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HG10010690.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCCAGAGATCATCGAGATTGGAGACGAAAGTAAGACTATTATTAGTAGCAGAGACGGTGGCGCAACCGACTTCTATGTCGCCGTTGGTAAAGATGATATAGATGTGCTTAAATGGGCCCCTAATCATGCTGTCTCACCTGGTTGTTGTGTCTTTCTTGCCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGGTAATCAAGATTTCTCCTTTCTTTCTCTTTTTTCCATCTTTCAGATCATAATCAAAGATTCACAAATCAGTCAATAACTTTTCTAGCTTGTTTTTCTTGCATAATCTGCCTATAAAGGATGTTTGATGCACATTGGCCATAAGGAAATGTCATTATTTTGTTCCTTTTGCCTCTTTTGACTATCTGTGTTCCTTCCAAAAGAGTCAAACTCAAGCATAGATTGTAAACATAAATTCTTCTTTAGATGATAGGATAGGAAGAAAACTAACTCCAAAATGTGTGTTGATGGAACAAAACATGTTTTTGTTTATGCAATGGAAATTCTCTTCAAACACCAAAGAAAAAGATATGATCAAGAGAATATTAGCATATTCATTGGGTTGAAATTCATCTATTGATGTGAGTTGCAGCATTTTTACTTGTAATCCTATTTTGGTTTCAGTTGGAAGATTAGCAAGGAGTCAACTGACTCAAGAACAATTAAGAGTGTATATCAATGAAGACAACACCGAAGAGAAATTTATTGCAGAAATACATCCGCTTATGCACTGATGCTAAGGTGTTCCTAAATCACTCCCTCCTTGTTGATTTTAACATTTATAATCACTCTAAAACATACTTTCACCACACAAAATCAATTCAATGTGTGATTTTACATGTTTAAATGCATTTTTCATAGTATTAAAGTTGATTTTGAAGGAACAAAAGTACTTTTCGAGTGGTTTTCAAAATAACAAAAGTGATTTTGACCATAGGTGTTCCTAAATCACTCCCTCCCCGTGTCAAAACAATCTCATAAGTACATTTTTGGAATGATTTTGAAATGGTTAAAAACACTTTTGTCACGTTTATATCACTTCAAAACATATCTGCATCACTCAACATCAATTCAAGGTTTAGTTTTATACGTTAAAATGCATTTTTCATAGTATTAATATTGATTTTGAAAGAGTAAAAAGCACTTTTCAAGTAATTTTGAAAATGCCAAAAGTAATTTTAACCATTTAAGAATCACTCACGAACACGTCTTAAGCCGAAAAAACTAATTTGTCCCCATGTTGTCTCAGGTGACAGTGGACACATTGCTTCTAGAGAGCAACACAACAAGCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACAAATTTGGTCATAGGGACTAAAAAGCCACTTTCCACAAGGTTTGGAGAACTTTTCTTTTGTAATTCATTTTGGGGTTTTTTTTTTTTTTTTCAATTCCCTATGTTTTGCAATTTCTTGACAGAATATTAGGGAAAAGAATGGCGAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGCGAGGTTACCATTGTTTATGAAGGCAAAAAAGTGGATGATCAGCGTCAACAGGAAATGGGTTTGCTTTCTCCTTCTCAAGATTCCGATTGTCGGCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGCGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGA ATGTCCCCAGAGATCATCGAGATTGGAGACGAAAGTAAGACTATTATTAGTAGCAGAGACGGTGGCGCAACCGACTTCTATGTCGCCGTTGGTAAAGATGATATAGATGTGCTTAAATGGGCCCCTAATCATGCTGTCTCACCTGGTTGTTGTGTCTTTCTTGCCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGTGGACACATTGCTTCTAGAGAGCAACACAACAAGCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACAAATTTGGTCATAGGGACTAAAAAGCCACTTTCCACAAGAATATTAGGGAAAAGAATGGCGAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGCGAGGTTACCATTGTTTATGAAGGCAAAAAAGTGGATGATCAGCGTCAACAGGAAATGGGTTTGCTTTCTCCTTCTCAAGATTCCGATTGTCGGCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGCGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGA ATGTCCCCAGAGATCATCGAGATTGGAGACGAAAGTAAGACTATTATTAGTAGCAGAGACGGTGGCGCAACCGACTTCTATGTCGCCGTTGGTAAAGATGATATAGATGTGCTTAAATGGGCCCCTAATCATGCTGTCTCACCTGGTTGTTGTGTCTTTCTTGCCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGTGGACACATTGCTTCTAGAGAGCAACACAACAAGCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACAAATTTGGTCATAGGGACTAAAAAGCCACTTTCCACAAGAATATTAGGGAAAAGAATGGCGAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGCGAGGTTACCATTGTTTATGAAGGCAAAAAAGTGGATGATCAGCGTCAACAGGAAATGGGTTTGCTTTCTCCTTCTCAAGATTCCGATTGTCGGCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGCGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGA MSPEIIEIGDESKTIISSRDGGATDFYVAVGKDDIDVLKWAPNHAVSPGCCVFLAHVFPPLTYIPTPVDTLLLESNTTSKAILQLIPVLNITNLVIGTKKPLSTRILGKRMAKGEFVKKNAPEFCEVTIVYEGKKVDDQRQQEMGLLSPSQDSDCRRRRRSGKNLFECVCLSSKSGCD Homology
BLAST of HG10010690.1 vs. NCBI nr
Match: XP_038876192.1 (U-box domain-containing protein 33-like [Benincasa hispida]) HSP 1 Score: 298.1 bits (762), Expect = 5.0e-77 Identity = 160/220 (72.73%), Postives = 168/220 (76.36%), Query Frame = 0
BLAST of HG10010690.1 vs. NCBI nr
Match: XP_022135422.1 (U-box domain-containing protein 33-like [Momordica charantia]) HSP 1 Score: 285.8 bits (730), Expect = 2.5e-73 Identity = 157/220 (71.36%), Postives = 166/220 (75.45%), Query Frame = 0
BLAST of HG10010690.1 vs. NCBI nr
Match: XP_023516951.1 (U-box domain-containing protein 33-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.7 bits (722), Expect = 2.2e-72 Identity = 157/220 (71.36%), Postives = 163/220 (74.09%), Query Frame = 0
BLAST of HG10010690.1 vs. NCBI nr
Match: KAA0057823.1 (U-box domain-containing protein 33-like [Cucumis melo var. makuwa]) HSP 1 Score: 282.3 bits (721), Expect = 2.8e-72 Identity = 155/220 (70.45%), Postives = 165/220 (75.00%), Query Frame = 0
BLAST of HG10010690.1 vs. NCBI nr
Match: XP_022965037.1 (U-box domain-containing protein 33-like [Cucurbita moschata]) HSP 1 Score: 281.6 bits (719), Expect = 4.8e-72 Identity = 156/220 (70.91%), Postives = 163/220 (74.09%), Query Frame = 0
BLAST of HG10010690.1 vs. ExPASy TrEMBL
Match: A0A6J1C2N1 (U-box domain-containing protein 33-like OS=Momordica charantia OX=3673 GN=LOC111007380 PE=4 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.2e-73 Identity = 157/220 (71.36%), Postives = 166/220 (75.45%), Query Frame = 0
BLAST of HG10010690.1 vs. ExPASy TrEMBL
Match: A0A5A7UPM8 (U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001080 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.4e-72 Identity = 155/220 (70.45%), Postives = 165/220 (75.00%), Query Frame = 0
BLAST of HG10010690.1 vs. ExPASy TrEMBL
Match: A0A0A0LNU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004060 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.3e-72 Identity = 153/220 (69.55%), Postives = 166/220 (75.45%), Query Frame = 0
BLAST of HG10010690.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ95 (U-box domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111464982 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.3e-72 Identity = 156/220 (70.91%), Postives = 163/220 (74.09%), Query Frame = 0
BLAST of HG10010690.1 vs. ExPASy TrEMBL
Match: A0A5D3BHA8 (U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001100 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 3.0e-72 Identity = 154/220 (70.00%), Postives = 165/220 (75.00%), Query Frame = 0
BLAST of HG10010690.1 vs. TAIR 10
Match: AT5G47740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10 Identity = 56/204 (27.45%), Postives = 91/204 (44.61%), Query Frame = 0
BLAST of HG10010690.1 vs. TAIR 10
Match: AT5G47740.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10 Identity = 56/206 (27.18%), Postives = 91/206 (44.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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