HG10005719.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005719.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like
Location	Chr07: 5061850 .. 5062038 (-)
Sequence length	189
RNA-Seq Expression	HG10005719.1
Synteny	HG10005719.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATAACTCTGAACAATGGCTTCAAGATGCCGCAAATTGGGTTAGGAGTTTGGCGTATGGAGAAGCAACAAATTAGAGACCTCATTATCAACGCCATTAAGATTGGTTATCGACATTTTGACTGCGCCAGTACCGCCTCGTCGCCTTCAACTGTTTTCTTCTTCATTTCAAACTTTCTCGTTTAA

mRNA sequence

ATGGCGATAACTCTGAACAATGGCTTCAAGATGCCGCAAATTGGGTTAGGAGTTTGGCGTATGGAGAAGCAACAAATTAGAGACCTCATTATCAACGCCATTAAGATTGGTTATCGACATTTTGACTGCGCCAGTACCGCCTCGTCGCCTTCAACTGTTTTCTTCTTCATTTCAAACTTTCTCGTTTAA

Coding sequence (CDS)

ATGGCGATAACTCTGAACAATGGCTTCAAGATGCCGCAAATTGGGTTAGGAGTTTGGCGTATGGAGAAGCAACAAATTAGAGACCTCATTATCAACGCCATTAAGATTGGTTATCGACATTTTGACTGCGCCAGTACCGCCTCGTCGCCTTCAACTGTTTTCTTCTTCATTTCAAACTTTCTCGTTTAA

Protein sequence

MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTVFFFISNFLV

Homology

[Close]

BLAST of HG10005719.1 vs. NCBI nr
Match: XP_038888382.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Benincasa hispida])

HSP 1 Score: 96.7 bits (239), Expect = 7.6e-17
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLNNGFKMPQIGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNNGFKMPQIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAADYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. NCBI nr
Match: XP_004148544.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Cucumis sativus] >KGN43185.1 hypothetical protein Csa_020578 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 5.0e-16
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLNNGFKMP IGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNNGFKMPLIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAADYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. NCBI nr
Match: KAA0054047.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 6.5e-16
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASS 50
          MAITLN+GFKMP IGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA T  S
Sbjct: 1  MAITLNSGFKMPVIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAGTLFS 49

[Close]

BLAST of HG10005719.1 vs. NCBI nr
Match: XP_008448040.1 (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo] >XP_016900511.1 PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo] >KAA0049677.1 NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo var. makuwa] >TYK12196.1 NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-15
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLN+GFKMP IGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNSGFKMPVIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAADYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. NCBI nr
Match: KAF8013481.1 (hypothetical protein BT93_I1350 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 89.7 bits (221), Expect = 9.3e-15
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLNNGFKMP IGLGVWRMEK+++RDLIIN+IKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNNGFKMPAIGLGVWRMEKKEMRDLIINSIKIGYRHFDCAADYQNEAEV 53

[Close]

BLAST of HG10005719.1 vs. ExPASy Swiss-Prot
Match: P28475 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica OX=3750 GN=S6PDH PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 7.0e-13
Identity = 29/51 (56.86%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 3  ITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          +TL++G++MP IGLG+WR+EK +++++I+NAIKIGYRHFDCA+   S + V
Sbjct: 4  VTLSSGYEMPVIGLGLWRLEKDELKEVILNAIKIGYRHFDCAAHYKSEADV 54

[Close]

BLAST of HG10005719.1 vs. ExPASy Swiss-Prot
Match: O94735 (NADPH-dependent D-xylose reductase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=XYL1 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 3.0e-08
Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCA 45
          M+ITLN+G++MP +G G W+++K    D I NAIK+GYR FD A
Sbjct: 1  MSITLNSGYEMPSVGFGCWKVDKATCADTIYNAIKVGYRLFDGA 44

[Close]

BLAST of HG10005719.1 vs. ExPASy Swiss-Prot
Match: Q5ZK84 (Aldo-keto reductase family 1 member A1 OS=Gallus gallus OX=9031 GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.3e-07
Identity = 21/51 (41.18%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 3  ITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          + L NG K+P IGLG W+ E  Q+++ +  A+ +GYRH DCA+  S+ + +
Sbjct: 8  VALYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEI 58

[Close]

BLAST of HG10005719.1 vs. ExPASy Swiss-Prot
Match: P51635 (Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 4.4e-07
Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 2  AITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          ++ L+ G KMP IGLG W+ E  Q++  I  A+ +GYRH DCAS   + + +
Sbjct: 5  SVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEI 56

[Close]

BLAST of HG10005719.1 vs. ExPASy Swiss-Prot
Match: P49378 (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=XYL1 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.4e-07
Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 3  ITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          +TLNNG KMP +GLG W+M      D I  AIKIGYR FD A   ++   V
Sbjct: 8  VTLNNGEKMPLVGLGCWKMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEV 58

[Close]

BLAST of HG10005719.1 vs. ExPASy TrEMBL
Match: A0A0A0K0G2 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G007830 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.4e-16
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLNNGFKMP IGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNNGFKMPLIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAADYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. ExPASy TrEMBL
Match: A0A5A7UHM0 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G001150 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASS 50
          MAITLN+GFKMP IGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA T  S
Sbjct: 1  MAITLNSGFKMPVIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAGTLFS 49

[Close]

BLAST of HG10005719.1 vs. ExPASy TrEMBL
Match: A0A1S4DX07 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo OX=3656 GN=LOC103490340 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.1e-16
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLN+GFKMP IGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNSGFKMPVIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAADYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. ExPASy TrEMBL
Match: A0A5A7U5P4 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001450 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.1e-16
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLN+GFKMP IGLGVWRMEKQQ+RDLIINAIKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNSGFKMPVIGLGVWRMEKQQVRDLIINAIKIGYRHFDCAADYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. ExPASy TrEMBL
Match: A0A2P2JAJ5 (Uncharacterized protein MANES_04G082800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          MAITLNNGFKMP IGLGVWRME ++IRDLIINAIKIGYRHFDCA+   + + V
Sbjct: 1  MAITLNNGFKMPIIGLGVWRMEGKEIRDLIINAIKIGYRHFDCAADYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. TAIR 10
Match: AT2G21260.1 (NAD(P)-linked oxidoreductase superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 8.1e-17
Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCASTASSPSTV 54
          M ITLN+GFKMP IGLGVWRMEK+++RDLII+AIKIGYRH DCA+   + + V
Sbjct: 1  MEITLNSGFKMPIIGLGVWRMEKEELRDLIIDAIKIGYRHLDCAANYKNEAEV 53

[Close]

BLAST of HG10005719.1 vs. TAIR 10
Match: AT2G21250.2 (NAD(P)-linked oxidoreductase superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.4e-16
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCAS 46
          M ITLN+GFKMP +GLGVWRMEK+ IRDLI+NAIKIGYRH DCA+
Sbjct: 1  MEITLNSGFKMPIVGLGVWRMEKEGIRDLILNAIKIGYRHLDCAA 45

[Close]

BLAST of HG10005719.1 vs. TAIR 10
Match: AT2G21250.1 (NAD(P)-linked oxidoreductase superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.4e-16
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 1  MAITLNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCAS 46
          M ITLN+GFKMP +GLGVWRMEK+ IRDLI+NAIKIGYRH DCA+
Sbjct: 1  MEITLNSGFKMPIVGLGVWRMEKEGIRDLILNAIKIGYRHLDCAA 45

[Close]

BLAST of HG10005719.1 vs. TAIR 10
Match: AT2G37770.1 (NAD(P)-linked oxidoreductase superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 3.4e-07
Identity = 20/40 (50.00%), Postives = 25/40 (62.50%), Query Frame = 0


Query: 5  LNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCA 45
          LN G K P +GLG W+     + D +  A+KIGYRH DCA
Sbjct: 10 LNTGAKFPSVGLGTWQASPGLVGDAVAAAVKIGYRHIDCA 49

[Close]

BLAST of HG10005719.1 vs. TAIR 10
Match: AT2G37770.2 (NAD(P)-linked oxidoreductase superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 3.4e-07
Identity = 20/40 (50.00%), Postives = 25/40 (62.50%), Query Frame = 0


Query: 5  LNNGFKMPQIGLGVWRMEKQQIRDLIINAIKIGYRHFDCA 45
          LN G K P +GLG W+     + D +  A+KIGYRH DCA
Sbjct: 10 LNTGAKFPSVGLGTWQASPGLVGDAVAAAVKIGYRHIDCA 49

The following BLAST results are available for this feature:

BLAST of HG10005719.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888382.1	7.6e-17	83.02	NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Benincasa hispida]	[more]
XP_004148544.1	5.0e-16	81.13	NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Cucumis sativus] >KGN43185....	[more]
KAA0054047.1	6.5e-16	87.76	NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis melo var. maku...	[more]
XP_008448040.1	1.9e-15	79.25	PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cucumis mel...	[more]
KAF8013481.1	9.3e-15	75.47	hypothetical protein BT93_I1350 [Corymbia citriodora subsp. variegata]	[more]

BLAST of HG10005719.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28475	7.0e-13	56.86	NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica OX=3750 G...	[more]
O94735	3.0e-08	54.55	NADPH-dependent D-xylose reductase OS=Meyerozyma guilliermondii (strain ATCC 626...	[more]
Q5ZK84	3.3e-07	41.18	Aldo-keto reductase family 1 member A1 OS=Gallus gallus OX=9031 GN=AKR1A1 PE=2 S...	[more]
P51635	4.4e-07	42.31	Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 P...	[more]
P49378	4.4e-07	50.98	NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis (strain ATCC 8585 /...	[more]

BLAST of HG10005719.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K0G2	2.4e-16	81.13	Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G00783...	[more]
A0A5A7UHM0	3.1e-16	87.76	NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo var. ma...	[more]
A0A1S4DX07	9.1e-16	79.25	NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo OX=3656...	[more]
A0A5A7U5P4	9.1e-16	79.25	NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo var. ma...	[more]
A0A2P2JAJ5	1.0e-14	77.36	Uncharacterized protein MANES_04G082800 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]

BLAST of HG10005719.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21260.1	8.1e-17	69.81	NAD(P)-linked oxidoreductase superfamily protein	[more]
AT2G21250.2	1.4e-16	80.00	NAD(P)-linked oxidoreductase superfamily protein	[more]
AT2G21250.1	1.4e-16	80.00	NAD(P)-linked oxidoreductase superfamily protein	[more]
AT2G37770.1	3.4e-07	50.00	NAD(P)-linked oxidoreductase superfamily protein	[more]
AT2G37770.2	3.4e-07	50.00	NAD(P)-linked oxidoreductase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036812	NADP-dependent oxidoreductase domain superfamily	GENE3D	3.20.20.100		coord: 1..61 e-value: 5.4E-14 score: 53.7
IPR036812	NADP-dependent oxidoreductase domain superfamily	SUPERFAMILY	51430	NAD(P)-linked oxidoreductase	coord: 3..45
None	No IPR available	PANTHER	PTHR11732	ALDO/KETO REDUCTASE	coord: 3..47
None	No IPR available	PANTHER	PTHR11732:SF209	NAD(P)-LINKED OXIDOREDUCTASE SUPERFAMILY PROTEIN	coord: 3..47

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10005719	HG10005719	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10005719.1-cds	HG10005719.1-cds-Chr07:5061850..5062038	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10005719.1	HG10005719.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004032	alditol:NADP+ 1-oxidoreductase activity
molecular_function	GO:0047641	aldose-6-phosphate reductase (NADPH) activity
molecular_function	GO:0047834	D-threo-aldose 1-dehydrogenase activity