HG10019431.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019431.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNA damage-repair/toleration protein DRT100-like
Location	Chr04: 21790938 .. 21791432 (-)
Sequence length	495
RNA-Seq Expression	HG10019431.1
Synteny	HG10019431.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAGTCGAGCGCTTCTTAGCCGGAACCAACTCAGCGGATCGATTCCGGCTTCGGTTACGAAAATGTACCGACTGGCGGATTTGGATTTGTCGATGAACGGAATCTCCGGGTTGATCCCGGCGAATATCGGGAACATGCCGGTTCTGTCTACTCTAAATCTTGACAGCAACAGAATCTCGGGACAAATACCTCCAACTCTGATCAGCAATGGCGGACTAGGGATTCTGAATTTGAGCCGAAACGGTCTAGAAGGGCAGATTCCGGACGTTTTCTGCGCGGATTCATACTTCATGGCGCTCGACTTGTCGTTCAATGCTTTGAAAGGTCCGATACCAAATTCATTGTCGTCAGCCAAATACGTTGGGCATTTGGATCTGAGCCATAACCATCTTTGCGGGTCAATACCCATCGGGTCGCCCTTTGATCACCTTGAAGCGTCGTCGTTTACCAACAATGACTGCCTCTGTGGGAACCCGTTAAGGACCTGTTGA

mRNA sequence

ATGCTGAGTCGAGCGCTTCTTAGCCGGAACCAACTCAGCGGATCGATTCCGGCTTCGGTTACGAAAATGTACCGACTGGCGGATTTGGATTTGTCGATGAACGGAATCTCCGGGTTGATCCCGGCGAATATCGGGAACATGCCGGTTCTGTCTACTCTAAATCTTGACAGCAACAGAATCTCGGGACAAATACCTCCAACTCTGATCAGCAATGGCGGACTAGGGATTCTGAATTTGAGCCGAAACGGTCTAGAAGGGCAGATTCCGGACGTTTTCTGCGCGGATTCATACTTCATGGCGCTCGACTTGTCGTTCAATGCTTTGAAAGGTCCGATACCAAATTCATTGTCGTCAGCCAAATACGTTGGGCATTTGGATCTGAGCCATAACCATCTTTGCGGGTCAATACCCATCGGGTCGCCCTTTGATCACCTTGAAGCGTCGTCGTTTACCAACAATGACTGCCTCTGTGGGAACCCGTTAAGGACCTGTTGA

Coding sequence (CDS)

ATGCTGAGTCGAGCGCTTCTTAGCCGGAACCAACTCAGCGGATCGATTCCGGCTTCGGTTACGAAAATGTACCGACTGGCGGATTTGGATTTGTCGATGAACGGAATCTCCGGGTTGATCCCGGCGAATATCGGGAACATGCCGGTTCTGTCTACTCTAAATCTTGACAGCAACAGAATCTCGGGACAAATACCTCCAACTCTGATCAGCAATGGCGGACTAGGGATTCTGAATTTGAGCCGAAACGGTCTAGAAGGGCAGATTCCGGACGTTTTCTGCGCGGATTCATACTTCATGGCGCTCGACTTGTCGTTCAATGCTTTGAAAGGTCCGATACCAAATTCATTGTCGTCAGCCAAATACGTTGGGCATTTGGATCTGAGCCATAACCATCTTTGCGGGTCAATACCCATCGGGTCGCCCTTTGATCACCTTGAAGCGTCGTCGTTTACCAACAATGACTGCCTCTGTGGGAACCCGTTAAGGACCTGTTGA

Protein sequence

MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAKYVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC

Homology

[Close]

BLAST of HG10019431.1 vs. NCBI nr
Match: XP_038906345.1 (DNA damage-repair/toleration protein DRT100-like [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 159/164 (96.95%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALLSRNQLSGSIPASVT+M RLADLDLSMNGISG IP NIGNMPVLSTLNLDSNRI
Sbjct: 202 MLSRALLSRNQLSGSIPASVTRMARLADLDLSMNGISGFIPVNIGNMPVLSTLNLDSNRI 261

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFC DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 262 SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCPDSYFMALDLSFNALKGPIPNSLSSAK 321

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 322 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 365

[Close]

BLAST of HG10019431.1 vs. NCBI nr
Match: XP_022998435.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita maxima])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 155/164 (94.51%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALL RNQ++G+IP+SVTKMYRLADLDLSMNGISG+IP NIGNMPVLSTLNLDSNRI
Sbjct: 235 MLSRALLGRNQITGAIPSSVTKMYRLADLDLSMNGISGIIPENIGNMPVLSTLNLDSNRI 294

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRN LEG IPDVFCADSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 295 SGQIPPTLISNGGLGILNLSRNALEGHIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 354

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 355 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 398

[Close]

BLAST of HG10019431.1 vs. NCBI nr
Match: XP_022152551.1 (DNA damage-repair/toleration protein DRT100-like [Momordica charantia])

HSP 1 Score: 318.9 bits (816), Expect = 2.5e-83
Identity = 155/164 (94.51%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALLSRNQL+G IPAS+TKMYRLADLDLSMNGISG IPAN+GNMPVLSTLNLDSNRI
Sbjct: 201 MLSRALLSRNQLTGEIPASITKMYRLADLDLSMNGISGYIPANLGNMPVLSTLNLDSNRI 260

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRN LEG IPDVFC DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 261 SGQIPPTLISNGGLGILNLSRNTLEGHIPDVFCPDSYFMALDLSFNALKGPIPNSLSSAK 320

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGH+DLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 321 YVGHMDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 364

[Close]

BLAST of HG10019431.1 vs. NCBI nr
Match: KAG6606870.1 (DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036576.1 DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.2 bits (814), Expect = 4.3e-83
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALL RNQ++G+IP+SVTKMYRLADLDLSMNGISG+IP NIGNMPVLSTLNLDSNRI
Sbjct: 199 MLSRALLGRNQITGAIPSSVTKMYRLADLDLSMNGISGIIPENIGNMPVLSTLNLDSNRI 258

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRN LEG IPDVFC DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 259 SGQIPPTLISNGGLGILNLSRNALEGHIPDVFCTDSYFMALDLSFNALKGPIPNSLSSAK 318

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 319 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 362

[Close]

BLAST of HG10019431.1 vs. NCBI nr
Match: XP_023525975.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 4.3e-83
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALL RNQ++G+IP+SVTKMYRLADLDLSMNGISG+IP NIGNMPVLSTLNLDSNRI
Sbjct: 199 MLSRALLGRNQITGAIPSSVTKMYRLADLDLSMNGISGIIPENIGNMPVLSTLNLDSNRI 258

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRN LEG IPDVFC DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 259 SGQIPPTLISNGGLGILNLSRNALEGHIPDVFCTDSYFMALDLSFNALKGPIPNSLSSAK 318

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 319 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 362

[Close]

BLAST of HG10019431.1 vs. ExPASy Swiss-Prot
Match: Q00874 (DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=DRT100 PE=2 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 2.3e-55
Identity = 107/163 (65.64%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSR LL RN+L+GSIP S++ M RLADLDLS N I G IP  +GNM VLS LNLD N +
Sbjct: 208 MLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSL 267

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           +G IP +L+SN GL + NLSRN LEG IPDVF + +Y ++LDLS N+L G IP+SLSSAK
Sbjct: 268 TGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAK 327

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRT 164
           +VGHLD+SHN LCG IP G PFDHLEA+SF++N CLCG PL T
Sbjct: 328 FVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPLTT 370

[Close]

BLAST of HG10019431.1 vs. ExPASy Swiss-Prot
Match: Q9LY03 (Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana OX=3702 GN=IRK PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.0e-23
Identity = 58/152 (38.16%), Postives = 87/152 (57.24%), Query Frame = 0


Query: 7   LSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRISGQIPP 66
           LSRN L+G IP+++ ++  L+ LD+S N ++G+IP   G    L  L L++N + G IP 
Sbjct: 407 LSRNSLTGPIPSTIGELKHLSVLDVSHNQLNGMIPRETGGAVSLEELRLENNLLEGNIPS 466

Query: 67  TLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAKYVGHLD 126
           ++ +   L  L LS N L G IP      +    +DLSFN L G +P  L++  Y+   +
Sbjct: 467 SIKNCSSLRSLILSHNKLLGSIPPELAKLTRLEEVDLSFNELAGTLPKQLANLGYLHTFN 526

Query: 127 LSHNHLCGSIPIGSPFDHLEASSFTNNDCLCG 159
           +SHNHL G +P G  F+ L  SS + N  +CG
Sbjct: 527 ISHNHLFGELPAGGIFNGLSPSSVSGNPGICG 558

[Close]

BLAST of HG10019431.1 vs. ExPASy Swiss-Prot
Match: Q5Z9N5 (Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.7e-23
Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 0


Query: 6   LLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRISGQIP 65
           LL  N + G IP ++  +  L  L L  N  SG +P  IGN+  LS LN+  N ++G IP
Sbjct: 466 LLGNNGIGGRIPPAIGNLPALQTLSLESNNFSGALPPEIGNLKNLSRLNVSGNALTGAIP 525

Query: 66  PTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAKYVGHL 125
             LI    L  ++LSRNG  G+IP+   +      L++S N L G +P  +S+   +  L
Sbjct: 526 DELIRCASLAAVDLSRNGFSGEIPESITSLKILCTLNVSRNRLTGELPPEMSNMTSLTTL 585

Query: 126 DLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPL 162
           D+S+N L G +P+   F     SSF  N  LCG P+
Sbjct: 586 DVSYNSLSGPVPMQGQFLVFNESSFVGNPGLCGGPV 621

[Close]

BLAST of HG10019431.1 vs. ExPASy Swiss-Prot
Match: P35334 (Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris OX=3885 GN=PGIP1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-22
Identity = 63/181 (34.81%), Postives = 93/181 (51.38%), Query Frame = 0


Query: 8   SRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLST-LNLDSNRISGQIPP 67
           S N LSG++P S++ +  L  +    N ISG IP + G+   L T + +  NR++G+IPP
Sbjct: 162 SYNALSGTLPPSISSLPNLGGITFDGNRISGAIPDSYGSFSKLFTAMTISRNRLTGKIPP 221

Query: 68  TLISNGGLGILNLSRNGLEGQIPDVFCAD-----------------------SYFMALDL 127
           T  +N  L  ++LSRN LEG    +F +D                            LDL
Sbjct: 222 T-FANLNLAFVDLSRNMLEGDASVLFGSDKNTKKIHLAKNSLAFDLGKVGLSKNLNGLDL 281

Query: 128 SFNALKGPIPNSLSSAKYVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRT 165
             N + G +P  L+  K++  L++S N+LCG IP G      + SS+ NN CLCG+PL +
Sbjct: 282 RNNRIYGTLPQGLTQLKFLQSLNVSFNNLCGEIPQGGNLKRFDVSSYANNKCLCGSPLPS 341

[Close]

BLAST of HG10019431.1 vs. ExPASy Swiss-Prot
Match: Q9FIZ3 (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana OX=3702 GN=GSO2 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.3e-22
Identity = 64/187 (34.22%), Postives = 93/187 (49.73%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           +L    LS N+  GS+P  +  +  +  L L  N ++G IP  IGN+  L+ LNL+ N++
Sbjct: 673 LLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQL 732

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIP-DVFCADSYFMALDLSFNALKGPIPNSLSSA 120
           SG +P T+     L  L LSRN L G+IP ++        ALDLS+N   G IP+++S+ 
Sbjct: 733 SGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTL 792

Query: 121 KYVGHLDLSHNHLCGSIP----------------------IGSPFDHLEASSFTNNDCLC 165
             +  LDLSHN L G +P                      +   F   +A +F  N  LC
Sbjct: 793 PKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKKQFSRWQADAFVGNAGLC 852

[Close]

BLAST of HG10019431.1 vs. ExPASy TrEMBL
Match: A0A6J1KCI1 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=LOC111493071 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.1e-84
Identity = 155/164 (94.51%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALL RNQ++G+IP+SVTKMYRLADLDLSMNGISG+IP NIGNMPVLSTLNLDSNRI
Sbjct: 235 MLSRALLGRNQITGAIPSSVTKMYRLADLDLSMNGISGIIPENIGNMPVLSTLNLDSNRI 294

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRN LEG IPDVFCADSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 295 SGQIPPTLISNGGLGILNLSRNALEGHIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 354

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 355 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 398

[Close]

BLAST of HG10019431.1 vs. ExPASy TrEMBL
Match: A0A6J1DI25 (DNA damage-repair/toleration protein DRT100-like OS=Momordica charantia OX=3673 GN=LOC111020249 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 155/164 (94.51%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALLSRNQL+G IPAS+TKMYRLADLDLSMNGISG IPAN+GNMPVLSTLNLDSNRI
Sbjct: 201 MLSRALLSRNQLTGEIPASITKMYRLADLDLSMNGISGYIPANLGNMPVLSTLNLDSNRI 260

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRN LEG IPDVFC DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 261 SGQIPPTLISNGGLGILNLSRNTLEGHIPDVFCPDSYFMALDLSFNALKGPIPNSLSSAK 320

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGH+DLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 321 YVGHMDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 364

[Close]

BLAST of HG10019431.1 vs. ExPASy TrEMBL
Match: A0A6J1GCB0 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 GN=LOC111452846 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.1e-83
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALL RNQ++G+IP+SVTKMYRLADLDLSMNGISG+IP NIGNMPVLSTLNLDSNRI
Sbjct: 199 MLSRALLGRNQITGAIPSSVTKMYRLADLDLSMNGISGIIPENIGNMPVLSTLNLDSNRI 258

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTLISNGGLGILNLSRN LEG IPDVFC DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 259 SGQIPPTLISNGGLGILNLSRNALEGHIPDVFCTDSYFMALDLSFNALKGPIPNSLSSAK 318

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 319 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 362

[Close]

BLAST of HG10019431.1 vs. ExPASy TrEMBL
Match: A0A5A7TYV5 (DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00370 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 153/164 (93.29%), Postives = 158/164 (96.34%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALL RNQL+GSIP SVTKMYRLADLDLSMNGISGLIPAN+GNMPVLSTLNLDSNR+
Sbjct: 200 MLSRALLGRNQLTGSIPDSVTKMYRLADLDLSMNGISGLIPANMGNMPVLSTLNLDSNRL 259

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTL++N GLGILNLSRNGLEGQIPDVF  DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 260 SGQIPPTLLNNDGLGILNLSRNGLEGQIPDVFHPDSYFMALDLSFNALKGPIPNSLSSAK 319

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIP GSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 320 YVGHLDLSHNHLCGSIPNGSPFDHLEASSFTNNDCLCGNPLRTC 363

[Close]

BLAST of HG10019431.1 vs. ExPASy TrEMBL
Match: A0A1S4E3F2 (DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC103500307 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 153/164 (93.29%), Postives = 158/164 (96.34%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALL RNQL+GSIP SVTKMYRLADLDLSMNGISGLIPAN+GNMPVLSTLNLDSNR+
Sbjct: 200 MLSRALLGRNQLTGSIPDSVTKMYRLADLDLSMNGISGLIPANMGNMPVLSTLNLDSNRL 259

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SGQIPPTL++N GLGILNLSRNGLEGQIPDVF  DSYFMALDLSFNALKGPIPNSLSSAK
Sbjct: 260 SGQIPPTLLNNDGLGILNLSRNGLEGQIPDVFHPDSYFMALDLSFNALKGPIPNSLSSAK 319

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           YVGHLDLSHNHLCGSIP GSPFDHLEASSFTNNDCLCGNPLRTC
Sbjct: 320 YVGHLDLSHNHLCGSIPNGSPFDHLEASSFTNNDCLCGNPLRTC 363

[Close]

BLAST of HG10019431.1 vs. TAIR 10
Match: AT3G20820.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 218.4 bits (555), Expect = 4.3e-57
Identity = 106/164 (64.63%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSRALLS N+++G IP S+T +YRLAD+DLS N + G IP ++G M VL+TLNLD N+I
Sbjct: 200 MLSRALLSGNRITGRIPESLTNIYRLADVDLSGNQLYGTIPPSLGRMSVLATLNLDGNKI 259

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SG+IP TL+++  +  LNLSRN L+G+IP+ F   SYF  LDLS+N LKGPIP S+S A 
Sbjct: 260 SGEIPQTLMTSSVMN-LNLSRNLLQGKIPEGFGPRSYFTVLDLSYNNLKGPIPRSISGAS 319

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           ++GHLDLSHNHLCG IP+GSPFDHLEA+SF  NDCLCG PLR C
Sbjct: 320 FIGHLDLSHNHLCGRIPVGSPFDHLEAASFMFNDCLCGKPLRAC 362

[Close]

BLAST of HG10019431.1 vs. TAIR 10
Match: AT3G12610.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.6e-56
Identity = 107/163 (65.64%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           MLSR LL RN+L+GSIP S++ M RLADLDLS N I G IP  +GNM VLS LNLD N +
Sbjct: 208 MLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSL 267

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           +G IP +L+SN GL + NLSRN LEG IPDVF + +Y ++LDLS N+L G IP+SLSSAK
Sbjct: 268 TGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAK 327

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRT 164
           +VGHLD+SHN LCG IP G PFDHLEA+SF++N CLCG PL T
Sbjct: 328 FVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPLTT 370

[Close]

BLAST of HG10019431.1 vs. TAIR 10
Match: AT5G12940.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-51
Identity = 97/164 (59.15%), Postives = 126/164 (76.83%), Query Frame = 0


Query: 1   MLSRALLSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRI 60
           M+SR LLS N++SG IP S+T++YRLADL+LSMN ++G IPA+ G M VL+TLNLD N I
Sbjct: 207 MVSRVLLSGNKISGQIPDSLTRIYRLADLELSMNRLTGPIPASFGKMSVLATLNLDGNLI 266

Query: 61  SGQIPPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAK 120
           SG IP +L+++  +  LNLS N + G IP+ F   SYF  LDL+ N L+GPIP S+++A 
Sbjct: 267 SGMIPGSLLAS-SISNLNLSGNLITGSIPNTFGPRSYFTVLDLANNRLQGPIPASITAAS 326

Query: 121 YVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
           ++GHLD+SHNHLCG IP+GSPFDHL+A+SF  N CLCG PL  C
Sbjct: 327 FIGHLDVSHNHLCGKIPMGSPFDHLDATSFAYNACLCGKPLGNC 369

[Close]

BLAST of HG10019431.1 vs. TAIR 10
Match: AT5G23400.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 7   LSRNQLSGSIPASVTKMYR--LADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRISGQI 66
           LS N ++GS+ + +       L ++ L+ N ISG IP + G    L  LN+ SN+ISGQI
Sbjct: 426 LSSNLVTGSLSSLINNKTSSFLEEIHLTNNQISGRIP-DFGESLNLKVLNIGSNKISGQI 485

Query: 67  PPTLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAKYVGH 126
           P ++ +   L  L++SRN + G IP      +    LDLS NAL G IP+SL + K + H
Sbjct: 486 PSSISNLVELVRLDISRNHITGGIPQAIGQLAQLKWLDLSINALTGRIPDSLLNIKTIKH 545

Query: 127 LDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNPLRTC 165
                N LCG IP G PF+   A+++ +N CLCG PL  C
Sbjct: 546 ASFRANRLCGQIPQGRPFNIFPAAAYLHNLCLCGKPLPAC 584

[Close]

BLAST of HG10019431.1 vs. TAIR 10
Match: AT3G56370.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24
Identity = 58/152 (38.16%), Postives = 87/152 (57.24%), Query Frame = 0


Query: 7   LSRNQLSGSIPASVTKMYRLADLDLSMNGISGLIPANIGNMPVLSTLNLDSNRISGQIPP 66
           LSRN L+G IP+++ ++  L+ LD+S N ++G+IP   G    L  L L++N + G IP 
Sbjct: 407 LSRNSLTGPIPSTIGELKHLSVLDVSHNQLNGMIPRETGGAVSLEELRLENNLLEGNIPS 466

Query: 67  TLISNGGLGILNLSRNGLEGQIPDVFCADSYFMALDLSFNALKGPIPNSLSSAKYVGHLD 126
           ++ +   L  L LS N L G IP      +    +DLSFN L G +P  L++  Y+   +
Sbjct: 467 SIKNCSSLRSLILSHNKLLGSIPPELAKLTRLEEVDLSFNELAGTLPKQLANLGYLHTFN 526

Query: 127 LSHNHLCGSIPIGSPFDHLEASSFTNNDCLCG 159
           +SHNHL G +P G  F+ L  SS + N  +CG
Sbjct: 527 ISHNHLFGELPAGGIFNGLSPSSVSGNPGICG 558

The following BLAST results are available for this feature:

BLAST of HG10019431.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906345.1	1.7e-84	96.95	DNA damage-repair/toleration protein DRT100-like [Benincasa hispida]	[more]
XP_022998435.1	1.5e-83	94.51	DNA damage-repair/toleration protein DRT100-like [Cucurbita maxima]	[more]
XP_022152551.1	2.5e-83	94.51	DNA damage-repair/toleration protein DRT100-like [Momordica charantia]	[more]
KAG6606870.1	4.3e-83	93.90	DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023525975.1	4.3e-83	93.90	DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10019431.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00874	2.3e-55	65.64	DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=D...	[more]
Q9LY03	4.0e-23	38.16	Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis th...	[more]
Q5Z9N5	6.7e-23	37.18	Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza s...	[more]
P35334	2.0e-22	34.81	Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris OX=3885 GN=PGIP1 PE=1 SV=1	[more]
Q9FIZ3	3.3e-22	34.22	LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana O...	[more]

BLAST of HG10019431.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCI1	7.1e-84	94.51	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1DI25	1.2e-83	94.51	DNA damage-repair/toleration protein DRT100-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1GCB0	2.1e-83	93.90	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A5A7TYV5	1.9e-81	93.29	DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. ma...	[more]
A0A1S4E3F2	1.9e-81	93.29	DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of HG10019431.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20820.1	4.3e-57	64.63	Leucine-rich repeat (LRR) family protein	[more]
AT3G12610.1	1.6e-56	65.64	Leucine-rich repeat (LRR) family protein	[more]
AT5G12940.1	1.6e-51	59.15	Leucine-rich repeat (LRR) family protein	[more]
AT5G23400.1	2.1e-24	40.63	Leucine-rich repeat (LRR) family protein	[more]
AT3G56370.1	2.8e-24	38.16	Leucine-rich repeat protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..164 e-value: 5.4E-46 score: 158.9
None	No IPR available	PANTHER	PTHR48060	DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100	coord: 1..164
None	No IPR available	PANTHER	PTHR48060:SF10	DNA-DAMAGE-REPAIR/TOLERATION DRT100-LIKE PROTEIN	coord: 1..164
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 6..160

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10019431	HG10019431	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10019431.1-cds	HG10019431.1-cds-Chr04:21790938..21791432	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10019431.1	HG10019431.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane