IVF0001221.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0001221.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	pistil-specific extensin-like protein
Location	chr04: 30323833 .. 30324585 (+)
Sequence length	665
RNA-Seq Expression	IVF0001221.2
Synteny	IVF0001221.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCGACCAGATAATCAATGGAGCTTCGCTCGAAGCTCCAATGGTGGAACGCACGTCTCCAAGTAGTGCATCTCCACTTCCTTCTTCCTTCTCCTTCTCTATATGAACCTCCGCAACCCTGCCCCATCCACACACTGGCATTTACAGAGACAAAAAGCTCAAAATGGGACCTTTATTGCGCCTCACAATGGCAGCTTCACTTTTAATCGGCTGCATCAACATTGTAGCAGGCGGCGACGTCATTCATATCGGTGGAAAAGTTCTCTGCCAGGACTGCACTCAGGGCTGGAACGAGTGGATCAACGGAAAGCCTCTTAAAGGTAATACAAATCAATTATTAACGAACAAGTACTTCAAAATTGAAATCGCGTGTTTTCTAATAATGTTAATGGAGGCTCTCGATCTCAGATTGTAAGGTATCTGTAACGTGTTTGGATGAGAGAAGCAGAGTGATGCATTATGCGAGCGATCTGACGGACGAATTAGGGCAATTTGATATCACAATCAACAAGTTTATCAACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTTGTTTCGTCTCCGGATCTTGCGTGCAACGTCATGACCGATTTCGCCGGTGGTCGCTCCGGCGTTCAACTCCGGGGACCGAGCTTAGTGTATCGCGATCTTGTCAAGTATGTCCTCGGACCATTTTACTTCACTTCGCCTATGTGCGAGGAACCTGATACAAGTGGTTCCGATGATAACGACGGGAAATATTAG

mRNA sequence

CTTTCGACCAGATAATCAATGGAGCTTCGCTCGAAGCTCCAATGGTGGAACGCACGTCTCCAAGTAGTGCATCTCCACTTCCTTCTTCCTTCTCCTTCTCTATATGAACCTCCGCAACCCTGCCCCATCCACACACTGGCATTTACAGAGACAAAAAGCTCAAAATGGGACCTTTATTGCGCCTCACAATGGCAGCTTCACTTTTAATCGGCTGCATCAACATTGTAGCAGGCGGCGACGTCATTCATATCGGTGGAAAAGTTCTCTGCCAGGACTGCACTCAGGGCTGGAACGAGTGGATCAACGGAAAGCCTCTTAAAGATTGTAAGGTATCTGTAACGTGTTTGGATGAGAGAAGCAGAGTGATGCATTATGCGAGCGATCTGACGGACGAATTAGGGCAATTTGATATCACAATCAACAAGTTTATCAACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTTGTTTCGTCTCCGGATCTTGCGTGCAACGTCATGACCGATTTCGCCGGTGGTCGCTCCGGCGTTCAACTCCGGGGACCGAGCTTAGTGTATCGCGATCTTGTCAAGTATGTCCTCGGACCATTTTACTTCACTTCGCCTATGTGCGAGGAACCTGATACAAGTGGTTCCGATGATAACGACGGGAAATATTAG

Coding sequence (CDS)

ATGGGACCTTTATTGCGCCTCACAATGGCAGCTTCACTTTTAATCGGCTGCATCAACATTGTAGCAGGCGGCGACGTCATTCATATCGGTGGAAAAGTTCTCTGCCAGGACTGCACTCAGGGCTGGAACGAGTGGATCAACGGAAAGCCTCTTAAAGATTGTAAGGTATCTGTAACGTGTTTGGATGAGAGAAGCAGAGTGATGCATTATGCGAGCGATCTGACGGACGAATTAGGGCAATTTGATATCACAATCAACAAGTTTATCAACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTTGTTTCGTCTCCGGATCTTGCGTGCAACGTCATGACCGATTTCGCCGGTGGTCGCTCCGGCGTTCAACTCCGGGGACCGAGCTTAGTGTATCGCGATCTTGTCAAGTATGTCCTCGGACCATTTTACTTCACTTCGCCTATGTGCGAGGAACCTGATACAAGTGGTTCCGATGATAACGACGGGAAATATTAG

Protein sequence

MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY

Homology

[Close]

BLAST of IVF0001221.2 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05
Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 29  IGGKVLCQDC-TQGWNEWINGKPLKDCKVSVTCLDERSRVMHYASDLTDELGQFDITINK 88
           + G V C+ C + G    +N   L+   V + C  +++ V  +A+  TD  G+F I    
Sbjct: 291 VSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKKTMV-QWAT--TDNKGEFRIMPKS 350

Query: 89  FINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLR 128
                  +  KC V LV SP+  CNV T+F GG+SG  L+
Sbjct: 351 LTTA---DVGKCKVYLVKSPNPNCNVPTNFNGGKSGGLLK 384

[Close]

BLAST of IVF0001221.2 vs. ExPASy TrEMBL
Match: A0A1S3B787 (pistil-specific extensin-like protein OS=Cucumis melo OX=3656 GN=LOC103486544 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.7e-93
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60
           MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC
Sbjct: 1   MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60

Query: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120
           LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG
Sbjct: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120

Query: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 167
           RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY
Sbjct: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 166

[Close]

BLAST of IVF0001221.2 vs. ExPASy TrEMBL
Match: A0A0A0LAP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746570 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 8.5e-93
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60
           MGPLLRLTMAASLLIGCINIVA GDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC
Sbjct: 1   MGPLLRLTMAASLLIGCINIVAAGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60

Query: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120
           LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG
Sbjct: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120

Query: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 167
           RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY
Sbjct: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 166

[Close]

BLAST of IVF0001221.2 vs. ExPASy TrEMBL
Match: A0A5D3DNM9 (Pistil-specific extensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003220 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 5.7e-89
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 9   MAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVM 68
           MAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVM
Sbjct: 1   MAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVM 60

Query: 69  HYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLRG 128
           HYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLRG
Sbjct: 61  HYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLRG 120

Query: 129 PSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 167
           PSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY
Sbjct: 121 PSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 158

[Close]

BLAST of IVF0001221.2 vs. ExPASy TrEMBL
Match: A0A6J1CSG0 (pistil-specific extensin-like protein OS=Momordica charantia OX=3673 GN=LOC111014344 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.2e-80
Identity = 145/168 (86.31%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGGD---VIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           M PLLRL MAAS+LI C NIVA  D   VIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 1   MAPLLRLIMAASVLIACTNIVAAADDAGVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60

Query: 61  VTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDF 120
           VTCLDERSRVMHYASDLTDELGQFDITI+K ++GKKLNPKKCSVRLVSSPD  CN+MTDF
Sbjct: 61  VTCLDERSRVMHYASDLTDELGQFDITIDKLVHGKKLNPKKCSVRLVSSPDPTCNIMTDF 120

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGK 166
           AGGRSGVQLRGPSL YRD VKYVLGPFYFTSPMCEEP+T  SDDN+GK
Sbjct: 121 AGGRSGVQLRGPSLTYRDFVKYVLGPFYFTSPMCEEPNTDDSDDNNGK 168

[Close]

BLAST of IVF0001221.2 vs. ExPASy TrEMBL
Match: A0A6J1F3T9 (uncharacterized protein LOC111442130 OS=Cucurbita moschata OX=3662 GN=LOC111442130 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 145/167 (86.83%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGG---DVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAAS+LIGCINIVA     D+IHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 24  MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 83

Query: 61  VTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDF 120
           VTCLDERSRV+HY SDLTDELGQFDI + K ++GK LNPKKCSVRLVSSPD +CN MTDF
Sbjct: 84  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 143

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDG 165
           AGGRSGVQLRGPSLVYRDLVKYVL PFYFTSPMCEEPDT GSDDN G
Sbjct: 144 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGG 190

[Close]

BLAST of IVF0001221.2 vs. NCBI nr
Match: XP_008442766.1 (PREDICTED: pistil-specific extensin-like protein [Cucumis melo])

HSP 1 Score: 348 bits (893), Expect = 3.73e-121
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60
           MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC
Sbjct: 1   MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60

Query: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120
           LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG
Sbjct: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120

Query: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 166
           RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY
Sbjct: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 166

[Close]

BLAST of IVF0001221.2 vs. NCBI nr
Match: XP_004137994.2 (pistil-specific extensin-like protein [Cucumis sativus] >KGN59025.1 hypothetical protein Csa_001709 [Cucumis sativus])

HSP 1 Score: 346 bits (887), Expect = 3.07e-120
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60
           MGPLLRLTMAASLLIGCINIVA GDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC
Sbjct: 1   MGPLLRLTMAASLLIGCINIVAAGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC 60

Query: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120
           LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG
Sbjct: 61  LDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGG 120

Query: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 166
           RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY
Sbjct: 121 RSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 166

[Close]

BLAST of IVF0001221.2 vs. NCBI nr
Match: KAA0043946.1 (pistil-specific extensin-like protein [Cucumis melo var. makuwa] >TYK25194.1 pistil-specific extensin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (854), Expect = 2.51e-115
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 9   MAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVM 68
           MAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVM
Sbjct: 1   MAASLLIGCINIVAGGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVM 60

Query: 69  HYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLRG 128
           HYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLRG
Sbjct: 61  HYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDFAGGRSGVQLRG 120

Query: 129 PSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 166
           PSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY
Sbjct: 121 PSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGKY 158

[Close]

BLAST of IVF0001221.2 vs. NCBI nr
Match: XP_038905672.1 (pistil-specific extensin-like protein [Benincasa hispida])

HSP 1 Score: 315 bits (808), Expect = 4.08e-108
Identity = 151/169 (89.35%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGG----DVIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLTMAAS+LIGCINI+A      DVIHIGGKVLCQDCTQGWNEW NGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASVLIGCINIIAAANEANDVIHIGGKVLCQDCTQGWNEWNNGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTD 120
           SVTCLDERSRVMHYASDLTDELGQFDI I KFI+GKKLNPKKCSVRLVSSPD  CN+MTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDIAIAKFIHGKKLNPKKCSVRLVSSPDPTCNIMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGK 165
           FAGGRSG+QLRGPSLVYRD VKYVLGPFYFTSPMCEEPDT GSDDNDGK
Sbjct: 121 FAGGRSGIQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGK 169

[Close]

BLAST of IVF0001221.2 vs. NCBI nr
Match: XP_023528335.1 (uncharacterized protein LOC111791287 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306 bits (785), Expect = 6.91e-104
Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MGPLLRLTMAASLLIGCINIVAGG---DVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAAS+LIGCINIVA     D+IHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 49  MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 108

Query: 61  VTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDF 120
           VTCLDERSRV+HY SDLTDELGQFDI + K ++GKKLNPKKCSVRLVSSPD +CN MTDF
Sbjct: 109 VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKKLNPKKCSVRLVSSPDPSCNTMTDF 168

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDG 164
           AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDT GSDDN G
Sbjct: 169 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTDGSDDNGG 215

[Close]

BLAST of IVF0001221.2 vs. TAIR 10
Match: AT3G09925.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 184.1 bits (466), Expect = 9.1e-47
Identity = 85/158 (53.80%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 5   LRLTMAASLLIGCINIVA------GGDVIHIGGKVLCQDCTQGWNEWING-KPLKDCKVS 64
           L L +    L+ C+  +        GD IH+ GKV+CQDC+  ++EWING +P+K   VS
Sbjct: 8   LVLLIEILFLVSCVTHITTTAAYNNGDKIHVAGKVMCQDCSLNYDEWINGSEPIKGAVVS 67

Query: 65  VTCLDERSRVMHYASDLTDELGQFDITINKFI-NGKKLNPKKCSVRLVSSPDLACNVMTD 124
           +TC+DER RV +Y SDLTDE GQFD+ +NK + +GK L P+ C+VRLVSSPDL+CN+ T+
Sbjct: 68  ITCMDERRRVSYYGSDLTDERGQFDLMVNKVLSHGKVLKPQLCNVRLVSSPDLSCNIPTN 127

Query: 125 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEP 155
           F  G++GV+L  P  V+RDLVKYV+GPFY+T+PMCE P
Sbjct: 128 FGNGQTGVKLVRPFTVFRDLVKYVVGPFYYTTPMCETP 165

The following BLAST results are available for this feature:

BLAST of IVF0001221.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03211	2.2e-05	33.00	Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of IVF0001221.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B787	1.7e-93	100.00	pistil-specific extensin-like protein OS=Cucumis melo OX=3656 GN=LOC103486544 PE...	[more]
A0A0A0LAP0	8.5e-93	99.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746570 PE=4 SV=1	[more]
A0A5D3DNM9	5.7e-89	100.00	Pistil-specific extensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1CSG0	8.2e-80	86.31	pistil-specific extensin-like protein OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1F3T9	1.8e-79	86.83	uncharacterized protein LOC111442130 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of IVF0001221.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442766.1	3.73e-121	100.00	PREDICTED: pistil-specific extensin-like protein [Cucumis melo]	[more]
XP_004137994.2	3.07e-120	99.40	pistil-specific extensin-like protein [Cucumis sativus] >KGN59025.1 hypothetical...	[more]
KAA0043946.1	2.51e-115	100.00	pistil-specific extensin-like protein [Cucumis melo var. makuwa] >TYK25194.1 pis...	[more]
XP_038905672.1	4.08e-108	89.35	pistil-specific extensin-like protein [Benincasa hispida]	[more]
XP_023528335.1	6.91e-104	88.02	uncharacterized protein LOC111791287 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0001221.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09925.1	9.1e-47	53.80	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 29..123 e-value: 3.0E-21 score: 75.7
None	No IPR available	PANTHER	PTHR33470	OS01G0164075 PROTEIN	coord: 8..158
None	No IPR available	PANTHER	PTHR33470:SF29	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 8..158
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..17 score: 5.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0001221	IVF0001221	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001221.2-five_prime_utr	IVF0001221.2-five_prime_utr-chr04:30323833..30323996	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001221.2-exon	IVF0001221.2-exon-chr04:30323833..30324153	exon
IVF0001221.2-exon	IVF0001221.2-exon-chr04:30324242..30324585	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001221.2-cds	IVF0001221.2-cds-chr04:30323997..30324153	CDS
IVF0001221.2-cds	IVF0001221.2-cds-chr04:30324242..30324585	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0001221.2	IVF0001221.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071944	cell periphery