HG10005628.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005628.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein translocase complex, SecE/Sec61-gamma subunit
Location	Chr07: 4397831 .. 4399174 (-)
Sequence length	480
RNA-Seq Expression	HG10005628.1
Synteny	HG10005628.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTAAATCCACTTTCCTCTCTCATAATTTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTCTTTTAATTTTTGGGTTAAAGTATCATTTTGGTCCTCTTTGAAACTCGTTTCATTTTAGGTACGATTTGTCTTCCTCAGTCCAAGGATCCATTCCACGTTCTACATTACAACACAGCAAGATTCAACAAGTCCAATATCTTTCAGAGACTGCACACCAGGGTACTTTCTACTCATTTGGGACTTTTGAATTTGATTGCTCCTACAATCTGATCATTTCAATTTTCCGTTTGTTACTTCAGATTTCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCACGCTGCATTGGGACGAGATAATCAGCAACTGAGCTTTAATGATGAATTGCCTCCAGAACCTTTCTTCTTGGGTCTAATTAAAGAAACCATTTGGTAATCTTTCACAGCTCTTTCTCCCACGTTAATCATGAATGTTGGACATTGAAGATTAGAACTGGTTTTAGTCCTACAATCACTTAGTTGTGTTTCTGGAGGTATATTTGCCCTGTTCAGCTTATGCTAATGTGCTCCATATCTATGCTTTATCTGGACACTAAAACGACGTTTGTTATATTACATTCTTTAACAAACTCAAAGATGATTAAGTGTATGTCTGGGAGTGATTTTGAAATTATTAAACATCACTTTTGTCATGTTTAAAATTACTCAATAACATGCCTTTAATTACTTAAAATTAATTTAATATTGAATTTTACATTTTTAAATGCAGTTTTTATATCATCAAAATTGGTTTTGAATGATTAAAAACATGTTTCATAAAAATGACAAAAGTCATTTTAAATGCTTTGGAATCAAACATGCCTTAATAGGTTTTGTTCATTCAAAAAATCATGAATGTGGATCATCATGTTTAGGATGGTTATGTTTTGAACTTCAGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAGAGCACGGTATGGAGGCAAGATTAGTATGTTAAATATTGCATGTGCATTGTCTTTAGTTGTAGGATTCATTTTTGATAAAATACTTCAATTTATGATGGCAATTCACTCAATATTCTCTCTGACCTTTGGCTTTTATTTTGAATTCAATCCAATTTGGTGCAGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATCGTAGCACTCTCATTGGTGGACTCGGCACTTAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCGTAA

mRNA sequence

ATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTACGATTTGTCTTCCTCAGTCCAAGGATCCATTCCACGTTCTACATTACAACACAGCAAGATTCAACAAGTCCAATATCTTTCAGAGACTGCACACCAGGATTTCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCACGCTGCATTGGGACGAGATAATCAGCAACTGAGCTTTAATGATGAATTGCCTCCAGAACCTTTCTTCTTGGGTCTAATTAAAGAAACCATTTGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAGAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATCGTAGCACTCTCATTGGTGGACTCGGCACTTAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCGTAA

Coding sequence (CDS)

ATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTACGATTTGTCTTCCTCAGTCCAAGGATCCATTCCACGTTCTACATTACAACACAGCAAGATTCAACAAGTCCAATATCTTTCAGAGACTGCACACCAGGATTTCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCACGCTGCATTGGGACGAGATAATCAGCAACTGAGCTTTAATGATGAATTGCCTCCAGAACCTTTCTTCTTGGGTCTAATTAAAGAAACCATTTGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAGAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATCGTAGCACTCTCATTGGTGGACTCGGCACTTAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCGTAA

Protein sequence

MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS

Homology

[Close]

BLAST of HG10005628.1 vs. NCBI nr
Match: XP_038888680.1 (uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888682.1 uncharacterized protein LOC120078486 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 5.6e-72
Identity = 144/159 (90.57%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVIASALGAN IGT+C+PQSK+PFHVLHYNTARFNKS I QRLHTRISKR+GHH+YAGRM
Sbjct: 1   MVIASALGANPIGTVCIPQSKEPFHVLHYNTARFNKSTILQRLHTRISKRTGHHVYAGRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA G+DNQQLSFNDE PPEPFFL LIKET+WGLRSLLIFLAEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTATLALVLVALLIVALS VDSALSYILTL LRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYILTLFLRRTS 159

[Close]

BLAST of HG10005628.1 vs. NCBI nr
Match: XP_004144859.1 (uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hypothetical protein Csa_020454 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66
Identity = 135/158 (85.44%), Postives = 143/158 (90.51%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVI S LG  HIG ICLPQSK+P+HVL YNT R NKS++FQRLHTRISKRSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAAL ++ QQ SFNDELPPEPFFL LIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRT 159
           STLKTATLALVLVALLIVALS VDSALSY+LTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]

BLAST of HG10005628.1 vs. NCBI nr
Match: XP_023529805.1 (uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.6 bits (636), Expect = 1.8e-62
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVIASALGANHIG   LP S  PFHV  YNTARFNK+NIFQ L TRIS+RSG HLYA RM
Sbjct: 1   MVIASALGANHIGMASLPHSNRPFHV-RYNTARFNKANIFQGLPTRISRRSG-HLYADRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA GRDNQQL FNDELPPEPFFLG+IKET+WGLRSL IFLAEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTAT ALVLVALLIVALS VDS LSYILT +LRRTS
Sbjct: 121 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 157

[Close]

BLAST of HG10005628.1 vs. NCBI nr
Match: XP_022928229.1 (uncharacterized protein LOC111435124 [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 133/159 (83.65%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVIASALGANHIG   LP S  PFHV  YNTAR NK+NIFQ L TRIS+R G HLYA RM
Sbjct: 73  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 132

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA GRDNQQL FNDELPPEPFFLG+IKET+WGLRSL IFLAEQPSQLKYIEWPSFQ
Sbjct: 133 GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 192

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTAT ALVLVALLIVALS VDS LSYILT +LRRTS
Sbjct: 193 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 229

[Close]

BLAST of HG10005628.1 vs. NCBI nr
Match: XP_008447932.1 (PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >KAA0025129.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa] >TYK19371.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 131/159 (82.39%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVI S LG +HIG ICLPQ K  +HVL YN  R NKS++FQRLHTRISKRSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA G++ QQ SFNDE P EPFFL LIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTATLALVLVALLIVALS VDSALSY+LTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]

BLAST of HG10005628.1 vs. ExPASy TrEMBL
Match: A0A0A0K1C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 135/158 (85.44%), Postives = 143/158 (90.51%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVI S LG  HIG ICLPQSK+P+HVL YNT R NKS++FQRLHTRISKRSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAAL ++ QQ SFNDELPPEPFFL LIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRT 159
           STLKTATLALVLVALLIVALS VDSALSY+LTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]

BLAST of HG10005628.1 vs. ExPASy TrEMBL
Match: A0A6J1EK97 (uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC111435124 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 133/159 (83.65%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVIASALGANHIG   LP S  PFHV  YNTAR NK+NIFQ L TRIS+R G HLYA RM
Sbjct: 73  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 132

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA GRDNQQL FNDELPPEPFFLG+IKET+WGLRSL IFLAEQPSQLKYIEWPSFQ
Sbjct: 133 GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 192

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTAT ALVLVALLIVALS VDS LSYILT +LRRTS
Sbjct: 193 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 229

[Close]

BLAST of HG10005628.1 vs. ExPASy TrEMBL
Match: A0A1S3BJG9 (uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61
Identity = 131/159 (82.39%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVI S LG +HIG ICLPQ K  +HVL YN  R NKS++FQRLHTRISKRSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA G++ QQ SFNDE P EPFFL LIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTATLALVLVALLIVALS VDSALSY+LTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]

BLAST of HG10005628.1 vs. ExPASy TrEMBL
Match: A0A5A7SIK1 (Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00250 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61
Identity = 131/159 (82.39%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVI S LG +HIG ICLPQ K  +HVL YN  R NKS++FQRLHTRISKRSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA G++ QQ SFNDE P EPFFL LIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTATLALVLVALLIVALS VDSALSY+LTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]

BLAST of HG10005628.1 vs. ExPASy TrEMBL
Match: A0A6J1JF36 (uncharacterized protein LOC111486331 OS=Cucurbita maxima OX=3661 GN=LOC111486331 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 131/159 (82.39%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRM 60
           MVIASALGANHIG   LP S  PF V HYNTARFNK+N+FQ L TRIS R G HLYA RM
Sbjct: 1   MVIASALGANHIGMTSLPHSNRPFRV-HYNTARFNKANLFQGLPTRISGRGG-HLYADRM 60

Query: 61  GFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQ 120
           GFNHAA GRDN QL FNDELPPEPFFLG+IKET+WGLRSL IFLAEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGRDNPQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS 160
           STLKTAT ALVLVALLIVALS VDS LS+ILT +LRRTS
Sbjct: 121 STLKTATFALVLVALLIVALSSVDSVLSFILTFILRRTS 157

[Close]

BLAST of HG10005628.1 vs. TAIR 10
Match: AT4G38490.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 61/117 (52.14%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 49  KRSGHHLYAGRMGFNH-------AALGRDNQQLSFNDELP-PEPFFLGLIKETIWGLRSL 108
           K SG     GR+   H        ++G   +  S + +LP  EP +L L+++ +W  RSL
Sbjct: 35  KFSGDLSINGRVSHKHVRGSGTVGSVGSARESWSSHKKLPEEEPLWLSLLRDMVWSTRSL 94

Query: 109 LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRR 158
           L F+AEQPSQLKYIEWP+F STLKTATL+L LVA+ IVALS VD+AL YIL L+LR+
Sbjct: 95  LSFMAEQPSQLKYIEWPTFASTLKTATLSLCLVAVFIVALSSVDAALCYILALILRK 151

The following BLAST results are available for this feature:

BLAST of HG10005628.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888680.1	5.6e-72	90.57	uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 unchara...	[more]
XP_004144859.1	2.7e-66	85.44	uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hy...	[more]
XP_023529805.1	1.8e-62	84.91	uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]	[more]
XP_022928229.1	2.6e-61	83.65	uncharacterized protein LOC111435124 [Cucurbita moschata]	[more]
XP_008447932.1	3.4e-61	82.39	PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 P...	[more]

BLAST of HG10005628.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005628.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1C8	1.3e-66	85.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1	[more]
A0A6J1EK97	1.3e-61	83.65	uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC1114351...	[more]
A0A1S3BJG9	1.7e-61	82.39	uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=...	[more]
A0A5A7SIK1	1.7e-61	82.39	Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuw...	[more]
A0A6J1JF36	1.8e-60	82.39	uncharacterized protein LOC111486331 OS=Cucurbita maxima OX=3661 GN=LOC111486331...	[more]

BLAST of HG10005628.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38490.1	1.3e-21	52.14	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038379	SecE superfamily	GENE3D	1.20.5.1030	Preprotein translocase secy subunit	coord: 97..154 e-value: 8.0E-7 score: 30.7
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 103..155 e-value: 9.1E-9 score: 35.1
None	No IPR available	PANTHER	PTHR37247	TRANSMEMBRANE PROTEIN	coord: 1..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10005628	HG10005628	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10005628.1-cds	HG10005628.1-cds-Chr07:4397831..4397944	CDS
HG10005628.1-cds	HG10005628.1-cds-Chr07:4398101..4398182	CDS
HG10005628.1-cds	HG10005628.1-cds-Chr07:4398688..4398833	CDS
HG10005628.1-cds	HG10005628.1-cds-Chr07:4398914..4399014	CDS
HG10005628.1-cds	HG10005628.1-cds-Chr07:4399138..4399174	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10005628.1	HG10005628.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006605	protein targeting
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0090351	seedling development
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009528	plastid inner membrane