HG10020399.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020399.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr04: 31519635 .. 31522073 (-)
Sequence length	747
RNA-Seq Expression	HG10020399.1
Synteny	HG10020399.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGCTCAGCGGAATCATCGCCCATCAAATAAAACGAAATCCAATGATATTTCGAAGTTGAATGACTGTGACGGTGGCGGGTAAGAATAGCAAATGAGTGTCTAGGAAATTGGAGGCAAGTACGAGGGCATTTTAGTAAATTTAAGCATCTGGAACCTACCTGCTTCTTCGTGACTATTAAAGCAACTGAGGTGGTTCTGTTACGTGTTCGCTAAGCGAAAGCCAAGTGAGTCCCACTTCCCTTCTCTACGGCTGTTTTTCACTTCTCGAATTGCCGAATTTGCTTCGAAAGCCCTTTGGCGAAGAACTACACACAGAAAGGGGATTTCATAATTTCATATCTTGGATTTCTTTTAGAGGTGCGCCGTTGAAGACGAACGAGGTGTAAGGAATTTTCGCTTGCAGATTGCATAGGTATTTATTTTTGTTGTTTTTGAGTTTCGTTTTTTGTGTTCTTTATGGTTTATTCTGAATTGAATGGAAATTTATCTATTGAATTGAATTAGATGAGGTAGGAGTTGTTGCTGCTGATACTGGAAGTGGTGGATGGGAGTTTCTAAGTGTGGAAATTAAGTCAAAATGCGGAAATCTTTCAAGGATTCCCTCAAGGCACTCGAGGCTGATATTCAGTTCGCCAATACCTTGTAATCTCTTCATATGCGGTTCAACTTTCTTATAATTTGATATTTACTCTGGATTCTGTGAGAATTGCTAATGCAATGTTTGTTTCGTTGTCTGGAAATTATCAGCTATGTTTGTTAGATTTCTATGATCGAAACTGAATCTAGTTTCAATGTTTTGTATCTTATGATCTATGTTTTCTCTATGCTTAGATTAGAATGTCAGTCATGTTGGTTTCGTTGCGTATAGAGTTTGAGGTTCAGGAAAGTTTCTCTGAAAGTAGTTCGATAGGTTATGCTGTCTGAGAGAGCTGCAAGTTTTTAGGTTTTGCATCTCATTACCTGTACATTCTTCCTTTCTTATTAGATTAGATATTAGTCGCTTCGATCTTATTCGTGGAATTGTTCTGCGCCCACTCAAATACGTTGTTTCCTGCTCTAAGATTTATGGAGCTATTTATTTAAGATTTAATAATAACTTTTGTGTTTCTTATTTTATAAATGTTGAGTAATTTGGATATGTATTTTCTTCCTTTTGTGTGGGTTATGTTGTATGCTTAGGTGGTTTGTGAACTTTCGCATTGTCCAGCTAGTAGTTTTGTAAGATATCTTGACTTCTCAGGATTGTATGACAATTATAGCCTTGAACTGCAACATATATTTTCTTTCAAATTGGAGATTTTTGTTGTTTTTAGTGTGCAATAGTTCCGGTTGAGGCTTATTTAATTCATAAGCATTGAAATAAAACACTTCAAATCTGAACAGGGCTTCTGATTATCCCAAGGAATATGATGGAGCATGCCTACAAATGAGATTATCCTATAGCCCGGCTGCACAGTTCTTTCTCTTCTTCGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGTCTGCTCAGAATTCTGATATATAAGGTACTGCAGCCTGCATGAGAAATGACATCTTTGACTCCTACATTGTCCAAGTGTGGTGATTGAAGCCGATCACTAAAGATAAAAATCTGATGAAGTAGCTTATACTACTTGCCTCTACACATATCTTGTAAATCCTGTGAATGTGATGAATTTGTTTCAGGCATATGAAGACGGGAAGACTACCATGTCTATTCAAGAAAGAAAGGCTAGTCTCAAAGAGTTCTATGGTAAGTGGCTAAGAAGATAAAAGCTGCCCGTTCTTCAACTTAAGGTGCATTAAAATTTGGAGTCTTGCTAATCCTATATTTTAGTTCTGCAAATACAGGGGTGATATTTCCTTCTCTAGTGCAACTTCAAAGAGGAATTACCGACATAGAAGAGAGAAAACAGAGAGAATTTTATGCTGCAAAATTCAAAAGAAAGGATCGGTTGGACAAAGGGAAAATCTCCGAAATCGACTTGGAAAGAGAGGAAGAATGTGGTATTTGCATGGAGCTAAACAGCAAGGTTGTCTTGCCTAGTTGCAATCATTCAATGTGCATGAAGTGTTACAGGAGTTGGTAAGCTTTCTGCTGTTTTCATCTGCTATCAGTTTCTAATTGAGTACTAGTCCTTTCTTTGCAAAAAAGGGTTGGATTATTTGTGGGTTATTTGAAGCTGATTTTTGCAACTTGTTATCTTTGTTTCAGGCGCACTCGATCTCAATCATGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTCAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATCGTCGATTTGTCCTTCATTTCTAGGGAAAATTTGAAGAGGCTTTTCATGTTCATTAACAAGTTGCCTTTCATTGTTCCAGATCCAAAACTCATCTCTTATTATCTGAATCCCTATTAA

mRNA sequence

ATGACAGCTCAGCGGAATCATCGCCCATCAAATAAAACGAAATCCAATGATATTTCGAAGTTGAATGACTGTGACGGTGGCGGGGCTTCTGATTATCCCAAGGAATATGATGGAGCATGCCTACAAATGAGATTATCCTATAGCCCGGCTGCACAGTTCTTTCTCTTCTTCGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGTCTGCTCAGAATTCTGATATATAAGGCATATGAAGACGGGAAGACTACCATGTCTATTCAAGAAAGAAAGGCTAGTCTCAAAGAGTTCTATGGGGTGATATTTCCTTCTCTAGTGCAACTTCAAAGAGGAATTACCGACATAGAAGAGAGAAAACAGAGAGAATTTTATGCTGCAAAATTCAAAAGAAAGGATCGGTTGGACAAAGGGAAAATCTCCGAAATCGACTTGGAAAGAGAGGAAGAATGTGGTATTTGCATGGAGCTAAACAGCAAGGTTGTCTTGCCTAGTTGCAATCATTCAATGTGCATGAAGTGTTACAGGAGTTGGCGCACTCGATCTCAATCATGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTCAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATCGTCGATTTGTCCTTCATTTCTAGGGAAAATTTGAAGAGGCTTTTCATGTTCATTAACAAGTTGCCTTTCATTGTTCCAGATCCAAAACTCATCTCTTATTATCTGAATCCCTATTAA

Coding sequence (CDS)

ATGACAGCTCAGCGGAATCATCGCCCATCAAATAAAACGAAATCCAATGATATTTCGAAGTTGAATGACTGTGACGGTGGCGGGGCTTCTGATTATCCCAAGGAATATGATGGAGCATGCCTACAAATGAGATTATCCTATAGCCCGGCTGCACAGTTCTTTCTCTTCTTCGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGTCTGCTCAGAATTCTGATATATAAGGCATATGAAGACGGGAAGACTACCATGTCTATTCAAGAAAGAAAGGCTAGTCTCAAAGAGTTCTATGGGGTGATATTTCCTTCTCTAGTGCAACTTCAAAGAGGAATTACCGACATAGAAGAGAGAAAACAGAGAGAATTTTATGCTGCAAAATTCAAAAGAAAGGATCGGTTGGACAAAGGGAAAATCTCCGAAATCGACTTGGAAAGAGAGGAAGAATGTGGTATTTGCATGGAGCTAAACAGCAAGGTTGTCTTGCCTAGTTGCAATCATTCAATGTGCATGAAGTGTTACAGGAGTTGGCGCACTCGATCTCAATCATGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTCAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATCGTCGATTTGTCCTTCATTTCTAGGGAAAATTTGAAGAGGCTTTTCATGTTCATTAACAAGTTGCCTTTCATTGTTCCAGATCCAAAACTCATCTCTTATTATCTGAATCCCTATTAA

Protein sequence

MTAQRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDCHLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQREFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRSQSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISYYLNPY

Homology

[Close]

BLAST of HG10020399.1 vs. NCBI nr
Match: XP_038904042.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Benincasa hispida])

HSP 1 Score: 432.2 bits (1110), Expect = 3.1e-117
Identity = 218/245 (88.98%), Postives = 223/245 (91.02%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEY GACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYGGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           H AGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR
Sbjct: 62  HFAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWR RS
Sbjct: 122 EVYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRARS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFI+KLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFIDKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. NCBI nr
Match: XP_011651863.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >XP_031738614.1 E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN58763.1 hypothetical protein Csa_000946 [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 5.2e-117
Identity = 216/245 (88.16%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQ+GITDIEERKQR
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQKGITDIEERKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAKFKR DRL+KGKISEIDLEREEECGICMELN+KVVLP+CNHSMCMKCYRSWRTRS
Sbjct: 122 EVYAAKFKRTDRLNKGKISEIDLEREEECGICMELNNKVVLPNCNHSMCMKCYRSWRTRS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISR+NLKRLFMFINKLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRDNLKRLFMFINKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. NCBI nr
Match: XP_008442427.1 (PREDICTED: uncharacterized protein LOC103486301 [Cucumis melo] >KAA0044165.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa] >TYK24968.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa])

HSP 1 Score: 427.9 bits (1099), Expect = 5.8e-116
Identity = 214/245 (87.35%), Postives = 224/245 (91.43%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAK++R D L+KGKISEID+EREEECGICMELN+KVVLP+CNHSMCMKCYRSWRTRS
Sbjct: 122 EVYAAKYRRTDPLNKGKISEIDMEREEECGICMELNTKVVLPNCNHSMCMKCYRSWRTRS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. NCBI nr
Match: XP_022145744.1 (uncharacterized protein LOC111015127 isoform X1 [Momordica charantia] >XP_022145745.1 uncharacterized protein LOC111015127 isoform X1 [Momordica charantia] >XP_022145746.1 uncharacterized protein LOC111015127 isoform X1 [Momordica charantia])

HSP 1 Score: 415.2 bits (1066), Expect = 3.9e-112
Identity = 208/245 (84.90%), Postives = 220/245 (89.80%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYP+EYDGACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPREYDGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSL+QLQ GI DIE+RKQR
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLLQLQGGINDIEDRKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAK+KRKD+LD+GKI+EIDLEREEECGICMELN  VVLPSCNHSMCMKCYRSWRTRS
Sbjct: 122 EVYAAKYKRKDQLDRGKITEIDLEREEECGICMELNCMVVLPSCNHSMCMKCYRSWRTRS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWI T SSEIVDLSFISRENLKRLFMFI+KLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWIYTGSSEIVDLSFISRENLKRLFMFIDKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. NCBI nr
Match: XP_023527445.1 (LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 2.1e-110
Identity = 206/245 (84.08%), Postives = 217/245 (88.57%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEY GACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYGGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLV LQRG  DIE+R+ R
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVLLQRGTNDIEDRQHR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAK+KRKD+LDKGKISEIDLEREEECGICMELNSKVVLP+C HSMCMKCYRSWR RS
Sbjct: 122 EAYAAKYKRKDQLDKGKISEIDLEREEECGICMELNSKVVLPTCCHSMCMKCYRSWRARS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSL+RVNSGDLWICTSSSEIVDL FIS ENLKRLFMFI+KLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLRRVNSGDLWICTSSSEIVDLPFISSENLKRLFMFIDKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.8e-89
Identity = 158/240 (65.83%), Postives = 191/240 (79.58%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      AS+YP+EYDG  +QMRLSYSPAA  FLF +QWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           H AGALGLLRILIYKAY DGKTTMS+ ERK S++EFY V+FPSL+QL  GITD+EERKQ+
Sbjct: 62  HFAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E    ++++KDR DKGK+SEIDLEREEECGIC+E+ +KVVLP+CNHSMC+ CYR+WR RS
Sbjct: 122 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCR SLKRVNSGDLWI T S+EI DL  I +ENLKRL ++I+KLP +  DP L+ Y
Sbjct: 182 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of HG10020399.1 vs. ExPASy Swiss-Prot
Match: Q803C1 (E3 ubiquitin-protein ligase rnf8 OS=Danio rerio OX=7955 GN=rnf8 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 90  QERKASLKEFYGVIFPSLVQLQRGITDIEERKQREFYAAK-FKRKDRLDKGKI----SEI 149
           ++ + +LKE   VI   L    +G  ++ + K +E    K  K K +  K ++    +E+
Sbjct: 327 KQLEEALKEHRKVI-EELKHAWQGFKEVLQAKDKELEVTKEEKEKAKAQKEEVVTQMTEV 386

Query: 150 DLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRSQSCPFC 190
            LE E +C IC EL  + V  +C HS C  C   WR R   CP C
Sbjct: 387 -LESELQCSICSELFIEAVTLNCAHSFCQHCISEWRNRKDKCPMC 429

[Close]

BLAST of HG10020399.1 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 25/76 (32.89%), Postives = 36/76 (47.37%), Query Frame = 0


Query: 144 IDLEREEECGICMELNSKVVLPS---------CNHSMCMKCYRSWRTRSQ-------SCP 203
           +   ++  CGICME+  +   PS         CNH+ C+KC R WR+  Q       SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332

[Close]

BLAST of HG10020399.1 vs. ExPASy Swiss-Prot
Match: Q9TT91 (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 25/76 (32.89%), Postives = 36/76 (47.37%), Query Frame = 0


Query: 144 IDLEREEECGICMELNSKVVLPS---------CNHSMCMKCYRSWRTRSQ-------SCP 203
           +   ++  CGICME+  +   PS         CNH+ C+KC R WR+  Q       SCP
Sbjct: 269 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 328

[Close]

BLAST of HG10020399.1 vs. ExPASy Swiss-Prot
Match: Q9QXP6 (E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus OX=10090 GN=Mkrn1 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 25/68 (36.76%), Postives = 33/68 (48.53%), Query Frame = 0


Query: 152 CGICMELNSKVVLPS---------CNHSMCMKCYRSWRTRSQ-------SCPFCRDSLKR 204
           CGICME+  +   PS         CNH+ C+KC R WR+  Q       SCP CR +   
Sbjct: 281 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 340

[Close]

BLAST of HG10020399.1 vs. ExPASy TrEMBL
Match: A0A0A0LA78 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731740 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.5e-117
Identity = 216/245 (88.16%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQ+GITDIEERKQR
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQKGITDIEERKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAKFKR DRL+KGKISEIDLEREEECGICMELN+KVVLP+CNHSMCMKCYRSWRTRS
Sbjct: 122 EVYAAKFKRTDRLNKGKISEIDLEREEECGICMELNNKVVLPNCNHSMCMKCYRSWRTRS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISR+NLKRLFMFINKLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRDNLKRLFMFINKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. ExPASy TrEMBL
Match: A0A5D3DMZ7 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00850 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.8e-116
Identity = 214/245 (87.35%), Postives = 224/245 (91.43%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAK++R D L+KGKISEID+EREEECGICMELN+KVVLP+CNHSMCMKCYRSWRTRS
Sbjct: 122 EVYAAKYRRTDPLNKGKISEIDMEREEECGICMELNTKVVLPNCNHSMCMKCYRSWRTRS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. ExPASy TrEMBL
Match: A0A1S3B5N9 (uncharacterized protein LOC103486301 OS=Cucumis melo OX=3656 GN=LOC103486301 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.8e-116
Identity = 214/245 (87.35%), Postives = 224/245 (91.43%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAK++R D L+KGKISEID+EREEECGICMELN+KVVLP+CNHSMCMKCYRSWRTRS
Sbjct: 122 EVYAAKYRRTDPLNKGKISEIDMEREEECGICMELNTKVVLPNCNHSMCMKCYRSWRTRS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. ExPASy TrEMBL
Match: A0A6J1CVC0 (uncharacterized protein LOC111015127 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015127 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.9e-112
Identity = 208/245 (84.90%), Postives = 220/245 (89.80%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYP+EYDGACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPREYDGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSL+QLQ GI DIE+RKQR
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLLQLQGGINDIEDRKQR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAK+KRKD+LD+GKI+EIDLEREEECGICMELN  VVLPSCNHSMCMKCYRSWRTRS
Sbjct: 122 EVYAAKYKRKDQLDRGKITEIDLEREEECGICMELNCMVVLPSCNHSMCMKCYRSWRTRS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSLKRVNSGDLWI T SSEIVDLSFISRENLKRLFMFI+KLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLKRVNSGDLWIYTGSSEIVDLSFISRENLKRLFMFIDKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. ExPASy TrEMBL
Match: A0A6J1F2V6 (LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441644 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.3e-110
Identity = 205/245 (83.67%), Postives = 217/245 (88.57%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      ASDYPKEY GACLQMRLSYSPAAQFFLFFVQWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASDYPKEYGGACLQMRLSYSPAAQFFLFFVQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLV LQRG  DIE+R+ R
Sbjct: 62  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVLLQRGTNDIEDRQHR 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E YAAK+KRKD+LDKGKISEIDLEREEECGICMELNSKVVLP+C HSMCMKCYRSWR RS
Sbjct: 122 EAYAAKYKRKDQLDKGKISEIDLEREEECGICMELNSKVVLPTCCHSMCMKCYRSWRARS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCRDSL+RVNSGDLWICTSS+EIVDL FIS ENLKRLFMFI+KLP IVPDPKLISY
Sbjct: 182 QSCPFCRDSLRRVNSGDLWICTSSTEIVDLPFISSENLKRLFMFIDKLPLIVPDPKLISY 241

Query: 244 YLNPY 249
           YLN Y
Sbjct: 242 YLNHY 242

[Close]

BLAST of HG10020399.1 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 328.9 bits (842), Expect = 3.4e-90
Identity = 158/240 (65.83%), Postives = 191/240 (79.58%), Query Frame = 0


Query: 4   QRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDC 63
           +++ + S K    DI   N      AS+YP+EYDG  +QMRLSYSPAA  FLF +QWTDC
Sbjct: 2   RKSFKDSLKALEADIQFANTL----ASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDC 61

Query: 64  HLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQR 123
           H AGALGLLRILIYKAY DGKTTMS+ ERK S++EFY V+FPSL+QL  GITD+EERKQ+
Sbjct: 62  HFAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 121

Query: 124 EFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRS 183
           E    ++++KDR DKGK+SEIDLEREEECGIC+E+ +KVVLP+CNHSMC+ CYR+WR RS
Sbjct: 122 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 181

Query: 184 QSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLISY 243
           QSCPFCR SLKRVNSGDLWI T S+EI DL  I +ENLKRL ++I+KLP +  DP L+ Y
Sbjct: 182 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of HG10020399.1 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein )

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-84
Identity = 144/220 (65.45%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 29  ASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDCHLAGALGLLRILIYKAYEDGKTTMS 88
           A DYP+E DGA +QMRLSY+PAAQF LF VQWTDCHLAG LGLLR+LIY  Y DGKTTMS
Sbjct: 36  ALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMS 95

Query: 89  IQERKASLKEFYGVIFPSLVQLQRGITDIEERKQREFYAAKFKRKDRLDKGKISEIDLER 148
           + ERK S+K+FY VIFPSL+QL+RGITD+++RKQ+E    +++ KD  +K K+SEID+ER
Sbjct: 96  VYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIER 155

Query: 149 EEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRSQSCPFCRDSLKRVNSGDLWICTSSS 208
           EEECGICME+N+ VVLP+C HS+C+KCYR W  RS+SCPFCRDSLKRVNSGDLW+    S
Sbjct: 156 EEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKS 215

Query: 209 EIVDLSFISRENLKRLFMFINKLPFIVPDPKLISYYLNPY 249
           + V++  I REN KRLF++I KLP +VPD    S   +PY
Sbjct: 216 DTVNMYTIERENKKRLFVYIEKLPLVVPDQVFAS---SPY 252

[Close]

BLAST of HG10020399.1 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 308.1 bits (788), Expect = 6.2e-84
Identity = 150/246 (60.98%), Postives = 186/246 (75.61%), Query Frame = 0


Query: 3   AQRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTD 62
           A+ + + S K    DI   N      A DYP+E DGA +QMRLSY+PAAQF LF VQWTD
Sbjct: 2   AKVSFKDSLKALEADIQHANTV----ALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTD 61

Query: 63  CHLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQ 122
           CHLAG LGLLR+LIY  Y DGKTTMS+ ERK S+K+FY VIFPSL+QL+RGITD+++RKQ
Sbjct: 62  CHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQ 121

Query: 123 REFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTR 182
           +E    +++ KD  +K K+SEID+EREEECGICME+N+ VVLP+C HS+C+KCYR W  R
Sbjct: 122 KEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGR 181

Query: 183 SQSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLIS 242
           S+SCPFCRDSLKRVNSGDLW+    S+ V++  I REN KRLF++I KLP +VPD    S
Sbjct: 182 SESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFAS 240

Query: 243 YYLNPY 249
              +PY
Sbjct: 242 ---SPY 240

[Close]

BLAST of HG10020399.1 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 298.5 bits (763), Expect = 4.9e-81
Identity = 150/246 (60.98%), Postives = 186/246 (75.61%), Query Frame = 0


Query: 3   AQRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTD 62
           A+ + + S K    DI   N      A DYP+E DGA +QMRLSYSP AQFFLF VQWTD
Sbjct: 2   AKLSFKDSLKALEADIQHANTL----ALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTD 61

Query: 63  CHLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQ 122
           C LAG LGLLR+LIY  Y DGKTTMS+ ERKAS++EF  VI PSL QLQRG+TDI++ KQ
Sbjct: 62  CKLAGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQ 121

Query: 123 REFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTR 182
           +E    ++++K   D+ ++SEI++EREEECGICME+NSKVVLP+C HS+C+KCYR WR R
Sbjct: 122 KEVCKMRYRKK---DESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGR 181

Query: 183 SQSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLIS 242
           SQSCPFCRDSLKRV+SGDLW+    ++ V+L+ I+REN KRLFM+I KLP +VPD     
Sbjct: 182 SQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQ---V 237

Query: 243 YYLNPY 249
           Y  +PY
Sbjct: 242 YASSPY 237

[Close]

BLAST of HG10020399.1 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-71
Identity = 139/246 (56.50%), Postives = 174/246 (70.73%), Query Frame = 0


Query: 3   AQRNHRPSNKTKSNDISKLNDCDGGGASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTD 62
           A+ + + S K    DI   N      A DYP+E DGA +QMRLSYSP AQFFLF VQWTD
Sbjct: 2   AKLSFKDSLKALEADIQHANTL----ALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTD 61

Query: 63  CHLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQ 122
           C LAG LGLLR+LIY  Y DGKTTMS+ ERKAS++EF                DI++ KQ
Sbjct: 62  CKLAGFLGLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQ 121

Query: 123 REFYAAKFKRKDRLDKGKISEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTR 182
           +E    ++++K   D+ ++SEI++EREEECGICME+NSKVVLP+C HS+C+KCYR WR R
Sbjct: 122 KEVCKMRYRKK---DESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGR 181

Query: 183 SQSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPFIVPDPKLIS 242
           SQSCPFCRDSLKRV+SGDLW+    ++ V+L+ I+REN KRLFM+I KLP +VPD     
Sbjct: 182 SQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQ---V 222

Query: 243 YYLNPY 249
           Y  +PY
Sbjct: 242 YASSPY 222

The following BLAST results are available for this feature:

BLAST of HG10020399.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904042.1	3.1e-117	88.98	E3 ubiquitin-protein ligase AIRP2 isoform X1 [Benincasa hispida]	[more]
XP_011651863.1	5.2e-117	88.16	E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >XP_031738614.1 E3 ubiquitin...	[more]
XP_008442427.1	5.8e-116	87.35	PREDICTED: uncharacterized protein LOC103486301 [Cucumis melo] >KAA0044165.1 E3 ...	[more]
XP_022145744.1	3.9e-112	84.90	uncharacterized protein LOC111015127 isoform X1 [Momordica charantia] >XP_022145...	[more]
XP_023527445.1	2.1e-110	84.08	LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 [Cucur...	[more]

BLAST of HG10020399.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	4.8e-89	65.83	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q803C1	1.1e-05	32.38	E3 ubiquitin-protein ligase rnf8 OS=Danio rerio OX=7955 GN=rnf8 PE=2 SV=1	[more]
Q9UHC7	1.6e-04	32.89	E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3	[more]
Q9TT91	1.6e-04	32.89	E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 ...	[more]
Q9QXP6	1.6e-04	36.76	E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus OX=10090 GN=Mkrn1 PE=1 SV=...	[more]

BLAST of HG10020399.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA78	2.5e-117	88.16	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731740 P...	[more]
A0A5D3DMZ7	2.8e-116	87.35	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B5N9	2.8e-116	87.35	uncharacterized protein LOC103486301 OS=Cucumis melo OX=3656 GN=LOC103486301 PE=...	[more]
A0A6J1CVC0	1.9e-112	84.90	uncharacterized protein LOC111015127 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1F2V6	2.3e-110	83.67	LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 OS=Cuc...	[more]

BLAST of HG10020399.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01520.1	3.4e-90	65.83	RING/U-box superfamily protein	[more]
AT3G47160.2	1.6e-84	65.45	RING/U-box superfamily protein	[more]
AT3G47160.1	6.2e-84	60.98	RING/U-box superfamily protein	[more]
AT5G58787.1	4.9e-81	60.98	RING/U-box superfamily protein	[more]
AT5G58787.2	1.6e-71	56.50	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 152..189 e-value: 2.2E-6 score: 37.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 152..190 score: 12.194218
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 149..195 e-value: 1.1E-9 score: 38.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 28..244
None	No IPR available	PANTHER	PTHR15315:SF31	E3 UBIQUITIN-PROTEIN LIGASE AIRP2	coord: 28..244
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 137..195
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 127..198 e-value: 5.0E-15 score: 56.6
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 167..176

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10020399	HG10020399	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10020399.1-cds	HG10020399.1-cds-Chr04:31519635..31519845	CDS
HG10020399.1-cds	HG10020399.1-cds-Chr04:31519975..31520209	CDS
HG10020399.1-cds	HG10020399.1-cds-Chr04:31520308..31520374	CDS
HG10020399.1-cds	HG10020399.1-cds-Chr04:31520535..31520685	CDS
HG10020399.1-cds	HG10020399.1-cds-Chr04:31521991..31522073	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10020399.1	HG10020399.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009789	positive regulation of abscisic acid-activated signaling pathway
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity