HG10019357.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019357.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein, putative
Location	Chr04: 20796651 .. 20797834 (+)
Sequence length	1128
RNA-Seq Expression	HG10019357.1
Synteny	HG10019357.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTATATCCTAGGTAGAGGCCGCAAGTTTGAAAAAATTTGGGATGTTTTGGTTGATATTAAGCTTAAGGATCGGTCGTTAATCTCGCCGCGAACTGTCATGGTTGTTTTAGGAAGAATTGCCAAAGTGTGTTCTGTGAGGCAGACTGTAGAGTCTTTTAGGAAGTTCAAGAAGTTTGTTCCTGAGTTTGATGTCACTTGCTTTAATGCATTGTTGAGAACTCTGTGCCAGGAGAAGAGTATGATGGATGCGAGGAATGTTTACCACGGCATGAAGAGTAAGTTTAGGCCAAATTTGCAGACGTTTTACATATTATTGTCGGGTTGGAAGTCATCGGAAGAAGCTGAGGGATTCTTTGATGAGATGAGAGAAATGAGGGTTTAAACCGATGTTGTTTCATATAATTGTTTGGTTGATGTTTATTGTAAAAATAGGGAAATGGACAAGGCGTTAATGTGTTTGAGAAAATGAGGGAAGAGGATATACCTGCTGATGTGATTACGTACACCAGTATTATTGGGGGATTGGGATTGATTGGTCAACCCGACAAAGCGAGAAGTATTTTGAAAGAGATGAAGGAGTATGGATGTTACCCTGATGTTCCAGCTTATAATGCTGCAATACGAAATTATTGCATTGCGAAGAGGCTTCGTGAGGCTTTTGATTTGATGGATGAAATGGTGAATAAGGGTCTGAATCCAAAGCAACGCATTAACTTGTTCTTTAGGATTTTCTTCTGGTCCAATGACTTGCAAAGCTCGTGGAATTTATATCGTCGAATGATGGATACTGGGTGCTTGCCTAATACGCAATCCTGCTTGTTCCTAATGAGGTTGTTTAAGAAGCACGAAAAAGTAGACATTGCACTGGAGCTGTGGAATGACATGATACAAAGGGGTTTTGGGTCTTATATATTAGTATCCGAGGAGTTATTTGATCTTCTTTGTGATTTGGAAAGATTAGAAGCTGAGAGCTTTTTTCTAGAGATGGTAGATAAGGGGCATAAGCCTAGTAACGTCTCGTTTAAAAGGATCAAAGTACTCATGGAACTGGTAAATAAGCATGAGGCTCTTCAGAACTTGTCAAAGAAAATGGATGGTTTTTTGGATCCACAAAAACGCCTTCCTGAAACGATGAGTTATTCAGTAGATCTGTCAAATTTGAATTCATTTCCATGTTAA

mRNA sequence

ATGCTTTATATCCTAGGTAGAGGCCGCAAGTTTGAAAAAATTTGGGATGTTTTGGTTGATATTAAGCTTAAGGATCGGTCGTTAATCTCGCCGCGAACTGTCATGGTTGTTTTAGGAAGAATTGCCAAAGTGTGTTCTGTGAGGCAGACTGTAGAGTCTTTTAGGAAGTTCAAGAAGTTTGTTCCTGAGTTTGATGTCACTTGCTTTAATGCATTGTTGAGAACTCTGTGCCAGGAGAAGAGTATGATGGATGCGAGGAATGTTTACCACGGCATGAAGAGTAAGTTTAGGCCAAATTTGCAGACGTTTTACATATTATTGTCGGGTTGGAAGTCATCGGAAGAAGCTGAGGGATTCTTTGATGAGATGAGAGAAATGAGGGGAAATGGACAAGGCGTTAATGTGTTTGAGAAAATGAGGGAAGAGGATATACCTGCTGATGTGATTACGTACACCAGTATTATTGGGGGATTGGGATTGATTGGTCAACCCGACAAAGCGAGAAGTATTTTGAAAGAGATGAAGGAGTATGGATGTTACCCTGATGTTCCAGCTTATAATGCTGCAATACGAAATTATTGCATTGCGAAGAGGCTTCGTGAGGCTTTTGATTTGATGGATGAAATGGTGAATAAGGGTCTGAATCCAAAGCAACGCATTAACTTGTTCTTTAGGATTTTCTTCTGGTCCAATGACTTGCAAAGCTCGTGGAATTTATATCGTCGAATGATGGATACTGGGTGCTTGCCTAATACGCAATCCTGCTTGTTCCTAATGAGGTTGTTTAAGAAGCACGAAAAAGTAGACATTGCACTGGAGCTGTGGAATGACATGATACAAAGGGGTTTTGGGTCTTATATATTAGTATCCGAGGAGTTATTTGATCTTCTTTGTGATTTGGAAAGATTAGAAGCTGAGAGCTTTTTTCTAGAGATGGTAGATAAGGGGCATAAGCCTAGTAACGTCTCGTTTAAAAGGATCAAAGTACTCATGGAACTGGTAAATAAGCATGAGGCTCTTCAGAACTTGTCAAAGAAAATGGATGGTTTTTTGGATCCACAAAAACGCCTTCCTGAAACGATGAGTTATTCAGTAGATCTGTCAAATTTGAATTCATTTCCATGTTAA

Coding sequence (CDS)

ATGCTTTATATCCTAGGTAGAGGCCGCAAGTTTGAAAAAATTTGGGATGTTTTGGTTGATATTAAGCTTAAGGATCGGTCGTTAATCTCGCCGCGAACTGTCATGGTTGTTTTAGGAAGAATTGCCAAAGTGTGTTCTGTGAGGCAGACTGTAGAGTCTTTTAGGAAGTTCAAGAAGTTTGTTCCTGAGTTTGATGTCACTTGCTTTAATGCATTGTTGAGAACTCTGTGCCAGGAGAAGAGTATGATGGATGCGAGGAATGTTTACCACGGCATGAAGAGTAAGTTTAGGCCAAATTTGCAGACGTTTTACATATTATTGTCGGGTTGGAAGTCATCGGAAGAAGCTGAGGGATTCTTTGATGAGATGAGAGAAATGAGGGGAAATGGACAAGGCGTTAATGTGTTTGAGAAAATGAGGGAAGAGGATATACCTGCTGATGTGATTACGTACACCAGTATTATTGGGGGATTGGGATTGATTGGTCAACCCGACAAAGCGAGAAGTATTTTGAAAGAGATGAAGGAGTATGGATGTTACCCTGATGTTCCAGCTTATAATGCTGCAATACGAAATTATTGCATTGCGAAGAGGCTTCGTGAGGCTTTTGATTTGATGGATGAAATGGTGAATAAGGGTCTGAATCCAAAGCAACGCATTAACTTGTTCTTTAGGATTTTCTTCTGGTCCAATGACTTGCAAAGCTCGTGGAATTTATATCGTCGAATGATGGATACTGGGTGCTTGCCTAATACGCAATCCTGCTTGTTCCTAATGAGGTTGTTTAAGAAGCACGAAAAAGTAGACATTGCACTGGAGCTGTGGAATGACATGATACAAAGGGGTTTTGGGTCTTATATATTAGTATCCGAGGAGTTATTTGATCTTCTTTGTGATTTGGAAAGATTAGAAGCTGAGAGCTTTTTTCTAGAGATGGTAGATAAGGGGCATAAGCCTAGTAACGTCTCGTTTAAAAGGATCAAAGTACTCATGGAACTGGTAAATAAGCATGAGGCTCTTCAGAACTTGTCAAAGAAAATGGATGGTTTTTTGGATCCACAAAAACGCCTTCCTGAAACGATGAGTTATTCAGTAGATCTGTCAAATTTGAATTCATTTCCATGTTAA

Protein sequence

MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFFDEMREMRGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLIGQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPKQRINLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQRGFGSYILVSEELFDLLCDLERLEAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEALQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC

Homology

[Close]

BLAST of HG10019357.1 vs. NCBI nr
Match: XP_038903108.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Benincasa hispida])

HSP 1 Score: 662.5 bits (1708), Expect = 2.1e-186
Identity = 336/396 (84.85%), Postives = 348/396 (87.88%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 120 MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 179

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSMMDARNVYH +KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 180 VPEFDVTCFNALLRTLCQEKSMMDARNVYHSLKSKFRPNLQTFNILLSGWKSSEEAEGFF 239

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           +EMREM                   R   +   V EKMR+EDI ADVITYTS+IGGLGLI
Sbjct: 240 NEMREMGVKPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSVIGGLGLI 299

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNAAIRN+CIAKRLR AFDLMDEMVNKGL+P     
Sbjct: 300 GQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLRGAFDLMDEMVNKGLSPNATTY 359

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDLQSSWNLYRRMMDT CLPNTQSCLFLMRLFKKHE V++ALELWNDMIQ
Sbjct: 360 NLFFRIFFWSNDLQSSWNLYRRMMDTCCLPNTQSCLFLMRLFKKHENVEMALELWNDMIQ 419

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           RGFGSYILVSEELFD LCDL +L EAE  FL+MVDKGHKPSNVSFKRIKVLMEL NKHE 
Sbjct: 420 RGFGSYILVSEELFDFLCDLGKLIEAERCFLQMVDKGHKPSNVSFKRIKVLMELANKHEV 479

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSKKMDGFLDPQKRLPETMSYS DLSN NSF C
Sbjct: 480 LQNLSKKMDGFLDPQKRLPETMSYSTDLSNSNSFQC 515

[Close]

BLAST of HG10019357.1 vs. NCBI nr
Match: XP_008447459.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 [Cucumis melo])

HSP 1 Score: 649.4 bits (1674), Expect = 1.8e-182
Identity = 329/396 (83.08%), Postives = 346/396 (87.37%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGRGRKF  IWDVLVD+KLKD SLIS RTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 57  MLYILGRGRKFNLIWDVLVDVKLKDPSLISVRTVMVVLGRIAKVCSVRQTVESFRKFKKF 116

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSMMDARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 117 VPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 176

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEM EM                   R   +   V EKMR+EDIPADVITYTSIIGGLGLI
Sbjct: 177 DEMIEMGVKPDVVSYNSLVDVYCKNREMDKAFKVVEKMRDEDIPADVITYTSIIGGLGLI 236

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNA IRN+CIAKRL EAFDL+DEMVNKGL+P     
Sbjct: 237 GQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTY 296

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDL+S+WNLYRRMMDTGCLPNTQSCLFL+RLFKK+EK D+ALELWNDMIQ
Sbjct: 297 NLFFRIFFWSNDLKSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEDMALELWNDMIQ 356

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           +GFGSYILVSEELFDLLCDL +L EAES FL+MVDKGHKPS+ SFKRIKVLMEL NKHEA
Sbjct: 357 KGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSHTSFKRIKVLMELANKHEA 416

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSKKMDGFLDPQKRLP TMSYS DLSN NS PC
Sbjct: 417 LQNLSKKMDGFLDPQKRLPGTMSYSADLSNSNSSPC 452

[Close]

BLAST of HG10019357.1 vs. NCBI nr
Match: XP_022948942.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita moschata])

HSP 1 Score: 649.4 bits (1674), Expect = 1.8e-182
Identity = 325/396 (82.07%), Postives = 345/396 (87.12%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGR RKFEKIWDVL+D+KLKDRSLI+PRTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 114 MLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 173

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSM DARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 174 VPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 233

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEMREM                   R   +   V EKMR+EDI ADVITYTSIIGGLGLI
Sbjct: 234 DEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLI 293

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNAAIRN+CIAKRLREAFDLMDEM NKGLNP     
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTY 353

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEKV++AL+LWNDM++
Sbjct: 354 NLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVE 413

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           RGFGSYILVSEELFDLLCDL +L EAE  FL+MVDKGHKPSNVSFKRIKVLMEL NKHEA
Sbjct: 414 RGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRIKVLMELANKHEA 473

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSK M+ FLDP + LPETM+  +DLSNLNS PC
Sbjct: 474 LQNLSKIMESFLDPSRHLPETMTRPIDLSNLNSLPC 509

[Close]

BLAST of HG10019357.1 vs. NCBI nr
Match: XP_008447458.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 [Cucumis melo] >KAA0038111.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20496.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 649.4 bits (1674), Expect = 1.8e-182
Identity = 329/396 (83.08%), Postives = 346/396 (87.37%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGRGRKF  IWDVLVD+KLKD SLIS RTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 114 MLYILGRGRKFNLIWDVLVDVKLKDPSLISVRTVMVVLGRIAKVCSVRQTVESFRKFKKF 173

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSMMDARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 174 VPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 233

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEM EM                   R   +   V EKMR+EDIPADVITYTSIIGGLGLI
Sbjct: 234 DEMIEMGVKPDVVSYNSLVDVYCKNREMDKAFKVVEKMRDEDIPADVITYTSIIGGLGLI 293

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNA IRN+CIAKRL EAFDL+DEMVNKGL+P     
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTY 353

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDL+S+WNLYRRMMDTGCLPNTQSCLFL+RLFKK+EK D+ALELWNDMIQ
Sbjct: 354 NLFFRIFFWSNDLKSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEDMALELWNDMIQ 413

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           +GFGSYILVSEELFDLLCDL +L EAES FL+MVDKGHKPS+ SFKRIKVLMEL NKHEA
Sbjct: 414 KGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSHTSFKRIKVLMELANKHEA 473

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSKKMDGFLDPQKRLP TMSYS DLSN NS PC
Sbjct: 474 LQNLSKKMDGFLDPQKRLPGTMSYSADLSNSNSSPC 509

[Close]

BLAST of HG10019357.1 vs. NCBI nr
Match: XP_023522207.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649.0 bits (1673), Expect = 2.4e-182
Identity = 325/396 (82.07%), Postives = 344/396 (86.87%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGR RKFEKIWDVL+D+KLKDRSLI+PRTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 114 MLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 173

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSM DARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 174 VPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 233

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEMREM                   R   +   V EKMR+EDI ADVITYTSIIGGLGLI
Sbjct: 234 DEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLI 293

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNAAIRN+CIAKRLREAFDLMDEM NKGLNP     
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMTNKGLNPNATTY 353

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEK+D+AL+LWNDM++
Sbjct: 354 NLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKIDMALQLWNDMVE 413

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           RGFGSYILVSEELFDLLCDL +L EAE  FL+MVDKGHKPSNVSFKRIKVLMEL NKHEA
Sbjct: 414 RGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRIKVLMELANKHEA 473

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSK M+ FLDP +RLPE M+   DLSNLNS PC
Sbjct: 474 LQNLSKIMESFLDPSRRLPEPMTRPADLSNLNSLPC 509

[Close]

BLAST of HG10019357.1 vs. ExPASy Swiss-Prot
Match: Q9FZ19 (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana OX=3702 GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-133
Identity = 238/369 (64.50%), Postives = 289/369 (78.32%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGR RKF++IW++L++ K KDRSLISPRT+ VVLGR+AK+CSVRQTVESF KFK+ 
Sbjct: 114 MLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRL 173

Query: 61  VPE-FDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGF 120
           VP+ FD  CFNALLRTLCQEKSM DARNVYH +K +F+P+LQTF ILLSGWKSSEEAE F
Sbjct: 174 VPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAF 233

Query: 121 FDEMR-------------------EMRGNGQGVNVFEKMREEDIPADVITYTSIIGGLGL 180
           F+EM+                   + R   +   + +KMREE+   DVITYT++IGGLGL
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293

Query: 181 IGQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QR 240
           IGQPDKAR +LKEMKEYGCYPDV AYNAAIRN+CIA+RL +A  L+DEMV KGL+P    
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353

Query: 241 INLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMI 300
            NLFFR+   +NDL  SW LY RM+   CLPNTQSC+FL+++FK+HEKVD+A+ LW DM+
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413

Query: 301 QRGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHE 348
            +GFGSY LVS+ L DLLCDL ++ EAE   LEMV+KGH+PSNVSFKRIK+LMEL NKH+
Sbjct: 414 VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHD 473

[Close]

BLAST of HG10019357.1 vs. ExPASy Swiss-Prot
Match: Q9M2C8 (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX=3702 GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.6e-35
Identity = 105/384 (27.34%), Postives = 189/384 (49.22%), Query Frame = 0


Query: 2   LYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKK-- 61
           L+IL R R F++ W ++ +++    +L+S +++ ++L +IAK  S  +T+E+F K +K  
Sbjct: 110 LHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEI 169

Query: 62  FVPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEE---A 121
           F  +F V  FN LLR  C E+ M +AR+++  + S+F P+++T  ILL G+K + +    
Sbjct: 170 FRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTAT 229

Query: 122 EGFFDEM-------------------REMRGNGQGVNVFEKMREEDIPADVITYTSIIGG 181
           E F+ EM                    + R  G+ + +FE M   D    V   T++I G
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHG 289

Query: 182 LGLIGQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK 241
            G+     KAR +  E+ + G  PD  AYNA + +      +  A  +M EM  KG+ P 
Sbjct: 290 SGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEP- 349

Query: 242 QRINLFFRIFFWSNDLQSSWN----LYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALE 301
             +             +  +N     Y++M +   +P T + + LM+LF  + +V++ L+
Sbjct: 350 DSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLD 409

Query: 302 LWNDMIQRGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLME 354
           LW  M+++G+  +    E L   LC   R  +A     + V++G   S   ++ ++  + 
Sbjct: 410 LWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLS 469

[Close]

BLAST of HG10019357.1 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.7e-34
Identity = 97/368 (26.36%), Postives = 177/368 (48.10%), Query Frame = 0


Query: 5   LGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEF 64
           LG+ ++F+ IW ++ D+K K   L+S  T  ++  R A+   V++ + +F K ++F  + 
Sbjct: 138 LGKIKQFKLIWSLVDDMKAK--KLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKM 197

Query: 65  DVTCFNALLRTLCQEKSMMDARNVYHGMKSK-FRPNLQTFYILLSGWKSSEEAEGFFDEM 124
           + + FN +L TL + +++ DA+ V+  MK K F P+++++ ILL GW          +  
Sbjct: 198 ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN 257

Query: 125 REMRGNG----------------------QGVNVFEKMREEDIPADVITYTSIIGGLGLI 184
           REM+  G                      + +  F +M + +       + S+I GLG  
Sbjct: 258 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 317

Query: 185 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPKQRIN 244
            + + A    +  K  G   + P YNA +  YC ++R+ +A+  +DEM  KG+ P  R  
Sbjct: 318 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR-- 377

Query: 245 LFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQR 304
            +  I      +Q S   Y       C P   +   ++R+F   E++D+A+++W++M  +
Sbjct: 378 TYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 437

Query: 305 GFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEAL 349
           G    + +   L   LC   +L EA  +F EM+D G +P    F R+K  +    + + +
Sbjct: 438 GVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKV 497

[Close]

BLAST of HG10019357.1 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 2.5e-33
Identity = 101/349 (28.94%), Postives = 180/349 (51.58%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           M+ ILG+ RKF+  W ++ +++    SL++ +T+++++ +   V  V + + +F  +K+F
Sbjct: 167 MISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRF 226

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGW----KSSEEA 120
             E  +  F +LL  LC+ K++ DA ++    K K+  + ++F I+L+GW     S  EA
Sbjct: 227 KLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREA 286

Query: 121 EGFFDEMREM---------------RGNGQGVN----VFEKMREEDIPADVITYTSIIGG 180
           E  + EM  +                  G  +N    +F++M++E I  D   Y +++  
Sbjct: 287 ERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHA 346

Query: 181 LGLIGQPDKARSILKEM-KEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNP 240
           L       +AR+++K M +E G  P+V  YN+ I+  C A++  EA  + DEM+ KGL P
Sbjct: 347 LAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP 406

Query: 241 KQR-INLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELW 300
             R  + F RI     ++   + L  +M   GC P  ++ + L+R   +    D  L LW
Sbjct: 407 TIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLW 466

Query: 301 NDMIQRGFG----SYILVSEELFDLLCDLERLEAESFFLEMVDKGHKPS 321
           ++M ++  G    SYI++   LF L   +E  EA  ++ EM DKG +P+
Sbjct: 467 DEMKEKTVGPDLSSYIVMIHGLF-LNGKIE--EAYGYYKEMKDKGMRPN 509

[Close]

BLAST of HG10019357.1 vs. ExPASy Swiss-Prot
Match: Q0WP85 (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.8e-29
Identity = 99/381 (25.98%), Postives = 172/381 (45.14%), Query Frame = 0


Query: 4   ILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVP- 63
           ILGR R+F+ +  ++V++        SP T ++++ R+      RQ V +F     F+  
Sbjct: 114 ILGRVRQFDVVRQLIVEM-----DQTSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLEN 173

Query: 64  -EFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGW---KSSEEAEG 123
             F +  F  LL TLC+      A  V++  K +F  + + + IL++GW   +  + AE 
Sbjct: 174 RRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEK 233

Query: 124 FFDEMREM-----------------------------RGNGQGVNVFEKMREEDIPADVI 183
           F  EM E                              R       VF++MR+  I  DV 
Sbjct: 234 FLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVT 293

Query: 184 TYTSIIGGLGLIGQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEM 243
           +++ ++       + +     +K MK  G  P +  Y + ++  C   RL EA +L++ M
Sbjct: 294 SFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETM 353

Query: 244 VNKGLNPKQ-RINLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKV 303
           V  G++P     N FF+ +    D   + NLYR+M +  C P+TQ+   L+  F    K+
Sbjct: 354 VESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKM 413

Query: 304 DIALELWNDMIQRGFGSYILVSEELFDLLCDLER-LEAESFFLEMVDKGHKPSNVSFKRI 349
           +   E+W+D+     G  +     L   LC  E+  EA  +F+EM+++G  P  ++F+ +
Sbjct: 414 ETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETL 473

[Close]

BLAST of HG10019357.1 vs. ExPASy TrEMBL
Match: A0A5A7T8Z7 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00700 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 9.0e-183
Identity = 329/396 (83.08%), Postives = 346/396 (87.37%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGRGRKF  IWDVLVD+KLKD SLIS RTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 114 MLYILGRGRKFNLIWDVLVDVKLKDPSLISVRTVMVVLGRIAKVCSVRQTVESFRKFKKF 173

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSMMDARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 174 VPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 233

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEM EM                   R   +   V EKMR+EDIPADVITYTSIIGGLGLI
Sbjct: 234 DEMIEMGVKPDVVSYNSLVDVYCKNREMDKAFKVVEKMRDEDIPADVITYTSIIGGLGLI 293

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNA IRN+CIAKRL EAFDL+DEMVNKGL+P     
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTY 353

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDL+S+WNLYRRMMDTGCLPNTQSCLFL+RLFKK+EK D+ALELWNDMIQ
Sbjct: 354 NLFFRIFFWSNDLKSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEDMALELWNDMIQ 413

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           +GFGSYILVSEELFDLLCDL +L EAES FL+MVDKGHKPS+ SFKRIKVLMEL NKHEA
Sbjct: 414 KGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSHTSFKRIKVLMELANKHEA 473

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSKKMDGFLDPQKRLP TMSYS DLSN NS PC
Sbjct: 474 LQNLSKKMDGFLDPQKRLPGTMSYSADLSNSNSSPC 509

[Close]

BLAST of HG10019357.1 vs. ExPASy TrEMBL
Match: A0A6J1GAM6 (putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita moschata OX=3662 GN=LOC111452441 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 9.0e-183
Identity = 325/396 (82.07%), Postives = 345/396 (87.12%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGR RKFEKIWDVL+D+KLKDRSLI+PRTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 114 MLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 173

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSM DARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 174 VPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 233

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEMREM                   R   +   V EKMR+EDI ADVITYTSIIGGLGLI
Sbjct: 234 DEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLI 293

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNAAIRN+CIAKRLREAFDLMDEM NKGLNP     
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTY 353

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEKV++AL+LWNDM++
Sbjct: 354 NLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVE 413

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           RGFGSYILVSEELFDLLCDL +L EAE  FL+MVDKGHKPSNVSFKRIKVLMEL NKHEA
Sbjct: 414 RGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRIKVLMELANKHEA 473

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSK M+ FLDP + LPETM+  +DLSNLNS PC
Sbjct: 474 LQNLSKIMESFLDPSRHLPETMTRPIDLSNLNSLPC 509

[Close]

BLAST of HG10019357.1 vs. ExPASy TrEMBL
Match: A0A1S3BI42 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489902 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 9.0e-183
Identity = 329/396 (83.08%), Postives = 346/396 (87.37%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGRGRKF  IWDVLVD+KLKD SLIS RTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 114 MLYILGRGRKFNLIWDVLVDVKLKDPSLISVRTVMVVLGRIAKVCSVRQTVESFRKFKKF 173

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSMMDARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 174 VPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 233

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEM EM                   R   +   V EKMR+EDIPADVITYTSIIGGLGLI
Sbjct: 234 DEMIEMGVKPDVVSYNSLVDVYCKNREMDKAFKVVEKMRDEDIPADVITYTSIIGGLGLI 293

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNA IRN+CIAKRL EAFDL+DEMVNKGL+P     
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTY 353

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDL+S+WNLYRRMMDTGCLPNTQSCLFL+RLFKK+EK D+ALELWNDMIQ
Sbjct: 354 NLFFRIFFWSNDLKSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEDMALELWNDMIQ 413

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           +GFGSYILVSEELFDLLCDL +L EAES FL+MVDKGHKPS+ SFKRIKVLMEL NKHEA
Sbjct: 414 KGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSHTSFKRIKVLMELANKHEA 473

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSKKMDGFLDPQKRLP TMSYS DLSN NS PC
Sbjct: 474 LQNLSKKMDGFLDPQKRLPGTMSYSADLSNSNSSPC 509

[Close]

BLAST of HG10019357.1 vs. ExPASy TrEMBL
Match: A0A1S3BIE0 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489902 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 9.0e-183
Identity = 329/396 (83.08%), Postives = 346/396 (87.37%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGRGRKF  IWDVLVD+KLKD SLIS RTVMVVLGRIAKVCSVRQTVESFRKFKKF
Sbjct: 57  MLYILGRGRKFNLIWDVLVDVKLKDPSLISVRTVMVVLGRIAKVCSVRQTVESFRKFKKF 116

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSMMDARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 117 VPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 176

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEM EM                   R   +   V EKMR+EDIPADVITYTSIIGGLGLI
Sbjct: 177 DEMIEMGVKPDVVSYNSLVDVYCKNREMDKAFKVVEKMRDEDIPADVITYTSIIGGLGLI 236

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNA IRN+CIAKRL EAFDL+DEMVNKGL+P     
Sbjct: 237 GQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTY 296

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDL+S+WNLYRRMMDTGCLPNTQSCLFL+RLFKK+EK D+ALELWNDMIQ
Sbjct: 297 NLFFRIFFWSNDLKSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEDMALELWNDMIQ 356

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           +GFGSYILVSEELFDLLCDL +L EAES FL+MVDKGHKPS+ SFKRIKVLMEL NKHEA
Sbjct: 357 KGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSHTSFKRIKVLMELANKHEA 416

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSKKMDGFLDPQKRLP TMSYS DLSN NS PC
Sbjct: 417 LQNLSKKMDGFLDPQKRLPGTMSYSADLSNSNSSPC 452

[Close]

BLAST of HG10019357.1 vs. ExPASy TrEMBL
Match: A0A6J1KCH6 (putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita maxima OX=3661 GN=LOC111493066 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.9e-181
Identity = 324/396 (81.82%), Postives = 343/396 (86.62%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGR RKFEKIWDVL+D+KLKDRSLI+PRTVMVVLGRIAKVCSVRQTVESFRK KKF
Sbjct: 114 MLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKLKKF 173

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFF 120
           VPEFDVTCFNALLRTLCQEKSM DARNVYHG+KSKFRPNLQTF ILLSGWKSSEEAEGFF
Sbjct: 174 VPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFF 233

Query: 121 DEMREM-------------------RGNGQGVNVFEKMREEDIPADVITYTSIIGGLGLI 180
           DEMREM                   R   +   V EKMR+EDI ADVITYTSIIGGLGLI
Sbjct: 234 DEMREMGVQPDVVSYNCLIDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLI 293

Query: 181 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QRI 240
           GQPDKAR+ILKEMKEYGCYPDV AYNAAIRN+CIAKRLREAFDLMDEM NKGLNP     
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTY 353

Query: 241 NLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQ 300
           NLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEKV++AL+LWNDM++
Sbjct: 354 NLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVE 413

Query: 301 RGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEA 360
           RGFGSYILVSEELFDLLCDL +L EAE  FL+MVDKGHKPSNVSFKRIKVLMEL NKHEA
Sbjct: 414 RGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRIKVLMELANKHEA 473

Query: 361 LQNLSKKMDGFLDPQKRLPETMSYSVDLSNLNSFPC 376
           LQNLSK M+ FLDP K LP+TM+   DLSNLNS PC
Sbjct: 474 LQNLSKIMESFLDPLKCLPKTMTRPADLSNLNSLPC 509

[Close]

BLAST of HG10019357.1 vs. TAIR 10
Match: AT1G02420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 477.6 bits (1228), Expect = 9.0e-135
Identity = 238/369 (64.50%), Postives = 289/369 (78.32%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           MLYILGR RKF++IW++L++ K KDRSLISPRT+ VVLGR+AK+CSVRQTVESF KFK+ 
Sbjct: 114 MLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRL 173

Query: 61  VPE-FDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGF 120
           VP+ FD  CFNALLRTLCQEKSM DARNVYH +K +F+P+LQTF ILLSGWKSSEEAE F
Sbjct: 174 VPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAF 233

Query: 121 FDEMR-------------------EMRGNGQGVNVFEKMREEDIPADVITYTSIIGGLGL 180
           F+EM+                   + R   +   + +KMREE+   DVITYT++IGGLGL
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293

Query: 181 IGQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK-QR 240
           IGQPDKAR +LKEMKEYGCYPDV AYNAAIRN+CIA+RL +A  L+DEMV KGL+P    
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353

Query: 241 INLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMI 300
            NLFFR+   +NDL  SW LY RM+   CLPNTQSC+FL+++FK+HEKVD+A+ LW DM+
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413

Query: 301 QRGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHE 348
            +GFGSY LVS+ L DLLCDL ++ EAE   LEMV+KGH+PSNVSFKRIK+LMEL NKH+
Sbjct: 414 VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHD 473

[Close]

BLAST of HG10019357.1 vs. TAIR 10
Match: AT3G61360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 3.3e-36
Identity = 105/384 (27.34%), Postives = 189/384 (49.22%), Query Frame = 0


Query: 2   LYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKK-- 61
           L+IL R R F++ W ++ +++    +L+S +++ ++L +IAK  S  +T+E+F K +K  
Sbjct: 110 LHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEI 169

Query: 62  FVPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEE---A 121
           F  +F V  FN LLR  C E+ M +AR+++  + S+F P+++T  ILL G+K + +    
Sbjct: 170 FRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTAT 229

Query: 122 EGFFDEM-------------------REMRGNGQGVNVFEKMREEDIPADVITYTSIIGG 181
           E F+ EM                    + R  G+ + +FE M   D    V   T++I G
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHG 289

Query: 182 LGLIGQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPK 241
            G+     KAR +  E+ + G  PD  AYNA + +      +  A  +M EM  KG+ P 
Sbjct: 290 SGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEP- 349

Query: 242 QRINLFFRIFFWSNDLQSSWN----LYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALE 301
             +             +  +N     Y++M +   +P T + + LM+LF  + +V++ L+
Sbjct: 350 DSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLD 409

Query: 302 LWNDMIQRGFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLME 354
           LW  M+++G+  +    E L   LC   R  +A     + V++G   S   ++ ++  + 
Sbjct: 410 LWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLS 469

[Close]

BLAST of HG10019357.1 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 6.2e-35
Identity = 97/368 (26.36%), Postives = 177/368 (48.10%), Query Frame = 0


Query: 5   LGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEF 64
           LG+ ++F+ IW ++ D+K K   L+S  T  ++  R A+   V++ + +F K ++F  + 
Sbjct: 138 LGKIKQFKLIWSLVDDMKAK--KLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKM 197

Query: 65  DVTCFNALLRTLCQEKSMMDARNVYHGMKSK-FRPNLQTFYILLSGWKSSEEAEGFFDEM 124
           + + FN +L TL + +++ DA+ V+  MK K F P+++++ ILL GW          +  
Sbjct: 198 ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN 257

Query: 125 REMRGNG----------------------QGVNVFEKMREEDIPADVITYTSIIGGLGLI 184
           REM+  G                      + +  F +M + +       + S+I GLG  
Sbjct: 258 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 317

Query: 185 GQPDKARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPKQRIN 244
            + + A    +  K  G   + P YNA +  YC ++R+ +A+  +DEM  KG+ P  R  
Sbjct: 318 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR-- 377

Query: 245 LFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQR 304
            +  I      +Q S   Y       C P   +   ++R+F   E++D+A+++W++M  +
Sbjct: 378 TYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 437

Query: 305 GFGSYILVSEELFDLLCDLERL-EAESFFLEMVDKGHKPSNVSFKRIKVLMELVNKHEAL 349
           G    + +   L   LC   +L EA  +F EM+D G +P    F R+K  +    + + +
Sbjct: 438 GVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKV 497

[Close]

BLAST of HG10019357.1 vs. TAIR 10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-34
Identity = 101/349 (28.94%), Postives = 180/349 (51.58%), Query Frame = 0


Query: 1   MLYILGRGRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKF 60
           M+ ILG+ RKF+  W ++ +++    SL++ +T+++++ +   V  V + + +F  +K+F
Sbjct: 167 MISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRF 226

Query: 61  VPEFDVTCFNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGW----KSSEEA 120
             E  +  F +LL  LC+ K++ DA ++    K K+  + ++F I+L+GW     S  EA
Sbjct: 227 KLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREA 286

Query: 121 EGFFDEMREM---------------RGNGQGVN----VFEKMREEDIPADVITYTSIIGG 180
           E  + EM  +                  G  +N    +F++M++E I  D   Y +++  
Sbjct: 287 ERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHA 346

Query: 181 LGLIGQPDKARSILKEM-KEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNP 240
           L       +AR+++K M +E G  P+V  YN+ I+  C A++  EA  + DEM+ KGL P
Sbjct: 347 LAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP 406

Query: 241 KQR-INLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELW 300
             R  + F RI     ++   + L  +M   GC P  ++ + L+R   +    D  L LW
Sbjct: 407 TIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLW 466

Query: 301 NDMIQRGFG----SYILVSEELFDLLCDLERLEAESFFLEMVDKGHKPS 321
           ++M ++  G    SYI++   LF L   +E  EA  ++ EM DKG +P+
Sbjct: 467 DEMKEKTVGPDLSSYIVMIHGLF-LNGKIE--EAYGYYKEMKDKGMRPN 509

[Close]

BLAST of HG10019357.1 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 2.3e-29
Identity = 78/364 (21.43%), Postives = 174/364 (47.80%), Query Frame = 0


Query: 9   RKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTC 68
           R+++ +WD++    ++ + +++  T  +V+ + A+   V + + +F   +K+    ++  
Sbjct: 148 RQYKLMWDLI--NAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVA 207

Query: 69  FNALLRTLCQEKSMMDARNVYHGMKSKFRPNLQTFYILLSGWKSSEEAEGFFDEMREMRG 128
           FN LL  LC+ K++  A+ V+  M+ +F P+ +T+ ILL GW          +  REM  
Sbjct: 208 FNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMID 267

Query: 129 NG----------------------QGVNVFEKMREEDIPADVITYTSIIGGLGLIGQPDK 188
            G                      + + +   M           Y+ ++   G   + ++
Sbjct: 268 AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEE 327

Query: 189 ARSILKEMKEYGCYPDVPAYNAAIRNYCIAKRLREAFDLMDEMVNKGLNPKQR-INLFFR 248
           A     EM+  G   DV  +N+ I  +C A R++  + ++ EM +KG+ P  +  N+  R
Sbjct: 328 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 387

Query: 249 IFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVDIALELWNDMIQRGFGS 308
                 +   +++++R+M+   C P+  +   ++++F + ++++ A ++W  M ++G   
Sbjct: 388 HLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 447

Query: 309 YILVSEELFDLLCDLERLEAESFFL-EMVDKGHKPSNVSFKRIKVLMELVNKHEALQNLS 349
            +     L + LC+    +     L EM++ G +PS V+F R++ L+    + + L+ L+
Sbjct: 448 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLN 507

The following BLAST results are available for this feature:

BLAST of HG10019357.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903108.1	2.1e-186	84.85	putative pentatricopeptide repeat-containing protein At1g02420 [Benincasa hispid...	[more]
XP_008447459.1	1.8e-182	83.08	PREDICTED: putative pentatricopeptide repeat-containing protein At1g02420 isofor...	[more]
XP_022948942.1	1.8e-182	82.07	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita moscha...	[more]
XP_008447458.1	1.8e-182	83.08	PREDICTED: putative pentatricopeptide repeat-containing protein At1g02420 isofor...	[more]
XP_023522207.1	2.4e-182	82.07	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita pepo s...	[more]

BLAST of HG10019357.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ19	1.3e-133	64.50	Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th...	[more]
Q9M2C8	4.6e-35	27.34	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX...	[more]
Q9C9A2	8.7e-34	26.36	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9LFQ4	2.5e-33	28.94	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
Q0WP85	3.8e-29	25.98	Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop...	[more]

BLAST of HG10019357.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8Z7	9.0e-183	83.08	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1GAM6	9.0e-183	82.07	putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita mosc...	[more]
A0A1S3BI42	9.0e-183	83.08	putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 OS=Cuc...	[more]
A0A1S3BIE0	9.0e-183	83.08	putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Cuc...	[more]
A0A6J1KCH6	4.9e-181	81.82	putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita maxi...	[more]

BLAST of HG10019357.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02420.1	9.0e-135	64.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G61360.1	3.3e-36	27.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G71060.1	6.2e-35	26.36	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G15010.1	1.8e-34	28.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G77360.1	2.3e-29	21.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 63..108 e-value: 0.0097 score: 16.0 coord: 135..191 e-value: 1.1E-9 score: 38.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 68..95 e-value: 4.1E-4 score: 18.3 coord: 149..183 e-value: 1.9E-9 score: 35.1 coord: 185..216 e-value: 1.2E-6 score: 26.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 258..283 e-value: 0.029 score: 14.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 147..181 score: 12.090371
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 182..216 score: 11.893068
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 221..361 e-value: 8.1E-12 score: 47.1 coord: 129..220 e-value: 1.0E-23 score: 86.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 10..128 e-value: 2.0E-11 score: 45.6
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1..126 coord: 133..356
None	No IPR available	PANTHER	PTHR47933:SF29	OS03G0208600 PROTEIN	coord: 1..126 coord: 133..356

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10019357	HG10019357	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10019357.1-cds	HG10019357.1-cds-Chr04:20796651..20797031	CDS
HG10019357.1-cds	HG10019357.1-cds-Chr04:20797088..20797834	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10019357.1	HG10019357.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding