IVF0000494.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0000494.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ganglioside-induced differentiation-associated protein 2
Location	chr04: 27406244 .. 27408228 (-)
Sequence length	651
RNA-Seq Expression	IVF0000494.1
Synteny	IVF0000494.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGCACCCCTAACGATTTCTCAGTCGTTATTCTCCCTTCTGATGGCGGCATCGATTCCCGCCCACTTTTGTCTGACAAAGATAAAGAGCCTGAAGACGCTGATCATTGGCACGATTGTTCTCAAAACCTTTCCTCCGATGAGGATTTCTCCGATCTCGATCTTTTGCAGTTTGTTCGTCTTGAGGGCTCCGACAAGGCTGGGAATCGTATCCTCCGTGTCGTTGGAAAGTACTTCCCTGGTAAAGAAGCTAATTGAAGAATTATGCTCTCATTCATAATTAGTTCTTCTATACGTTTACGTTACACTCTTTTGCTTCACTACTCGGTTTATAATTCAGCATAATTATTTGGTCCTGGTCTAGACTGTCTATCATTGATTGAGATGAAATTTTATTTTATTTTAATGTGTTCATAATTGCTACTTCATTATGAATTCCTTCTTGGCAAACCTTCCAGATGATAATTTTAATGTTCTTACAAGCTCTATTAGAGAACTTAATTTCTAGTTATCCAATAAATCAGCTTCGTCAACTATTTCTAAATTTGAGACCAAGTGGAAACTGATTTAGAAGTTGGATTATTTAGACCCATTAAATATTCGTGACCAATTTTTAACCAATTTTTTAGTTAATCTCTTCTTACTGTTCTTAGCCTCTATCTTCTGAAGTTATCGATGAACAATTCATGCCCATATCTTCTGTTTTTCATCATCAAAAGTAGATAGGTCTAATGGTTGTAGCACAAAACTTCTGTTTAGAAATATTTAATATTGTTTAATATTTTCTTGTCTAAGAATTCAGATAACTCCAGTTTGTTTTCTAAATATGAAATTTCTTCTAACACAGCTGTTGTTGTAAGTGGAGAGCGGCTGAAGAGATATATCTTCCATAAATTCCAGAACGAATTGTCTGAGGGTCCATTTTGCATTGTGTACTTTCATACTACTGCCCAGAAGGATGATAATTGTCCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAATTTCTCTACTTTGTACATCCTGGTCTCCGTTCGAGGCTTGTCTTGGCGACTTTTGGCCGTTTTTTCCTAAGTGGCGGGTGAGTGTGTTCGCTATACTGGTTTCCAAATGTAACTATCAGGTTGAATTTGTTGACATTTTCTTGGTTTCCTTAATTAAATTATGTTCTGACGTTTTTGAACTGTTTATTTATAACTTTCACTTCTTGGTTGATGGATATGATTCATCTTCTTACAAGTGCTTCAGTAAGACATTAGTTTTCTTCTTTTGGATTTCATAAACTTTGAATATTTTACTATTGCTTTTGCAATCTATTATCATTTTCTTTTGTTGCAGGAATTTTCATAGATTTTTAGTTAACATGTTTACAATCTCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTACATTATTGATGTATTATTTGAGGAATGAAAAGGGAAGAAACAGAAAACCGTTCTTCTTTGTAGGGATGCGTGCGACACTGTATCCCTGAGAAATTATTAGTTTTTGAAAAGTTTTCTTCCTCCCAATTCTTAAAAGCAGCCTACTAGAATATGTAAGCTTTAGCAGTGGGAAGAACCAATTGTACGACTGATTATGGTTGTCTACATCCTTGAAATTTTGTGCTATCTGTTTCCTCTAATGTATGTCTTTAGTAATTGATGGTTCACATTTGTTTGACAAGATTTTTTCTCTTTTGGTAGATTGTACTGGAAAATCAAGTATGTGAGCCGCCTTCAGTATCTTTCGGAAGATATAAAAAAGGGAGAGGTTGAGATTCCCGACTTTGTGAAAGTCACGATGAAGTTCTTGAACACAGACCACTGACAGATTATGGCATTGAACCCGATTCCCTCAATGTCACGGAGGTACCTTATTCTGCCAACTCCGTTTGGAGATATGAGGAGAGATGGATGTCAAGGCAGTACATGACATAG

mRNA sequence

ATGGGTAGCACCCCTAACGATTTCTCAGTCGTTATTCTCCCTTCTGATGGCGGCATCGATTCCCGCCCACTTTTGTCTGACAAAGATAAAGAGCCTGAAGACGCTGATCATTGGCACGATTGTTCTCAAAACCTTTCCTCCGATGAGGATTTCTCCGATCTCGATCTTTTGCAGTTTGTTCGTCTTGAGGGCTCCGACAAGGCTGGGAATCGTATCCTCCGTGTCGTTGGAAAGTACTTCCCTGCTGTTGTTGTAAGTGGAGAGCGGCTGAAGAGATATATCTTCCATAAATTCCAGAACGAATTGTCTGAGGGTCCATTTTGCATTGTGTACTTTCATACTACTGCCCAGAAGGATGATAATTGTCCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAATTTCTCTACTTTGTACATCCTGGTCTCCGTTCGAGGCTTGTCTTGGCGACTTTTGGCCGTTTTTTCCTAAGTGGCGGTCACGATGAAGTTCTTGAACACAGACCACTGACAGATTATGGCATTGAACCCGATTCCCTCAATGTCACGGAGGTACCTTATTCTGCCAACTCCGTTTGGAGATATGAGGAGAGATGGATGTCAAGGCAGTACATGACATAG

Coding sequence (CDS)

ATGGGTAGCACCCCTAACGATTTCTCAGTCGTTATTCTCCCTTCTGATGGCGGCATCGATTCCCGCCCACTTTTGTCTGACAAAGATAAAGAGCCTGAAGACGCTGATCATTGGCACGATTGTTCTCAAAACCTTTCCTCCGATGAGGATTTCTCCGATCTCGATCTTTTGCAGTTTGTTCGTCTTGAGGGCTCCGACAAGGCTGGGAATCGTATCCTCCGTGTCGTTGGAAAGTACTTCCCTGCTGTTGTTGTAAGTGGAGAGCGGCTGAAGAGATATATCTTCCATAAATTCCAGAACGAATTGTCTGAGGGTCCATTTTGCATTGTGTACTTTCATACTACTGCCCAGAAGGATGATAATTGTCCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAATTTCTCTACTTTGTACATCCTGGTCTCCGTTCGAGGCTTGTCTTGGCGACTTTTGGCCGTTTTTTCCTAAGTGGCGGTCACGATGAAGTTCTTGAACACAGACCACTGACAGATTATGGCATTGAACCCGATTCCCTCAATGTCACGGAGGTACCTTATTCTGCCAACTCCGTTTGGAGATATGAGGAGAGATGGATGTCAAGGCAGTACATGACATAG

Protein sequence

MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGGHDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERWMSRQYMT

Homology

[Close]

BLAST of IVF0000494.1 vs. ExPASy Swiss-Prot
Match: Q5CZL1 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis OX=8364 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-12
Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 49  EDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFC 108
           ED SD+  L+ +   G D  G  ++ VVG+  P +++  E+   Y  H   + ++   + 
Sbjct: 328 EDLSDIAALKALYQSGVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVAAKEYV 387

Query: 109 IVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLS 168
           +VYFHT    + N P    L+ +Y+ +   YK  L+ LYFVHP  RS++    F  F +S
Sbjct: 388 LVYFHTLT-GEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTTFTVS 447

Query: 169 GGHDEV 175
           G  D+V
Sbjct: 448 GLKDKV 451

[Close]

BLAST of IVF0000494.1 vs. ExPASy Swiss-Prot
Match: Q5XGM5 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11
Identity = 39/126 (30.95%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 49  EDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFC 108
           ED SD+  L+ +   G D  G  ++ VVG+  P +++  E+   Y  H   + ++   + 
Sbjct: 328 EDLSDIAALKALYQSGVDNCGRSVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVTAKDYV 387

Query: 109 IVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLS 168
           +VYFHT   + ++      L+ +Y+ +   YK  L+ LYFVHP  RS++    F  F +S
Sbjct: 388 LVYFHTLTGEHNHLDS-DFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFFTTFTVS 447

Query: 169 GGHDEV 175
           G  D+V
Sbjct: 448 GLKDKV 451

[Close]

BLAST of IVF0000494.1 vs. ExPASy Swiss-Prot
Match: Q9DBL2 (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=10090 GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 38/126 (30.16%), Postives = 64/126 (50.79%), Query Frame = 0


Query: 49  EDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFC 108
           ED SD+  L+ +   G D  G  ++ VVG+  P  ++  ++   Y  H   + ++   + 
Sbjct: 330 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYV 389

Query: 109 IVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLS 168
           +VYFHT    D N      L+ +Y+ +   YK  L+ +YFVHP  RS++    F  F +S
Sbjct: 390 LVYFHTLT-SDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS 449

Query: 169 GGHDEV 175
           G  D++
Sbjct: 450 GLKDKI 453

[Close]

BLAST of IVF0000494.1 vs. ExPASy Swiss-Prot
Match: Q2KIX2 (Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus OX=9913 GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 36/126 (28.57%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 49  EDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFC 108
           ED SD+  L+ +   G D  G  ++ VVG+  P  ++  ++   Y  H   + ++   + 
Sbjct: 329 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYV 388

Query: 109 IVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLS 168
           +VYFHT   + ++      L+ +Y+ +   YK  L+ +YFVHP  RS++    F  F +S
Sbjct: 389 LVYFHTLTSEYNHLDS-DFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS 448

Query: 169 GGHDEV 175
           G  D++
Sbjct: 449 GLKDKI 452

[Close]

BLAST of IVF0000494.1 vs. ExPASy Swiss-Prot
Match: Q66HX8 (Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio OX=7955 GN=gdap2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 49  EDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFC 108
           ED SD+  L+ +   G D  G  ++ VVG+  P +++  E+   Y  H   + ++   + 
Sbjct: 338 EDLSDIAALKALYQTGVDLCGRTVMVVVGRNIPVMLIDMEKALLYFIH-VMDHITVKEYV 397

Query: 109 IVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLS 168
           +VYFHT    + N      L+ +Y+ + + +K  L+  YFVHP  RS++    F  F +S
Sbjct: 398 MVYFHTLT-GEHNHLDTDFLKKLYDIVDAKFKKNLRAFYFVHPTFRSKVSTWFFTTFSVS 457

Query: 169 GGHDEV 175
           G  D+V
Sbjct: 458 GLKDKV 461

[Close]

BLAST of IVF0000494.1 vs. ExPASy TrEMBL
Match: A0A5D3DPF9 (Rho GTPase-activating protein 68F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006930 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.4e-119
Identity = 216/247 (87.45%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60
           MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV
Sbjct: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60

Query: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120
           RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD
Sbjct: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120

Query: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG---------- 180
           NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG          
Sbjct: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGGLYWKIKYVSR 180

Query: 181 ---------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 217
                                HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW
Sbjct: 181 LQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 240

[Close]

BLAST of IVF0000494.1 vs. ExPASy TrEMBL
Match: A0A1S3B7Q3 (rho GTPase-activating protein 68F OS=Cucumis melo OX=3656 GN=LOC103486907 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.4e-119
Identity = 216/247 (87.45%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60
           MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV
Sbjct: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60

Query: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120
           RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD
Sbjct: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120

Query: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG---------- 180
           NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG          
Sbjct: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGGLYWKIKYVSR 180

Query: 181 ---------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 217
                                HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW
Sbjct: 181 LQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 240

[Close]

BLAST of IVF0000494.1 vs. ExPASy TrEMBL
Match: A0A0A0LEY6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822210 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.7e-115
Identity = 209/247 (84.62%), Postives = 212/247 (85.83%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60
           MGSTPNDFSVVILPSDGGIDSRPLL DKDKE EDADHWHDCSQNLSSDEDFSDLDLLQFV
Sbjct: 1   MGSTPNDFSVVILPSDGGIDSRPLLPDKDKESEDADHWHDCSQNLSSDEDFSDLDLLQFV 60

Query: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120
           RLEG+DK GNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD
Sbjct: 61  RLEGTDKTGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120

Query: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG---------- 180
           NC GLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG          
Sbjct: 121 NCSGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGGLYWKIKYLSR 180

Query: 181 ---------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 217
                                HD+VLEHRPLTDYGIEPDSLNVTEVP+SANSVWRYEERW
Sbjct: 181 LQYLSEDIKKGEVEIPDFVKSHDDVLEHRPLTDYGIEPDSLNVTEVPFSANSVWRYEERW 240

[Close]

BLAST of IVF0000494.1 vs. ExPASy TrEMBL
Match: A0A6J1DW55 (ganglioside-induced differentiation-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111025008 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.2e-104
Identity = 191/248 (77.02%), Postives = 203/248 (81.85%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKE-PEDADHWHDCSQNLSSDEDFSDLDLLQF 60
           MGSTPNDFSV+ILPSDGG+DSRP LSDKDK+  EDA++WHDCSQNLSSDEDFSDLDLLQF
Sbjct: 1   MGSTPNDFSVIILPSDGGVDSRPFLSDKDKDRTEDAENWHDCSQNLSSDEDFSDLDLLQF 60

Query: 61  VRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKD 120
           VRLEGSDK+GNRI RV+GKYFPAVVVSGERLK+YI HKF NEL+EGPFC+VYFHT+ QKD
Sbjct: 61  VRLEGSDKSGNRIFRVIGKYFPAVVVSGERLKKYILHKFHNELAEGPFCVVYFHTSTQKD 120

Query: 121 DNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG--------- 180
           DNCPGLTILRWIYEELPSDYKDRL+ LYFVHPGLRSRLVLAT GRFFLSGG         
Sbjct: 121 DNCPGLTILRWIYEELPSDYKDRLKVLYFVHPGLRSRLVLATLGRFFLSGGLYWKVKYVS 180

Query: 181 ----------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEER 217
                                 HDEVLEHRPLTDYGIEPDSLNV EVP SA S  RYEER
Sbjct: 181 RLQYLSEEIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVGEVPSSAYSFGRYEER 240

[Close]

BLAST of IVF0000494.1 vs. ExPASy TrEMBL
Match: A0A6J1F9L3 (ganglioside-induced differentiation-associated protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111442061 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.4e-103
Identity = 193/248 (77.82%), Postives = 203/248 (81.85%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSD--KDKEPEDADHWHDCSQNLSSDEDFSDLDLLQ 60
           MGSTPNDFSV+ILPS+ GIDSRPLL+D  KDKE E+A++WHDC QNLSSDEDFSDLDLLQ
Sbjct: 1   MGSTPNDFSVIILPSECGIDSRPLLADKGKDKESEEAENWHDCVQNLSSDEDFSDLDLLQ 60

Query: 61  FVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQK 120
           FVRLEGSDKAGNRILRVVGKY+PAVVVSGERLK+YI HKFQNELSEGPFC+VYFHTTAQK
Sbjct: 61  FVRLEGSDKAGNRILRVVGKYYPAVVVSGERLKKYILHKFQNELSEGPFCVVYFHTTAQK 120

Query: 121 DDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSG--------- 180
           DDNCPGLTILRWIYEELPSDYKDRLQ LYFVHPGLRSRLVLAT GRFFLSG         
Sbjct: 121 DDNCPGLTILRWIYEELPSDYKDRLQTLYFVHPGLRSRLVLATLGRFFLSGSLYWKIKYV 180

Query: 181 ----------------------GHDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEE 216
                                  HDEVLEHRPLTDYGIEPDSLNVT  PYSA+S  RYEE
Sbjct: 181 SRLQYLSDDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTGAPYSAHSFGRYEE 240

[Close]

BLAST of IVF0000494.1 vs. NCBI nr
Match: XP_008443288.1 (PREDICTED: rho GTPase-activating protein 68F [Cucumis melo] >KAA0053862.1 rho GTPase-activating protein 68F [Cucumis melo var. makuwa] >TYK25541.1 rho GTPase-activating protein 68F [Cucumis melo var. makuwa])

HSP 1 Score: 434 bits (1115), Expect = 7.33e-153
Identity = 216/247 (87.45%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60
           MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV
Sbjct: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60

Query: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120
           RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD
Sbjct: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120

Query: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG---------- 180
           NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG          
Sbjct: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGGLYWKIKYVSR 180

Query: 181 ---------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 216
                                HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW
Sbjct: 181 LQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 240

[Close]

BLAST of IVF0000494.1 vs. NCBI nr
Match: XP_004136651.3 (rho GTPase-activating protein 68F [Cucumis sativus] >KGN59625.2 hypothetical protein Csa_001773 [Cucumis sativus])

HSP 1 Score: 423 bits (1088), Expect = 9.56e-149
Identity = 210/247 (85.02%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60
           MGSTPNDFSVVILPSDGGIDSRPLL DKDKE EDADHWHDCSQNLSSDEDFSDLDLLQFV
Sbjct: 1   MGSTPNDFSVVILPSDGGIDSRPLLPDKDKESEDADHWHDCSQNLSSDEDFSDLDLLQFV 60

Query: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120
           RLEG+DK GNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD
Sbjct: 61  RLEGTDKTGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120

Query: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG---------- 180
           NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG          
Sbjct: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGGLYWKIKYLSR 180

Query: 181 ---------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 216
                                HD+VLEHRPLTDYGIEPDSLNVTEVP+SANSVWRYEERW
Sbjct: 181 LQYLSEDIKKGEVEIPDFVKSHDDVLEHRPLTDYGIEPDSLNVTEVPFSANSVWRYEERW 240

[Close]

BLAST of IVF0000494.1 vs. NCBI nr
Match: XP_038905531.1 (ganglioside-induced differentiation-associated protein 2 [Benincasa hispida])

HSP 1 Score: 399 bits (1025), Expect = 3.82e-139
Identity = 200/247 (80.97%), Postives = 205/247 (83.00%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFV 60
           MGSTPNDFSVVILPSDGGID R LL DKD+E E+AD+WHDC+QNL SDEDFSDLDLLQFV
Sbjct: 1   MGSTPNDFSVVILPSDGGIDPRQLLPDKDRESEEADNWHDCAQNLPSDEDFSDLDLLQFV 60

Query: 61  RLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDD 120
           RLEGSDK GNRILRVVGKYFPAVVVSGERLK+YIFHKFQNELSEGPFCIVYFHTTAQKDD
Sbjct: 61  RLEGSDKTGNRILRVVGKYFPAVVVSGERLKKYIFHKFQNELSEGPFCIVYFHTTAQKDD 120

Query: 121 NCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG---------- 180
           NCPGLTILRWIYEELPSDYKDRLQ LYFVHPGLRSRLVLATFGRFFLSGG          
Sbjct: 121 NCPGLTILRWIYEELPSDYKDRLQVLYFVHPGLRSRLVLATFGRFFLSGGLYWKIKYVSR 180

Query: 181 ---------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERW 216
                                HDEVLEHRPLTDYGIEPDSLNVTE PY ANS  RYEERW
Sbjct: 181 LQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEAPYLANSFGRYEERW 240

[Close]

BLAST of IVF0000494.1 vs. NCBI nr
Match: XP_022158545.1 (ganglioside-induced differentiation-associated protein 2 [Momordica charantia])

HSP 1 Score: 382 bits (982), Expect = 1.41e-132
Identity = 191/248 (77.02%), Postives = 203/248 (81.85%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDKDKE-PEDADHWHDCSQNLSSDEDFSDLDLLQF 60
           MGSTPNDFSV+ILPSDGG+DSRP LSDKDK+  EDA++WHDCSQNLSSDEDFSDLDLLQF
Sbjct: 1   MGSTPNDFSVIILPSDGGVDSRPFLSDKDKDRTEDAENWHDCSQNLSSDEDFSDLDLLQF 60

Query: 61  VRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKD 120
           VRLEGSDK+GNRI RV+GKYFPAVVVSGERLK+YI HKF NEL+EGPFC+VYFHT+ QKD
Sbjct: 61  VRLEGSDKSGNRIFRVIGKYFPAVVVSGERLKKYILHKFHNELAEGPFCVVYFHTSTQKD 120

Query: 121 DNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG--------- 180
           DNCPGLTILRWIYEELPSDYKDRL+ LYFVHPGLRSRLVLAT GRFFLSGG         
Sbjct: 121 DNCPGLTILRWIYEELPSDYKDRLKVLYFVHPGLRSRLVLATLGRFFLSGGLYWKVKYVS 180

Query: 181 ----------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEER 216
                                 HDEVLEHRPLTDYGIEPDSLNV EVP SA S  RYEER
Sbjct: 181 RLQYLSEEIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVGEVPSSAYSFGRYEER 240

[Close]

BLAST of IVF0000494.1 vs. NCBI nr
Match: XP_022935085.1 (ganglioside-induced differentiation-associated protein 2 [Cucurbita moschata] >XP_023527462.1 ganglioside-induced differentiation-associated protein 2 [Cucurbita pepo subsp. pepo] >KAG6580896.1 hypothetical protein SDJN03_20898, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017652.1 hypothetical protein SDJN02_19518, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381 bits (978), Expect = 5.93e-132
Identity = 193/248 (77.82%), Postives = 203/248 (81.85%), Query Frame = 0


Query: 1   MGSTPNDFSVVILPSDGGIDSRPLLSDK--DKEPEDADHWHDCSQNLSSDEDFSDLDLLQ 60
           MGSTPNDFSV+ILPS+ GIDSRPLL+DK  DKE E+A++WHDC QNLSSDEDFSDLDLLQ
Sbjct: 1   MGSTPNDFSVIILPSECGIDSRPLLADKGKDKESEEAENWHDCVQNLSSDEDFSDLDLLQ 60

Query: 61  FVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQK 120
           FVRLEGSDKAGNRILRVVGKY+PAVVVSGERLK+YI HKFQNELSEGPFC+VYFHTTAQK
Sbjct: 61  FVRLEGSDKAGNRILRVVGKYYPAVVVSGERLKKYILHKFQNELSEGPFCVVYFHTTAQK 120

Query: 121 DDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG-------- 180
           DDNCPGLTILRWIYEELPSDYKDRLQ LYFVHPGLRSRLVLAT GRFFLSG         
Sbjct: 121 DDNCPGLTILRWIYEELPSDYKDRLQTLYFVHPGLRSRLVLATLGRFFLSGSLYWKIKYV 180

Query: 181 -----------------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEE 215
                                  HDEVLEHRPLTDYGIEPDSLNVT  PYSA+S  RYEE
Sbjct: 181 SRLQYLSDDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTGAPYSAHSFGRYEE 240

[Close]

BLAST of IVF0000494.1 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 271.9 bits (694), Expect = 4.3e-73
Identity = 137/236 (58.05%), Postives = 163/236 (69.07%), Query Frame = 0


Query: 7   DFSVVILPSDGGIDSRPLLSDKDKEPEDADHWHDCSQNLSSDEDFSDLDLLQFVRLEGSD 66
           DFSVV+L SD GID+RP L+  D + ++ ++WHDC Q L  DEDFSDLDLLQF  L+G D
Sbjct: 4   DFSVVVLASDLGIDARPFLTRSD-DVDEQENWHDCPQYL-GDEDFSDLDLLQFFTLQGLD 63

Query: 67  KAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPFCIVYFHTTAQKDDNCPGLT 126
           ++GNRI R+VGKYFPA VVS ERLK+YI  K  N+  EGP C+VY H+T QKDDN PG+T
Sbjct: 64  RSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMHSTVQKDDNSPGIT 123

Query: 127 ILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFLSGG---------------- 186
           ILRWIYE+LPSD KDRLQ +YF+HPGLRSRLV+AT GR  LSGG                
Sbjct: 124 ILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYWKIKYVSRLQYLWE 183

Query: 187 ---------------HDEVLEHRPLTDYGIEPDSLNVTEVPYSANSVWRYEERWMS 212
                          HD VLEHRPLTDYGIEPD   ++EV  S+ S+ RYE RW+S
Sbjct: 184 DIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQSSSFSLNRYENRWVS 237

[Close]

BLAST of IVF0000494.1 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-31
Identity = 73/201 (36.32%), Postives = 106/201 (52.74%), Query Frame = 0


Query: 42  SQNLSSDEDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNE 101
           S  +S  E    ++ L+  ++ G DK G +ILR++GK+FPA  +S + LK+Y+  K    
Sbjct: 2   SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPR 61

Query: 102 LSEGPFCIVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLAT 161
           L   PF ++Y HT  Q+ +N PG++ LR IY+ +P + +D LQ +YF+HPGL+SRL LAT
Sbjct: 62  LGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLAT 121

Query: 162 FGRFFLSGG-------------------------------HDEVLEHRPLTDYGIEPDSL 212
            GRF  SGG                               HD+ LE+RP+ DYG E D  
Sbjct: 122 CGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHA 181

The following BLAST results are available for this feature:

BLAST of IVF0000494.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5CZL1	3.2e-12	32.54	Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis O...	[more]
Q5XGM5	1.6e-11	30.95	Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis OX=83...	[more]
Q9DBL2	1.3e-10	30.16	Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=1009...	[more]
Q2KIX2	2.3e-10	28.57	Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus OX=9913 G...	[more]
Q66HX8	2.3e-10	30.16	Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio OX=7955 ...	[more]

BLAST of IVF0000494.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPF9	2.4e-119	87.45	Rho GTPase-activating protein 68F OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B7Q3	2.4e-119	87.45	rho GTPase-activating protein 68F OS=Cucumis melo OX=3656 GN=LOC103486907 PE=4 S...	[more]
A0A0A0LEY6	2.7e-115	84.62	CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822210 P...	[more]
A0A6J1DW55	6.2e-104	77.02	ganglioside-induced differentiation-associated protein 2 OS=Momordica charantia ...	[more]
A0A6J1F9L3	2.4e-103	77.82	ganglioside-induced differentiation-associated protein 2 OS=Cucurbita moschata O...	[more]

BLAST of IVF0000494.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443288.1	7.33e-153	87.45	PREDICTED: rho GTPase-activating protein 68F [Cucumis melo] >KAA0053862.1 rho GT...	[more]
XP_004136651.3	9.56e-149	85.02	rho GTPase-activating protein 68F [Cucumis sativus] >KGN59625.2 hypothetical pro...	[more]
XP_038905531.1	3.82e-139	80.97	ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]	[more]
XP_022158545.1	1.41e-132	77.02	ganglioside-induced differentiation-associated protein 2 [Momordica charantia]	[more]
XP_022935085.1	5.93e-132	77.82	ganglioside-induced differentiation-associated protein 2 [Cucurbita moschata] >X...	[more]

BLAST of IVF0000494.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10210.1	4.3e-73	58.05	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT4G35750.1	1.8e-31	36.32	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	SMART	SM00516	sec14_4	coord: 53..199 e-value: 0.0076 score: 25.1
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 69..177 e-value: 9.8E-18 score: 64.7
IPR001251	CRAL-TRIO lipid binding domain	CDD	cd00170	SEC14	coord: 48..168 e-value: 4.36039E-10 score: 54.3134
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 48..177 e-value: 2.7E-20 score: 74.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..39
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 171..215
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 3..170
None	No IPR available	PANTHER	PTHR11106:SF98	OS01G0948300 PROTEIN	coord: 3..170
None	No IPR available	PANTHER	PTHR11106:SF98	OS01G0948300 PROTEIN	coord: 171..215

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0000494	IVF0000494	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000494.1-exon	IVF0000494.1-exon-chr04:27406244..27406385	exon
IVF0000494.1-exon	IVF0000494.1-exon-chr04:27407114..27407378	exon
IVF0000494.1-exon	IVF0000494.1-exon-chr04:27407985..27408228	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000494.1-cds	IVF0000494.1-cds-chr04:27406244..27406385	CDS
IVF0000494.1-cds	IVF0000494.1-cds-chr04:27407114..27407378	CDS
IVF0000494.1-cds	IVF0000494.1-cds-chr04:27407985..27408228	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0000494.1	IVF0000494.1-protein	polypeptide