HG10020309.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020309.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr04: 30760779 .. 30763471 (-)
Sequence length	744
RNA-Seq Expression	HG10020309.1
Synteny	HG10020309.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTCCACACAAAACTGCATTTCTTCACACTTCAAACTTCACTCACCCTGTTCTTGCAGCGCCAAATGCCAGCCATGTCATGCAATTTTGCAAGACCTCAATCGTACATTCTTGTTTTCTCTCTATAATTTACGGTTTTTTGCTTGTTTCTTCTTTGTCCATTCTTGTTCGTCGATTTCTTCCGTTTAATTATTGCTCCTTCCTTCTCCTCAATTCTATTATGGTATCATCGGATTTGACTCTTCGTCGTATCTCTGAAACTCTGAACTGATCTCTTCCTCTTTCTTCTGGTTCATTATTGCACTTGATGCTTTCAGATTCAACTATGGCTCGACAGGTACCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTATGTGTGATTTTGCCCTAATTTGGCGTTTGATTTCGGAATGTAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCGTCGGTTTCTTTCAATACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGGTCTGCTACTTCCTTTTGGTTTTTTTTTTTTTCCTTCTCTGTTTCTCTTTTGTTTAACTGTGTGTTCGTTAGAGGCTGAAAATGTAGCACATTATGCTTGGTTTGTGTTGGGAAAGACTTGAGTCTTAATAATGGTTGATTATAGTAGAATTGCTTTTGTTTTTAAGATTTCGGTTCAATTATGCAAATACATTGCATTGAGTCGTGTCACTGTTAGGAGTAGGACTGCTTTTTCATGTCTTATTTTTCTGAAGGGATTGAGTTGAAGTAGTTGCAGAGTACCCCTTTTTCAAAATTTGTACTGATTTTCTTTAAAGTTCAATTAGCCTAGGCCACAGAGTATAGGGATATGGATGTATTAGTGATTAAAAATTTTGTAGTTCGAATCACTAAAAAAAAAAGCTATGTGATACAGGCCTTGTTTGAATGTTGCAATGATTTTATGAGAAAATGTCAACTGTTTTGGAAGCTCAAAATGATAAATGCCCACTTTTTAAAAACTATTGCTAATTGACCTTCTGCTGATATCATGCATATGTAATTATCGATTGGCCCTTCATTCTTCAAAATTTTCTACTAGTCACGCGCCTGTCTTCTTCTTTCTCTTTTCTTTGAGGAGTTTTTTTTTCTTCTTCTTCTTCTTTTCTTCTTCATCTTCTTCTCTGAAGGTTAGTGCAAAGATTTTTTTCTTCTTCCTCTTCTCCGGCGAGCAACCATACCAGATATCTGGCAAGCTCCAACTTGCACATGCTGGCAGCGAGCGCCCAAATGCCGGAGAGAACGAGAGAGCGAAACAATGAGAGAGATGAGAGCAATATGTGAGTGAAGGATAGAGAATGAGAGAGAGGAGCGAGAGCAAGAGAGCGAAGAGCGTGATTGGTCCTTCCACATGCGTAAGAGAGTTTTGTTTTGTAATTTCACCGGTGTCAACGTCAACAAATGGTAAAAAAAATCCTCATTTTCAAAAAGTGAGCCAAATCTCATTTTTCCCTCTCAATTTGGGTTATCCATATAAAAACCCTCGACTTTATTAATGTTTTAAAAAGAGCTTTTAAGTACAAATAAAGTATTTTTAAATACTTAAAAGTCAATCTAAATAGATCAATAACCTAAATAGTAAACTGTAGAATTTTACTCTAAAAAACTTTGTTTTTTTTTATTTATTTTAAATTTTATACGGATGATCTAATGAGTTGTGCCGAAATTGATATTTGATTTTGAGAAATTTTCTAAATCACTAACATCAACATTTTTTTTTTCTCTCGCTCCTTACCTTCCCTCTCATTAGTCATTCCTCACTTTTCCTCTTGCCCTTGCTCTTTTGCTCTTGCTTCTTATTTGTCCTCTCTTGCTCCCTATCCCAACAAGGGCTTAATTGGAAGTGTAGCCATAAAAGGAGAGGGGGAAAATAGCTAGACAAGAGGAAAATGGGTAGCAAGAGCCCGATAATAAAGAACATCAAATAAGCTTGCTGACATTAGCAAATTGTTAGACAATTTTATGTCGAGAAATCAAGTCAAATTTCATTTTTGCGCAAATATTTAGGTTAGTCTGTGAAAATACTCAAAGACTTTTGTATGGTTATTTTGGTCCGTATTTGCTAAATTTCATCATGTTAATGGTTTTTAGTCAACTGGATCATTCTACCATGATAAGAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAAGATAAAAAGAAGTACAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCACTCTCTTGAAGCAGAAAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGAACAAACTCTTTGTTTTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGTAACAGCCAAGGGATTCCTCTACTCTTTTCATGTCTATATTGTCAACTGATTAAATAA

mRNA sequence

ATGTCTGCTCCACACAAAACTGCATTTCTTCACACTTCAAACTTCACTCACCCTGTTCTTGCAGCGCCAAATGCCAGCCATGTCATGCAATTTTGCAAGACCTCAATCGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCGTCGGTTTCTTTCAATACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGATAAGAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAAGATAAAAAGAAGTACAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCACTCTCTTGAAGCAGAAAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGAACAAACTCTTTGTTTTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGTAACAGCCAAGGGATTCCTCTACTCTTTTCATGTCTATATTGTCAACTGATTAAATAA

Coding sequence (CDS)

ATGTCTGCTCCACACAAAACTGCATTTCTTCACACTTCAAACTTCACTCACCCTGTTCTTGCAGCGCCAAATGCCAGCCATGTCATGCAATTTTGCAAGACCTCAATCGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCGTCGGTTTCTTTCAATACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGATAAGAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAAGATAAAAAGAAGTACAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCACTCTCTTGAAGCAGAAAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGAACAAACTCTTTGTTTTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGTAACAGCCAAGGGATTCCTCTACTCTTTTCATGTCTATATTGTCAACTGATTAAATAA

Protein sequence

MSAPHKTAFLHTSNFTHPVLAAPNASHVMQFCKTSIEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRRSNEELVQDGNSQGIPLLFSCLYCQLIK

Homology

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BLAST of HG10020309.1 vs. NCBI nr
Match: XP_008442557.1 (PREDICTED: uncharacterized protein LOC103486392 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92
Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDK 96
           EDGWPLGLR+MNARV GLAGNHDLSASVSFNTL THSPSSFTDSSSDLDT+STGSFY DK
Sbjct: 11  EDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTGSFYPDK 70

Query: 97  SITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSS 156
           SITLGSLIGVSSI ELSRRSTKGN+VEILEDKKKYKSKPWLFSLSLCIKLRPDAVS +SS
Sbjct: 71  SITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSFSSS 130

Query: 157 PSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGE 216
           PSL+HSLEAE++ATRN R HN TLYGPNDYS + P  VSG NSLFSSD+V PVSF  AGE
Sbjct: 131 PSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPP--VSGANSLFSSDRVDPVSFAQAGE 190

Query: 217 EESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           EESRRS+ ELVQ+GNSQGIPLLFSCLYCQLIK
Sbjct: 191 EESRRSDGELVQNGNSQGIPLLFSCLYCQLIK 220

[Close]

BLAST of HG10020309.1 vs. NCBI nr
Match: KAA0044086.1 (uncharacterized protein E6C27_scaffold236G004360 [Cucumis melo var. makuwa] >TYK25051.1 uncharacterized protein E5676_scaffold352G001720 [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92
Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDK 96
           EDGWPLGLR+MNARV GLAGNHDLSASVSFNTL THSPSSFTDSSSDLDT+STGSFY DK
Sbjct: 5   EDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTGSFYPDK 64

Query: 97  SITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSS 156
           SITLGSLIGVSSI ELSRRSTKGN+VEILEDKKKYKSKPWLFSLSLCIKLRPDAVS +SS
Sbjct: 65  SITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSFSSS 124

Query: 157 PSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGE 216
           PSL+HSLEAE++ATRN R HN TLYGPNDYS + P  VSG NSLFSSD+V PVSF  AGE
Sbjct: 125 PSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPP--VSGANSLFSSDRVDPVSFAQAGE 184

Query: 217 EESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           EESRRS+ ELVQ+GNSQGIPLLFSCLYCQLIK
Sbjct: 185 EESRRSDGELVQNGNSQGIPLLFSCLYCQLIK 214

[Close]

BLAST of HG10020309.1 vs. NCBI nr
Match: XP_011651900.1 (uncharacterized protein LOC101206844 [Cucumis sativus] >KGN58875.1 hypothetical protein Csa_001533 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 7.6e-92
Identity = 184/212 (86.79%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDK 96
           EDGWPLGLR+MNARV G+AGNHDLSASVSFNTL THSPSSFTDSSSDLDTESTGSFY DK
Sbjct: 11  EDGWPLGLRVMNARVGGVAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYPDK 70

Query: 97  SITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSS 156
           SITLGSLIGVSSI ELSRRSTKGN+VEILEDKKKYKSKP LFSLSLCIKLRPDAVS +SS
Sbjct: 71  SITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPDAVSFSSS 130

Query: 157 PSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGE 216
           PSL+HSLEAE++ATRN R HNPTLYGPNDYSP     V G NSLFSSDQV PVSFE AGE
Sbjct: 131 PSLQHSLEAERKATRNRRNHNPTLYGPNDYSP-----VPGANSLFSSDQVDPVSFEQAGE 190

Query: 217 EESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           EESRRS+ ELV++GNSQGIPLLFSCLYCQLIK
Sbjct: 191 EESRRSDGELVRNGNSQGIPLLFSCLYCQLIK 217

[Close]

BLAST of HG10020309.1 vs. NCBI nr
Match: XP_022145575.1 (uncharacterized protein LOC111014995 isoform X2 [Momordica charantia])

HSP 1 Score: 347.8 bits (891), Expect = 7.6e-92
Identity = 182/211 (86.26%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDKS 96
           EDGWPLGLRLMNARVGLAGN DLSASVSFNTL THSPSSFTDSSSDLDTESTGSFYHDKS
Sbjct: 5   EDGWPLGLRLMNARVGLAGNRDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDKS 64

Query: 97  ITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSP 156
           ITLGSLIGVSSI ELSRRSTKGN+VE LEDKKK KSKPWLFSLSLCIKLRPDAVSL SSP
Sbjct: 65  ITLGSLIGVSSILELSRRSTKGNKVETLEDKKKDKSKPWLFSLSLCIKLRPDAVSLRSSP 124

Query: 157 SLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEE 216
           SLEHSL AE+ ATRNHRI NPT+YGPND+SPIRP  VSGTNSLF+ DQVAP+SF P  EE
Sbjct: 125 SLEHSLAAERIATRNHRIQNPTMYGPNDFSPIRP--VSGTNSLFAGDQVAPISFAPVVEE 184

Query: 217 ESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
            +R+SN EL   GNSQG+PLLFSCLYCQLIK
Sbjct: 185 GARKSNGEL---GNSQGVPLLFSCLYCQLIK 210

[Close]

BLAST of HG10020309.1 vs. NCBI nr
Match: KAG6580547.1 (hypothetical protein SDJN03_20549, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342.8 bits (878), Expect = 2.4e-90
Identity = 182/212 (85.85%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDKS 96
           EDGWPLGLRLMN RVGLAGNHDLSASVSFNTL THSPSSFTDSSSDLDTESTGSFYHDKS
Sbjct: 11  EDGWPLGLRLMNTRVGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDKS 70

Query: 97  ITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSP 156
           ITLGSLIGVSS+ ELSRRSTKGN VEIL+DKKKYKSKPWLFSLSLCIKLRPDAVSL+SSP
Sbjct: 71  ITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLRPDAVSLSSSP 130

Query: 157 SLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGE 216
           SLEHSLEAE+RA      HNPT+YGPNDYSP+RP  VSGTNSLFSSDQVAPV  F PA  
Sbjct: 131 SLEHSLEAERRA------HNPTMYGPNDYSPVRP--VSGTNSLFSSDQVAPVQPFAPAVT 190

Query: 217 EESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           EESRRS  EL +DG  QGIP LFSCLYCQLIK
Sbjct: 191 EESRRSIGELAEDGYCQGIPPLFSCLYCQLIK 214

[Close]

BLAST of HG10020309.1 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.5e-05
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 72  SPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVS 107
           SP+  + SSSDLDTESTGSF+HD+SITLG+L+G S
Sbjct: 9   SPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFS 43

[Close]

BLAST of HG10020309.1 vs. ExPASy TrEMBL
Match: A0A5A7TPR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001720 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92
Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDK 96
           EDGWPLGLR+MNARV GLAGNHDLSASVSFNTL THSPSSFTDSSSDLDT+STGSFY DK
Sbjct: 5   EDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTGSFYPDK 64

Query: 97  SITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSS 156
           SITLGSLIGVSSI ELSRRSTKGN+VEILEDKKKYKSKPWLFSLSLCIKLRPDAVS +SS
Sbjct: 65  SITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSFSSS 124

Query: 157 PSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGE 216
           PSL+HSLEAE++ATRN R HN TLYGPNDYS + P  VSG NSLFSSD+V PVSF  AGE
Sbjct: 125 PSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPP--VSGANSLFSSDRVDPVSFAQAGE 184

Query: 217 EESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           EESRRS+ ELVQ+GNSQGIPLLFSCLYCQLIK
Sbjct: 185 EESRRSDGELVQNGNSQGIPLLFSCLYCQLIK 214

[Close]

BLAST of HG10020309.1 vs. ExPASy TrEMBL
Match: A0A1S3B5Y9 (uncharacterized protein LOC103486392 OS=Cucumis melo OX=3656 GN=LOC103486392 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92
Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDK 96
           EDGWPLGLR+MNARV GLAGNHDLSASVSFNTL THSPSSFTDSSSDLDT+STGSFY DK
Sbjct: 11  EDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTGSFYPDK 70

Query: 97  SITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSS 156
           SITLGSLIGVSSI ELSRRSTKGN+VEILEDKKKYKSKPWLFSLSLCIKLRPDAVS +SS
Sbjct: 71  SITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSFSSS 130

Query: 157 PSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGE 216
           PSL+HSLEAE++ATRN R HN TLYGPNDYS + P  VSG NSLFSSD+V PVSF  AGE
Sbjct: 131 PSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPP--VSGANSLFSSDRVDPVSFAQAGE 190

Query: 217 EESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           EESRRS+ ELVQ+GNSQGIPLLFSCLYCQLIK
Sbjct: 191 EESRRSDGELVQNGNSQGIPLLFSCLYCQLIK 220

[Close]

BLAST of HG10020309.1 vs. ExPASy TrEMBL
Match: A0A0A0LA63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734280 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.7e-92
Identity = 184/212 (86.79%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDK 96
           EDGWPLGLR+MNARV G+AGNHDLSASVSFNTL THSPSSFTDSSSDLDTESTGSFY DK
Sbjct: 11  EDGWPLGLRVMNARVGGVAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYPDK 70

Query: 97  SITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSS 156
           SITLGSLIGVSSI ELSRRSTKGN+VEILEDKKKYKSKP LFSLSLCIKLRPDAVS +SS
Sbjct: 71  SITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPDAVSFSSS 130

Query: 157 PSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGE 216
           PSL+HSLEAE++ATRN R HNPTLYGPNDYSP     V G NSLFSSDQV PVSFE AGE
Sbjct: 131 PSLQHSLEAERKATRNRRNHNPTLYGPNDYSP-----VPGANSLFSSDQVDPVSFEQAGE 190

Query: 217 EESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           EESRRS+ ELV++GNSQGIPLLFSCLYCQLIK
Sbjct: 191 EESRRSDGELVRNGNSQGIPLLFSCLYCQLIK 217

[Close]

BLAST of HG10020309.1 vs. ExPASy TrEMBL
Match: A0A6J1CUV3 (uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014995 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.7e-92
Identity = 182/211 (86.26%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDKS 96
           EDGWPLGLRLMNARVGLAGN DLSASVSFNTL THSPSSFTDSSSDLDTESTGSFYHDKS
Sbjct: 5   EDGWPLGLRLMNARVGLAGNRDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDKS 64

Query: 97  ITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSP 156
           ITLGSLIGVSSI ELSRRSTKGN+VE LEDKKK KSKPWLFSLSLCIKLRPDAVSL SSP
Sbjct: 65  ITLGSLIGVSSILELSRRSTKGNKVETLEDKKKDKSKPWLFSLSLCIKLRPDAVSLRSSP 124

Query: 157 SLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEE 216
           SLEHSL AE+ ATRNHRI NPT+YGPND+SPIRP  VSGTNSLF+ DQVAP+SF P  EE
Sbjct: 125 SLEHSLAAERIATRNHRIQNPTMYGPNDFSPIRP--VSGTNSLFAGDQVAPISFAPVVEE 184

Query: 217 ESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
            +R+SN EL   GNSQG+PLLFSCLYCQLIK
Sbjct: 185 GARKSNGEL---GNSQGVPLLFSCLYCQLIK 210

[Close]

BLAST of HG10020309.1 vs. ExPASy TrEMBL
Match: A0A6J1CVN1 (uncharacterized protein LOC111014995 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014995 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.6e-90
Identity = 182/216 (84.26%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTE-----STGSF 96
           EDGWPLGLRLMNARVGLAGN DLSASVSFNTL THSPSSFTDSSSDLDTE     STGSF
Sbjct: 5   EDGWPLGLRLMNARVGLAGNRDLSASVSFNTLRTHSPSSFTDSSSDLDTEVIGFQSTGSF 64

Query: 97  YHDKSITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVS 156
           YHDKSITLGSLIGVSSI ELSRRSTKGN+VE LEDKKK KSKPWLFSLSLCIKLRPDAVS
Sbjct: 65  YHDKSITLGSLIGVSSILELSRRSTKGNKVETLEDKKKDKSKPWLFSLSLCIKLRPDAVS 124

Query: 157 LNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFE 216
           L SSPSLEHSL AE+ ATRNHRI NPT+YGPND+SPIRP  VSGTNSLF+ DQVAP+SF 
Sbjct: 125 LRSSPSLEHSLAAERIATRNHRIQNPTMYGPNDFSPIRP--VSGTNSLFAGDQVAPISFA 184

Query: 217 PAGEEESRRSNEELVQDGNSQGIPLLFSCLYCQLIK 248
           P  EE +R+SN EL   GNSQG+PLLFSCLYCQLIK
Sbjct: 185 PVVEEGARKSNGEL---GNSQGVPLLFSCLYCQLIK 215

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BLAST of HG10020309.1 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-20
Identity = 70/171 (40.94%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 37  EDGWPLGLRLMNARVG--LAGNHD-------LSASVSFNTLLTHSPSSFTDSSSDLDTES 96
           E+GWPLGLR +NAR+G    G H         + S+SF++LL+ SPSS   SSSDLD++S
Sbjct: 5   EEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSS--QSSSDLDSQS 64

Query: 97  TGSFYHDKSITLGSLIGVSSIFELSRRS--TKGNEVEILEDKKKYKS-----KPWLFSLS 156
            GSF+ D+S TLG+LIG+SS  ELSRRS  T+ ++     + + +K+     KPW+F  S
Sbjct: 65  MGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWIF--S 124

Query: 157 LCIKLRPDAVSL-------------NSSPSLEHSLEAEKRATRNHRIHNPT 179
           +C KL  +A  +             N+  SL H L  E+RA  +     PT
Sbjct: 125 ICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIRSTPT 171

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BLAST of HG10020309.1 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 6.8e-06
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 72  SPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVS 107
           SP+  + SSSDLDTESTGSF+HD+SITLG+L+G S
Sbjct: 9   SPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFS 43

The following BLAST results are available for this feature:

BLAST of HG10020309.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442557.1	2.6e-92	86.79	PREDICTED: uncharacterized protein LOC103486392 [Cucumis melo]	[more]
KAA0044086.1	2.6e-92	86.79	uncharacterized protein E6C27_scaffold236G004360 [Cucumis melo var. makuwa] >TYK...	[more]
XP_011651900.1	7.6e-92	86.79	uncharacterized protein LOC101206844 [Cucumis sativus] >KGN58875.1 hypothetical ...	[more]
XP_022145575.1	7.6e-92	86.26	uncharacterized protein LOC111014995 isoform X2 [Momordica charantia]	[more]
KAG6580547.1	2.4e-90	85.85	hypothetical protein SDJN03_20549, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10020309.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR24	9.5e-05	71.43	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV...	[more]

BLAST of HG10020309.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPR1	1.3e-92	86.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B5Y9	1.3e-92	86.79	uncharacterized protein LOC103486392 OS=Cucumis melo OX=3656 GN=LOC103486392 PE=...	[more]
A0A0A0LA63	3.7e-92	86.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734280 PE=4 SV=1	[more]
A0A6J1CUV3	3.7e-92	86.26	uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CVN1	2.6e-90	84.26	uncharacterized protein LOC111014995 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of HG10020309.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02440.1	3.7e-20	40.94	unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac...	[more]
AT3G17950.1	6.8e-06	71.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33544:SF3	60S RIBOSOMAL PROTEIN L36	coord: 37..242
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 37..242

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10020309	HG10020309	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10020309.1-cds	HG10020309.1-cds-Chr04:30760779..30761264	CDS
HG10020309.1-cds	HG10020309.1-cds-Chr04:30762894..30763043	CDS
HG10020309.1-cds	HG10020309.1-cds-Chr04:30763364..30763471	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10020309.1	HG10020309.1-protein	polypeptide