IVF0001082.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0001082.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr04: 9885284 .. 9886828 (-)
Sequence length	1098
RNA-Seq Expression	IVF0001082.2
Synteny	IVF0001082.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAGCAAACCAATGATCAAGTTCAAGTAGTTCGTCAAGAAATTGAAGGATTGAAAGATCAATTGTCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCGGAGATTTCATCACAAATGGAAGTAGATCTAAACCAAGTACTAGAGGACATGCCTGCATACCCTCCAGGTCTTACTCCTCAAAGGTCGTCTAGTCCTCGTATGGTGGATAGGACATATCCTATATCCTTTCTCGCACAAAATCCTAATCCGACCTCAAAACAGACAGCCCATGTGAGTGATTCCGTATCTACTCCAATTACAAAAATTGGTAAGAAAATTTCAGAAGAGTAGGGTAGTAGGAGAAGACTGAAATTTCTAGAAGAAAGATTGTGCGTCATTGAAGGTGCAGACATGTACGGGAGTATCAACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCCAAATTTAAGACTCTAGAGTTTGAGAAGTACAATGGAACCACGTGCTTCAAAAGTCATCTAGTTATGTACTGTCAGAAAATGTTAGCTTACGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGATACCTTAGTTGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCAAAAGTGCATAGGTAAAAGGATCTTGCTGATTCATTCTATAAACAATACAAGTACAACATTGATTTGGCACCCGATCATCTAAATCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTGACCGATAAAGAATTGACAACCATGTTCATAAACACTCTTCAGGCCTTATACTATGATAGAATGTTTGAAAGTGCTTCAACTAATTTCTCAAACGTCATAACAATTCGGGAGCGGATTGAATTTGGAGTGAAGAATGGAAGGATCGCTGATCCTGTTTCAGAGACAAGAAAAATGGTGACTCCAAAGAAAAAAGAGGGAGAAGTACACGAGTTGAGCTCGACTCAAAGAGTAGTGACACGTGTATCCTCACCAACTGTGAGACAGAAAAATTACTCTCCTAGTTATCAGAATGGAGGTCAAAGCCCATTTGGTCAGGCAACTCAAAGAAACATAAGGAACAATTGGAAGCAAACTCGTTTTGATCCCATACCTATGTCATACATAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAATGGTTACCGTACTACAAGAGCCTCTACAACCACCCTATCCTAAGTGGTATGACCCCAACGCAAAATGTGAATATCATGTTGGAGCAGTAGGGCATTCTATGGAGAATTTTTTTCTTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAGGCTGGTTGGTTGAAATTCAAGAAGATAGGGGAAGAGCCTGATGTCAACCAGAACCATTTACCAAATCATGAGGGTCCTGCCATAAATATTGTTGACACATTCACGGAAAGACACAAGAATAAGGTGAGTAACGTAACTACTTCAATGAATACGCTTTTCTAA

mRNA sequence

ATGAATGAGCAAACCAATGATCAAGTTCAAGTAGTTCGTCAAGAAATTGAAGGATTGAAAGATCAATTGTCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCGGAGATTTCATCACAAATGGAAGTAGATCTAAACCAAGTACTAGAGGACATGCCTGCATACCCTCCAGGTCTTACTCCTCAAAGGTCGTCTAGTCCTCGTATGGTGGATAGGACATATCCTATATCCTTTCTCGCACAAAATCCTAATCCGACCTCAAAACAGACAGCCCATAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTGACCGATAAAGAATTGACAACCATGTTCATAAACACTCTTCAGGCCTTATACTATGATAGAATGTTTGAAAGTGCTTCAACTAATTTCTCAAACGTCATAACAATTCGGGAGCGGATTGAATTTGGAGTGAAGAATGGAAGGATCGCTGATCCTGTTTCAGAGACAAGAAAAATGGTGACTCCAAAGAAAAAAGAGGGAGAAGTACACGAGTTGAGCTCGACTCAAAGAGTAGTGACACGTGTATCCTCACCAACTGTGAGACAGAAAAATTACTCTCCTAGTTATCAGAATGGAGGTCAAAGCCCATTTGGTCAGGCAACTCAAAGAAACATAAGGAACAATTGGAAGCAAACTCGTTTTGATCCCATACCTATGTCATACATAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAATGGTTACCGTACTACAAGAGCCTCTACAACCACCCTATCCTAAGTGGTATGACCCCAACGCAAAATGTGAATATCATGTTGGAGCAGTAGGGCATTCTATGGAGAATTTTTTTCTTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAGGCTGGTTGGTTGAAATTCAAGAAGATAGGGGAAGAGCCTGATGTCAACCAGAACCATTTACCAAATCATGAGGGTCCTGCCATAAATATTGTTGACACATTCACGGAAAGACACAAGAATAAGGTGAGTAACGTAACTACTTCAATGAATACGCTTTTCTAA

Coding sequence (CDS)

ATGAATGAGCAAACCAATGATCAAGTTCAAGTAGTTCGTCAAGAAATTGAAGGATTGAAAGATCAATTGTCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCGGAGATTTCATCACAAATGGAAGTAGATCTAAACCAAGTACTAGAGGACATGCCTGCATACCCTCCAGGTCTTACTCCTCAAAGGTCGTCTAGTCCTCGTATGGTGGATAGGACATATCCTATATCCTTTCTCGCACAAAATCCTAATCCGACCTCAAAACAGACAGCCCATAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTGACCGATAAAGAATTGACAACCATGTTCATAAACACTCTTCAGGCCTTATACTATGATAGAATGTTTGAAAGTGCTTCAACTAATTTCTCAAACGTCATAACAATTCGGGAGCGGATTGAATTTGGAGTGAAGAATGGAAGGATCGCTGATCCTGTTTCAGAGACAAGAAAAATGGTGACTCCAAAGAAAAAAGAGGGAGAAGTACACGAGTTGAGCTCGACTCAAAGAGTAGTGACACGTGTATCCTCACCAACTGTGAGACAGAAAAATTACTCTCCTAGTTATCAGAATGGAGGTCAAAGCCCATTTGGTCAGGCAACTCAAAGAAACATAAGGAACAATTGGAAGCAAACTCGTTTTGATCCCATACCTATGTCATACATAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAATGGTTACCGTACTACAAGAGCCTCTACAACCACCCTATCCTAAGTGGTATGACCCCAACGCAAAATGTGAATATCATGTTGGAGCAGTAGGGCATTCTATGGAGAATTTTTTTCTTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAGGCTGGTTGGTTGAAATTCAAGAAGATAGGGGAAGAGCCTGATGTCAACCAGAACCATTTACCAAATCATGAGGGTCCTGCCATAAATATTGTTGACACATTCACGGAAAGACACAAGAATAAGGTGAGTAACGTAACTACTTCAATGAATACGCTTTTCTAA

Protein sequence

MNEQTNDQVQVVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYPPGLTPQRSSSPRMVDRTYPISFLAQNPNPTSKQTAHRMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYDRMFESASTNFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVTRVSSPTVRQKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQMVTVLQEPLQPPYPKWYDPNAKCEYHVGAVGHSMENFFLLKAKVQSLVKAGWLKFKKIGEEPDVNQNHLPNHEGPAINIVDTFTERHKNKVSNVTTSMNTLF

Homology

[Close]

BLAST of IVF0001082.2 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 3.2e-153
Identity = 307/514 (59.73%), Postives = 327/514 (63.62%), Query Frame = 0


Query: 1   MNEQTNDQVQVVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYP 60
           M+EQTNDQVQ VRQ++EGLKDQL+KILELLTTGRGKSV   SSQ+EVDLNQVLEDMP YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGLTPQRSSSPRMVDRTYPISFLAQNPNPTSKQTAH------------------------ 120
           PG TPQRSSSPRM DRTYP SF A NPN T++Q AH                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 -----RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYDRMFESAST 300
                RMEKKNVETFKEYAQRWREL AQVQPPLTDKELT MFINTL+A YYDRM  SAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVTRVSSPTVR 360
           NFS+VITI ERIEFGVKNGRI+DP SETR+++TPKKKEGEVHELSSTQRV TRVSSP V 
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQMVTVLQEP 366
           Q N+SPSYQNGGQSPFGQ+TQRNIRNNWKQTRFDPIPMSY ELLPQL+KSHQ+  V QEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

[Close]

BLAST of IVF0001082.2 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.7e-152
Identity = 306/514 (59.53%), Postives = 327/514 (63.62%), Query Frame = 0


Query: 1   MNEQTNDQVQVVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYP 60
           M+EQTNDQVQ VRQ++EGLKDQL+KILELLTTGRGKSVA  SSQ+EVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGLTPQRSSSPRMVDRTYPISFLAQNPNPTSKQTAH------------------------ 120
           PG TPQRSSSPRM DRTYP SF   NPN T++Q AH                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 -----RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYDRMFESAST 300
                RMEKKNVETFKEYAQRWREL AQVQPP TDKELT MFINTL+A YYDRM  SAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVTRVSSPTVR 360
           NFS+VITI ERIEFGVKN RI+DP SETR+++TPKKKEGEVHELSSTQRV TRVSSP V 
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQMVTVLQEP 366
           Q N+SPSYQNGGQSPFGQ+TQRNIRNNWKQTRFDPIPMSY ELLPQL+KSHQ+  V QEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

[Close]

BLAST of IVF0001082.2 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.9e-151
Identity = 297/475 (62.53%), Postives = 318/475 (66.95%), Query Frame = 0


Query: 12   VRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYPPGLTPQRSSSP 71
            +RQ++EGLKDQL+KILELLTTGRGKSV   SSQ+EVDLNQVLEDMPAYPPG TPQRSSSP
Sbjct: 601  LRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP 660

Query: 72   RMVDRTYPISFLAQNPNPTSKQTAH----------------------------------- 131
            RM DRTYP SF A NPN T++Q AH                                   
Sbjct: 661  RMGDRTYPTSFPAPNPNTTTQQEAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRV 720

Query: 132  ------------------------------------------------------------ 191
                                                                        
Sbjct: 721  IEDFEKYNGTSCPKSHLVMYCRKMSAYAHDDKLLIHCFQDSLVDPASRWYMQLDGSQVHR 780

Query: 192  --------------------------RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELT 251
                                      RMEKKNVETFKEYAQRWREL AQVQPPLTDKELT
Sbjct: 781  WKDLADSFLKQYKYNIDMAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELT 840

Query: 252  TMFINTLQALYYDRMFESASTNFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEG 311
             MFINTL+A YYDRM  SASTNFS+VITI ERIEFGVKNGRI+DP SETR+++TPKKKEG
Sbjct: 841  AMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEG 900

Query: 312  EVHELSSTQRVVTRVSSPTVRQKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMS 366
            EVHELSSTQRV TRVSSP V Q N+SPSYQNGGQSPFGQ+TQRNIRNNWKQTRFDPIPMS
Sbjct: 901  EVHELSSTQRVATRVSSPIVGQTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMS 960

[Close]

BLAST of IVF0001082.2 vs. ExPASy TrEMBL
Match: A0A5A7UGP0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00490 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.8e-149
Identity = 292/461 (63.34%), Postives = 321/461 (69.63%), Query Frame = 0


Query: 1   MNEQTNDQVQVVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYP 60
           M+EQTNDQVQ V Q++EGLKDQL+KILELLTTGRGKSVA ISSQ+EVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVCQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGLTPQRSSSPRMVDRTYPISFLAQNPNPTSKQT-------------------------- 120
            G  PQRSSSPRMVD+TYP SF AQNPNPT++Q                           
Sbjct: 61  LGFIPQRSSSPRMVDKTYPTSFPAQNPNPTTQQADHASDPISTSITESGVDMYGSINAAQ 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 LCLISDVVIPPKFKTSDFEKYNGTTCPKSLVMYCRKMSAYAHDDKLLIHCFQDSLVGSTS 180

Query: 181 ----------AHRMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYDR 240
                      HR ++KNVETFK+YAQRWREL AQVQPPLTDKELT MFINTL+A YY+R
Sbjct: 181 RWNMQLDGSQVHRWKRKNVETFKKYAQRWRELAAQVQPPLTDKELTVMFINTLRAPYYNR 240

Query: 241 MFESASTNFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVTR 300
           M  SASTNFSNVITI+ERIEF VKNGRI D   ETR+M+TPKKKEGE+HELSSTQRVV  
Sbjct: 241 MVGSASTNFSNVITIKERIEFVVKNGRITDSSLETRRMMTPKKKEGEIHELSSTQRVV-H 300

Query: 301 VSSPTVRQKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQM 360
           V SPTV QKNYSPSYQNGG+SPF QATQRNIRNNWKQT FDPIPMSY +L PQLLKSHQ+
Sbjct: 301 VFSPTVGQKNYSPSYQNGGKSPFVQATQRNIRNNWKQTHFDPIPMSYTKLSPQLLKSHQV 360

Query: 361 VTVLQEPLQPPYPKWYDPNAKCEYHVGAVGHSMENFFLLKAKVQSLVKAGWLKFKKIGEE 366
             + QEPLQPPYPKWYDPN KCEYH GAVGHSMEN F LK KVQSLV+AGWLKFKKIGEE
Sbjct: 361 AIIPQEPLQPPYPKWYDPNTKCEYHAGAVGHSMENCFPLKTKVQSLVEAGWLKFKKIGEE 420

[Close]

BLAST of IVF0001082.2 vs. ExPASy TrEMBL
Match: A0A5A7U1L8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00070 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 3.6e-136
Identity = 272/445 (61.12%), Postives = 294/445 (66.07%), Query Frame = 0


Query: 11  VVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYPPGLTPQRSSS 70
           +V Q++EGLKDQL+KILELLTTGRGKSV   SSQ+EVDLNQVLEDM AYP G TPQRSSS
Sbjct: 162 IVHQDVEGLKDQLTKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMHAYPSGFTPQRSSS 221

Query: 71  PRMVDRTYPISFLAQNPNPTSKQTAH---------------------------------- 130
           PRMVDRTYP SF   NPN T++Q AH                                  
Sbjct: 222 PRMVDRTYPTSFPTSNPNTTTQQAAHVSNPISTPITKCDVVIPPKFKTPDFEKYNGTTCS 281

Query: 131 ------------------------------------------------------------ 190
                                                                       
Sbjct: 282 KSHLVMYCWKMSAYAHDDKLLIHCFQDSLVGSASRWYMQLDGSQVHTWKDLADSFFKKYK 341

Query: 191 -------------RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYD 250
                        RMEKKNVETFKEYAQRWRELVA++QPPLTDKELT MFINTL+A YYD
Sbjct: 342 YNIDMAPDRLDLRRMEKKNVETFKEYAQRWRELVAKMQPPLTDKELTAMFINTLRAPYYD 401

Query: 251 RMFESASTNFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVT 310
           RM  SASTNF +VITI ERI+FGVKNGRI DP SETR+M+TPKKK GEVHELSSTQRV T
Sbjct: 402 RMVGSASTNFLDVITIGERIQFGVKNGRIVDPASETRRMMTPKKK-GEVHELSSTQRVST 461

Query: 311 RVSSPTVRQKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQ 349
            VSSP V Q N+SP YQNGGQSPFGQ+TQRNIRNNWKQT FDPIPMS  ELLPQLLKSHQ
Sbjct: 462 HVSSPIVGQTNFSPGYQNGGQSPFGQSTQRNIRNNWKQTPFDPIPMSSTELLPQLLKSHQ 521

[Close]

BLAST of IVF0001082.2 vs. NCBI nr
Match: KAA0053386.1 (uncharacterized protein E6C27_scaffold428G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 536 bits (1382), Expect = 3.30e-186
Identity = 292/461 (63.34%), Postives = 321/461 (69.63%), Query Frame = 0


Query: 1   MNEQTNDQVQVVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYP 60
           M+EQTNDQVQ V Q++EGLKDQL+KILELLTTGRGKSVA ISSQ+EVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVCQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGLTPQRSSSPRMVDRTYPISFLAQNPNPTSKQT-------------------------- 120
            G  PQRSSSPRMVD+TYP SF AQNPNPT++Q                           
Sbjct: 61  LGFIPQRSSSPRMVDKTYPTSFPAQNPNPTTQQADHASDPISTSITESGVDMYGSINAAQ 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 LCLISDVVIPPKFKTSDFEKYNGTTCPKSLVMYCRKMSAYAHDDKLLIHCFQDSLVGSTS 180

Query: 181 ----------AHRMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYDR 240
                      HR ++KNVETFK+YAQRWREL AQVQPPLTDKELT MFINTL+A YY+R
Sbjct: 181 RWNMQLDGSQVHRWKRKNVETFKKYAQRWRELAAQVQPPLTDKELTVMFINTLRAPYYNR 240

Query: 241 MFESASTNFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVTR 300
           M  SASTNFSNVITI+ERIEF VKNGRI D   ETR+M+TPKKKEGE+HELSSTQRVV  
Sbjct: 241 MVGSASTNFSNVITIKERIEFVVKNGRITDSSLETRRMMTPKKKEGEIHELSSTQRVV-H 300

Query: 301 VSSPTVRQKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQM 360
           V SPTV QKNYSPSYQNGG+SPF QATQRNIRNNWKQT FDPIPMSY +L PQLLKSHQ+
Sbjct: 301 VFSPTVGQKNYSPSYQNGGKSPFVQATQRNIRNNWKQTHFDPIPMSYTKLSPQLLKSHQV 360

Query: 361 VTVLQEPLQPPYPKWYDPNAKCEYHVGAVGHSMENFFLLKAKVQSLVKAGWLKFKKIGEE 365
             + QEPLQPPYPKWYDPN KCEYH GAVGHSMEN F LK KVQSLV+AGWLKFKKIGEE
Sbjct: 361 AIIPQEPLQPPYPKWYDPNTKCEYHAGAVGHSMENCFPLKTKVQSLVEAGWLKFKKIGEE 420

[Close]

BLAST of IVF0001082.2 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 547 bits (1410), Expect = 7.06e-183
Identity = 306/514 (59.53%), Postives = 327/514 (63.62%), Query Frame = 0


Query: 1   MNEQTNDQVQVVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYP 60
           M+EQTNDQVQ VRQ++EGLKDQL+KILELLTTGRGKSVA  SSQ+EVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGLTPQRSSSPRMVDRTYPISFLAQNPNPTSKQTAH------------------------ 120
           PG TPQRSSSPRM DRTYP SF   NPN T++Q AH                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 -----RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYDRMFESAST 300
                RMEKKNVETFKEYAQRWREL AQVQPP TDKELT MFINTL+A YYDRM  SAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVTRVSSPTVR 360
           NFS+VITI ERIEFGVKN RI+DP SETR+++TPKKKEGEVHELSSTQRV TRVSSP V 
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQMVTVLQEP 365
           Q N+SPSYQNGGQSPFGQ+TQRNIRNNWKQTRFDPIPMSY ELLPQL+KSHQ+  V QEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

[Close]

BLAST of IVF0001082.2 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 550 bits (1418), Expect = 1.80e-179
Identity = 307/514 (59.73%), Postives = 327/514 (63.62%), Query Frame = 0


Query: 1   MNEQTNDQVQVVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYP 60
           M+EQTNDQVQ VRQ++EGLKDQL+KILELLTTGRGKSV   SSQ+EVDLNQVLEDMP YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGLTPQRSSSPRMVDRTYPISFLAQNPNPTSKQTAH------------------------ 120
           PG TPQRSSSPRM DRTYP SF A NPN T++Q AH                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 -----RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYDRMFESAST 300
                RMEKKNVETFKEYAQRWREL AQVQPPLTDKELT MFINTL+A YYDRM  SAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVTRVSSPTVR 360
           NFS+VITI ERIEFGVKNGRI+DP SETR+++TPKKKEGEVHELSSTQRV TRVSSP V 
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQMVTVLQEP 365
           Q N+SPSYQNGGQSPFGQ+TQRNIRNNWKQTRFDPIPMSY ELLPQL+KSHQ+  V QEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

[Close]

BLAST of IVF0001082.2 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 543 bits (1400), Expect = 7.33e-174
Identity = 297/475 (62.53%), Postives = 318/475 (66.95%), Query Frame = 0


Query: 12   VRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYPPGLTPQRSSSP 71
            +RQ++EGLKDQL+KILELLTTGRGKSV   SSQ+EVDLNQVLEDMPAYPPG TPQRSSSP
Sbjct: 601  LRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP 660

Query: 72   RMVDRTYPISFLAQNPNPTSKQTAH----------------------------------- 131
            RM DRTYP SF A NPN T++Q AH                                   
Sbjct: 661  RMGDRTYPTSFPAPNPNTTTQQEAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRV 720

Query: 132  ------------------------------------------------------------ 191
                                                                        
Sbjct: 721  IEDFEKYNGTSCPKSHLVMYCRKMSAYAHDDKLLIHCFQDSLVDPASRWYMQLDGSQVHR 780

Query: 192  --------------------------RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELT 251
                                      RMEKKNVETFKEYAQRWREL AQVQPPLTDKELT
Sbjct: 781  WKDLADSFLKQYKYNIDMAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELT 840

Query: 252  TMFINTLQALYYDRMFESASTNFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEG 311
             MFINTL+A YYDRM  SASTNFS+VITI ERIEFGVKNGRI+DP SETR+++TPKKKEG
Sbjct: 841  AMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEG 900

Query: 312  EVHELSSTQRVVTRVSSPTVRQKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMS 365
            EVHELSSTQRV TRVSSP V Q N+SPSYQNGGQSPFGQ+TQRNIRNNWKQTRFDPIPMS
Sbjct: 901  EVHELSSTQRVATRVSSPIVGQTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMS 960

[Close]

BLAST of IVF0001082.2 vs. NCBI nr
Match: KAA0049672.1 (uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 494 bits (1273), Expect = 5.96e-169
Identity = 272/445 (61.12%), Postives = 294/445 (66.07%), Query Frame = 0


Query: 11  VVRQEIEGLKDQLSKILELLTTGRGKSVAEISSQMEVDLNQVLEDMPAYPPGLTPQRSSS 70
           +V Q++EGLKDQL+KILELLTTGRGKSV   SSQ+EVDLNQVLEDM AYP G TPQRSSS
Sbjct: 162 IVHQDVEGLKDQLTKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMHAYPSGFTPQRSSS 221

Query: 71  PRMVDRTYPISFLAQNPNPTSKQTAH---------------------------------- 130
           PRMVDRTYP SF   NPN T++Q AH                                  
Sbjct: 222 PRMVDRTYPTSFPTSNPNTTTQQAAHVSNPISTPITKCDVVIPPKFKTPDFEKYNGTTCS 281

Query: 131 ------------------------------------------------------------ 190
                                                                       
Sbjct: 282 KSHLVMYCWKMSAYAHDDKLLIHCFQDSLVGSASRWYMQLDGSQVHTWKDLADSFFKKYK 341

Query: 191 -------------RMEKKNVETFKEYAQRWRELVAQVQPPLTDKELTTMFINTLQALYYD 250
                        RMEKKNVETFKEYAQRWRELVA++QPPLTDKELT MFINTL+A YYD
Sbjct: 342 YNIDMAPDRLDLRRMEKKNVETFKEYAQRWRELVAKMQPPLTDKELTAMFINTLRAPYYD 401

Query: 251 RMFESASTNFSNVITIRERIEFGVKNGRIADPVSETRKMVTPKKKEGEVHELSSTQRVVT 310
           RM  SASTNF +VITI ERI+FGVKNGRI DP SETR+M+TPKKK GEVHELSSTQRV T
Sbjct: 402 RMVGSASTNFLDVITIGERIQFGVKNGRIVDPASETRRMMTPKKK-GEVHELSSTQRVST 461

Query: 311 RVSSPTVRQKNYSPSYQNGGQSPFGQATQRNIRNNWKQTRFDPIPMSYIELLPQLLKSHQ 348
            VSSP V Q N+SP YQNGGQSPFGQ+TQRNIRNNWKQT FDPIPMS  ELLPQLLKSHQ
Sbjct: 462 HVSSPIVGQTNFSPGYQNGGQSPFGQSTQRNIRNNWKQTPFDPIPMSSTELLPQLLKSHQ 521

The following BLAST results are available for this feature:

BLAST of IVF0001082.2 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0001082.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAU5	3.2e-153	59.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V681	2.7e-152	59.53	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SUT0	3.9e-151	62.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7UGP0	4.8e-149	63.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U1L8	3.6e-136	61.12	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0001082.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053386.1	3.30e-186	63.34	uncharacterized protein E6C27_scaffold428G00490 [Cucumis melo var. makuwa]	[more]
KAA0061241.1	7.06e-183	59.53	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0065293.1	1.80e-179	59.73	uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]	[more]
KAA0033221.1	7.33e-174	62.53	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0049672.1	5.96e-169	61.12	uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0001082.2 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..230

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0001082	IVF0001082	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001082.2-exon	IVF0001082.2-exon-chr04:9885284..9886093	exon
IVF0001082.2-exon	IVF0001082.2-exon-chr04:9886541..9886828	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001082.2-cds	IVF0001082.2-cds-chr04:9885284..9886093	CDS
IVF0001082.2-cds	IVF0001082.2-cds-chr04:9886541..9886828	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0001082.2	IVF0001082.2-protein	polypeptide