HG10019374.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019374.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	S-acyltransferase
Location	Chr04: 21055631 .. 21056023 (-)
Sequence length	393
RNA-Seq Expression	HG10019374.1
Synteny	HG10019374.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTATACTCAGTTCTGCACATGTGGCCACCATTATCAGTCCACGAGTTGGGTCACCTAAATGGTTCTGGAAGCAGGTTCGGTTGGAGTCTTTCAAAGGAAATTGTTCGTGCTGTTCTGAGCTCCACAACTCTACTGTCTATCAAAGGGTTCATCCTTATTTATCTCTTTATCTCAAGTTTCTCAGTTCAAATTGGATTGATCGTACTTCTGTGCCAACAACTATGGTATATCTACGAGGGGAAAACTTATTTGAGTCACTTGAGTTCACAAGGTGATGATGGAGAGAAGGATTGCCAAAATCTTCTCCGCTTCTTTGGCTGTCCATCGGTTTCTTTCTCTCGACATTTGCCAATTTTTCGAAGCTCAAGAAAAAGACACGAGAAGTGA

mRNA sequence

ATGGCTGTATACTCAGTTCTGCACATGTGGCCACCATTATCAGTCCACGAGTTGGGTCACCTAAATGGTTCTGGAAGCAGGTTCGGTTGGAGTCTTTCAAAGGAAATTGTTCGTGCTGTTCTGAGCTCCACAACTCTACTGTCTATCAAAGGGTTCATCCTTATTTATCTCTTTATCTCAAGTTTCTCAGTTCAAATTGGATTGATCGTACTTCTGTGCCAACAACTATGGTATATCTACGAGGGGAAAACTTATTTGAGTCACTTGAGTTCACAAGGTGATGATGGAGAGAAGGATTGCCAAAATCTTCTCCGCTTCTTTGGCTGTCCATCGGTTTCTTTCTCTCGACATTTGCCAATTTTTCGAAGCTCAAGAAAAAGACACGAGAAGTGA

Coding sequence (CDS)

ATGGCTGTATACTCAGTTCTGCACATGTGGCCACCATTATCAGTCCACGAGTTGGGTCACCTAAATGGTTCTGGAAGCAGGTTCGGTTGGAGTCTTTCAAAGGAAATTGTTCGTGCTGTTCTGAGCTCCACAACTCTACTGTCTATCAAAGGGTTCATCCTTATTTATCTCTTTATCTCAAGTTTCTCAGTTCAAATTGGATTGATCGTACTTCTGTGCCAACAACTATGGTATATCTACGAGGGGAAAACTTATTTGAGTCACTTGAGTTCACAAGGTGATGATGGAGAGAAGGATTGCCAAAATCTTCTCCGCTTCTTTGGCTGTCCATCGGTTTCTTTCTCTCGACATTTGCCAATTTTTCGAAGCTCAAGAAAAAGACACGAGAAGTGA

Protein sequence

MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFISSFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPIFRSSRKRHEK

Homology

[Close]

BLAST of HG10019374.1 vs. NCBI nr
Match: XP_038906260.1 (protein S-acyltransferase 11 [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 9.6e-62
Identity = 120/130 (92.31%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYSVLHMWPPLS H+LG LNGSGSRFGW+LSKEI  AVLSSTTLLSI+GFILIYLFIS
Sbjct: 224 MAVYSVLHMWPPLSFHDLGRLNGSGSRFGWNLSKEIFHAVLSSTTLLSIRGFILIYLFIS 283

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSV+FSRH PI
Sbjct: 284 SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVAFSRHFPI 343

Query: 121 FRSSRKRHEK 131
           FR+SRKRHEK
Sbjct: 344 FRTSRKRHEK 353

[Close]

BLAST of HG10019374.1 vs. NCBI nr
Match: XP_022983607.1 (protein S-acyltransferase 11 isoform X1 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 8.1e-61
Identity = 117/130 (90.00%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSK+I+ AVL STTLLSI+GFILIYLFIS
Sbjct: 212 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKDIIHAVLRSTTLLSIRGFILIYLFIS 271

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGLIVLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI
Sbjct: 272 SFSLQIGLIVLLCQQLWYIYEGKTYLSHVSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 331

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 332 FRSSKKRHEK 341

[Close]

BLAST of HG10019374.1 vs. NCBI nr
Match: XP_022983608.1 (protein S-acyltransferase 11 isoform X2 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 8.1e-61
Identity = 117/130 (90.00%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSK+I+ AVL STTLLSI+GFILIYLFIS
Sbjct: 206 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKDIIHAVLRSTTLLSIRGFILIYLFIS 265

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGLIVLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI
Sbjct: 266 SFSLQIGLIVLLCQQLWYIYEGKTYLSHVSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 325

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 326 FRSSKKRHEK 335

[Close]

BLAST of HG10019374.1 vs. NCBI nr
Match: XP_023526035.1 (protein S-acyltransferase 11 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 117/130 (90.00%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSKEI+ AVL STTLLSI+GFILIYLFIS
Sbjct: 212 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKEIIHAVLRSTTLLSIRGFILIYLFIS 271

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGL VLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI
Sbjct: 272 SFSLQIGLAVLLCQQLWYIYEGKTYLSHISSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 331

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 332 FRSSKKRHEK 341

[Close]

BLAST of HG10019374.1 vs. NCBI nr
Match: XP_023526036.1 (protein S-acyltransferase 11 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 117/130 (90.00%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSKEI+ AVL STTLLSI+GFILIYLFIS
Sbjct: 206 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKEIIHAVLRSTTLLSIRGFILIYLFIS 265

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGL VLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI
Sbjct: 266 SFSLQIGLAVLLCQQLWYIYEGKTYLSHISSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 325

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 326 FRSSKKRHEK 335

[Close]

BLAST of HG10019374.1 vs. ExPASy Swiss-Prot
Match: Q9LIH7 (Protein S-acyltransferase 11 OS=Arabidopsis thaliana OX=3702 GN=PAT11 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.1e-27
Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLS-----VHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILI 60
           M VY+++H+ PP+        ++ H+    S     + K I    +++   +S++  +L+
Sbjct: 210 MCVYTLIHILPPIEKGAAYASDVAHVAHGNSISILRVVKNICLTYIANAVFISVRSLVLV 269

Query: 61  YLFISSFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQG--DDGEKDCQNLLRFFGCPSVS 120
           YLF++S SV IGL VLL QQL YIYEGKTYLSHLSSQG  +DGEK C+NLL FFGCP  S
Sbjct: 270 YLFVASVSVAIGLSVLLWQQLSYIYEGKTYLSHLSSQGTEEDGEKSCRNLLTFFGCPH-S 329

Query: 121 FSRHLPIFRSSRKRHE 130
             RHLP  R+ RKRH+
Sbjct: 330 IERHLPTIRNLRKRHK 344

[Close]

BLAST of HG10019374.1 vs. ExPASy TrEMBL
Match: A0A6J1IZU8 (S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111482163 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.9e-61
Identity = 117/130 (90.00%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSK+I+ AVL STTLLSI+GFILIYLFIS
Sbjct: 212 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKDIIHAVLRSTTLLSIRGFILIYLFIS 271

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGLIVLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI
Sbjct: 272 SFSLQIGLIVLLCQQLWYIYEGKTYLSHVSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 331

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 332 FRSSKKRHEK 341

[Close]

BLAST of HG10019374.1 vs. ExPASy TrEMBL
Match: A0A6J1J871 (S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111482163 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.9e-61
Identity = 117/130 (90.00%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSK+I+ AVL STTLLSI+GFILIYLFIS
Sbjct: 206 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKDIIHAVLRSTTLLSIRGFILIYLFIS 265

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGLIVLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI
Sbjct: 266 SFSLQIGLIVLLCQQLWYIYEGKTYLSHVSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 325

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 326 FRSSKKRHEK 335

[Close]

BLAST of HG10019374.1 vs. ExPASy TrEMBL
Match: A0A6J1F8T5 (S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111441876 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 116/130 (89.23%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSKEI+ AVL STTLLSI+GFILIYLFIS
Sbjct: 206 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKEIIHAVLRSTTLLSIRGFILIYLFIS 265

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGL VLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCP VSFSRHLPI
Sbjct: 266 SFSLQIGLAVLLCQQLWYIYEGKTYLSHISSQGDDGEKDCQNLLRFFGCPLVSFSRHLPI 325

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 326 FRSSKKRHEK 335

[Close]

BLAST of HG10019374.1 vs. ExPASy TrEMBL
Match: A0A6J1F3V1 (S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111441876 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 116/130 (89.23%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYS+ H+WPPLSVHELG LNGSGS+FGWSLSKEI+ AVL STTLLSI+GFILIYLFIS
Sbjct: 212 MAVYSLWHIWPPLSVHELGRLNGSGSKFGWSLSKEIIHAVLRSTTLLSIRGFILIYLFIS 271

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFS+QIGL VLLCQQLWYIYEGKTYLSH+SSQGDDGEKDCQNLLRFFGCP VSFSRHLPI
Sbjct: 272 SFSLQIGLAVLLCQQLWYIYEGKTYLSHISSQGDDGEKDCQNLLRFFGCPLVSFSRHLPI 331

Query: 121 FRSSRKRHEK 131
           FRSS+KRHEK
Sbjct: 332 FRSSKKRHEK 341

[Close]

BLAST of HG10019374.1 vs. ExPASy TrEMBL
Match: A0A6J1DIB0 (S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111020738 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.1e-58
Identity = 109/130 (83.85%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLSVHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILIYLFIS 60
           MAVYSVLHMWPPL+ HELG LNG G++FGW+LSKEI+ AV+ STTLLS++GFILIYLFIS
Sbjct: 226 MAVYSVLHMWPPLTFHELGRLNGFGTKFGWNLSKEIIHAVVRSTTLLSVRGFILIYLFIS 285

Query: 61  SFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDGEKDCQNLLRFFGCPSVSFSRHLPI 120
           SFSVQIGL+VLLCQQLWYIYEGKTYLSH+SSQGDDG++DC+NLLRFFGCPS++FSRHLPI
Sbjct: 286 SFSVQIGLMVLLCQQLWYIYEGKTYLSHISSQGDDGDRDCRNLLRFFGCPSITFSRHLPI 345

Query: 121 FRSSRKRHEK 131
           FRSSRKRH K
Sbjct: 346 FRSSRKRHVK 355

[Close]

BLAST of HG10019374.1 vs. TAIR 10
Match: AT3G18620.1 (DHHC-type zinc finger family protein )

HSP 1 Score: 121.7 bits (304), Expect = 4.3e-28
Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 1   MAVYSVLHMWPPLS-----VHELGHLNGSGSRFGWSLSKEIVRAVLSSTTLLSIKGFILI 60
           M VY+++H+ PP+        ++ H+    S     + K I    +++   +S++  +L+
Sbjct: 210 MCVYTLIHILPPIEKGAAYASDVAHVAHGNSISILRVVKNICLTYIANAVFISVRSLVLV 269

Query: 61  YLFISSFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQG--DDGEKDCQNLLRFFGCPSVS 120
           YLF++S SV IGL VLL QQL YIYEGKTYLSHLSSQG  +DGEK C+NLL FFGCP  S
Sbjct: 270 YLFVASVSVAIGLSVLLWQQLSYIYEGKTYLSHLSSQGTEEDGEKSCRNLLTFFGCPH-S 329

Query: 121 FSRHLPIFRSSRKRHE 130
             RHLP  R+ RKRH+
Sbjct: 330 IERHLPTIRNLRKRHK 344

The following BLAST results are available for this feature:

BLAST of HG10019374.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906260.1	9.6e-62	92.31	protein S-acyltransferase 11 [Benincasa hispida]	[more]
XP_022983607.1	8.1e-61	90.00	protein S-acyltransferase 11 isoform X1 [Cucurbita maxima]	[more]
XP_022983608.1	8.1e-61	90.00	protein S-acyltransferase 11 isoform X2 [Cucurbita maxima]	[more]
XP_023526035.1	1.1e-60	90.00	protein S-acyltransferase 11 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023526036.1	1.1e-60	90.00	protein S-acyltransferase 11 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10019374.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIH7	6.1e-27	48.53	Protein S-acyltransferase 11 OS=Arabidopsis thaliana OX=3702 GN=PAT11 PE=2 SV=1	[more]

BLAST of HG10019374.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZU8	3.9e-61	90.00	S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111482163 PE=3 SV=1	[more]
A0A6J1J871	3.9e-61	90.00	S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111482163 PE=3 SV=1	[more]
A0A6J1F8T5	2.5e-60	89.23	S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111441876 PE=3 SV=1	[more]
A0A6J1F3V1	2.5e-60	89.23	S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111441876 PE=3 SV=1	[more]
A0A6J1DIB0	3.1e-58	83.85	S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111020738 PE=3 SV=1	[more]

BLAST of HG10019374.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18620.1	4.3e-28	48.53	DHHC-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22883	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	coord: 3..130
None	No IPR available	PANTHER	PTHR22883:SF353	S-ACYLTRANSFERASE	coord: 3..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10019374	HG10019374	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10019374.1-cds	HG10019374.1-cds-Chr04:21055631..21056023	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10019374.1	HG10019374.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018230	peptidyl-L-cysteine S-palmitoylation
biological_process	GO:0006612	protein targeting to membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019706	protein-cysteine S-palmitoyltransferase activity