HG10019457.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019457.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Calcium-binding EF-hand
Location	Chr04: 22028228 .. 22028656 (-)
Sequence length	429
RNA-Seq Expression	HG10019457.1
Synteny	HG10019457.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGGTTGTAATCGACGGATCGACGGTGAGGAACTTCGTGAACGACGAATCTCACTTCCAGAAGAGCGTTGACGACGCCTTCGCCGCTCTTGATCTCAACAAGGACGGCGTTCTCTCCCGATCCGAGCTCCGTAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACATCGCTACTACGCCGGAGCAACTCACTCAGCTCTACGATTCTATCTTTGAGCAGTTCGATTGTGACAAAAGCGGAACCGTAGATGCGGAAGAGTTTCGGACGGAAATGAAGAACATCTTGCTCGCAATCGCAGATGGATTAGGTTCGTCTCCGATTCAGATGGCGCTTGACGATGGCGATCAGAGTTTCCTCAAGCAAGCCGCCGATCTGGAGGCTTCCAAGCTCGCTCAATCATCGACCTGA

mRNA sequence

ATGGCGGTGGTTGTAATCGACGGATCGACGGTGAGGAACTTCGTGAACGACGAATCTCACTTCCAGAAGAGCGTTGACGACGCCTTCGCCGCTCTTGATCTCAACAAGGACGGCGTTCTCTCCCGATCCGAGCTCCGTAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACATCGCTACTACGCCGGAGCAACTCACTCAGCTCTACGATTCTATCTTTGAGCAGTTCGATTGTGACAAAAGCGGAACCGTAGATGCGGAAGAGTTTCGGACGGAAATGAAGAACATCTTGCTCGCAATCGCAGATGGATTAGGTTCGTCTCCGATTCAGATGGCGCTTGACGATGGCGATCAGAGTTTCCTCAAGCAAGCCGCCGATCTGGAGGCTTCCAAGCTCGCTCAATCATCGACCTGA

Coding sequence (CDS)

ATGGCGGTGGTTGTAATCGACGGATCGACGGTGAGGAACTTCGTGAACGACGAATCTCACTTCCAGAAGAGCGTTGACGACGCCTTCGCCGCTCTTGATCTCAACAAGGACGGCGTTCTCTCCCGATCCGAGCTCCGTAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACATCGCTACTACGCCGGAGCAACTCACTCAGCTCTACGATTCTATCTTTGAGCAGTTCGATTGTGACAAAAGCGGAACCGTAGATGCGGAAGAGTTTCGGACGGAAATGAAGAACATCTTGCTCGCAATCGCAGATGGATTAGGTTCGTCTCCGATTCAGATGGCGCTTGACGATGGCGATCAGAGTTTCCTCAAGCAAGCCGCCGATCTGGAGGCTTCCAAGCTCGCTCAATCATCGACCTGA

Protein sequence

MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFGVDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSST

Homology

[Close]

BLAST of HG10019457.1 vs. NCBI nr
Match: XP_038905172.1 (uncharacterized protein LOC120091281 [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 135/142 (95.07%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHF+KS+D+AFAALDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSIDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ TTPEQLTQLYDSIFEQFDCDKSGTVDA+EFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVTTTPEQLTQLYDSIFEQFDCDKSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKLAQSST
Sbjct: 121 GDQSFLKQAADLEASKLAQSST 142

[Close]

BLAST of HG10019457.1 vs. NCBI nr
Match: KAE8650949.1 (hypothetical protein Csa_002692 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDESHF KS+DDAFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 64  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 123

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 124 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 183

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKL QSST
Sbjct: 184 GDQSFLKQAADLEASKLRQSST 205

[Close]

BLAST of HG10019457.1 vs. NCBI nr
Match: XP_004153292.1 (uncharacterized protein LOC101213961 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDESHF KS+DDAFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of HG10019457.1 vs. NCBI nr
Match: XP_008461751.1 (PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo] >KAA0052807.1 Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK04161.1 Calcium-binding EF-hand [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+DDAFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of HG10019457.1 vs. NCBI nr
Match: XP_022153410.1 (uncharacterized protein LOC111020923 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 4.1e-66
Identity = 132/142 (92.96%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVV+IDGSTV+NFV+DESHFQKSVD AFAALDLNKDGVLSRSELRKAFETLRLIETH+G
Sbjct: 1   MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFE+FDCDKSGTVDA+EFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLE SKLAQ+ST
Sbjct: 121 GDQSFLKQAADLEVSKLAQAST 142

[Close]

BLAST of HG10019457.1 vs. ExPASy TrEMBL
Match: A0A0A0L9X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDESHF KS+DDAFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of HG10019457.1 vs. ExPASy TrEMBL
Match: A0A5A7UE76 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00320 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.2e-67
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+DDAFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of HG10019457.1 vs. ExPASy TrEMBL
Match: A0A1S3CGR2 (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.2e-67
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+DDAFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of HG10019457.1 vs. ExPASy TrEMBL
Match: A0A6J1J7W5 (uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.0e-66
Identity = 134/141 (95.04%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHF+KSVD+AFAALDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ T PE+LTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 142
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of HG10019457.1 vs. ExPASy TrEMBL
Match: A0A6J1DGS0 (uncharacterized protein LOC111020923 OS=Momordica charantia OX=3673 GN=LOC111020923 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.0e-66
Identity = 132/142 (92.96%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVV+IDGSTV+NFV+DESHFQKSVD AFAALDLNKDGVLSRSELRKAFETLRLIETH+G
Sbjct: 1   MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ATTPEQLTQLYDSIFE+FDCDKSGTVDA+EFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLE SKLAQ+ST
Sbjct: 121 GDQSFLKQAADLEVSKLAQAST 142

[Close]

BLAST of HG10019457.1 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 207.2 bits (526), Expect = 8.6e-54
Identity = 103/142 (72.54%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           M VV+IDGSTVR+FV+DE  F+KSVD+ FAALDLNKDGVLSRSELRKAFE++RL+E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VD+ T  ++LT LYDSIFE+FD D+SG+VD EEFR+EMK I+LAIADGLGS PI M LDD
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
            D +FLK+AADLEASKL ++S+
Sbjct: 121 DDDNFLKKAADLEASKLEKASS 142

[Close]

BLAST of HG10019457.1 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10
Identity = 40/122 (32.79%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           M   VI   T+  F++D   F+   +D F  LDL+K+G+LS SELR+    +  +E+   
Sbjct: 1   MIETVITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESE-- 60

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMAL-D 120
                  ++   +Y++IFE+F  D    +  + FR  +  IL A+A G+G+SP+ M + +
Sbjct: 61  ---VAPGDETDNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 113

Query: 121 DG 122
           DG
Sbjct: 121 DG 113

[Close]

BLAST of HG10019457.1 vs. TAIR 10
Match: AT5G28830.1 (calcium-binding EF hand family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-09
Identity = 34/119 (28.57%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           + V ++DG+ ++ F+ DE  F    ++ F  LD    G L +SE+RKA         H G
Sbjct: 101 IVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL-------VHMG 160

Query: 61  VDIATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALD 120
           V++   P     + D I ++ D D    +   +F   ++ +L  IAD L   PI + L+
Sbjct: 161 VEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212

[Close]

BLAST of HG10019457.1 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08
Identity = 37/118 (31.36%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 5   VIDGSTVRNFVNDESHFQKSVDDAFAALDLNKDGVLSRSELRKAFETLRLIETHFGVDIA 64
           V+DGS +   V +E  F K V+  F  LD ++DG LS +EL+ A      I    G+   
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVAD---IGAALGLPAQ 73

Query: 65  TTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGD 123
            T      +Y  +  +F       V   EF+  + +ILL +A GL   PI +   DG+
Sbjct: 74  GTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGE 128

The following BLAST results are available for this feature:

BLAST of HG10019457.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905172.1	2.2e-67	95.07	uncharacterized protein LOC120091281 [Benincasa hispida]	[more]
KAE8650949.1	2.2e-67	95.07	hypothetical protein Csa_002692 [Cucumis sativus]	[more]
XP_004153292.1	2.2e-67	95.07	uncharacterized protein LOC101213961 [Cucumis sativus]	[more]
XP_008461751.1	1.1e-66	94.37	PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo] >KAA0052807.1 Cal...	[more]
XP_022153410.1	4.1e-66	92.96	uncharacterized protein LOC111020923 [Momordica charantia]	[more]

BLAST of HG10019457.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10019457.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9X6	1.1e-67	95.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1	[more]
A0A5A7UE76	5.2e-67	94.37	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGR2	5.2e-67	94.37	uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=...	[more]
A0A6J1J7W5	2.0e-66	95.04	uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160...	[more]
A0A6J1DGS0	2.0e-66	92.96	uncharacterized protein LOC111020923 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of HG10019457.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	8.6e-54	72.54	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	3.4e-10	32.79	Calcium-binding EF hand family protein	[more]
AT5G28830.1	1.7e-09	28.57	calcium-binding EF hand family protein	[more]
AT4G38810.2	1.1e-08	31.36	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 0.015 score: 24.5 coord: 73..101 e-value: 0.011 score: 24.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 27..98 e-value: 2.9E-10 score: 40.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 11.193852
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 11.110167
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 25..99 e-value: 6.02078E-8 score: 44.8461
None	No IPR available	GENE3D	1.10.238.10		coord: 8..104 e-value: 3.3E-15 score: 58.3
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..139
None	No IPR available	PANTHER	PTHR34574:SF5	CALCIUM-BINDING EF-HAND FAMILY PROTEIN	coord: 1..139
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 15..103

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10019457	HG10019457	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10019457.1-cds	HG10019457.1-cds-Chr04:22028228..22028656	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10019457.1	HG10019457.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding