HG10006397.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006397.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	C2 domain-containing protein
Location	Chr07: 18078442 .. 18081285 (-)
Sequence length	633
RNA-Seq Expression	HG10006397.1
Synteny	HG10006397.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGATCGATTACAGAGCCTTCAACATAAACATCACCTGCGCGGAAGGAATCAAAGGAGTTTTAAGTTTTACAAATTTTTTCCACAAATCAAAGGTCTACGCGGCGGTTTCTGTTGTCGGAATCTCTCCGGCCGCCCAAAAAACGCCGCTAGCGAAGTACTTCGGTGAAAATCCGGTGTGGAATTTTCCAATGAGATTCTATTTGGAGGAATTGAAGCTACAAGAAAATGCCCTAACTCTGAAGATTCAACTGAGGCGAAAGCGAACATTTGGTGGAGATGAAGACATTGCTGAAGCTTTGATTCCGTTGAGAAATCTTTTAAATGGCACTGAGAATGTAATGGATGAAAATTACAGCTCCTCTTTTCTGCTCTCGAAGTCCGGCGGCCGCCGTGGTTTGGTGTATTTTTCGTATCACTTCAGCCGGGCTTACGGTGCATCCGCGGCAGGTGACGACGGAGGCGTGGTTGCTCCGCCCTCGGTCTTGGAACGTCCCCGCCTTTCGCACCGCTGTGTGTGTAGTTTTGGGTATATTGAAAGTTTGGAAATTAGTACCCTCATTTGTATAGAGCCAAAAATATTATTGATTAGATTTAATGATGTAATATTAAATTGGTTTCAAAAAAATAAGATCTAAATAAAAAAAAACATATATCAAAATCCGAGGAAGAAAAAAATAGAGTAAATTCAAATTTAAGGAAGGGCCAAAATTTTAGTAAAAATACATTTTTCAGATTTAAATGCGGTTGGTGAAAATATAGTTACACCGTGTTTGGAATATTACTCACGACATTGTGGTATTTTGCTATAAATCTTATGAAACTTGTTTCTTGTAATTTCTCGGAATGGAACTATAAAAATTATTATATATAATTTTTTTTTTTTTTGTTAAGTAATGAATCCAATTCAATTCAACTATGAAATATTTTGGTTAGGTTGGTTTAAGTTGTTTGAGTAATTTGTTTGAATTTTTATTTAAGAAAAAGGTAAATATTAATATGTAAAACATCTCTATATTTATTTTCGAATAATGAAATAAGTCAACTCAATTTTGATGTTACATTTGAAATAATAAACAAAATTAGTTGTGGGAGAATAATTAATTTAAAATAATATTTAAATTGAATAAATTAAAATAAATATATGTATTCATAATTTTATCATAAGTAAAAAAGTACCTTAAAAAATATTGATATAAGATAATTGAAATAATCTAAGTAAAGTCATGAGCCAACCCGTTAGAGTGATTTTTTGGGCTAAAGGACAAAATCAACATTCTTTCTTTCTTTTTTTCAATGAAAGTTGTGTTTCTTATAAAAAATAAATAAATAAATAAGTGATAAAATCAACATATCGAAGAAGAGGAAGCTACTAGGCTAAGAAGATGACAATAAACAAACAAGCTATCGTGCCAAGAGGATGAAATATGCCTAAGAAAAAAGGCTCATTTGACCTTGCATGCTTGACCTCGACCAAGATTAAGGCCTAGTCCACCATATCATGCATCCCATGCATGATATGAATTAACATGGGCCAAAAGAAGAGGGTTGACTTGGCCCAAAGCCAAATCAGCCCACTCGATTTCGACATTGACCAAAGCCAAGCCCATTGAATCATGCCTTTTCGCATAATGTTGTCCTAGAAGGAAAGATAATATATCGACATTTATGAGAGAATCCTAGGAAAATAAGGATTCTATCATGTAACCCTATAAATAAGGAATGAATGATGCAAAAGAGGTAAGTGAACTCTCATCCAAAACTATAACAAATCTCCAAACTACTTAGCTTAAGCATCAGAGTGTGTGTGGCCTACACCACACCAATGTGTAATTCTTGCTAACTTGTAGGTGATCTCCCTCCCCTAAAACCTCCCCTAAAATATAAATTTGTCGTTGTTGCCCCTTTGAAGTTAGGATCCTTCACCTATCTAAAATTTTGCGTCAACATAACCTAACCCATTAAATATCTATTCATTTGAACCCAACCTAACCAATCCATATAAATTTGACTTAAGTTGATCGAATTTTCAGTCGTTGAATTTTCTAAACAACTTATCTCACCTATTAATTTTTTAGTTTTGGTGTTTACTTTCCATGAGTGTTTTCAAAATCAAAACCAAATTTTGAAGTCCGAAAGAAAAAAAAATCACATACTAAAAGATAAAACAATTTTGTAAAACCATAATTAAGAATGGTGAGAAAACAAACACAATCTTAAAAACAAAATAATTAATTATCCAACGCTATCTAACTTTTTAGTTTTGAACGTTAAAAGAAAAGTTCTACGATTACAAGAAAAAAAAATATAACCCATTTGTTTTTTCCTTTTTCAAATTTTTGAATGTTAATTACAATACCACAATGAGCATATTGATAATTTAGAAGAAGGCTTGAGCTTCAAATAAAATTGATATTTTATTAAGATGTTCAAAAATAACAATTAGTTGACCCTTAAACATAAGAAACAGTTGCAAATATAACAATCAGATTCAAAATATTAACATATATAACAACATTTAAATATAGCAAAGTCTATCAATGATAAACTTCTATTGATGATAGACTTTTATGGTTTAGGTGGCCTATCACTAATAAACTTTGCTATATTTGTAATTTTTTAAAAATATTGCTATACACTCAATAATTATCCTTAAAATTGTTACTCGCTATAATTATGCCCTAAACCTAACAAAGATATTGAATTTGGATTCATTCGAATTTCAGGCCCAACATTTGCATTTGAATTTGTTTCTCCGTCCTGTGTTCGTGCAGCTTCATGATTTGGTGCAGTACCTATCTTTTGGTTTTGGTGTATTCTCACTTGTTGGATCTCAAGTTTAA

mRNA sequence

ATGCCGATCGATTACAGAGCCTTCAACATAAACATCACCTGCGCGGAAGGAATCAAAGGAGTTTTAAGTTTTACAAATTTTTTCCACAAATCAAAGGTCTACGCGGCGGTTTCTGTTGTCGGAATCTCTCCGGCCGCCCAAAAAACGCCGCTAGCGAAGTACTTCGGTGAAAATCCGGTGTGGAATTTTCCAATGAGATTCTATTTGGAGGAATTGAAGCTACAAGAAAATGCCCTAACTCTGAAGATTCAACTGAGGCGAAAGCGAACATTTGGTGGAGATGAAGACATTGCTGAAGCTTTGATTCCGTTGAGAAATCTTTTAAATGGCACTGAGAATGTAATGGATGAAAATTACAGCTCCTCTTTTCTGCTCTCGAAGTCCGGCGGCCGCCGTGGTTTGGTGTATTTTTCGTATCACTTCAGCCGGGCTTACGGTGCATCCGCGGCAGGTGACGACGGAGGCGTGGTTGCTCCGCCCTCGGTCTTGGAACGTCCCCGCCTTTCGCACCGCTGTGCCCAACATTTGCATTTGAATTTGTTTCTCCGTCCTGTGTTCGTGCAGCTTCATGATTTGGTGCAGTACCTATCTTTTGGTTTTGGTGTATTCTCACTTGTTGGATCTCAAGTTTAA

Coding sequence (CDS)

ATGCCGATCGATTACAGAGCCTTCAACATAAACATCACCTGCGCGGAAGGAATCAAAGGAGTTTTAAGTTTTACAAATTTTTTCCACAAATCAAAGGTCTACGCGGCGGTTTCTGTTGTCGGAATCTCTCCGGCCGCCCAAAAAACGCCGCTAGCGAAGTACTTCGGTGAAAATCCGGTGTGGAATTTTCCAATGAGATTCTATTTGGAGGAATTGAAGCTACAAGAAAATGCCCTAACTCTGAAGATTCAACTGAGGCGAAAGCGAACATTTGGTGGAGATGAAGACATTGCTGAAGCTTTGATTCCGTTGAGAAATCTTTTAAATGGCACTGAGAATGTAATGGATGAAAATTACAGCTCCTCTTTTCTGCTCTCGAAGTCCGGCGGCCGCCGTGGTTTGGTGTATTTTTCGTATCACTTCAGCCGGGCTTACGGTGCATCCGCGGCAGGTGACGACGGAGGCGTGGTTGCTCCGCCCTCGGTCTTGGAACGTCCCCGCCTTTCGCACCGCTGTGCCCAACATTTGCATTTGAATTTGTTTCTCCGTCCTGTGTTCGTGCAGCTTCATGATTTGGTGCAGTACCTATCTTTTGGTTTTGGTGTATTCTCACTTGTTGGATCTCAAGTTTAA

Protein sequence

MPIDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPVWNFPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTENVMDENYSSSFLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPPSVLERPRLSHRCAQHLHLNLFLRPVFVQLHDLVQYLSFGFGVFSLVGSQV

Homology

[Close]

BLAST of HG10006397.1 vs. NCBI nr
Match: XP_031736682.1 (protein SRC2 homolog [Cucumis sativus] >KGN60949.1 hypothetical protein Csa_021167 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-62
Identity = 129/172 (75.00%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 1   MPIDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPV 60
           M IDYR  ++NIT AEGIKGVLSFTNFF KSKVYAAVSV G   A Q+TPLAKYFG+NPV
Sbjct: 1   MLIDYRVLDLNITSAEGIKGVLSFTNFFFKSKVYAAVSVDGTPSATQETPLAKYFGKNPV 60

Query: 61  WNFPMRFYLEELKLQENALTLKIQLRRKRTFG-GDEDIAEALIPLRNLLNGTENVMDENY 120
           WN  MRF+LEE KLQENALTLKI+L+R+RTFG  DEDIAEA IPLRNL NG ENV +EN 
Sbjct: 61  WNCSMRFHLEESKLQENALTLKIKLKRRRTFGRDDEDIAEASIPLRNLFNGNENVTNENC 120

Query: 121 SSSFLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPPSVLERPRLSHR 172
           SSSF+LSKSGG RGLVYFSY FSR Y AS A DDG  VAPP   ERP L+HR
Sbjct: 121 SSSFMLSKSGGLRGLVYFSYCFSRTYNASDASDDGATVAPPLAFERPPLAHR 172

[Close]

BLAST of HG10006397.1 vs. NCBI nr
Match: XP_022938307.1 (protein SRC2 [Cucurbita moschata] >KAG7021095.1 Protein SRC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-60
Identity = 117/159 (73.58%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 3   IDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPVWN 62
           +DYRAF +N+TC EGI+GVLSF NFFHKSKVYAAVS+ G   A Q+TPLAKYFGENPVWN
Sbjct: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60

Query: 63  FPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTENVMDENYSSS 122
           +PM+FYL+E KLQENALTL+IQLRRKR FGGDE IAEAL+PL+NL +G +NVMDENY SS
Sbjct: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120

Query: 123 FLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPPS 162
           +LLS SGGRRG VYFSY+FSR Y A+A  D   +VAP S
Sbjct: 121 WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLS 159

[Close]

BLAST of HG10006397.1 vs. NCBI nr
Match: KAG6586252.1 (Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-60
Identity = 117/159 (73.58%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 3   IDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPVWN 62
           +DYRAF +N+TC EGI+GVLSF NFFHKSKVYAAVS+ G   A Q+TPLAKYFGENPVWN
Sbjct: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60

Query: 63  FPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTENVMDENYSSS 122
           +PM+FYL+E KLQENALTL+IQLRRKR FGGDE IAEAL+PL+NL +G +NVMDENY SS
Sbjct: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120

Query: 123 FLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPPS 162
           +LLS SGGRRG VYFSY+FSR Y A+A  D   +VAP S
Sbjct: 121 WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLS 159

[Close]

BLAST of HG10006397.1 vs. NCBI nr
Match: XP_022150754.1 (protein SRC2 [Momordica charantia])

HSP 1 Score: 211.8 bits (538), Expect = 5.5e-51
Identity = 109/163 (66.87%), Postives = 125/163 (76.69%), Query Frame = 0


Query: 1   MPIDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPV 60
           M  D+R FNINITCAEG KGVLSF NFF K+KVYAAVSVVG  PA Q TPLA YFG+NPV
Sbjct: 1   MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAVQFTPLANYFGDNPV 60

Query: 61  WNFPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTE---NVMDE 120
           WNFPMRF LEE +LQ++ALTL+I+LRRKR FGGDE IAEA + L NLLN  +   N MD+
Sbjct: 61  WNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVRLGNLLNCNDSNLNFMDQ 120

Query: 121 NYSSSFLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPP 161
               S+LLS +GGRRG++YFSY F R   A+   D GGVVAPP
Sbjct: 121 ICGFSWLLSPAGGRRGILYFSYCFGRTIRATERSDGGGVVAPP 163

[Close]

BLAST of HG10006397.1 vs. NCBI nr
Match: KAA0048022.1 (protein SRC2-like [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-23
Identity = 63/83 (75.90%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 33  VYAAVSVVGISPAAQKTPLAKYFGENPVWNFPMRFYLEELKLQENALTLKIQLRRKRTFG 92
           VYAAV V GI  A Q+TPL K+FGENPVWNFPMRFYLEE KLQENALTLKI+L+RKRTF 
Sbjct: 277 VYAAVYVDGIPSATQETPLEKHFGENPVWNFPMRFYLEESKLQENALTLKIKLKRKRTFR 336

Query: 93  G-DEDIAEALIPLRNLLNGTENV 115
           G  EDI EA I LRNL NG +NV
Sbjct: 337 GYGEDIGEASILLRNLFNGNQNV 359

[Close]

BLAST of HG10006397.1 vs. ExPASy Swiss-Prot
Match: O04133 (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 0


Query: 1   MPIDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVG--ISPAAQKTPLAKYFGEN 60
           M ++YR   +NI  A+ IK V    N F K  VYAAVS+ G  + P    T + K  G N
Sbjct: 1   MTMEYRTLELNIISAKDIKNV----NLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSN 60

Query: 61  PVWNFPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTENVMDEN 120
           P WN+P++F + E   +EN L+L+I+L   RT  GD  I    +PLR LL+   +     
Sbjct: 61  PTWNYPVKFSVNESLAKENRLSLEIKLISDRTL-GDTVIGTVHVPLRELLDNPGDDSSFR 120

Query: 121 YSSSFLLSKSGGRRGLVYFSYHFSRAYGASAA 151
             S  ++ +S   +G + FSY F     A AA
Sbjct: 121 QVSYQVMKQSRKSKGSLNFSYKFGEHVPAPAA 147

[Close]

BLAST of HG10006397.1 vs. ExPASy TrEMBL
Match: A0A0A0LIU2 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030590 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 129/172 (75.00%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 1   MPIDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPV 60
           M IDYR  ++NIT AEGIKGVLSFTNFF KSKVYAAVSV G   A Q+TPLAKYFG+NPV
Sbjct: 1   MLIDYRVLDLNITSAEGIKGVLSFTNFFFKSKVYAAVSVDGTPSATQETPLAKYFGKNPV 60

Query: 61  WNFPMRFYLEELKLQENALTLKIQLRRKRTFG-GDEDIAEALIPLRNLLNGTENVMDENY 120
           WN  MRF+LEE KLQENALTLKI+L+R+RTFG  DEDIAEA IPLRNL NG ENV +EN 
Sbjct: 61  WNCSMRFHLEESKLQENALTLKIKLKRRRTFGRDDEDIAEASIPLRNLFNGNENVTNENC 120

Query: 121 SSSFLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPPSVLERPRLSHR 172
           SSSF+LSKSGG RGLVYFSY FSR Y AS A DDG  VAPP   ERP L+HR
Sbjct: 121 SSSFMLSKSGGLRGLVYFSYCFSRTYNASDASDDGATVAPPLAFERPPLAHR 172

[Close]

BLAST of HG10006397.1 vs. ExPASy TrEMBL
Match: A0A6J1FDP3 (protein SRC2 OS=Cucurbita moschata OX=3662 GN=LOC111444443 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 6.3e-61
Identity = 117/159 (73.58%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 3   IDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPVWN 62
           +DYRAF +N+TC EGI+GVLSF NFFHKSKVYAAVS+ G   A Q+TPLAKYFGENPVWN
Sbjct: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60

Query: 63  FPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTENVMDENYSSS 122
           +PM+FYL+E KLQENALTL+IQLRRKR FGGDE IAEAL+PL+NL +G +NVMDENY SS
Sbjct: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120

Query: 123 FLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPPS 162
           +LLS SGGRRG VYFSY+FSR Y A+A  D   +VAP S
Sbjct: 121 WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLS 159

[Close]

BLAST of HG10006397.1 vs. ExPASy TrEMBL
Match: A0A6J1DB07 (protein SRC2 OS=Momordica charantia OX=3673 GN=LOC111018814 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.7e-51
Identity = 109/163 (66.87%), Postives = 125/163 (76.69%), Query Frame = 0


Query: 1   MPIDYRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPV 60
           M  D+R FNINITCAEG KGVLSF NFF K+KVYAAVSVVG  PA Q TPLA YFG+NPV
Sbjct: 1   MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAVQFTPLANYFGDNPV 60

Query: 61  WNFPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTE---NVMDE 120
           WNFPMRF LEE +LQ++ALTL+I+LRRKR FGGDE IAEA + L NLLN  +   N MD+
Sbjct: 61  WNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVRLGNLLNCNDSNLNFMDQ 120

Query: 121 NYSSSFLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPP 161
               S+LLS +GGRRG++YFSY F R   A+   D GGVVAPP
Sbjct: 121 ICGFSWLLSPAGGRRGILYFSYCFGRTIRATERSDGGGVVAPP 163

[Close]

BLAST of HG10006397.1 vs. ExPASy TrEMBL
Match: A0A5A7TWY8 (Protein SRC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00900 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.2e-24
Identity = 63/83 (75.90%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 33  VYAAVSVVGISPAAQKTPLAKYFGENPVWNFPMRFYLEELKLQENALTLKIQLRRKRTFG 92
           VYAAV V GI  A Q+TPL K+FGENPVWNFPMRFYLEE KLQENALTLKI+L+RKRTF 
Sbjct: 277 VYAAVYVDGIPSATQETPLEKHFGENPVWNFPMRFYLEESKLQENALTLKIKLKRKRTFR 336

Query: 93  G-DEDIAEALIPLRNLLNGTENV 115
           G  EDI EA I LRNL NG +NV
Sbjct: 337 GYGEDIGEASILLRNLFNGNQNV 359

[Close]

BLAST of HG10006397.1 vs. ExPASy TrEMBL
Match: A0A6P3ZA45 (protein SRC2 homolog OS=Ziziphus jujuba OX=326968 GN=LOC107411858 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.9e-21
Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 3   IDYRAFNINITCAEG--IKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPV 62
           ++YR+ +IN+TC EG  +K +     FF + K+YA VS+VG S   QKTP+ K+ G    
Sbjct: 1   MEYRSLDINVTCLEGFQVKNL-----FFKRPKIYATVSIVGSSRTTQKTPVGKFAGSFQR 60

Query: 63  WNFPMRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIPLRNLLNGTENVMDENYS 122
           W++PMRFY+EE  LQEN L L I+LR  RT   D+D+ E  +P++ L    ++    +Y 
Sbjct: 61  WDYPMRFYIEESMLQENCLMLMIRLRSSRTLCRDKDVGEVYVPIKQLFLHNDH---NSYF 120

Query: 123 SSFLLSKSGGRRGLVYFSYHFSRAYGASAAGDDGGVVAPPSVLERP 167
              + + SG  +G ++FSY FS    +S+      V+   ++   P
Sbjct: 121 GYQVHTASGKPKGRLHFSYKFSDRKRSSSLSTSKAVIEHVNLTSPP 158

[Close]

BLAST of HG10006397.1 vs. TAIR 10
Match: AT3G05440.1 (C2 domain-containing protein )

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-09
Identity = 31/99 (31.31%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 5   YRAFNINITCAEGIKGVLSFTNFFHKSKVYAAVSVVGISPAAQKTPLAKYFGENPVWNFP 64
           Y+   IN+  A+ +  +    N   +  VY +VSV   S   Q TP A +  +   WN+ 
Sbjct: 4   YQPVEINVLSAQDLNSI----NLLFRPTVYVSVSVTRGSRDKQVTPAAAWDKKFLRWNYR 63

Query: 65  MRFYLEELKLQENALTLKIQLRRKRTFGGDEDIAEALIP 104
           M+FY+E+ K++ N      Q++ KR FG D+ + +  IP
Sbjct: 64  MKFYIEDDKVRRNESVFVFQIKCKRFFGSDQVVGKLFIP 98

The following BLAST results are available for this feature:

BLAST of HG10006397.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736682.1	2.4e-62	75.00	protein SRC2 homolog [Cucumis sativus] >KGN60949.1 hypothetical protein Csa_0211...	[more]
XP_022938307.1	1.3e-60	73.58	protein SRC2 [Cucurbita moschata] >KAG7021095.1 Protein SRC2, partial [Cucurbita...	[more]
KAG6586252.1	1.3e-60	73.58	Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022150754.1	5.5e-51	66.87	protein SRC2 [Momordica charantia]	[more]
KAA0048022.1	1.3e-23	75.90	protein SRC2-like [Cucumis melo var. makuwa]	[more]

BLAST of HG10006397.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04133	1.7e-15	36.84	Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1	[more]

BLAST of HG10006397.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIU2	1.2e-62	75.00	C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030590 PE=4 SV=...	[more]
A0A6J1FDP3	6.3e-61	73.58	protein SRC2 OS=Cucurbita moschata OX=3662 GN=LOC111444443 PE=4 SV=1	[more]
A0A6J1DB07	2.7e-51	66.87	protein SRC2 OS=Momordica charantia OX=3673 GN=LOC111018814 PE=4 SV=1	[more]
A0A5A7TWY8	6.2e-24	75.90	Protein SRC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00...	[more]
A0A6P3ZA45	4.9e-21	36.75	protein SRC2 homolog OS=Ziziphus jujuba OX=326968 GN=LOC107411858 PE=4 SV=1	[more]

BLAST of HG10006397.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05440.1	9.5e-09	31.31	C2 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 8..112 e-value: 8.0E-7 score: 29.3
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..119 score: 11.423033
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 7..142 e-value: 1.3E-9 score: 40.4
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 9..142
None	No IPR available	PANTHER	PTHR32246:SF101	OS01G0934100 PROTEIN	coord: 6..154
None	No IPR available	PANTHER	PTHR32246	INGRESSION PROTEIN FIC1	coord: 6..154

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10006397	HG10006397	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10006397.1-cds	HG10006397.1-cds-Chr07:18078442..18078558	CDS
HG10006397.1-cds	HG10006397.1-cds-Chr07:18080770..18081285	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10006397.1	HG10006397.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response