HG10023234.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023234.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ethylene-responsive transcription factor
Location	Chr05: 32420587 .. 32421144 (-)
Sequence length	558
RNA-Seq Expression	HG10023234.1
Synteny	HG10023234.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCACACTCACCCAATTCCATCTCTCTACAACGCCTTCTTCGAAACCCATTTCCCCCACTCTCCTCCGCCGGAATCCCAACTCGACGGAATCGCCGCCGTCGTCGGCCGGAAAGTTCTCTTCGGCGACAATTTCCCCACACCCAGCAAGCCATCAAAGTCGGCAACGGTGGCGACGGGGCAAAAGAGTTACAGAGGAGTCCGGAAGCGGCCGTGGGGGAGATGGTCGGCGGAGATTCGCGACCGAATAGGGCGGTGCCGGCATTGGCTTGGAACGTTCGATACCGCAGAAGAGGCGGCGCGTGCGTATGACGCGGCGGCAAGGCGGTTGAGAGGATCGAAAGCTAGAACGAATTTTGAAATGCCGTTGGTGGTCCCGGTGGAATCCACGTCATCGTCGTCCACGTCATCAATGGAAGCGAAAAAAAATCGTAATAAGTTGAAGAAAAATGGGCGGAAATGTTCGGTGGTTACGTCAGTGGCGCATTTGTTCAGTCCTGGAGTGGAGCTTGATTTAAAATTAGGATCAGTTAAGAACTTAATCACTTTTAATTAA

mRNA sequence

ATGATTCACACTCACCCAATTCCATCTCTCTACAACGCCTTCTTCGAAACCCATTTCCCCCACTCTCCTCCGCCGGAATCCCAACTCGACGGAATCGCCGCCGTCGTCGGCCGGAAAGTTCTCTTCGGCGACAATTTCCCCACACCCAGCAAGCCATCAAAGTCGGCAACGGTGGCGACGGGGCAAAAGAGTTACAGAGGAGTCCGGAAGCGGCCGTGGGGGAGATGGTCGGCGGAGATTCGCGACCGAATAGGGCGGTGCCGGCATTGGCTTGGAACGTTCGATACCGCAGAAGAGGCGGCGCGTGCGTATGACGCGGCGGCAAGGCGGTTGAGAGGATCGAAAGCTAGAACGAATTTTGAAATGCCGTTGGTGGTCCCGGTGGAATCCACGTCATCGTCGTCCACGTCATCAATGGAAGCGAAAAAAAATCGTAATAAGTTGAAGAAAAATGGGCGGAAATGTTCGGTGGTTACGTCAGTGGCGCATTTGTTCAGTCCTGGAGTGGAGCTTGATTTAAAATTAGGATCAGTTAAGAACTTAATCACTTTTAATTAA

Coding sequence (CDS)

ATGATTCACACTCACCCAATTCCATCTCTCTACAACGCCTTCTTCGAAACCCATTTCCCCCACTCTCCTCCGCCGGAATCCCAACTCGACGGAATCGCCGCCGTCGTCGGCCGGAAAGTTCTCTTCGGCGACAATTTCCCCACACCCAGCAAGCCATCAAAGTCGGCAACGGTGGCGACGGGGCAAAAGAGTTACAGAGGAGTCCGGAAGCGGCCGTGGGGGAGATGGTCGGCGGAGATTCGCGACCGAATAGGGCGGTGCCGGCATTGGCTTGGAACGTTCGATACCGCAGAAGAGGCGGCGCGTGCGTATGACGCGGCGGCAAGGCGGTTGAGAGGATCGAAAGCTAGAACGAATTTTGAAATGCCGTTGGTGGTCCCGGTGGAATCCACGTCATCGTCGTCCACGTCATCAATGGAAGCGAAAAAAAATCGTAATAAGTTGAAGAAAAATGGGCGGAAATGTTCGGTGGTTACGTCAGTGGCGCATTTGTTCAGTCCTGGAGTGGAGCTTGATTTAAAATTAGGATCAGTTAAGAACTTAATCACTTTTAATTAA

Protein sequence

MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKNGRKCSVVTSVAHLFSPGVELDLKLGSVKNLITFN

Homology

[Close]

BLAST of HG10023234.1 vs. NCBI nr
Match: KAA0058723.1 (AP2 domain-containing protein [Cucumis melo var. makuwa] >TYK10531.1 AP2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.5e-81
Identity = 161/189 (85.19%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGD-NFPTPSKPSKSATV- 60
           MI+THPIP LYN FFET FPHSPPPESQLDGIAAVVGR+VLFG+ N PTP+K S S +  
Sbjct: 1   MINTHPIPPLYNTFFETQFPHSPPPESQLDGIAAVVGREVLFGEYNRPTPTKSSSSTSAM 60

Query: 61  --ATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKA 120
              TGQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKA
Sbjct: 61  APTTGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKA 120

Query: 121 RTNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKNGRKCSVVTSVAHLFSPGVELDLKLG 180
           RTNFEMPLVVPVESTS+ STSS+E K+N NKLKKN RKCSVVTS AHLFSPGVELDLKLG
Sbjct: 121 RTNFEMPLVVPVESTSAWSTSSVEVKRNGNKLKKNERKCSVVTSAAHLFSPGVELDLKLG 180

Query: 181 SVKNLITFN 186
            VKNLITFN
Sbjct: 181 -VKNLITFN 188

[Close]

BLAST of HG10023234.1 vs. NCBI nr
Match: KGN45232.1 (hypothetical protein Csa_016579 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 7.2e-79
Identity = 157/188 (83.51%), Postives = 167/188 (88.83%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATV-- 60
           MI+THPIP LYN F    FPHSPPP+SQLDGIAAVVGR+VLFGDN PTP+K S S +   
Sbjct: 1   MINTHPIPPLYNTF----FPHSPPPDSQLDGIAAVVGRQVLFGDNRPTPTKSSSSTSATA 60

Query: 61  -ATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120
             TGQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR
Sbjct: 61  PTTGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120

Query: 121 TNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKNGRKCSVVTSVAHLFSPGVELDLKLGS 180
           TNFEMPLVVP+ESTS+ STSS+E K+N NKLKKN RKCSVVTS AHLFSPGVELDLKLG 
Sbjct: 121 TNFEMPLVVPMESTSAWSTSSVEVKRNGNKLKKNDRKCSVVTSAAHLFSPGVELDLKLG- 180

Query: 181 VKNLITFN 186
           VKNLITFN
Sbjct: 181 VKNLITFN 183

[Close]

BLAST of HG10023234.1 vs. NCBI nr
Match: KAG6593374.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025723.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.1 bits (684), Expect = 5.7e-68
Identity = 144/183 (78.69%), Postives = 154/183 (84.15%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVAT 60
           MI   PI SLY AFF+T F  SPPP+SQLDGIAAVVGRKVLFGD  P  +  SK+  V T
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGD-IPPSTSGSKTPAV-T 60

Query: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPLVVPVESTSSSSTSSMEAKK---NRNKL----KKNGRKCSVVTSVAHLFSPGVELDL 177
           EMPLVVP+ESTSSSSTSS+E K+   N NKL    K NGRKC+VVT+ AHLFS G+ELDL
Sbjct: 121 EMPLVVPLESTSSSSTSSVEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDL 180

[Close]

BLAST of HG10023234.1 vs. NCBI nr
Match: XP_022960429.1 (ethylene-responsive transcription factor ERF084-like [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 7.5e-68
Identity = 142/183 (77.60%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVAT 60
           MI   PI SLY AFF+T F  SPPP+SQLDGIAAVVGRKVLFGD  P  +  SK+  V T
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGD-IPPSTSGSKTPAV-T 60

Query: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPLVVPVESTSSSSTSSMEAKKNRNK-------LKKNGRKCSVVTSVAHLFSPGVELDL 177
           EMPLVVP+ESTSSSSTSS+E K+N N         K NGRKC+VVT+ AHLFS G+ELDL
Sbjct: 121 EMPLVVPLESTSSSSTSSVEGKRNGNNGNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDL 180

[Close]

BLAST of HG10023234.1 vs. NCBI nr
Match: XP_023514530.1 (ethylene-responsive transcription factor ERF084 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 1.7e-67
Identity = 142/183 (77.60%), Postives = 154/183 (84.15%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVAT 60
           MI   PI SLY AFF+T F  SPPP+SQLDGIAAVVGRKVLFGD  P+ S+ SK+  V T
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSR-SKTPAV-T 60

Query: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPLVVPVESTSSSSTSSMEAKKNRNK-------LKKNGRKCSVVTSVAHLFSPGVELDL 177
           EMPLVVP+ESTSSSSTSS+E K+N N         K +GRKC+VVT+ AHLFS G+ELDL
Sbjct: 121 EMPLVVPLESTSSSSTSSVEGKRNGNNGNKLKAVKKPSGRKCAVVTTAAHLFSRGMELDL 180

[Close]

BLAST of HG10023234.1 vs. ExPASy Swiss-Prot
Match: Q9M8M5 (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana OX=3702 GN=ERF084 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.8e-38
Identity = 97/194 (50.00%), Postives = 112/194 (57.73%), Query Frame = 0


Query: 19  FPHSPPPESQL------DGIAAVVGRKVLFGDNFPTPSKPSKSATVATGQK------SYR 78
           F  +P PE +       D IAAVVG  VLFGD        +K   V  G+K       + 
Sbjct: 58  FSFNPKPEPENTHRVMDDSIAAVVGENVLFGDKNKVSDHLTKEGGVKRGRKMPQKTGGFM 117

Query: 79  GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLVV 138
           GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KA+TNF +P + 
Sbjct: 118 GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPPLF 177

Query: 139 PVESTSSSSTSSMEAKKNRNKLKK-NGRKCSVVTSVAHLFSP------------------ 177
           P E   +   + M  K+ + K KK + RKC  VTSVA LF                    
Sbjct: 178 PKEIAQAQEDNRMRQKQKKKKKKKVSVRKCVKVTSVAQLFDDANFINSSSIKGNVISSID 237

[Close]

BLAST of HG10023234.1 vs. ExPASy Swiss-Prot
Match: Q9SUQ2 (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN=CRF2 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 48  TPSKPSKSATVATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAA 107
           T S    + T  TG+K +RGVR+RPWG+W+AEIRD + R R WLGT++TAEEAA  YD A
Sbjct: 105 TVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNA 164

Query: 108 ARRLRGSKARTNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKN 152
           A +LRG  A TNF +      E  +   +   + KK  NK KK+
Sbjct: 165 AIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKS 208

[Close]

BLAST of HG10023234.1 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 65  YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPL 124
           YRGVRKRPWGR++AEIRD   + R WLGTFDTAEEAA+AYD AAR  RG KA+TNF +  
Sbjct: 27  YRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPL-- 86

Query: 125 VVPVESTSSSSTSSMEA 142
             P E+ S+S +S+ME+
Sbjct: 87  --PSENQSTSHSSTMES 99

[Close]

BLAST of HG10023234.1 vs. ExPASy Swiss-Prot
Match: Q9SAD4 (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana OX=3702 GN=ESR1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18
Identity = 50/110 (45.45%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 17  THFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVATGQKSYRGVRKRPWGRW 76
           T   HSP P              V       +       A   +    YRGVR+RPWGR+
Sbjct: 9   TESTHSPDPNPLTKFFTEPTASPVSRNRKLSSKDTTVTIAGAGSSTTRYRGVRRRPWGRY 68

Query: 77  SAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLVV 127
           +AEIRD + + R WLGTFDTAE+AA AYD+AAR  RG+KARTNF  P  V
Sbjct: 69  AAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAV 118

[Close]

BLAST of HG10023234.1 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-18
Identity = 50/88 (56.82%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 49  PSKPSKSATVATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAA 108
           P+ P+   + A  +  YRGVRKRPWGR++AEIRD + + R WLGTFDTA++AARAYDAAA
Sbjct: 15  PTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAA 74

Query: 109 RRLRGSKARTNFEMPLVVPVESTSSSST 137
           R  RG KA+TNF    V+   S + SST
Sbjct: 75  RDFRGVKAKTNFG---VIVGSSPTQSST 99

[Close]

BLAST of HG10023234.1 vs. ExPASy TrEMBL
Match: A0A5A7US44 (AP2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001820 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 161/189 (85.19%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGD-NFPTPSKPSKSATV- 60
           MI+THPIP LYN FFET FPHSPPPESQLDGIAAVVGR+VLFG+ N PTP+K S S +  
Sbjct: 1   MINTHPIPPLYNTFFETQFPHSPPPESQLDGIAAVVGREVLFGEYNRPTPTKSSSSTSAM 60

Query: 61  --ATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKA 120
              TGQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKA
Sbjct: 61  APTTGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKA 120

Query: 121 RTNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKNGRKCSVVTSVAHLFSPGVELDLKLG 180
           RTNFEMPLVVPVESTS+ STSS+E K+N NKLKKN RKCSVVTS AHLFSPGVELDLKLG
Sbjct: 121 RTNFEMPLVVPVESTSAWSTSSVEVKRNGNKLKKNERKCSVVTSAAHLFSPGVELDLKLG 180

Query: 181 SVKNLITFN 186
            VKNLITFN
Sbjct: 181 -VKNLITFN 188

[Close]

BLAST of HG10023234.1 vs. ExPASy TrEMBL
Match: A0A0A0KA16 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432130 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.5e-79
Identity = 157/188 (83.51%), Postives = 167/188 (88.83%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATV-- 60
           MI+THPIP LYN F    FPHSPPP+SQLDGIAAVVGR+VLFGDN PTP+K S S +   
Sbjct: 1   MINTHPIPPLYNTF----FPHSPPPDSQLDGIAAVVGRQVLFGDNRPTPTKSSSSTSATA 60

Query: 61  -ATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120
             TGQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR
Sbjct: 61  PTTGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120

Query: 121 TNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKNGRKCSVVTSVAHLFSPGVELDLKLGS 180
           TNFEMPLVVP+ESTS+ STSS+E K+N NKLKKN RKCSVVTS AHLFSPGVELDLKLG 
Sbjct: 121 TNFEMPLVVPMESTSAWSTSSVEVKRNGNKLKKNDRKCSVVTSAAHLFSPGVELDLKLG- 180

Query: 181 VKNLITFN 186
           VKNLITFN
Sbjct: 181 VKNLITFN 183

[Close]

BLAST of HG10023234.1 vs. ExPASy TrEMBL
Match: A0A6J1HB06 (ethylene-responsive transcription factor ERF084-like OS=Cucurbita moschata OX=3662 GN=LOC111461162 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.6e-68
Identity = 142/183 (77.60%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVAT 60
           MI   PI SLY AFF+T F  SPPP+SQLDGIAAVVGRKVLFGD  P  +  SK+  V T
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGD-IPPSTSGSKTPAV-T 60

Query: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPLVVPVESTSSSSTSSMEAKKNRNK-------LKKNGRKCSVVTSVAHLFSPGVELDL 177
           EMPLVVP+ESTSSSSTSS+E K+N N         K NGRKC+VVT+ AHLFS G+ELDL
Sbjct: 121 EMPLVVPLESTSSSSTSSVEGKRNGNNGNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDL 180

[Close]

BLAST of HG10023234.1 vs. ExPASy TrEMBL
Match: A0A6J1KXI6 (ethylene-responsive transcription factor ERF084 OS=Cucurbita maxima OX=3661 GN=LOC111498043 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 140/183 (76.50%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVAT 60
           MI   PI SLY AFF+T F  SPPP+SQLDGIAAVVGRKVLFGD    PS     A   T
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGD--IPPSTSGSKAPAVT 60

Query: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPLVVPVESTSSSSTSSMEAKKNRNK-------LKKNGRKCSVVTSVAHLFSPGVELDL 177
           EMPLVVP+ESTSSSSTSS+E K+N N         K +GRKC+VVT+ AHLFS G+ELDL
Sbjct: 121 EMPLVVPLESTSSSSTSSVEGKRNGNNGNKLKAVKKPSGRKCAVVTTAAHLFSRGMELDL 180

[Close]

BLAST of HG10023234.1 vs. ExPASy TrEMBL
Match: A0A6J1GPN9 (ethylene-responsive transcription factor ERF084-like OS=Cucurbita moschata OX=3662 GN=LOC111456328 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60
Identity = 129/173 (74.57%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 1   MIHTHPIPSLYNAFFETHFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVAT 60
           MI+  PIPSL++A            E QLDGIAAVVG KVL GD  P  +   K+A  AT
Sbjct: 1   MINNPPIPSLHDAV----------SEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAAT 60

Query: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPLVVPVESTSSSSTSSMEAKKNRNKLKKNGRKCSVVTSVAHLFSPGVELDL 174
           EMPL+VPVESTSS   SS +  +N NKLKKNGRKCSVVTS AHLFSPG+ELDL
Sbjct: 121 EMPLIVPVESTSSLPISSKQ-NRNGNKLKKNGRKCSVVTSAAHLFSPGLELDL 162

[Close]

BLAST of HG10023234.1 vs. TAIR 10
Match: AT1G80580.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.7e-39
Identity = 97/194 (50.00%), Postives = 112/194 (57.73%), Query Frame = 0


Query: 19  FPHSPPPESQL------DGIAAVVGRKVLFGDNFPTPSKPSKSATVATGQK------SYR 78
           F  +P PE +       D IAAVVG  VLFGD        +K   V  G+K       + 
Sbjct: 58  FSFNPKPEPENTHRVMDDSIAAVVGENVLFGDKNKVSDHLTKEGGVKRGRKMPQKTGGFM 117

Query: 79  GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLVV 138
           GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KA+TNF +P + 
Sbjct: 118 GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPPLF 177

Query: 139 PVESTSSSSTSSMEAKKNRNKLKK-NGRKCSVVTSVAHLFSP------------------ 177
           P E   +   + M  K+ + K KK + RKC  VTSVA LF                    
Sbjct: 178 PKEIAQAQEDNRMRQKQKKKKKKKVSVRKCVKVTSVAQLFDDANFINSSSIKGNVISSID 237

[Close]

BLAST of HG10023234.1 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 )

HSP 1 Score: 94.7 bits (234), Expect = 8.1e-20
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 48  TPSKPSKSATVATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAA 107
           T S    + T  TG+K +RGVR+RPWG+W+AEIRD + R R WLGT++TAEEAA  YD A
Sbjct: 105 TVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNA 164

Query: 108 ARRLRGSKARTNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKN 152
           A +LRG  A TNF +      E  +   +   + KK  NK KK+
Sbjct: 165 AIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKS 208

[Close]

BLAST of HG10023234.1 vs. TAIR 10
Match: AT4G23750.2 (cytokinin response factor 2 )

HSP 1 Score: 94.7 bits (234), Expect = 8.1e-20
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 48  TPSKPSKSATVATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAA 107
           T S    + T  TG+K +RGVR+RPWG+W+AEIRD + R R WLGT++TAEEAA  YD A
Sbjct: 105 TVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNA 164

Query: 108 ARRLRGSKARTNFEMPLVVPVESTSSSSTSSMEAKKNRNKLKKN 152
           A +LRG  A TNF +      E  +   +   + KK  NK KK+
Sbjct: 165 AIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKS 208

[Close]

BLAST of HG10023234.1 vs. TAIR 10
Match: AT1G12980.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 50/110 (45.45%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 17  THFPHSPPPESQLDGIAAVVGRKVLFGDNFPTPSKPSKSATVATGQKSYRGVRKRPWGRW 76
           T   HSP P              V       +       A   +    YRGVR+RPWGR+
Sbjct: 9   TESTHSPDPNPLTKFFTEPTASPVSRNRKLSSKDTTVTIAGAGSSTTRYRGVRRRPWGRY 68

Query: 77  SAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLVV 127
           +AEIRD + + R WLGTFDTAE+AA AYD+AAR  RG+KARTNF  P  V
Sbjct: 69  AAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAV 118

[Close]

BLAST of HG10023234.1 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 50/88 (56.82%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 49  PSKPSKSATVATGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAA 108
           P+ P+   + A  +  YRGVRKRPWGR++AEIRD + + R WLGTFDTA++AARAYDAAA
Sbjct: 15  PTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAA 74

Query: 109 RRLRGSKARTNFEMPLVVPVESTSSSST 137
           R  RG KA+TNF    V+   S + SST
Sbjct: 75  RDFRGVKAKTNFG---VIVGSSPTQSST 99

The following BLAST results are available for this feature:

BLAST of HG10023234.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058723.1	3.5e-81	85.19	AP2 domain-containing protein [Cucumis melo var. makuwa] >TYK10531.1 AP2 domain-...	[more]
KGN45232.1	7.2e-79	83.51	hypothetical protein Csa_016579 [Cucumis sativus]	[more]
KAG6593374.1	5.7e-68	78.69	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022960429.1	7.5e-68	77.60	ethylene-responsive transcription factor ERF084-like [Cucurbita moschata]	[more]
XP_023514530.1	1.7e-67	77.60	ethylene-responsive transcription factor ERF084 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10023234.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8M5	3.8e-38	50.00	Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SUQ2	1.1e-18	48.08	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LW49	1.9e-18	63.64	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q9SAD4	1.9e-18	45.45	Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9MAI5	2.5e-18	56.82	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of HG10023234.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US44	1.7e-81	85.19	AP2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0KA16	3.5e-79	83.51	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432130 PE=...	[more]
A0A6J1HB06	3.6e-68	77.60	ethylene-responsive transcription factor ERF084-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KXI6	1.1e-67	76.50	ethylene-responsive transcription factor ERF084 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GPN9	2.8e-60	74.57	ethylene-responsive transcription factor ERF084-like OS=Cucurbita moschata OX=36...	[more]

BLAST of HG10023234.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80580.1	2.7e-39	50.00	Integrase-type DNA-binding superfamily protein	[more]
AT4G23750.1	8.1e-20	48.08	cytokinin response factor 2	[more]
AT4G23750.2	8.1e-20	48.08	cytokinin response factor 2	[more]
AT1G12980.1	1.4e-19	45.45	Integrase-type DNA-binding superfamily protein	[more]
AT1G53170.1	1.8e-19	56.82	ethylene response factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 65..76 score: 70.15 coord: 87..103 score: 71.23
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 64..127 e-value: 6.3E-33 score: 125.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 64..113 e-value: 1.1E-15 score: 57.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 64..121 score: 22.866192
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 63..121 e-value: 1.55694E-16 score: 68.4523
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 63..122 e-value: 1.1E-26 score: 94.8
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 23..170
None	No IPR available	PANTHER	PTHR31677:SF75	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084	coord: 23..170
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 64..122

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10023234	HG10023234	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10023234.1-cds	HG10023234.1-cds-Chr05:32420587..32421144	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10023234.1	HG10023234.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity