGAACCATTTTTTAAAGGACTTTTTATGCTAACATGGTTTTCAAGCCTTTCCATCATGTTGGTATGTAGGTGG

mRNA sequence

CTTTTCTTCCTTCCATCCGTCTTAACCAGCAATGTCTCAAGCCATTCATCTTCTTCCTCGGAACCCTACAGTTCACTTTGGAATGATAGGTGGAAAATTCGAGGTAGGTGAAGTATTTTTTTTCGTTGAAGATAGCAGATGCCTACCGTGCTCTGGAGTTTCGGGACGAGCAGCCTCATTCTCTTTTCGCTCTTTATGTGCTGAACATGGAATCAATGTACCAGTAAAATTTAGACCGCTAAACTGTACTTCGTTGGGGGTGTCTTTTACGTGCAAAGCCAGCTCAGGTCATAGGAGAAACCCAGATTTCCCAAAGCAAAATAGGCAAGGCTACTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGAAAATGTTGATGAATCTGATTTATTATCGTCTAGAAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCTCAGGCCACTGCTACACCAGGCCCAAGGGAAAAGGAAATCGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAACGAGCTGCAATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACGAAAGGGAGCGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATGCGGTGGAACAAGGGAAGAGAAGCAGTGGTGCGGGTGGTAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAGAGGCTCAAGCATTTTTGGCCTAAGTCCCAATTTGAGAGAGAAGGCCCAAGAACCTGCAGGTTCTTTCAGAAGACCTGCGTCAAATTTTCAACGTAGATCCCCCGTGCCTCGGGTGAAGTATCAACCAATTTACCCTGGGGAAAGTATTGTTGACTCGACCAATGGTATGAATTCAAAAGGTATGAAACTTAATGGAACAGAAACAGGTTCTCAACTGAAAGCAAAGGTATGGACTAGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGAGACACAGAACAGGAGCCAGAGGTGGACCAAGAGTTTGAAATGGAACCAGAGGCTGAAACATATGACCTAGAGCATGAAGCTGATGAAATGGAGCCTGAACTTGTTAATTTGTTAGGTGTGTCATCAGACATCGATGACACGTTTGAGGATGATATTAAAGACAATGAGGAATTTTCAAAGCATGGTGAACATGAGAACTTAAACTCATTGAAACTTGCTGAACTAAGAGCAATTGCTAAATCTCGTAGTTTGAGAGGGTTTTCAAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACAGTCATTGAGGATGTCATGCTGGACAGGAACCTCTGGATTTAGGATGTTTAGGTGTCTTTTCTTTACTTATTTTTTTAAAAATGTTCTTGTGCTTATCAATCTGTTTGACTAGTTTTGAGTTAGAAATTGGTATTAGCTTTACAAACTCTTTCTCAGATTGTATATTAGGCTAATTTTCTCAGGTTCAGAGTACATGTCTACATGTCAACTTAAGTCTTTTCTCTTCTATTTAAATTCTTGTTCATTTATACGAACCATTTTTTAAAGGACTTTTTATGCTAACATGGTTTTCAAGCCTTTCCATCATGTTGGTATGTAGGTGG

Coding sequence (CDS)

ATGTCTCAAGCCATTCATCTTCTTCCTCGGAACCCTACAGTTCACTTTGGAATGATAGGTGGAAAATTCGAGGTAGGTGAAGTATTTTTTTTCGTTGAAGATAGCAGATGCCTACCGTGCTCTGGAGTTTCGGGACGAGCAGCCTCATTCTCTTTTCGCTCTTTATGTGCTGAACATGGAATCAATGTACCAGTAAAATTTAGACCGCTAAACTGTACTTCGTTGGGGGTGTCTTTTACGTGCAAAGCCAGCTCAGGTCATAGGAGAAACCCAGATTTCCCAAAGCAAAATAGGCAAGGCTACTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGAAAATGTTGATGAATCTGATTTATTATCGTCTAGAAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCTCAGGCCACTGCTACACCAGGCCCAAGGGAAAAGGAAATCGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAACGAGCTGCAATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACGAAAGGGAGCGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATGCGGTGGAACAAGGGAAGAGAAGCAGTGGTGCGGGTGGTAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAGAGGCTCAAGCATTTTTGGCCTAAGTCCCAATTTGAGAGAGAAGGCCCAAGAACCTGCAGGTTCTTTCAGAAGACCTGCGTCAAATTTTCAACGTAGATCCCCCGTGCCTCGGGTGAAGTATCAACCAATTTACCCTGGGGAAAGTATTGTTGACTCGACCAATGGTATGAATTCAAAAGGTATGAAACTTAATGGAACAGAAACAGGTTCTCAACTGAAAGCAAAGGTATGGACTAGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGAGACACAGAACAGGAGCCAGAGGTGGACCAAGAGTTTGAAATGGAACCAGAGGCTGAAACATATGACCTAGAGCATGAAGCTGATGAAATGGAGCCTGAACTTGTTAATTTGTTAGGTGTGTCATCAGACATCGATGACACGTTTGAGGATGATATTAAAGACAATGAGGAATTTTCAAAGCATGGTGAACATGAGAACTTAAACTCATTGAAACTTGCTGAACTAAGAGCAATTGCTAAATCTCGTAGTTTGAGAGGGTTTTCAAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACAGTCATTGA

Protein sequence

MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNSH

Homology

[Close]

BLAST of IVF0002059.1 vs. ExPASy Swiss-Prot
Match: Q94K75 (Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RHON1 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.7e-55
Identity = 173/410 (42.20%), Postives = 240/410 (58.54%), Query Frame = 0


Query: 30  FFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GHR 89
           + + DSRC   S VS R  +    S C +H      K   L       SF C+ASS G+R
Sbjct: 17  YTLSDSRCFFNSAVSRRTLAILPCSSCLDH------KNGRLKSVPNRSSFVCRASSGGYR 76

Query: 90  RNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPGP 149
           RNPDF + N+ GY R  NRQ+  RE  + ++ SD+LSSRNGPL ++SS+PK QAT++PGP
Sbjct: 77  RNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPGP 136

Query: 150 REKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHAVEQGKR 209
           REKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKH+ EQ KR
Sbjct: 137 REKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKR 196

Query: 210 SSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 269
                 S  ++  + V +    D        G   N        A SF RP S+F+R+SP
Sbjct: 197 QVSKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDN-------NASSFTRPTSSFRRKSP 256

Query: 270 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 329
           VPR +  P Y  E+  D ++           + T +Q K  V    E E E   E + + 
Sbjct: 257 VPRSQSPPAYSSEATFDQSSSY---------SVTWTQKKDTVELHDEPEHEPAYEHEHEP 316

Query: 330 DTEQEP-----EVDQEFEMEPEAETYDLEHEADEMEPELVN----LLGVSSDIDDTFEDD 389
           + E EP      ++ + E++PE+ ++  E E D++  ++++    +L V SD D++ +D 
Sbjct: 317 ENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSDDDESLDDA 376

Query: 390 IKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 427
            +D++E  +    ++L+ LKL ELR IAKSR L+G SKMKK+ELV+LL +
Sbjct: 377 DEDSDEAEEEAV-KDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

[Close]

BLAST of IVF0002059.1 vs. ExPASy Swiss-Prot
Match: Q8L4E7 (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.7e-38
Identity = 128/358 (35.75%), Postives = 205/358 (57.26%), Query Frame = 0


Query: 77  VSFTCKAS-SGHR-RNPDFPKQNRQGYSRSRNRQNEERESLENVDE--SDLLSSRNGPLL 136
           +S  C A+ + HR R+ D  +  + G +R +++  +E++  EN+DE  +D++SS+NGP +
Sbjct: 38  LSLVCSANPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPI 97

Query: 137 SISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSE-TVDSL 196
           S++S  + QAT+ PG REKEIVELF++VQAQLR R   KEEKK E Q + +G   +VDSL
Sbjct: 98  SLTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPE-QAKAQGERGSVDSL 157

Query: 197 LKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAG 256
           L LLRKH+V+Q ++S    G  K+ S +  K +      + SSIF  +    E+ +    
Sbjct: 158 LNLLRKHSVDQRRKS----GDEKEQSVDQTKRSNESGNKQNSSIFIKNDTQEEQKKPHPA 217

Query: 257 SFRRPASNFQRRSPVPRVKYQPI--YPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWT 316
           +F+RPASNF+RRSPVP VK+QP+     E ++++ N    +       +  +     V T
Sbjct: 218 AFKRPASNFRRRSPVPNVKFQPVTNVDAERVINNINDAVQEAKPTLENKAATDEPDSVST 277

Query: 317 RQESEREHWEELQSQRDTEQEPEVDQEFEMEPEA-ETYDLEHEADEMEPELVNLLGVSSD 376
            + +     E L          ++D   + EP+A +T +   E DE   ++ ++  +   
Sbjct: 278 FEPNSVIEPENLSLD-------DLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPIIDES 337

Query: 377 IDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 427
            D T +  +             +L++LK+ ELR +AKSR ++G+SKMKK++LV+LLSN
Sbjct: 338 HDTTLKSSLGG----------PDLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLSN 373

[Close]

BLAST of IVF0002059.1 vs. ExPASy TrEMBL
Match: A0A1S3BHD7 (rho-N domain-containing protein 1, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 4.4e-234
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60
           MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG
Sbjct: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60

Query: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120
           INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE
Sbjct: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180
           SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240
           QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240

Query: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300
           NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG
Sbjct: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300

Query: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360
           SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV
Sbjct: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360

Query: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420
           NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL
Sbjct: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420

Query: 421 VQLLSNSH 429
           VQLLSNSH
Sbjct: 421 VQLLSNSH 428

[Close]

BLAST of IVF0002059.1 vs. ExPASy TrEMBL
Match: A0A1S4DWS1 (rho-N domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 3.1e-232
Identity = 428/433 (98.85%), Postives = 428/433 (98.85%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVE-----DSRCLPCSGVSGRAASFSFRSL 60
           MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVE     DSRCLPCSGVSGRAASFSFRSL
Sbjct: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSL 60

Query: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120
           CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL
Sbjct: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120

Query: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180
           ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK
Sbjct: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180

Query: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240
           MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI
Sbjct: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240

Query: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300
           FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN
Sbjct: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300

Query: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360
           GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM
Sbjct: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360

Query: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420
           EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM
Sbjct: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420

Query: 421 KKSELVQLLSNSH 429
           KKSELVQLLSNSH
Sbjct: 421 KKSELVQLLSNSH 433

[Close]

BLAST of IVF0002059.1 vs. ExPASy TrEMBL
Match: A0A1S3BIA8 (rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 2.7e-228
Identity = 422/428 (98.60%), Postives = 422/428 (98.60%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60
           MSQAIHLLPRNPT      GGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG
Sbjct: 1   MSQAIHLLPRNPT------GGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60

Query: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120
           INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE
Sbjct: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180
           SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240
           QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240

Query: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300
           NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG
Sbjct: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300

Query: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360
           SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV
Sbjct: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360

Query: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420
           NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL
Sbjct: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420

Query: 421 VQLLSNSH 429
           VQLLSNSH
Sbjct: 421 VQLLSNSH 422

[Close]

BLAST of IVF0002059.1 vs. ExPASy TrEMBL
Match: A0A1S4DXI1 (rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 2.0e-226
Identity = 422/433 (97.46%), Postives = 422/433 (97.46%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVE-----DSRCLPCSGVSGRAASFSFRSL 60
           MSQAIHLLPRNPT      GGKFEVGEVFFFVE     DSRCLPCSGVSGRAASFSFRSL
Sbjct: 1   MSQAIHLLPRNPT------GGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSL 60

Query: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120
           CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL
Sbjct: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120

Query: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180
           ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK
Sbjct: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180

Query: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240
           MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI
Sbjct: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240

Query: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300
           FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN
Sbjct: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300

Query: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360
           GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM
Sbjct: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360

Query: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420
           EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM
Sbjct: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420

Query: 421 KKSELVQLLSNSH 429
           KKSELVQLLSNSH
Sbjct: 421 KKSELVQLLSNSH 427

[Close]

BLAST of IVF0002059.1 vs. ExPASy TrEMBL
Match: A0A1S3BHE0 (rho-N domain-containing protein 1, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 783.1 bits (2021), Expect = 5.9e-223
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 18  MIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGV 77
           MIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGV
Sbjct: 1   MIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGV 60

Query: 78  SFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISST 137
           SFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISST
Sbjct: 61  SFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISST 120

Query: 138 PKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRK 197
           PKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRK
Sbjct: 121 PKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRK 180

Query: 198 HAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPA 257
           HAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPA
Sbjct: 181 HAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPA 240

Query: 258 SNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREH 317
           SNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREH
Sbjct: 241 SNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREH 300

Query: 318 WEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDI 377
           WEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDI
Sbjct: 301 WEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDI 360

Query: 378 KDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNSH 429
           KDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNSH
Sbjct: 361 KDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNSH 411

[Close]

BLAST of IVF0002059.1 vs. NCBI nr
Match: XP_008447417.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 822 bits (2122), Expect = 1.06e-299
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60
           MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG
Sbjct: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60

Query: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120
           INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE
Sbjct: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180
           SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240
           QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240

Query: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300
           NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG
Sbjct: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300

Query: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360
           SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV
Sbjct: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360

Query: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420
           NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL
Sbjct: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420

Query: 421 VQLLSNSH 428
           VQLLSNSH
Sbjct: 421 VQLLSNSH 428

[Close]

BLAST of IVF0002059.1 vs. NCBI nr
Match: XP_016900423.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 815 bits (2106), Expect = 3.51e-297
Identity = 428/433 (98.85%), Postives = 428/433 (98.85%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVE-----DSRCLPCSGVSGRAASFSFRSL 60
           MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVE     DSRCLPCSGVSGRAASFSFRSL
Sbjct: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSL 60

Query: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120
           CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL
Sbjct: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120

Query: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180
           ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK
Sbjct: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180

Query: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240
           MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI
Sbjct: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240

Query: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300
           FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN
Sbjct: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300

Query: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360
           GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM
Sbjct: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360

Query: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420
           EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM
Sbjct: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420

Query: 421 KKSELVQLLSNSH 428
           KKSELVQLLSNSH
Sbjct: 421 KKSELVQLLSNSH 433

[Close]

BLAST of IVF0002059.1 vs. NCBI nr
Match: XP_008447419.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X6 [Cucumis melo])

HSP 1 Score: 802 bits (2072), Expect = 3.52e-292
Identity = 422/428 (98.60%), Postives = 422/428 (98.60%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60
           MSQAIHLLPRNPT      GGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG
Sbjct: 1   MSQAIHLLPRNPT------GGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHG 60

Query: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120
           INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE
Sbjct: 61  INVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180
           SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240
           QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240

Query: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300
           NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG
Sbjct: 241 NLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETG 300

Query: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360
           SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV
Sbjct: 301 SQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELV 360

Query: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420
           NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL
Sbjct: 361 NLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSEL 420

Query: 421 VQLLSNSH 428
           VQLLSNSH
Sbjct: 421 VQLLSNSH 422

[Close]

BLAST of IVF0002059.1 vs. NCBI nr
Match: XP_016900425.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X4 [Cucumis melo])

HSP 1 Score: 796 bits (2056), Expect = 1.17e-289
Identity = 422/433 (97.46%), Postives = 422/433 (97.46%), Query Frame = 0


Query: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVE-----DSRCLPCSGVSGRAASFSFRSL 60
           MSQAIHLLPRNPT      GGKFEVGEVFFFVE     DSRCLPCSGVSGRAASFSFRSL
Sbjct: 1   MSQAIHLLPRNPT------GGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSL 60

Query: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120
           CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL
Sbjct: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESL 120

Query: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180
           ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK
Sbjct: 121 ENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK 180

Query: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240
           MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI
Sbjct: 181 MEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSI 240

Query: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300
           FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN
Sbjct: 241 FGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLN 300

Query: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360
           GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM
Sbjct: 301 GTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEM 360

Query: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420
           EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM
Sbjct: 361 EPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKM 420

Query: 421 KKSELVQLLSNSH 428
           KKSELVQLLSNSH
Sbjct: 421 KKSELVQLLSNSH 427

[Close]

BLAST of IVF0002059.1 vs. NCBI nr
Match: XP_008447422.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X8 [Cucumis melo])

HSP 1 Score: 784 bits (2025), Expect = 3.37e-285
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 18  MIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGV 77
           MIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGV
Sbjct: 1   MIGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGV 60

Query: 78  SFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISST 137
           SFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISST
Sbjct: 61  SFTCKASSGHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISST 120

Query: 138 PKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRK 197
           PKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRK
Sbjct: 121 PKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRK 180

Query: 198 HAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPA 257
           HAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPA
Sbjct: 181 HAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPA 240

Query: 258 SNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREH 317
           SNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREH
Sbjct: 241 SNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREH 300

Query: 318 WEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDI 377
           WEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDI
Sbjct: 301 WEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDI 360

Query: 378 KDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNSH 428
           KDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNSH
Sbjct: 361 KDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNSH 411

[Close]

BLAST of IVF0002059.1 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor )

HSP 1 Score: 217.6 bits (553), Expect = 1.9e-56
Identity = 173/410 (42.20%), Postives = 240/410 (58.54%), Query Frame = 0


Query: 30  FFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GHR 89
           + + DSRC   S VS R  +    S C +H      K   L       SF C+ASS G+R
Sbjct: 17  YTLSDSRCFFNSAVSRRTLAILPCSSCLDH------KNGRLKSVPNRSSFVCRASSGGYR 76

Query: 90  RNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPGP 149
           RNPDF + N+ GY R  NRQ+  RE  + ++ SD+LSSRNGPL ++SS+PK QAT++PGP
Sbjct: 77  RNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPGP 136

Query: 150 REKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHAVEQGKR 209
           REKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKH+ EQ KR
Sbjct: 137 REKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKR 196

Query: 210 SSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 269
                 S  ++  + V +    D        G   N        A SF RP S+F+R+SP
Sbjct: 197 QVSKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDN-------NASSFTRPTSSFRRKSP 256

Query: 270 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 329
           VPR +  P Y  E+  D ++           + T +Q K  V    E E E   E + + 
Sbjct: 257 VPRSQSPPAYSSEATFDQSSSY---------SVTWTQKKDTVELHDEPEHEPAYEHEHEP 316

Query: 330 DTEQEP-----EVDQEFEMEPEAETYDLEHEADEMEPELVN----LLGVSSDIDDTFEDD 389
           + E EP      ++ + E++PE+ ++  E E D++  ++++    +L V SD D++ +D 
Sbjct: 317 ENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSDDDESLDDA 376

Query: 390 IKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 427
            +D++E  +    ++L+ LKL ELR IAKSR L+G SKMKK+ELV+LL +
Sbjct: 377 DEDSDEAEEEAV-KDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

[Close]

BLAST of IVF0002059.1 vs. TAIR 10
Match: AT1G06190.2 (Rho termination factor )

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-43
Identity = 124/260 (47.69%), Postives = 157/260 (60.38%), Query Frame = 0


Query: 30  FFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GHR 89
           + + DSRC   S VS R  +    S C +H      K   L       SF C+ASS G+R
Sbjct: 17  YTLSDSRCFFNSAVSRRTLAILPCSSCLDH------KNGRLKSVPNRSSFVCRASSGGYR 76

Query: 90  RNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPGP 149
           RNPDF + N+ GY R  NRQ+  RE  + ++ SD+LSSRNGPL ++SS+PK QAT++PGP
Sbjct: 77  RNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPGP 136

Query: 150 REKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHAVEQGKR 209
           REKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKH+ EQ KR
Sbjct: 137 REKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKR 196

Query: 210 SSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 269
                 S  ++  + V +    D        G   N        A SF RP S+F+R+SP
Sbjct: 197 QVSKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDN-------NASSFTRPTSSFRRKSP 256

Query: 270 VPRVKYQPIYPGESIVDSTN 286
           VPR +  P Y  E+  D ++
Sbjct: 257 VPRSQSPPAYSSEATFDQSS 258

[Close]

BLAST of IVF0002059.1 vs. TAIR 10
Match: AT2G31150.1 (ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism )

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-22
Identity = 118/314 (37.58%), Postives = 158/314 (50.32%), Query Frame = 0


Query: 87  HRR-NPDFPKQNRQGYSRSRNRQNEERESL-ENVDESDLLSSRNGPLLSISSTPKSQATA 146
           HRR NPDF + N+ G+ R RNR+NE+++ L +   E D+LSS+N                
Sbjct: 26  HRRNNPDFSRNNKHGF-RGRNRRNEDKDGLVDGGLEDDMLSSKN---------------- 85

Query: 147 TPGPREKEIVELFRKVQAQLRER-AAMKEEKKMEAQGQTKG---SETVDSLLKLLRKHAV 206
                EKEIVELF+KVQ QLR R AA KEEKK E   + +G   SETVDSLLKLLRKH+ 
Sbjct: 86  -----EKEIVELFKKVQVQLRARAAAKKEEKKTEEASKGQGGKESETVDSLLKLLRKHSG 145

Query: 207 EQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNF 266
           EQ K+      S K +  +   ++    +   SS F    + R K    A  F RPAS+F
Sbjct: 146 EQSKKQVSNFNSEKQLQRD---DDASERQNHSSSRF----DSRNK-DHNATPFTRPASSF 205

Query: 267 QRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEE 326
           +R SPVPR K Q  Y  E+I D  +           + T +Q K +V +R E E E   E
Sbjct: 206 KRNSPVPRHKSQASYSSEAIFDEASSY---------SVTWTQKKDQVESRDEPEYEPEPE 265

Query: 327 LQSQRDTEQEPEVDQEFEMEPE-----------AETYDLEHEADEMEPELVNLLGVSSDI 384
             ++ D E EPE + E E EPE            E++  E + DE +   V        I
Sbjct: 266 SAAEYD-EPEPEAEYEPESEPELAILESVSELKLESFYQEEDEDEEDHNFV--------I 291

The following BLAST results are available for this feature:

BLAST of IVF0002059.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K75	2.7e-55	42.20	Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q8L4E7	8.7e-38	35.75	SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV...	[more]

BLAST of IVF0002059.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHD7	4.4e-234	100.00	rho-N domain-containing protein 1, chloroplastic isoform X3 OS=Cucumis melo OX=3...	[more]
A0A1S4DWS1	3.1e-232	98.85	rho-N domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]
A0A1S3BIA8	2.7e-228	98.60	rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3...	[more]
A0A1S4DXI1	2.0e-226	97.46	rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3...	[more]
A0A1S3BHE0	5.9e-223	100.00	rho-N domain-containing protein 1, chloroplastic isoform X8 OS=Cucumis melo OX=3...	[more]

BLAST of IVF0002059.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447417.1	1.06e-299	100.00	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X3 [Cucumis ...	[more]
XP_016900423.1	3.51e-297	98.85	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis ...	[more]
XP_008447419.1	3.52e-292	98.60	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X6 [Cucumis ...	[more]
XP_016900425.1	1.17e-289	97.46	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X4 [Cucumis ...	[more]
XP_008447422.1	3.37e-285	100.00	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X8 [Cucumis ...	[more]

BLAST of IVF0002059.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06190.1	1.9e-56	42.20	Rho termination factor	[more]
AT1G06190.2	1.1e-43	47.69	Rho termination factor	[more]
AT2G31150.1	1.1e-22	37.58	ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..120
None	No IPR available	PANTHER	PTHR34449	RHO TERMINATION FACTOR	coord: 1..427
None	No IPR available	PANTHER	PTHR34449:SF5	RHO-N DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 1..427
IPR011112	Rho termination factor, N-terminal	PFAM	PF07498	Rho_N	coord: 392..421 e-value: 2.1E-6 score: 27.6

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0002059	IVF0002059	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002059.1-exon	IVF0002059.1-exon-chr04:13310495..13311996	exon
IVF0002059.1-exon	IVF0002059.1-exon-chr04:13312337..13312396	exon
IVF0002059.1-exon	IVF0002059.1-exon-chr04:13314628..13314698	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002059.1-three_prime_utr	IVF0002059.1-three_prime_utr-chr04:13310495..13310809	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002059.1-cds	IVF0002059.1-cds-chr04:13310810..13311996	CDS
IVF0002059.1-cds	IVF0002059.1-cds-chr04:13312337..13312396	CDS
IVF0002059.1-cds	IVF0002059.1-cds-chr04:13314628..13314667	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002059.1-five_prime_utr	IVF0002059.1-five_prime_utr-chr04:13314668..13314698	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0002059.1	IVF0002059.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination