HG10020778.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAACGACGTCGTTTAGTTTCGCTAACCATAAAACTTCTTCCAATTTGGAGCGCTTTCTTCAATGCGTCACTCCTTGTGTTCCTTGGCGAACTCTTCCTCGGGTAATTTTCTTCTTCTTCTTACAATTTATTTTTATTGTTTTATTATTCTTTATTCTTCACTACAATTCCTACATTTTCCCCCAATTCCCACCATAATTTTTCATTTATTTATTTCTGCATTTGTCTATCCTAATCCATGTGATGCACGTTTTGGGTAATTTTTATTTTTATTTTTCAATTCTCAACCATCCTCAACTAATTCGAGAATGATCGAACGTAATATCAATTTTGAGGTTAGAGTTAAAATGCCACCGTTTTTCCATCAACATTGTAATTTTCCATTTCCCTACGGTCAGCTCTGTAATATTTTCTTGTTTAAAATGAAAAGTAAAATGATGGAAAGGAGTTGAAAAAAAAGGTATTTTTAATTTTCTCACCATTTCTGAATTTTACAGATATTAAATTGTATTATAATTATTTTGTCCGGAGGGAGAGAGGGAGATAAGTTTTTTTTTTCATAAAAAATGAAAGAGTCTGGAATTATACAAAACGTGGCGGATAGATTTCTAATTTCCTTAAACTTGCTGAGTCACCCTCCCTGTCTTTCCTTGTGAATTTTCTATGGGCCCTTAATGGGCCGATATCTTTACCCTTCTGGGCCCATTAAGACGGTGACTGGTCTTATATTCTCCGCATATACTCGGAATATTCCTCCCTCTTTCTACACTAATTTTTAATTATTTTTTTTCCATTCAACATTGTATAAATTTTTTCTACACTAAAAAATCAATTACAAAACTTATATTTAATATTGAGATGGGCATAAATTGGTCTAGACACTTACGGATATAAAAAAAAAATGGATTTTGTGTTCCTGTCTCGTCTCTTAACCCTAAATATAATGAAATTTTAGAAACTAATTTTTAAAAAAGCACAAATTGTTTTGAAACTAATTGACAGAAATAAGCAAATTTAGTGCTGGGTCGAAGTCGCCCCCACCTTATCTTCAAAATTTCTTATTTTTGTCATTTGCTTAAAAATACAAAAAAAAAAAAGAAAAAAAGTCTTAATTTTGAAATTATATTTTTTGAACTTACCCTACAAAAGAGTGGCCATAAAGCAACGTGCCCAAGAGACGGGGCCCAAATTAAATAGATACGACATATAATATGTTTTCAGATGTCTTATCTTTAGAAGTCTTACCCCCGCGTCACGTGGCATTTTGATTGGCTTAAAGTTCTATTTTTTCTTCTCTATTTTTCCCTTCCATGAATAAAGAGTTTTATAAATTAAATTTCATTCATACTCATCCACAGACGACAGAAGATATAGGTCATCATATGTTGTCGTGATGTGCTTAAAAAAATGTTGTCATGATTTCCTTCTTTTTTTAACTTGTCAAGATATCTGAGCCCAAAATTAAATATTCTACATAATACTTACTTGACTAGTTTTCAGTTGGCTCCACTTGTTTTCTCTGCCCATATTTTATTTCTCTAATCAAGCCTTTTTCTAGGAGGATTGTTGTATAAGATTAAATTTACTGTAATCCATCGAGTTAACTTTTTGGATTTAGTGTTAAGGGAGCGTTTGGGACGTAGAGTTGAGTTGATAATTATTATACTTGGGGAGTAATTGAGGGAGTTGACACGAATAACGAGATAAGAAATATGAGTTAATGCGAATATGAGGTAATAAACCTCTTTAATTATCGGTGAACCAAATGGTAGATGAGTTTTTTTTACCCACCCAACCCAACTCAACTTGGGGGCCAAACACCCTCTAAGCATTTGAACATTTATCATCTTATTTTTTCTTCAATTAATATTGATAACCACTTGTAGAGCCTTGGGCTTATATCTTAGCTCAAAAGGGTGGGGAGCAATATAAAATTAAATTTACCACTATATCCTCTTGTAAGATTTTGAGTTTAGTTGTGGTTTAATAAAGTTAATTGAAGTGAATATCATCACAAGAGTGAGAATTTAAAAGCGATTTGTTGTTTTATTAAGTTCTAACTAGTAAAAATTCTCACTTCACGCATCATTTTGTTGTACTTAAAGGAGGCGTTTGGGGGCTAAGTTGATTATTATAGTCTGTGGGTTAAAATAGTATGTGTTTGGGGTGTAGAAGATCTTCTGTGCAGCAGTTAGAGTAGAGTTTGCCTCTTGGAAAAGGGAAATCATGATTTGCTCCATTTTGTTTCCATCTATGGCAGCCAGATTGATCTTCTTTTGTTCAGACTGCAGTCATTCAAAATGGGATTGACTGACTTTTGATATTTCTTGCTCATGTATTTTTAATATCATTACATTTCATCCCATTGTTTTTGAAAATGTGATGTGTTTCTATTTTACTTTCTCTGAACCTAACAGCTTTCTTTTCCATATAGAGCTGCCTTCATGATCTCAATAGTCAGTGGCAACAACCTGATAAAGATACCATTCAATACTTCACGCTCGGCGAGCTGTGGGATTACTACAATGAATGGAGTGCATATGGTGCTGGTATCCCAATACAGATCAATGGTTCGGAAACTGCTACGCAGTTCTACGTGCCGTATCTGTCTGCAATTCAGATCTACACAAGCAAGCCTGTTGCACCTTCCAGGTATACTGAAGTGACTTTCATTTCATGTTGCTGCCTTTGAAGTTTGAAAACTCTGTTTCTCTTTGATAAATCCGTTTACTGGAACGGGGCAGGGCACAATACAACTTGGAATATATTTATTCATTAGAATTTAATATAAGAGGGAAGATTAGTATAAGTTTTAAAGGGAATGTTTGATATAGTACTAATTAGTTTTGATTGCATTGTGTTGCACGTAAGCTATATTTGTTCGATTTCTCTTTGTAGAAATCGGAGATATGATAGCGACATGGCAGAATGTGAAAGCGATTCTTGGAGCGATGATAGCTGGAGTGATAACCTGTCAAGATCCCTGAGCAACAACTCTAGCAGGACATGGGATGCGGTTTCTGAAGATTCAAGCTTCGACCAGGAGGGATCATGGCCGCTGAGGGAAAAACTTGGATACCTCTCTTTACAGTATGTGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTTATGGACAAGGTAGATCTTTAGTCTATTGTTTTAAATAGATCTTCATTGTTGATGTTACAAAAGGTATTTCTCATCAAGGATGGTAACTAAACTAATGTTTTCAAATTTTAACAGTTCTATAGTTGTTGATAAGCCTTGGATAAAAGATCTAAAGAAAGTTTTGATATTCATATGAAAAAATTAGGTGGAATTATACATAGAGCATAGAAGAAGTGTAAAATGACATTATCAAAATCTTCTTCTTTGCTTATGTTAGACAATCTCCATTTCAGATAACAGAGCTAACTCAAACCTATCCAGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCTGCTAGTTGGATGGCTGTTTCTTGGTAAAAACCGCCTTCCTCTATTTACCGATATCGTGTTTCCTTTTAGCGATTTTGTTCACTGCTTTCAACTTGATTCAGGTACCCTATTTATCATATCCCTAGTCAGAAAAATGACAAAGACTTCGCGACGTGCTTTCTAACCTATCATACATTATCTTCATCTTTCCAAGGTGTGGGACTGTCTATACTTTTTTCCAGAAATGTAAGGAACCTTTATCTGTCTATAATACTTAAGATCAATGTTTGATTGATGACTGCAGATTGCTCTATGGATCATGAAGGGCAAGATGGATGTCATGCCGAATCCGATACCGGGGGTCAAACCGACGACAAAACTAGTACCTCTACTTCTACTTGCCTTTACCCATTTGGGCTGGCCACTTATAGAATGCAGGGAGATCTGTGGTTGAAGCCAGAGACGTCTGATTACGAACGAATCGTCGATCTCTATCATGCTGCCGATTCATGGTTGAAGCAGCTCGGCGTTCATCATCATGACTTCAACTTCTTTTCCCTTCACTCAACCTTGTAA ATGGCTCAAACGACGTCGTTTAGTTTCGCTAACCATAAAACTTCTTCCAATTTGGAGCGCTTTCTTCAATGCGTCACTCCTTGTGTTCCTTGGCGAACTCTTCCTCGGAGCTGCCTTCATGATCTCAATAGTCAGTGGCAACAACCTGATAAAGATACCATTCAATACTTCACGCTCGGCGAGCTGTGGGATTACTACAATGAATGGAGTGCATATGGTGCTGGTATCCCAATACAGATCAATGGTTCGGAAACTGCTACGCAGTTCTACGTGCCGTATCTGTCTGCAATTCAGATCTACACAAGCAAGCCTGTTGCACCTTCCAGAAATCGGAGATATGATAGCGACATGGCAGAATGTGAAAGCGATTCTTGGAGCGATGATAGCTGGAGTGATAACCTGTCAAGATCCCTGAGCAACAACTCTAGCAGGACATGGGATGCGGTTTCTGAAGATTCAAGCTTCGACCAGGAGGGATCATGGCCGCTGAGGGAAAAACTTGGATACCTCTCTTTACAGTATGTGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTTATGGACAAGATAACAGAGCTAACTCAAACCTATCCAGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCTGCTAGTTGGATGGCTGTTTCTTGGTACCCTATTTATCATATCCCTAGTCAGAAAAATGACAAAGACTTCGCGACGTGCTTTCTAACCTATCATACATTATCTTCATCTTTCCAAGATTGCTCTATGGATCATGAAGGGCAAGATGGATGTCATGCCGAATCCGATACCGGGGGTCAAACCGACGACAAAACTAGTACCTCTACTTCTACTTGCCTTTACCCATTTGGGCTGGCCACTTATAGAATGCAGGGAGATCTGTGGTTGAAGCCAGAGACGTCTGATTACGAACGAATCGTCGATCTCTATCATGCTGCCGATTCATGGTTGAAGCAGCTCGGCGTTCATCATCATGACTTCAACTTCTTTTCCCTTCACTCAACCTTGTAA ATGGCTCAAACGACGTCGTTTAGTTTCGCTAACCATAAAACTTCTTCCAATTTGGAGCGCTTTCTTCAATGCGTCACTCCTTGTGTTCCTTGGCGAACTCTTCCTCGGAGCTGCCTTCATGATCTCAATAGTCAGTGGCAACAACCTGATAAAGATACCATTCAATACTTCACGCTCGGCGAGCTGTGGGATTACTACAATGAATGGAGTGCATATGGTGCTGGTATCCCAATACAGATCAATGGTTCGGAAACTGCTACGCAGTTCTACGTGCCGTATCTGTCTGCAATTCAGATCTACACAAGCAAGCCTGTTGCACCTTCCAGAAATCGGAGATATGATAGCGACATGGCAGAATGTGAAAGCGATTCTTGGAGCGATGATAGCTGGAGTGATAACCTGTCAAGATCCCTGAGCAACAACTCTAGCAGGACATGGGATGCGGTTTCTGAAGATTCAAGCTTCGACCAGGAGGGATCATGGCCGCTGAGGGAAAAACTTGGATACCTCTCTTTACAGTATGTGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTTATGGACAAGATAACAGAGCTAACTCAAACCTATCCAGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCTGCTAGTTGGATGGCTGTTTCTTGGTACCCTATTTATCATATCCCTAGTCAGAAAAATGACAAAGACTTCGCGACGTGCTTTCTAACCTATCATACATTATCTTCATCTTTCCAAGATTGCTCTATGGATCATGAAGGGCAAGATGGATGTCATGCCGAATCCGATACCGGGGGTCAAACCGACGACAAAACTAGTACCTCTACTTCTACTTGCCTTTACCCATTTGGGCTGGCCACTTATAGAATGCAGGGAGATCTGTGGTTGAAGCCAGAGACGTCTGATTACGAACGAATCGTCGATCTCTATCATGCTGCCGATTCATGGTTGAAGCAGCTCGGCGTTCATCATCATGACTTCAACTTCTTTTCCCTTCACTCAACCTTGTAA MAQTTSFSFANHKTSSNLERFLQCVTPCVPWRTLPRSCLHDLNSQWQQPDKDTIQYFTLGELWDYYNEWSAYGAGIPIQINGSETATQFYVPYLSAIQIYTSKPVAPSRNRRYDSDMAECESDSWSDDSWSDNLSRSLSNNSSRTWDAVSEDSSFDQEGSWPLREKLGYLSLQYVEMSSPYWRVPFMDKITELTQTYPALTTLRSVDLSPASWMAVSWYPIYHIPSQKNDKDFATCFLTYHTLSSSFQDCSMDHEGQDGCHAESDTGGQTDDKTSTSTSTCLYPFGLATYRMQGDLWLKPETSDYERIVDLYHAADSWLKQLGVHHHDFNFFSLHSTL Homology
BLAST of HG10020778.1 vs. NCBI nr
Match: XP_038895490.1 (uncharacterized protein LOC120083714 isoform X1 [Benincasa hispida]) HSP 1 Score: 669.8 bits (1727), Expect = 1.2e-188 Identity = 318/339 (93.81%), Postives = 329/339 (97.05%), Query Frame = 0
BLAST of HG10020778.1 vs. NCBI nr
Match: XP_004137643.2 (uncharacterized protein LOC101213420 [Cucumis sativus] >KGN64231.1 hypothetical protein Csa_014014 [Cucumis sativus]) HSP 1 Score: 659.1 bits (1699), Expect = 2.1e-185 Identity = 313/339 (92.33%), Postives = 325/339 (95.87%), Query Frame = 0
BLAST of HG10020778.1 vs. NCBI nr
Match: XP_008437273.1 (PREDICTED: uncharacterized protein LOC103482746 [Cucumis melo] >TYJ99085.1 uncharacterized protein E5676_scaffold248G002890 [Cucumis melo var. makuwa]) HSP 1 Score: 657.9 bits (1696), Expect = 4.7e-185 Identity = 313/339 (92.33%), Postives = 326/339 (96.17%), Query Frame = 0
BLAST of HG10020778.1 vs. NCBI nr
Match: XP_022955129.1 (uncharacterized protein LOC111457189 isoform X1 [Cucurbita moschata]) HSP 1 Score: 640.6 bits (1651), Expect = 7.7e-180 Identity = 306/343 (89.21%), Postives = 321/343 (93.59%), Query Frame = 0
BLAST of HG10020778.1 vs. NCBI nr
Match: KAG6573005.1 (hypothetical protein SDJN03_26892, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 639.8 bits (1649), Expect = 1.3e-179 Identity = 306/345 (88.70%), Postives = 321/345 (93.04%), Query Frame = 0
BLAST of HG10020778.1 vs. ExPASy TrEMBL
Match: A0A0A0LW14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044320 PE=4 SV=1) HSP 1 Score: 659.1 bits (1699), Expect = 1.0e-185 Identity = 313/339 (92.33%), Postives = 325/339 (95.87%), Query Frame = 0
BLAST of HG10020778.1 vs. ExPASy TrEMBL
Match: A0A5D3BL53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002890 PE=4 SV=1) HSP 1 Score: 657.9 bits (1696), Expect = 2.3e-185 Identity = 313/339 (92.33%), Postives = 326/339 (96.17%), Query Frame = 0
BLAST of HG10020778.1 vs. ExPASy TrEMBL
Match: A0A1S3ATR9 (uncharacterized protein LOC103482746 OS=Cucumis melo OX=3656 GN=LOC103482746 PE=4 SV=1) HSP 1 Score: 657.9 bits (1696), Expect = 2.3e-185 Identity = 313/339 (92.33%), Postives = 326/339 (96.17%), Query Frame = 0
BLAST of HG10020778.1 vs. ExPASy TrEMBL
Match: A0A6J1GV34 (uncharacterized protein LOC111457189 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457189 PE=4 SV=1) HSP 1 Score: 640.6 bits (1651), Expect = 3.7e-180 Identity = 306/343 (89.21%), Postives = 321/343 (93.59%), Query Frame = 0
BLAST of HG10020778.1 vs. ExPASy TrEMBL
Match: A0A6J1C632 (uncharacterized protein LOC111008768 OS=Momordica charantia OX=3673 GN=LOC111008768 PE=4 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 2.3e-177 Identity = 303/339 (89.38%), Postives = 317/339 (93.51%), Query Frame = 0
BLAST of HG10020778.1 vs. TAIR 10
Match: AT1G17830.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 327.4 bits (838), Expect = 1.4e-89 Identity = 173/334 (51.80%), Postives = 228/334 (68.26%), Query Frame = 0
BLAST of HG10020778.1 vs. TAIR 10
Match: AT1G73210.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 304.3 bits (778), Expect = 1.2e-82 Identity = 167/323 (51.70%), Postives = 217/323 (67.18%), Query Frame = 0
BLAST of HG10020778.1 vs. TAIR 10
Match: AT4G03420.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 304.3 bits (778), Expect = 1.2e-82 Identity = 160/321 (49.84%), Postives = 207/321 (64.49%), Query Frame = 0
BLAST of HG10020778.1 vs. TAIR 10
Match: AT1G73210.2 (Protein of unknown function (DUF789) ) HSP 1 Score: 302.4 bits (773), Expect = 4.7e-82 Identity = 166/323 (51.39%), Postives = 216/323 (66.87%), Query Frame = 0
BLAST of HG10020778.1 vs. TAIR 10
Match: AT1G03610.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 298.5 bits (763), Expect = 6.7e-81 Identity = 157/317 (49.53%), Postives = 200/317 (63.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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