HG10023230.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023230.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	Chr05: 32387913 .. 32388692 (+)
Sequence length	582
RNA-Seq Expression	HG10023230.1
Synteny	HG10023230.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGACCTCAACAGCGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGTAAATTCTTCTTCTTCCTTCATTTCTCTCTTTTATATTGGCTCACACTAATAGAGCTAGAAAGTTTCATAGAGAAAGTATCGTAAAATTTATACGTTAAAAATACAAACTTTAAAACTTGTTATACAATTCTACACATATAATATTCCCTCATTCCTTCTTCACTCTTGCTTAAAAACATTTTGATCATTCTTTCAGGAAGACGAGAATATGGTTAGGGACGTTTGAAACGGCGGAGGATGCAGCACGAGCTTACGACGAGGCAGCACGGTTAATGTGCGGTCCAAAAGCCCGAACCAACTTCCAATACAATCCTAACGATAAACAGTCGTCGTCGTCGTCTTCTTCTTCTTCCAAGCTTCTCTCCGCCGCACTAATAGCGAAATTACATAAATGTCATTTAGCTTCACTCCAAATCGCCAAAAAACACGTCCACAAACAACACCCCGGATTCGAGCCCAACTACACTGCGTACGGCGGTTCACCTCCATCGAGCATTGCTGGAACCACCACTGGCCGATGGACGCCAGAAGATACGTGGGTGTACTCCGACGAAGGTCAAATGGAGATGAATAACAATAATAATAATAACAACATTCATCATCATCAACAATGCCTTCAACCTCTTGAAGATGATCATATTGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

mRNA sequence

ATGGCCCGACCTCAACAGCGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGGACGTTTGAAACGGCGGAGGATGCAGCACGAGCTTACGACGAGGCAGCACGGTTAATGTGCGGTCCAAAAGCCCGAACCAACTTCCAATACAATCCTAACGATAAACAGTCGTCGTCGTCGTCTTCTTCTTCTTCCAAGCTTCTCTCCGCCGCACTAATAGCGAAATTACATAAATGTCATTTAGCTTCACTCCAAATCGCCAAAAAACACGTCCACAAACAACACCCCGGATTCGAGCCCAACTACACTGCGTACGGCGGTTCACCTCCATCGAGCATTGCTGGAACCACCACTGGCCGATGGACGCCAGAAGATACGTGGGTGTACTCCGACGAAGGTCAAATGGAGATGAATAACAATAATAATAATAACAACATTCATCATCATCAACAATGCCTTCAACCTCTTGAAGATGATCATATTGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

Coding sequence (CDS)

ATGGCCCGACCTCAACAGCGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGGACGTTTGAAACGGCGGAGGATGCAGCACGAGCTTACGACGAGGCAGCACGGTTAATGTGCGGTCCAAAAGCCCGAACCAACTTCCAATACAATCCTAACGATAAACAGTCGTCGTCGTCGTCTTCTTCTTCTTCCAAGCTTCTCTCCGCCGCACTAATAGCGAAATTACATAAATGTCATTTAGCTTCACTCCAAATCGCCAAAAAACACGTCCACAAACAACACCCCGGATTCGAGCCCAACTACACTGCGTACGGCGGTTCACCTCCATCGAGCATTGCTGGAACCACCACTGGCCGATGGACGCCAGAAGATACGTGGGTGTACTCCGACGAAGGTCAAATGGAGATGAATAACAATAATAATAATAACAACATTCATCATCATCAACAATGCCTTCAACCTCTTGAAGATGATCATATTGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAYGGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQMIQELLDLGSFEIIT

Homology

[Close]

BLAST of HG10023230.1 vs. NCBI nr
Match: XP_008461170.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 338.6 bits (867), Expect = 3.6e-89
Identity = 174/202 (86.14%), Postives = 183/202 (90.59%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSS--SSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYT 120
           TNF YN ND+QSSS  SSSSSSKLLSAALI KLHKCHLASLQIAK+HVHKQHPGFEP+Y 
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 121 AYGGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIH------HHQQC-LQPL 180
           AYGGSPP SI G TT RWT ++TWVYSD+GQ+EMNNNNNNNN +      HHQQC L+PL
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKGQLEMNNNNNNNNNNNNNNNIHHQQCQLEPL 180

Query: 181 EDDHIEQMIQELLDLGSFEIIT 194
           EDDHIEQMIQELLDLGSFEIIT
Sbjct: 181 EDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of HG10023230.1 vs. NCBI nr
Match: XP_011659507.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN45227.1 hypothetical protein Csa_015978 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86
Identity = 168/196 (85.71%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNF YNPND+QSSSS SSSSKLLSAALI KLHKCHLASLQIAK+HVHKQH GFEP+Y AY
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEG-QMEMNNNNN--NNNIHHHQQCLQPLEDDHIE 180
            GSPP  I G TT +W  ++TWVYS++G QMEMNNNNN  NNNIHH Q  L+PLEDDHIE
Sbjct: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180

Query: 181 QMIQELLDLGSFEIIT 194
           QMIQELLDLGSFEIIT
Sbjct: 181 QMIQELLDLGSFEIIT 196

[Close]

BLAST of HG10023230.1 vs. NCBI nr
Match: XP_038899890.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 323.9 bits (829), Expect = 9.2e-85
Identity = 170/195 (87.18%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHP-GFEPNYTA 120
           TNFQYNPND+ SSSSSS+   LLSAALIAKLHKCHLASLQIAKKH+HKQHP GF+P    
Sbjct: 61  TNFQYNPNDQHSSSSSSN---LLSAALIAKLHKCHLASLQIAKKHIHKQHPAGFQP---- 120

Query: 121 YGGSPPSSIAGTTTG-RWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQ 180
               PP SIAG TTG RWTPE+TWVYSDEGQMEMN+NNNNNNI HHQQCLQPLEDDHIEQ
Sbjct: 121 ----PPPSIAGPTTGRRWTPEETWVYSDEGQMEMNDNNNNNNI-HHQQCLQPLEDDHIEQ 180

Query: 181 MIQELLDLGSFEIIT 194
           MIQELL LGSFEIIT
Sbjct: 181 MIQELLHLGSFEIIT 183

[Close]

BLAST of HG10023230.1 vs. NCBI nr
Match: XP_023547696.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-80
Identity = 164/194 (84.54%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKH-VHKQHPGFEPNYTA 120
           TNFQ+NPND+QSSSSSSSSSKLLSAAL+AKLHKCHLASLQIAKKH  HKQHPGFEPNYT 
Sbjct: 61  TNFQFNPNDQQSSSSSSSSSKLLSAALMAKLHKCHLASLQIAKKHAAHKQHPGFEPNYTV 120

Query: 121 YGGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQM 180
           Y G PP SI+ TTT RW  E+T       Q+E NN+NNN    HHQQCLQPLEDD IEQM
Sbjct: 121 Y-GVPPPSISQTTTDRWRQEET-------QIETNNDNNN---IHHQQCLQPLEDDDIEQM 180

Query: 181 IQELLDLGSFEIIT 194
           IQELLDLGSFEIIT
Sbjct: 181 IQELLDLGSFEIIT 183

[Close]

BLAST of HG10023230.1 vs. NCBI nr
Match: XP_023513557.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-80
Identity = 160/193 (82.90%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNFQ N ND+ S SSSS+   LLS ALIAKLHKCHLASLQIAKKH+HKQHPGF+PN    
Sbjct: 61  TNFQLNLNDQPSFSSSSN---LLSPALIAKLHKCHLASLQIAKKHIHKQHPGFDPN---- 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQMI 180
            G PP SI+ TTTG W PE+TWVYSDE QME+NNN+NN    H QQCLQPLEDDHIEQMI
Sbjct: 121 -GGPPPSISRTTTGPWPPEETWVYSDEAQMEINNNDNN---IHRQQCLQPLEDDHIEQMI 180

Query: 181 QELLDLGSFEIIT 194
           QELLDLG FEIIT
Sbjct: 181 QELLDLGPFEIIT 182

[Close]

BLAST of HG10023230.1 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-47
Identity = 110/191 (57.59%), Postives = 130/191 (68.06%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNF YNPN     +  +SSSKLLSA L AKLHKC++ASLQ+ K+   +       + +A 
Sbjct: 61  TNFPYNPN-----AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSA- 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQMI 180
             S   +   +   R   E T +  ++G   M            QQ  +PLE+DHIEQMI
Sbjct: 121 -DSDGVTANESHLNRGVTETTEIKWEDGNANM------------QQNFRPLEEDHIEQMI 172

Query: 181 QELLDLGSFEI 192
           +ELL  GS E+
Sbjct: 181 EELLHYGSIEL 172

[Close]

BLAST of HG10023230.1 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.9e-39
Identity = 97/182 (53.30%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNF YNPN     +S SSSSKLLSA LIAKLH+C++ASLQ+ +       P   P     
Sbjct: 61  TNFPYNPN-----ASQSSSSKLLSATLIAKLHRCYMASLQMTR-------PSSLPEAPRI 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIH----HHQQCLQPLEDDHI 179
             SP +++ G         D  +   + + E      N +         Q  +PLE+DHI
Sbjct: 121 IASPNNAVKGIGA------DAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHI 164

[Close]

BLAST of HG10023230.1 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-25
Identity = 63/101 (62.38%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQY 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPND------------KQSSSSSSSSSKLLSAALIAKLHKC 95
           N N+              S+ SSS+SS  LS+ L AKL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of HG10023230.1 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF-- 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 -QYNPNDKQSSSSSSSSSKLLSAALIAKLHK 94
           + N ++    +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of HG10023230.1 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-18
Identity = 77/188 (40.96%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQY 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF  
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  NPNDKQSS-----SSSSSSSKLLSAALIAKLHK-CH--LASLQIAKKHVHKQHPGFEPNY 125
             +++ S      +S   S K LS  L AKL K C     SL   +      H G     
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQK- 124

Query: 126 TAYGGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIE 185
            A   + P+ +     G    E      D G   MN  N        ++ +   ED    
Sbjct: 125 RAGSKTSPTWVMRLELGNVVNESA---VDLGLTTMNKQNVEKE-EEEEEAIISDEDQLAM 184

[Close]

BLAST of HG10023230.1 vs. ExPASy TrEMBL
Match: A0A1S3CE50 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103499832 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 174/202 (86.14%), Postives = 183/202 (90.59%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSS--SSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYT 120
           TNF YN ND+QSSS  SSSSSSKLLSAALI KLHKCHLASLQIAK+HVHKQHPGFEP+Y 
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 121 AYGGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIH------HHQQC-LQPL 180
           AYGGSPP SI G TT RWT ++TWVYSD+GQ+EMNNNNNNNN +      HHQQC L+PL
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKGQLEMNNNNNNNNNNNNNNNIHHQQCQLEPL 180

Query: 181 EDDHIEQMIQELLDLGSFEIIT 194
           EDDHIEQMIQELLDLGSFEIIT
Sbjct: 181 EDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of HG10023230.1 vs. ExPASy TrEMBL
Match: A0A0A0KA12 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 168/196 (85.71%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNF YNPND+QSSSS SSSSKLLSAALI KLHKCHLASLQIAK+HVHKQH GFEP+Y AY
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEG-QMEMNNNNN--NNNIHHHQQCLQPLEDDHIE 180
            GSPP  I G TT +W  ++TWVYS++G QMEMNNNNN  NNNIHH Q  L+PLEDDHIE
Sbjct: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180

Query: 181 QMIQELLDLGSFEIIT 194
           QMIQELLDLGSFEIIT
Sbjct: 181 QMIQELLDLGSFEIIT 196

[Close]

BLAST of HG10023230.1 vs. ExPASy TrEMBL
Match: A0A6J1H793 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111460738 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.6e-80
Identity = 159/193 (82.38%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNFQ N ND+ S SSSS+   LLS ALIAKLHKCHLASLQI KKH+HKQHPGF+ N    
Sbjct: 61  TNFQLNLNDQPSFSSSSN---LLSPALIAKLHKCHLASLQITKKHIHKQHPGFDLN---- 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQMI 180
            G PP SI+ TTTG+W PE+TWVYSDE QME+NNN+NNN   HHQ CLQPLEDDHIEQMI
Sbjct: 121 -GGPPPSISRTTTGQWPPEETWVYSDEAQMEINNNDNNN--IHHQPCLQPLEDDHIEQMI 180

Query: 181 QELLDLGSFEIIT 194
           QELLDLG FEIIT
Sbjct: 181 QELLDLGPFEIIT 183

[Close]

BLAST of HG10023230.1 vs. ExPASy TrEMBL
Match: A0A6J1GPQ0 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111456403 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79
Identity = 162/194 (83.51%), Postives = 169/194 (87.11%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKH-VHKQHPGFEPNYTA 120
           TNFQ+NPND+QSSSSSSSSSKLLSA L+AKLHKCHLASLQIAKKH  HKQHPGFEPNY  
Sbjct: 61  TNFQFNPNDQQSSSSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHAAHKQHPGFEPNYAV 120

Query: 121 YGGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQM 180
           YGG P  SI+ TTT RW  E+T       Q+E NN+NNN    HHQQCLQPLEDD IEQM
Sbjct: 121 YGG-PSPSISQTTTHRWRQEET-------QIETNNDNNN---IHHQQCLQPLEDDDIEQM 180

Query: 181 IQELLDLGSFEIIT 194
           IQELLDLGSFEIIT
Sbjct: 181 IQELLDLGSFEIIT 183

[Close]

BLAST of HG10023230.1 vs. ExPASy TrEMBL
Match: A0A6J1KW57 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111497726 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 156/193 (80.83%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQ+YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQQYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNFQ N ND+ S SSSS+   LLS ALIAKLHKCHLASLQIAKKH+HKQHPGF+PN    
Sbjct: 61  TNFQLNLNDQPSFSSSSN---LLSPALIAKLHKCHLASLQIAKKHIHKQHPGFDPN---- 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQMI 180
            G PP SI+ TTTG+W PE+TWVYSDE QM++NNN       HHQ CLQPLEDDHIEQMI
Sbjct: 121 -GGPPPSISRTTTGQWPPEETWVYSDEAQMKINNN------IHHQPCLQPLEDDHIEQMI 179

Query: 181 QELLDLGSFEIIT 194
           QELLDLG FEIIT
Sbjct: 181 QELLDLGPFEIIT 179

[Close]

BLAST of HG10023230.1 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-48
Identity = 110/191 (57.59%), Postives = 130/191 (68.06%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQYNPNDKQSSSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHVHKQHPGFEPNYTAY 120
           TNF YNPN     +  +SSSKLLSA L AKLHKC++ASLQ+ K+   +       + +A 
Sbjct: 61  TNFPYNPN-----AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSA- 120

Query: 121 GGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIEQMI 180
             S   +   +   R   E T +  ++G   M            QQ  +PLE+DHIEQMI
Sbjct: 121 -DSDGVTANESHLNRGVTETTEIKWEDGNANM------------QQNFRPLEEDHIEQMI 172

Query: 181 QELLDLGSFEI 192
           +ELL  GS E+
Sbjct: 181 EELLHYGSIEL 172

[Close]

BLAST of HG10023230.1 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-26
Identity = 63/101 (62.38%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQY 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPND------------KQSSSSSSSSSKLLSAALIAKLHKC 95
           N N+              S+ SSS+SS  LS+ L AKL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of HG10023230.1 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 9.0e-22
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF-- 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 -QYNPNDKQSSSSSSSSSKLLSAALIAKLHK 94
           + N ++    +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of HG10023230.1 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-19
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF-- 65
          +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 -QYNPNDKQSSSSSSSSSKLLSAALIAKLHK 94
           + N ++    +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 92

[Close]

BLAST of HG10023230.1 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-19
Identity = 77/188 (40.96%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQY 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF  
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  NPNDKQSS-----SSSSSSSKLLSAALIAKLHK-CH--LASLQIAKKHVHKQHPGFEPNY 125
             +++ S      +S   S K LS  L AKL K C     SL   +      H G     
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQK- 124

Query: 126 TAYGGSPPSSIAGTTTGRWTPEDTWVYSDEGQMEMNNNNNNNNIHHHQQCLQPLEDDHIE 185
            A   + P+ +     G    E      D G   MN  N        ++ +   ED    
Sbjct: 125 RAGSKTSPTWVMRLELGNVVNESA---VDLGLTTMNKQNVEKE-EEEEEAIISDEDQLAM 184

The following BLAST results are available for this feature:

BLAST of HG10023230.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461170.1	3.6e-89	86.14	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_011659507.1	2.2e-86	85.71	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN45227.1 hy...	[more]
XP_038899890.1	9.2e-85	87.18	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
XP_023547696.1	4.0e-80	84.54	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_023513557.1	4.0e-80	82.90	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of HG10023230.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	2.1e-47	57.59	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	7.9e-39	53.30	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	2.9e-25	62.38	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	1.3e-20	60.44	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	7.7e-18	40.96	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of HG10023230.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CE50	1.7e-89	86.14	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KA12	1.1e-86	85.71	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=...	[more]
A0A6J1H793	5.6e-80	82.38	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1GPQ0	4.7e-79	83.51	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KW57	1.4e-78	80.83	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of HG10023230.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	1.5e-48	57.59	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	2.1e-26	62.38	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	9.0e-22	60.44	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	4.2e-19	58.24	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	5.5e-19	40.96	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 2.3E-41 score: 153.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 8.1E-12 score: 45.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 20.73171
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..66 e-value: 1.88549E-34 score: 114.676
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..65 e-value: 6.0E-26 score: 92.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..135
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..192
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..192
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..65

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10023230	HG10023230	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10023230.1-cds	HG10023230.1-cds-Chr05:32387913..32387995	CDS
HG10023230.1-cds	HG10023230.1-cds-Chr05:32388194..32388692	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10023230.1	HG10023230.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity