HG10006464.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006464.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	TMV resistance protein N-like
Location	Chr07: 18782834 .. 18785907 (-)
Sequence length	1038
RNA-Seq Expression	HG10006464.1
Synteny	HG10006464.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCCCATAAATGGGACCCAACCATCCAACTAGTATGCTCTGCTTCAAAAATGATGGAAACAGCTTCATGGAGCTTTGAATTTCCTCATTTACTTGTTCCAAAAGAATTTTTATGTTCCAAGTTCACATTTTTGGATCTTCAATCTTGCAACATATCAAATGCAGAATTTTTGGAAACTTTATGTAACAAGGCCCCTTTCTTATCTAATCTAATTTTGTCGGGAAACAAATTCTCTAGTTTACCTTCATGTCTCCATAAGTTAACGTCCTTATGGAATCTTGAATTAAGGAATTGCAAGCTTCTTCAAGAAATTCCAAATCTTCCCCAGAATATACAAAAAATGGATGCTACTGGTTGCGAATCGTTGGCTAGAAGTCCAGATAACATTGTGGATATAATATCAAAAAAACAGGTTCGTCTCTTTCCGTTCAATTTGTTCCTATCTTGTAAACAATCTTATGCATATGAATGTATTATTCTATAGGACCTTACATTGGGTGAGTTTTCAAGAGAGTTCTTACTAACGGGCATTGAGATACCAGAATGGTTCAGCTATAAGACTACAACAAATTTGATGAGTGCTAGCTTTCGTCACTATCCAGACATGGAAAGAACTTTGGCTGCCTGTGTTAGTTTCAAAGTGAATGGAGATTCATCTAAAAGGGAAGCCTTAATTTCATGCAATATATTCATATGCAATAGACTCCATTATTCTTTTACAAGACCATTTCTTCCATCAAAATCAGAATATATGTGGTTAGTGACAACTTCTCTAGCATGGGGCTCCATGGAGGTGAAGGATTGGAATAAAGTTTTGGTAGGGTTTGAGGTTCATGAAGCACATGATGTAACCGTAAGAAGCTGTGGTGTCCATGTCACTGAAGAGCTCCATGGGATACGAACGGATCTCAAGTGGCCGGTGGTAAATTATGCTGATTTTTATCAACTGGAGAAATTGCCAAATCTGTAAGTGAGCCTACATTATTGCTAGTTTAATTGATTGTTTACTTGTTATTTATTTACTTCTTTGGAGTGAAACTATACTAGGTCCCAAAAGGGGGAGCTGTGTGAGGGATATAGGAGTGTTTGTGGGGAGGACATTTTTTTTTGGCTTGATTTTCTTTAACTCTCTAAGCAAGGGTGATATGAAAACCCTAGCAAATTGGAATTAGAAACCCTTTTGATATGAGAATCTCTATATCTCAATCACTAAAACTCCAAATTGATTCGATTTCAACCCTAAGAATTGGGTTAGACACGGATTACGTTGAGATCATATATCTTGAGACCAAAAAAACAGGTTCTTTGGCCCAAGATTTGAACACTCCATGAAATAGGATGATCAATCTCACTTGAATGTTCTTGGTATGCAACTCAACAAGTGAATTGCAAAATTCAAGAAGCTCTCCGGGTCTAAACTTGAAAGAAGCACAAAGACCAAAACTTAATTCATCATAATCGGATAAAAACAATCTAAATGCAAGATTTTAATAGCCTCCCAATGAAAACCCAAGTGCCGCATGATAGTTCATAGTAAAATGACAAAAATACCTCTACTTAATATGTCATAAAAAGGATGAAATTTAAAAATATGAAAATTACATCAAAACTATTAAATATAATGTAACTAATAATTTGATGCCCTATACAGTTTATATCAAAAGGGTTAGTGGATTCCTTGATAGATTGAGTAATTTATCCGATGTATGTATTAAGGAGAACAAAGTCTCTACAAATGTTCAAAATAGTATGATATTGTGTATTTTATTATTATTATTTTTTGGATAAGAAACCATTTTAATGAATGAAAAATCCAAAGAATACAAATGGGAAGAACCCAAAAGGAACCATTTTAATGACTTGGACACTTTGGGCATAAGCTTTCATTGGCTTTATTTTTTGTTCTACTCAAAAGATCTCGTACCGTATCAATAGAGTTGTTGTCTCTTACTTAGATATTCAATGATCTTTTCCTTTCCTAGAGCTTTCATCGCACTTCGAACAATGTGAAAATAAACTGAAGTTTTAGAGAAGCATTATGATGTAGGGAGAATTAGGGAAATTCCTTGATTAATCCTCTTTTTATTATCTTTTTGTATTTTTGTATTTTATTTTTGCTTTCTAATTTCCTACAAATAGAGGGGCTTCCCTCATGTATTCTACAACTTTGATTTCATAATAAAGAATTGAGTTAGATTCTTGGAAAATTCTTTGAGGCTACGGTAGGCTACACCACACTAGCCAAAGCTCAAGTGAAATATTTAAACAAGAAATGAAACATGGAGAGAAGCTCTTGTTGCTGTTTCTCGTTCCATCTTGATAGGTTCTATGAAAATAGTATCTAGACATTAGGAACAACAACAAAGAGCAAACTGTAGAGTTTTTAACTAAATATTAGAAGAGATGCAAGCTCACATCAAAAAGAGCTTTTGGTTTTGGAATCTTACGTTCTTTTTGTATGAATGCTCATTTTCATTGTGTATGTCTGTATGATATGATGTTCTTTAATGGCATAGGGACGATCATATTGAGGCTTCTTTTGTCAAACGCTTTTTCCAAGAAATCTGCTGCAAGTTTAATTGCAAAGCAATGCTACATGCAGGAAGTTATAATCCAGAAACAATTGATCCCAAGATTCAACCTATGATTTTTCCATTGCATGTAACATATAATGGTAATACAGTGATACGTGGAATGGAAGGCATGGCAGACACTGCACTTGCAAACTCTTTACGTAACAAATTTAATTGGATGAAAGACCAGTCTTGGGGATTAGCTTTAGATAATTCTACAAGCTTTTACTTGGTCGGAGGAAAAGGGCCCTGGCGCCAAAGCTTATCCTATTCATCCCGACGTCAGCATGGAGATGGTGAAACTCAAAGAGGAACCAATATTACAAGGGATAAAATATTCTCCAAAAACTATCTCCTAACCCTTGAAACTGAGAAGAGTTCCGATATATATGGATGGTTGAATGCACAGCCTTGGATTAGCGCACTTTCTGCCCGTTCTTTTGGAAAAAATCGTCTCTTTATTATTATTAGGTTCGATATATCCTCATGGCAGTAG

mRNA sequence

ATGGACCTTACATTGGGTGAGTTTTCAAGAGAGTTCTTACTAACGGGCATTGAGATACCAGAATGGTTCAGCTATAAGACTACAACAAATTTGATGAGTGCTAGCTTTCGTCACTATCCAGACATGGAAAGAACTTTGGCTGCCTGTGTTAGTTTCAAAGTGAATGGAGATTCATCTAAAAGGGAAGCCTTAATTTCATGCAATATATTCATATGCAATAGACTCCATTATTCTTTTACAAGACCATTTCTTCCATCAAAATCAGAATATATGTGGTTAGTGACAACTTCTCTAGCATGGGGCTCCATGGAGGTGAAGGATTGGAATAAAGTTTTGGTAGGGTTTGAGGTTCATGAAGCACATGATGTAACCGTAAGAAGCTGTGGTGTCCATGTCACTGAAGAGCTCCATGGGATACGAACGGATCTCAAGTGGCCGGTGGTAAATTATGCTGATTTTTATCAACTGGAGAAATTGCCAAATCTGGACGATCATATTGAGGCTTCTTTTGTCAAACGCTTTTTCCAAGAAATCTGCTGCAAGTTTAATTGCAAAGCAATGCTACATGCAGGAAGTTATAATCCAGAAACAATTGATCCCAAGATTCAACCTATGATTTTTCCATTGCATGTAACATATAATGGTAATACAGTGATACGTGGAATGGAAGGCATGGCAGACACTGCACTTGCAAACTCTTTACGTAACAAATTTAATTGGATGAAAGACCAGTCTTGGGGATTAGCTTTAGATAATTCTACAAGCTTTTACTTGGTCGGAGGAAAAGGGCCCTGGCGCCAAAGCTTATCCTATTCATCCCGACGTCAGCATGGAGATGGTGAAACTCAAAGAGGAACCAATATTACAAGGGATAAAATATTCTCCAAAAACTATCTCCTAACCCTTGAAACTGAGAAGAGTTCCGATATATATGGATGGTTGAATGCACAGCCTTGGATTAGCGCACTTTCTGCCCGTTCTTTTGGAAAAAATCGTCTCTTTATTATTATTAGGTTCGATATATCCTCATGGCAGTAG

Coding sequence (CDS)

ATGGACCTTACATTGGGTGAGTTTTCAAGAGAGTTCTTACTAACGGGCATTGAGATACCAGAATGGTTCAGCTATAAGACTACAACAAATTTGATGAGTGCTAGCTTTCGTCACTATCCAGACATGGAAAGAACTTTGGCTGCCTGTGTTAGTTTCAAAGTGAATGGAGATTCATCTAAAAGGGAAGCCTTAATTTCATGCAATATATTCATATGCAATAGACTCCATTATTCTTTTACAAGACCATTTCTTCCATCAAAATCAGAATATATGTGGTTAGTGACAACTTCTCTAGCATGGGGCTCCATGGAGGTGAAGGATTGGAATAAAGTTTTGGTAGGGTTTGAGGTTCATGAAGCACATGATGTAACCGTAAGAAGCTGTGGTGTCCATGTCACTGAAGAGCTCCATGGGATACGAACGGATCTCAAGTGGCCGGTGGTAAATTATGCTGATTTTTATCAACTGGAGAAATTGCCAAATCTGGACGATCATATTGAGGCTTCTTTTGTCAAACGCTTTTTCCAAGAAATCTGCTGCAAGTTTAATTGCAAAGCAATGCTACATGCAGGAAGTTATAATCCAGAAACAATTGATCCCAAGATTCAACCTATGATTTTTCCATTGCATGTAACATATAATGGTAATACAGTGATACGTGGAATGGAAGGCATGGCAGACACTGCACTTGCAAACTCTTTACGTAACAAATTTAATTGGATGAAAGACCAGTCTTGGGGATTAGCTTTAGATAATTCTACAAGCTTTTACTTGGTCGGAGGAAAAGGGCCCTGGCGCCAAAGCTTATCCTATTCATCCCGACGTCAGCATGGAGATGGTGAAACTCAAAGAGGAACCAATATTACAAGGGATAAAATATTCTCCAAAAACTATCTCCTAACCCTTGAAACTGAGAAGAGTTCCGATATATATGGATGGTTGAATGCACAGCCTTGGATTAGCGCACTTTCTGCCCGTTCTTTTGGAAAAAATCGTCTCTTTATTATTATTAGGTTCGATATATCCTCATGGCAGTAG

Protein sequence

MDLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKREALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAHDVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEICCKFNCKAMLHAGSYNPETIDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNKFNWMKDQSWGLALDNSTSFYLVGGKGPWRQSLSYSSRRQHGDGETQRGTNITRDKIFSKNYLLTLETEKSSDIYGWLNAQPWISALSARSFGKNRLFIIIRFDISSWQ

Homology

[Close]

BLAST of HG10006464.1 vs. NCBI nr
Match: XP_038877835.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida])

HSP 1 Score: 469.9 bits (1208), Expect = 1.8e-128
Identity = 246/354 (69.49%), Postives = 275/354 (77.68%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SREFLLT IEIPEWF YKTTTNL+SASFRHYPDMERTLAACV+FKVNGDSSKR
Sbjct: 1002 DLTLGEISREFLLTDIEIPEWFGYKTTTNLISASFRHYPDMERTLAACVNFKVNGDSSKR 1061

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             AL+SC+IFICNRLH SFTRPFLPSKSEYMWLVTTSLAWGSMEV+DWNKVLV FEVHE H
Sbjct: 1062 VALVSCSIFICNRLHCSFTRPFLPSKSEYMWLVTTSLAWGSMEVQDWNKVLVRFEVHEEH 1121

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               +VT+RS G+HVTEELHG++TDLKWPVVNYADFYQ+EKL NLD  IE   VKRFFQEI
Sbjct: 1122 VEVNVTIRSYGIHVTEELHGMQTDLKWPVVNYADFYQMEKLQNLD--IEDVLVKRFFQEI 1181

Query: 182  CCKFNCKAMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNK 241
             CK +CKAMLHAGSY+PE  ID  IQPMIFPLHVTYNG T I GMEGM DTALANSL NK
Sbjct: 1182 SCKLSCKAMLHAGSYDPEAIIDSNIQPMIFPLHVTYNGATAICGMEGMGDTALANSLCNK 1241

Query: 242  FNWMKDQSWGLALDNSTSFYLVGGKGPWRQSLSYSSRRQHGDGETQRGTNITRDKIFSKN 301
            F W+KD  +  ALD  TSF+ V G  P  +SL +S   + GDGE  RGT++    I SK 
Sbjct: 1242 FKWLKDHPYREALDIPTSFFEVKGGDP--RSLFWSFPHKRGDGE--RGTSLKSHTISSKR 1301

Query: 302  YLLT---LETEKSSDIYGWL--NAQPWIS--ALSARSFGKNRLFIIIRFDISSW 345
            YL+T   L+  + SD Y W+    + WIS     + SFG+N  F+I R D S W
Sbjct: 1302 YLITFRNLDDRECSDAYEWVITAKRSWISIHLAGSDSFGRNYSFLIERVDTSLW 1349

[Close]

BLAST of HG10006464.1 vs. NCBI nr
Match: KAA0047972.1 (TMV resistance protein N-like [Cucumis melo var. makuwa])

HSP 1 Score: 432.2 bits (1110), Expect = 4.3e-117
Identity = 226/354 (63.84%), Postives = 263/354 (74.29%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SREFLLTGIEIPEWFSYKT +NL+SASF HYPDMERTLAACVSFKV G+SS  
Sbjct: 1004 DLTLGEISREFLLTGIEIPEWFSYKTASNLVSASFCHYPDMERTLAACVSFKVKGNSSAS 1063

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             A ISCNIFICN+LH+SF+RPFLPSKSEY+WLVTTSLAWGS+EV DWNKVLV FEVHEAH
Sbjct: 1064 GARISCNIFICNKLHFSFSRPFLPSKSEYIWLVTTSLAWGSVEVNDWNKVLVWFEVHEAH 1123

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL  LD  IE   +K F + +
Sbjct: 1124 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQRLD--IEDLLLKSFLESV 1183

Query: 182  CCKFNCKAMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNK 241
             C  N KAMLHAG+Y+PE  ID  IQPMIFPLHVTYNG TVI GMEGM DT LANSL NK
Sbjct: 1184 SCWSNSKAMLHAGNYDPEAIIDSNIQPMIFPLHVTYNGETVICGMEGMGDTTLANSLCNK 1243

Query: 242  FNWMKDQSWGL-------ALDNSTSFYLVGGKGPWRQSLSYSS-RRQHGDGETQRGTNIT 301
            F WMK+  + +       ALDNSTS + + G+   R S S+++  R+ GDG  +RGTNIT
Sbjct: 1244 FKWMKEHLFEIKEHHYSEALDNSTSIFHIRGRELQRFSWSWAAHHRKRGDG--KRGTNIT 1303

Query: 302  RDKIFSKNYLLTL-ETEKSSDIYGWLNAQPWISALSARSFGKNRLFIIIRFDIS 343
               I SK YL+   E E  +DI+ W+  Q WI    + +   +  F+I R DIS
Sbjct: 1304 THTISSKCYLMLFHEAENCNDIFDWVGTQRWIKTSGSSNGRGDVQFLIKRVDIS 1353

[Close]

BLAST of HG10006464.1 vs. NCBI nr
Match: TYK18295.1 (TMV resistance protein N-like [Cucumis melo var. makuwa])

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-116
Identity = 224/353 (63.46%), Postives = 259/353 (73.37%), Query Frame = 0


Query: 2   DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
           DL LGE SREFLL G+EIPEWFSYKT +NL+SASFRHYPDMERTLAA VSFKVNGDS  R
Sbjct: 197 DLALGEISREFLLMGVEIPEWFSYKTASNLVSASFRHYPDMERTLAAGVSFKVNGDSYAR 256

Query: 62  EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
            A ISCNIFI N+LH+SF+RPFLPSKSEYMWLVTTSLAWGS+EV DWNKVLV FEVHEAH
Sbjct: 257 GARISCNIFIFNKLHFSFSRPFLPSKSEYMWLVTTSLAWGSVEVNDWNKVLVWFEVHEAH 316

Query: 122 ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
              + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL +LD  IE   +K  F+ +
Sbjct: 317 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQSLD--IEDLLLKSIFETV 376

Query: 182 CCKFNCKAMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNK 241
            C  N KAMLHAG+Y+PE  ID  IQPMIFPLHVTYNG TVI GMEGM DT LANSL NK
Sbjct: 377 SCWSNSKAMLHAGNYDPEAIIDSNIQPMIFPLHVTYNGETVICGMEGMGDTTLANSLCNK 436

Query: 242 FNWMKDQSWGL-------ALDNSTSFYLVGGKGPWRQSLSYSSRRQHGDGETQRGTNITR 301
           F WMKD  +G+       ALDNSTSF+ + G+   + S S++  R+ GD    RGTNI  
Sbjct: 437 FKWMKDHLFGIKGHHYSEALDNSTSFFHIRGRQLQKFSWSWAHHRKRGD--VNRGTNIIT 496

Query: 302 DKIFSKNYLLTL-ETEKSSDIYGWLNAQPWISALSARSFGKNRLFIIIRFDIS 343
             I SK YL+   E E  +DI+ W+  Q WI    + +   +  F+I   DIS
Sbjct: 497 HTISSKCYLMLFHEAENCNDIFDWVGTQRWIKTSGSSNGRGDVQFLIKSVDIS 545

[Close]

BLAST of HG10006464.1 vs. NCBI nr
Match: TYK18305.1 (TMV resistance protein N-like [Cucumis melo var. makuwa])

HSP 1 Score: 427.9 bits (1099), Expect = 8.1e-116
Identity = 223/354 (62.99%), Postives = 263/354 (74.29%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SR+FLLTGIEIPEWFSYKT +NL+SASF HYPD+ERTLAACVSFKV G+SS  
Sbjct: 1004 DLTLGEISRDFLLTGIEIPEWFSYKTASNLVSASFCHYPDIERTLAACVSFKVKGNSSAS 1063

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             A ISCNIFICN+LH+SF+RPFLPSKSEY+WLVTTSLAWGS+EV DWNKVLV FEVHEAH
Sbjct: 1064 GARISCNIFICNKLHFSFSRPFLPSKSEYIWLVTTSLAWGSVEVNDWNKVLVWFEVHEAH 1123

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL  LD  IE   +K F + +
Sbjct: 1124 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQRLD--IEDLLLKSFLESV 1183

Query: 182  CCKFNCKAMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNK 241
             C  N KAMLHAG+Y+PE  ID  IQP+IFPLHVTYNG TVI GMEGM DT LANSL NK
Sbjct: 1184 SCWSNSKAMLHAGNYDPEAIIDSNIQPVIFPLHVTYNGETVICGMEGMGDTTLANSLCNK 1243

Query: 242  FNWMKDQSWGL-------ALDNSTSFYLVGGKGPWRQSLSYSS-RRQHGDGETQRGTNIT 301
            F WMK+  + +       ALDNSTS + + G+   R S S+++  R+ GDG  +RGTNIT
Sbjct: 1244 FKWMKEHLFEIKEHHYSEALDNSTSIFHIRGRELQRFSWSWAAHHRKRGDG--KRGTNIT 1303

Query: 302  RDKIFSKNYLLTL-ETEKSSDIYGWLNAQPWISALSARSFGKNRLFIIIRFDIS 343
               I SK YL+   E E  +DI+ W+  Q WI    + +   +  F+I R DIS
Sbjct: 1304 THTISSKCYLMLFHEAENCNDIFDWVGTQRWIKTSGSSNGRGDVQFLIKRVDIS 1353

[Close]

BLAST of HG10006464.1 vs. NCBI nr
Match: XP_008455151.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 411.8 bits (1057), Expect = 6.0e-111
Identity = 227/347 (65.42%), Postives = 254/347 (73.20%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SREFLLTGIEIPEWFSYKTT+NL++ASFRHYPDMERTLAACVSFKVNGDSSKR
Sbjct: 1030 DLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFRHYPDMERTLAACVSFKVNGDSSKR 1089

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             A ISC+IFIC++LH SF+RPFLPSKSEYMWLVTTSLAWGSMEV DWNKVLV FEVHEAH
Sbjct: 1090 GAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTSLAWGSMEVNDWNKVLVWFEVHEAH 1149

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL +LD  IE   +K F + +
Sbjct: 1150 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQSLD--IEDLLLKSFLETV 1209

Query: 182  CCKFNCK-AMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRN 241
             C  N K AMLHAG+Y+PE  ID  IQPMIFPLHVT N  T I G  GM  TALANSL N
Sbjct: 1210 SCLSNSKAAMLHAGNYDPEAIIDSNIQPMIFPLHVTNNDGTYICG--GMGGTALANSLCN 1269

Query: 242  KFNWMKDQSWGLALDNSTSFYLVGGKGPWRQSLSYS-----SRRQHGDGETQRGTNITRD 301
            KF  M+ Q  G ALDNSTSF+ +      RQ LSYS       R+ GDGE  RGTNIT  
Sbjct: 1270 KFKGMEGQC-GEALDNSTSFFHI----KRRQLLSYSWSPAVHHRKCGDGE--RGTNITTH 1329

Query: 302  KIFSKNYLLTLETEKS-SDIYGWLNAQPWISALSARSFGKNRLFIII 338
             I SK YL+ L   KS  D++ W     WI A      G+    I+I
Sbjct: 1330 TISSKRYLILLREAKSYQDVHDWFYTHCWIKASYCSYDGRGDGVILI 1365

[Close]

BLAST of HG10006464.1 vs. ExPASy TrEMBL
Match: A0A5A7TWU2 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00320 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 2.1e-117
Identity = 226/354 (63.84%), Postives = 263/354 (74.29%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SREFLLTGIEIPEWFSYKT +NL+SASF HYPDMERTLAACVSFKV G+SS  
Sbjct: 1004 DLTLGEISREFLLTGIEIPEWFSYKTASNLVSASFCHYPDMERTLAACVSFKVKGNSSAS 1063

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             A ISCNIFICN+LH+SF+RPFLPSKSEY+WLVTTSLAWGS+EV DWNKVLV FEVHEAH
Sbjct: 1064 GARISCNIFICNKLHFSFSRPFLPSKSEYIWLVTTSLAWGSVEVNDWNKVLVWFEVHEAH 1123

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL  LD  IE   +K F + +
Sbjct: 1124 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQRLD--IEDLLLKSFLESV 1183

Query: 182  CCKFNCKAMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNK 241
             C  N KAMLHAG+Y+PE  ID  IQPMIFPLHVTYNG TVI GMEGM DT LANSL NK
Sbjct: 1184 SCWSNSKAMLHAGNYDPEAIIDSNIQPMIFPLHVTYNGETVICGMEGMGDTTLANSLCNK 1243

Query: 242  FNWMKDQSWGL-------ALDNSTSFYLVGGKGPWRQSLSYSS-RRQHGDGETQRGTNIT 301
            F WMK+  + +       ALDNSTS + + G+   R S S+++  R+ GDG  +RGTNIT
Sbjct: 1244 FKWMKEHLFEIKEHHYSEALDNSTSIFHIRGRELQRFSWSWAAHHRKRGDG--KRGTNIT 1303

Query: 302  RDKIFSKNYLLTL-ETEKSSDIYGWLNAQPWISALSARSFGKNRLFIIIRFDIS 343
               I SK YL+   E E  +DI+ W+  Q WI    + +   +  F+I R DIS
Sbjct: 1304 THTISSKCYLMLFHEAENCNDIFDWVGTQRWIKTSGSSNGRGDVQFLIKRVDIS 1353

[Close]

BLAST of HG10006464.1 vs. ExPASy TrEMBL
Match: A0A5D3D427 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00010 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.9e-117
Identity = 224/353 (63.46%), Postives = 259/353 (73.37%), Query Frame = 0


Query: 2   DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
           DL LGE SREFLL G+EIPEWFSYKT +NL+SASFRHYPDMERTLAA VSFKVNGDS  R
Sbjct: 197 DLALGEISREFLLMGVEIPEWFSYKTASNLVSASFRHYPDMERTLAAGVSFKVNGDSYAR 256

Query: 62  EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
            A ISCNIFI N+LH+SF+RPFLPSKSEYMWLVTTSLAWGS+EV DWNKVLV FEVHEAH
Sbjct: 257 GARISCNIFIFNKLHFSFSRPFLPSKSEYMWLVTTSLAWGSVEVNDWNKVLVWFEVHEAH 316

Query: 122 ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
              + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL +LD  IE   +K  F+ +
Sbjct: 317 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQSLD--IEDLLLKSIFETV 376

Query: 182 CCKFNCKAMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNK 241
            C  N KAMLHAG+Y+PE  ID  IQPMIFPLHVTYNG TVI GMEGM DT LANSL NK
Sbjct: 377 SCWSNSKAMLHAGNYDPEAIIDSNIQPMIFPLHVTYNGETVICGMEGMGDTTLANSLCNK 436

Query: 242 FNWMKDQSWGL-------ALDNSTSFYLVGGKGPWRQSLSYSSRRQHGDGETQRGTNITR 301
           F WMKD  +G+       ALDNSTSF+ + G+   + S S++  R+ GD    RGTNI  
Sbjct: 437 FKWMKDHLFGIKGHHYSEALDNSTSFFHIRGRQLQKFSWSWAHHRKRGD--VNRGTNIIT 496

Query: 302 DKIFSKNYLLTL-ETEKSSDIYGWLNAQPWISALSARSFGKNRLFIIIRFDIS 343
             I SK YL+   E E  +DI+ W+  Q WI    + +   +  F+I   DIS
Sbjct: 497 HTISSKCYLMLFHEAENCNDIFDWVGTQRWIKTSGSSNGRGDVQFLIKSVDIS 545

[Close]

BLAST of HG10006464.1 vs. ExPASy TrEMBL
Match: A0A5D3D437 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00140 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.9e-116
Identity = 223/354 (62.99%), Postives = 263/354 (74.29%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SR+FLLTGIEIPEWFSYKT +NL+SASF HYPD+ERTLAACVSFKV G+SS  
Sbjct: 1004 DLTLGEISRDFLLTGIEIPEWFSYKTASNLVSASFCHYPDIERTLAACVSFKVKGNSSAS 1063

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             A ISCNIFICN+LH+SF+RPFLPSKSEY+WLVTTSLAWGS+EV DWNKVLV FEVHEAH
Sbjct: 1064 GARISCNIFICNKLHFSFSRPFLPSKSEYIWLVTTSLAWGSVEVNDWNKVLVWFEVHEAH 1123

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL  LD  IE   +K F + +
Sbjct: 1124 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQRLD--IEDLLLKSFLESV 1183

Query: 182  CCKFNCKAMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRNK 241
             C  N KAMLHAG+Y+PE  ID  IQP+IFPLHVTYNG TVI GMEGM DT LANSL NK
Sbjct: 1184 SCWSNSKAMLHAGNYDPEAIIDSNIQPVIFPLHVTYNGETVICGMEGMGDTTLANSLCNK 1243

Query: 242  FNWMKDQSWGL-------ALDNSTSFYLVGGKGPWRQSLSYSS-RRQHGDGETQRGTNIT 301
            F WMK+  + +       ALDNSTS + + G+   R S S+++  R+ GDG  +RGTNIT
Sbjct: 1244 FKWMKEHLFEIKEHHYSEALDNSTSIFHIRGRELQRFSWSWAAHHRKRGDG--KRGTNIT 1303

Query: 302  RDKIFSKNYLLTL-ETEKSSDIYGWLNAQPWISALSARSFGKNRLFIIIRFDIS 343
               I SK YL+   E E  +DI+ W+  Q WI    + +   +  F+I R DIS
Sbjct: 1304 THTISSKCYLMLFHEAENCNDIFDWVGTQRWIKTSGSSNGRGDVQFLIKRVDIS 1353

[Close]

BLAST of HG10006464.1 vs. ExPASy TrEMBL
Match: A0A5A7V617 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002010 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.9e-111
Identity = 227/347 (65.42%), Postives = 254/347 (73.20%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SREFLLTGIEIPEWFSYKTT+NL++ASFRHYPDMERTLAACVSFKVNGDSSKR
Sbjct: 1155 DLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFRHYPDMERTLAACVSFKVNGDSSKR 1214

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             A ISC+IFIC++LH SF+RPFLPSKSEYMWLVTTSLAWGSMEV DWNKVLV FEVHEAH
Sbjct: 1215 GAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTSLAWGSMEVNDWNKVLVWFEVHEAH 1274

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL +LD  IE   +K F + +
Sbjct: 1275 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQSLD--IEDLLLKSFLETV 1334

Query: 182  CCKFNCK-AMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRN 241
             C  N K AMLHAG+Y+PE  ID  IQPMIFPLHVT N  T I G  GM  TALANSL N
Sbjct: 1335 SCLSNSKAAMLHAGNYDPEAIIDSNIQPMIFPLHVTNNDGTYICG--GMGGTALANSLCN 1394

Query: 242  KFNWMKDQSWGLALDNSTSFYLVGGKGPWRQSLSYS-----SRRQHGDGETQRGTNITRD 301
            KF  M+ Q  G ALDNSTSF+ +      RQ LSYS       R+ GDGE  RGTNIT  
Sbjct: 1395 KFKGMEGQC-GEALDNSTSFFHI----KRRQLLSYSWSPAVHHRKCGDGE--RGTNITTH 1454

Query: 302  KIFSKNYLLTLETEKS-SDIYGWLNAQPWISALSARSFGKNRLFIII 338
             I SK YL+ L   KS  D++ W     WI A      G+    I+I
Sbjct: 1455 TISSKRYLILLREAKSYQDVHDWFYTHCWIKASYCSYDGRGDGVILI 1490

[Close]

BLAST of HG10006464.1 vs. ExPASy TrEMBL
Match: A0A1S3C088 (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.9e-111
Identity = 227/347 (65.42%), Postives = 254/347 (73.20%), Query Frame = 0


Query: 2    DLTLGEFSREFLLTGIEIPEWFSYKTTTNLMSASFRHYPDMERTLAACVSFKVNGDSSKR 61
            DLTLGE SREFLLTGIEIPEWFSYKTT+NL++ASFRHYPDMERTLAACVSFKVNGDSSKR
Sbjct: 1030 DLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFRHYPDMERTLAACVSFKVNGDSSKR 1089

Query: 62   EALISCNIFICNRLHYSFTRPFLPSKSEYMWLVTTSLAWGSMEVKDWNKVLVGFEVHEAH 121
             A ISC+IFIC++LH SF+RPFLPSKSEYMWLVTTSLAWGSMEV DWNKVLV FEVHEAH
Sbjct: 1090 GAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTSLAWGSMEVNDWNKVLVWFEVHEAH 1149

Query: 122  ---DVTVRSCGVHVTEELHGIRTDLKWPVVNYADFYQLEKLPNLDDHIEASFVKRFFQEI 181
               + T+  CGVHVTEELHGI+ D+KWP+VNYADFYQLEKL +LD  IE   +K F + +
Sbjct: 1150 SEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFYQLEKLQSLD--IEDLLLKSFLETV 1209

Query: 182  CCKFNCK-AMLHAGSYNPET-IDPKIQPMIFPLHVTYNGNTVIRGMEGMADTALANSLRN 241
             C  N K AMLHAG+Y+PE  ID  IQPMIFPLHVT N  T I G  GM  TALANSL N
Sbjct: 1210 SCLSNSKAAMLHAGNYDPEAIIDSNIQPMIFPLHVTNNDGTYICG--GMGGTALANSLCN 1269

Query: 242  KFNWMKDQSWGLALDNSTSFYLVGGKGPWRQSLSYS-----SRRQHGDGETQRGTNITRD 301
            KF  M+ Q  G ALDNSTSF+ +      RQ LSYS       R+ GDGE  RGTNIT  
Sbjct: 1270 KFKGMEGQC-GEALDNSTSFFHI----KRRQLLSYSWSPAVHHRKCGDGE--RGTNITTH 1329

Query: 302  KIFSKNYLLTLETEKS-SDIYGWLNAQPWISALSARSFGKNRLFIII 338
             I SK YL+ L   KS  D++ W     WI A      G+    I+I
Sbjct: 1330 TISSKRYLILLREAKSYQDVHDWFYTHCWIKASYCSYDGRGDGVILI 1365

The following BLAST results are available for this feature:

BLAST of HG10006464.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877835.1	1.8e-128	69.49	LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]	[more]
KAA0047972.1	4.3e-117	63.84	TMV resistance protein N-like [Cucumis melo var. makuwa]	[more]
TYK18295.1	1.6e-116	63.46	TMV resistance protein N-like [Cucumis melo var. makuwa]	[more]
TYK18305.1	8.1e-116	62.99	TMV resistance protein N-like [Cucumis melo var. makuwa]	[more]
XP_008455151.1	6.0e-111	65.42	PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo]	[more]

BLAST of HG10006464.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10006464.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWU2	2.1e-117	63.84	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3D427	7.9e-117	63.46	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5D3D437	3.9e-116	62.99	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7V617	2.9e-111	65.42	TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C088	2.9e-111	65.42	TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388...	[more]

BLAST of HG10006464.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10006464	HG10006464	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10006464.1-cds	HG10006464.1-cds-Chr07:18782834..18783386	CDS
HG10006464.1-cds	HG10006464.1-cds-Chr07:18784937..18785418	CDS
HG10006464.1-cds	HG10006464.1-cds-Chr07:18785905..18785907	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10006464.1	HG10006464.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity