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HG10010136.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGAGGTTGTGTTGGGAAGACGACTAGGGCATGTCAAAGGTCTCGGTTGGGGCCCAAAGCCAAAATTGAGAAGTAATAATAGCTTGTCATCAAGTTCATCCTACGCACAAAAAGAACACGAGCAAGCAGTTGAGATTAGGATTTTAAAAGAACGACTTGAATAA ATGTATGAGGTTGTGTTGGGAAGACGACTAGGGCATGTCAAAGGTCTCGGTTGGGGCCCAAAGCCAAAATTGAGAAGTAATAATAGCTTGTCATCAAGTTCATCCTACGCACAAAAAGAACACGAGCAAGCAGTTGAGATTAGGATTTTAAAAGAACGACTTGAATAA ATGTATGAGGTTGTGTTGGGAAGACGACTAGGGCATGTCAAAGGTCTCGGTTGGGGCCCAAAGCCAAAATTGAGAAGTAATAATAGCTTGTCATCAAGTTCATCCTACGCACAAAAAGAACACGAGCAAGCAGTTGAGATTAGGATTTTAAAAGAACGACTTGAATAA MYEVVLGRRLGHVKGLGWGPKPKLRSNNSLSSSSSYAQKEHEQAVEIRILKERLE Homology
BLAST of HG10010136.1 vs. NCBI nr
Match: KAA0042154.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK26728.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 3.0e-04 Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of HG10010136.1 vs. ExPASy TrEMBL
Match: A0A5D3DT75 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00130 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.4e-04 Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of HG10010136.1 vs. ExPASy TrEMBL
Match: A0A5D3DB16 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001130 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.1e-04 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of HG10010136.1 vs. ExPASy TrEMBL
Match: A0A5A7T4Y6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3921G00160 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.1e-04 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of HG10010136.1 vs. ExPASy TrEMBL
Match: A0A5A7UKJ2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G00870 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.1e-04 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of HG10010136.1 vs. ExPASy TrEMBL
Match: A0A5A7U5R2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00320 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.1e-04 Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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