HG10005499.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005499.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	sodium/potassium/calcium exchanger 1-like
Location	Chr07: 3066756 .. 3067235 (+)
Sequence length	480
RNA-Seq Expression	HG10005499.1
Synteny	HG10005499.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCTGCAATGGTATTTTACTCTTCTCTCCTCCCTTTTCTCCACTCTTTAAACCTTTATATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTTCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACTCCGGCGATGAACAGAGCGGCGGAAATGAAGCTCTAGTGGCTGCAATGGCAGATGGGAGCAGAAAAATTGAGAGCAAAGTTGAAATTGGAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAATTGAAGAATTGATTACAAAGGATGAAGATGAAGAAGAAAGATTCAATTTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGAAGGAATTAAATTTGAATCACAGCAAATGCTTGTTTTGTAA

mRNA sequence

ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCTGCAATGGTATTTTACTCTTCTCTCCTCCCTTTTCTCCACTCTTTAAACCTTTATATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTTCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACTCCGGCGATGAACAGAGCGGCGGAAATGAAGCTCTAGTGGCTGCAATGGCAGATGGGAGCAGAAAAATTGAGAGCAAAGTTGAAATTGGAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAATTGAAGAATTGATTACAAAGGATGAAGATGAAGAAGAAAGATTCAATTTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGAAGGAATTAAATTTGAATCACAGCAAATGCTTGTTTTGTAA

Coding sequence (CDS)

ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCTGCAATGGTATTTTACTCTTCTCTCCTCCCTTTTCTCCACTCTTTAAACCTTTATATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTTCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACTCCGGCGATGAACAGAGCGGCGGAAATGAAGCTCTAGTGGCTGCAATGGCAGATGGGAGCAGAAAAATTGAGAGCAAAGTTGAAATTGGAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAATTGAAGAATTGATTACAAAGGATGAAGATGAAGAAGAAAGATTCAATTTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGAAGGAATTAAATTTGAATCACAGCAAATGCTTGTTTTGTAA

Protein sequence

MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEERFNFYEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

Homology

[Close]

BLAST of HG10005499.1 vs. NCBI nr
Match: XP_038888415.1 (histone H3.v1-like [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 2.5e-64
Identity = 150/160 (93.75%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLIGNS
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISTTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60

Query: 61  GDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEERFNFY 120
            DEQSG NEAL AAMADG+RKIESKVEI EERENGLIAKEEE EELITKDEDEEERFNFY
Sbjct: 61  SDEQSGRNEALGAAMADGNRKIESKVEIEEERENGLIAKEEENEELITKDEDEEERFNFY 120

Query: 121 -EEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
            EEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQ+ VL
Sbjct: 121 EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVFVL 160

[Close]

BLAST of HG10005499.1 vs. NCBI nr
Match: XP_011658666.2 (glutamic acid-rich protein [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-53
Identity = 136/176 (77.27%), Postives = 145/176 (82.39%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  GDEQSGGNEALVAA-MADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEERFNF 120
            DE+S GNEAL AA MADG+RKIESKVEI EER NGL+  E++IE LIT +E EEERF  
Sbjct: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120

Query: 121 YEE----------------EEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
           YEE                EEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Sbjct: 121 YEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 176

[Close]

BLAST of HG10005499.1 vs. NCBI nr
Match: XP_008462077.2 (PREDICTED: gem-associated protein 2-like [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 8.2e-47
Identity = 122/159 (76.73%), Postives = 131/159 (82.39%), Query Frame = 0


Query: 13  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALV 72
           MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ +EQS  NEAL 
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60

Query: 73  A-AMADGSRKIESK--VEIGEERENGLIAKEEEIEELITKDEDEEERFNFY--------- 132
           A  MADG+RKIESK  VE+ EER NGL+  EE+ E LIT +EDEEERF  Y         
Sbjct: 61  AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 120

Query: 133 EEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
           EEEEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Sbjct: 121 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159

[Close]

BLAST of HG10005499.1 vs. NCBI nr
Match: XP_023530308.1 (uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 3.5e-42
Identity = 117/163 (71.78%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEER 120
           GD  SGG+    EAL AAMADGS KIESKVE  EER NGLI K+EE E  I +D+D+   
Sbjct: 61  GDRHSGGDSRGAEALEAAMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDDDD--- 120

Query: 121 FNFYEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
               +++EE      EELNKKCEEFIRKMK GIK ESQQ+LVL
Sbjct: 121 ----DDDEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156

[Close]

BLAST of HG10005499.1 vs. NCBI nr
Match: XP_022928452.1 (uncharacterized protein LOC111435260 [Cucurbita moschata])

HSP 1 Score: 181.4 bits (459), Expect = 6.0e-42
Identity = 117/163 (71.78%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEER 120
           GD  SGG+    EAL A+MADGS KIESKVE  EER NGLI K+EE E  I +D+D ++ 
Sbjct: 61  GDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDDDNDDD 120

Query: 121 FNFYEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
               ++EEE      EELNKKCEEFIRKMK GIK ESQQ+LVL
Sbjct: 121 ----DDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

[Close]

BLAST of HG10005499.1 vs. ExPASy TrEMBL
Match: A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.7e-55
Identity = 134/160 (83.75%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  GDEQSGGNEALVAA-MADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEERFNF 120
            DE+S GNEAL AA MADG+RKIESKVEI EER NGL+  E++IE LIT +E EEERF  
Sbjct: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120

Query: 121 YEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
           Y  EEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Sbjct: 121 Y--EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 158

[Close]

BLAST of HG10005499.1 vs. ExPASy TrEMBL
Match: A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.9e-47
Identity = 122/159 (76.73%), Postives = 131/159 (82.39%), Query Frame = 0


Query: 13  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALV 72
           MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ +EQS  NEAL 
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60

Query: 73  A-AMADGSRKIESK--VEIGEERENGLIAKEEEIEELITKDEDEEERFNFY--------- 132
           A  MADG+RKIESK  VE+ EER NGL+  EE+ E LIT +EDEEERF  Y         
Sbjct: 61  AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 120

Query: 133 EEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
           EEEEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Sbjct: 121 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159

[Close]

BLAST of HG10005499.1 vs. ExPASy TrEMBL
Match: A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.9e-42
Identity = 117/163 (71.78%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEER 120
           GD  SGG+    EAL A+MADGS KIESKVE  EER NGLI K+EE E  I +D+D ++ 
Sbjct: 61  GDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDDDNDDD 120

Query: 121 FNFYEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL 160
               ++EEE      EELNKKCEEFIRKMK GIK ESQQ+LVL
Sbjct: 121 ----DDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

[Close]

BLAST of HG10005499.1 vs. ExPASy TrEMBL
Match: A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.0e-42
Identity = 118/169 (69.82%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI +S
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GDEQSGGN-----EALVAAMADGSRKIESKVEIGEERENGLIAKEE-EIEELITKDEDEE 120
           G EQ GG+     EAL AAM D +  IE KVE GEERENG IA+EE E E L+T++E ++
Sbjct: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120

Query: 121 ERFNFYEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQMLVL 160
           E     EEE+ E EE+    +EEL+KK EEFIRKMK GIK ESQQ+L+L
Sbjct: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169

[Close]

BLAST of HG10005499.1 vs. ExPASy TrEMBL
Match: A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 7.2e-41
Identity = 113/160 (70.62%), Postives = 129/160 (80.62%), Query Frame = 0


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
           MK++ISASLLSAMV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG S
Sbjct: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60

Query: 61  GDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKEEEIEELITKDEDEEERFNFY 120
           G+EQ GG             K+ESKVE GEERENGL+A++EE E+LIT+DE+ EE     
Sbjct: 61  GEEQGGGG------------KVESKVEDGEERENGLVAEQEESEKLITEDEEHEE----- 120

Query: 121 EEEEEEEEE--IDEELNKKCEEFIRKMKEGIKFESQQMLV 159
           EEEEEEE+    +EELN+KCEEFIRKMK  IKFE QQ+LV
Sbjct: 121 EEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 143

[Close]

BLAST of HG10005499.1 vs. TAIR 10
Match: AT2G04495.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 62/186 (33.33%), Postives = 95/186 (51.08%), Query Frame = 0


Query: 2   KLVISASLLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI 61
           K++  AS+ S ++ YSSL+      LH L++Y S+ + K YMFLLCNG++ FI+      
Sbjct: 18  KIIALASIFSFILSYSSLISSLQQRLHLLSMY-SNLVDKKYMFLLCNGIVGFIL--GSFH 77

Query: 62  GNSGDEQSGGNEALVAAMAD------GSRKIESKVEIGEERENGLIAKEEEIEE-----L 121
           GNS     G    ++    +         K++  V + EE+    ++KEEE EE     +
Sbjct: 78  GNSESLSQGKAINIIEQTKEVGIKDLKETKLKKVVALLEEKS---VSKEEEEEEEGGRVV 137

Query: 122 ITKDEDEEERFNFYEEEEE---------------EEEEID------EELNKKCEEFIRKM 152
           + +  +EEE     E +EE               ++EEI+      E+LNKKCE+FIRKM
Sbjct: 138 LFRGIEEEEVSLVVEVDEEILVQDLAIIRVDDHHDDEEINDSLLSVEDLNKKCEDFIRKM 197

[Close]

BLAST of HG10005499.1 vs. TAIR 10
Match: AT2G04515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04495.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.4e-04
Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 0


Query: 2   KLVISASLLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI 61
           K++  AS+ S ++ YSSL+      LH L +Y S+ + K YMFLLCNG++ FI+      
Sbjct: 18  KIIAFASIFSFILSYSSLISSLQQRLHLLAMY-SNLVDKKYMFLLCNGIVGFIL--GSFH 77

Query: 62  GNSGDEQSGGNEALVAAMADGSRK--IESKV-EIGEERENGLIAKEEEIEELITKDEDEE 121
           GNS     G    +V    +   K   E+KV ++    E   ++KEEE   +++++E+EE
Sbjct: 78  GNSDSLSHGKAINIVEQTKEVGIKDLKETKVNKVVALLEESNVSKEEEGRVVLSREEEEE 137

Query: 122 ERFNFYEEE--------------EEEEEEID------EELNKKCEEFIRKMKEGIKF 152
                 E+E               ++++ I+      E+LNKKCE+FIRKMK  I++
Sbjct: 138 VALVVKEDEGILVQDLSITRLDDHDDDDAINDSLLSSEDLNKKCEDFIRKMKAEIRY 191

[Close]

BLAST of HG10005499.1 vs. TAIR 10
Match: AT3G13130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.1e-04
Identity = 62/182 (34.07%), Postives = 94/182 (51.65%), Query Frame = 0


Query: 8   SLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGD-EQSG 67
           SLL++  FY  L  F+  L   ++  + KNYMFLLCNGL+V + + SGL+ +S   E+  
Sbjct: 24  SLLTSHDFY--LYRFMIQL---VTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIW 83

Query: 68  GNEALVAAMADGSR-----KIESKVEIGEERENGL---IAKEEEIEELITKDEDEEE--- 127
            N        D        ++E K + G   E+ L   +  EE+ +   T+D +EE+   
Sbjct: 84  SNTDKTFDYGDFESYTTILELEYKSDHGIGTESFLAEEVTVEEDTKHQETEDNEEEDDDD 143

Query: 128 ---RFNFYEEE---------EEEEEEI------DEELNKKCEEFIRKMKEGIKFESQQML 160
                N  EEE         EEEE  +      +EE+NKK +EFIRKMKE ++ E+++ L
Sbjct: 144 NTLADNDGEEECGLRGGSINEEEEGNVGVMTSTEEEMNKKFDEFIRKMKEELRIEAKRHL 200

The following BLAST results are available for this feature:

BLAST of HG10005499.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888415.1	2.5e-64	93.75	histone H3.v1-like [Benincasa hispida]	[more]
XP_011658666.2	1.5e-53	77.27	glutamic acid-rich protein [Cucumis sativus]	[more]
XP_008462077.2	8.2e-47	76.73	PREDICTED: gem-associated protein 2-like [Cucumis melo]	[more]
XP_023530308.1	3.5e-42	71.78	uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]	[more]
XP_022928452.1	6.0e-42	71.78	uncharacterized protein LOC111435260 [Cucurbita moschata]	[more]

BLAST of HG10005499.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005499.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K349	6.7e-55	83.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1	[more]
A0A1S3CG16	3.9e-47	76.73	gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1	[more]
A0A6J1EJY9	2.9e-42	71.78	uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1I0H9	5.0e-42	69.82	sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1C4P4	7.2e-41	70.63	ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 P...	[more]

BLAST of HG10005499.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04495.1	1.4e-04	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G04515.1	2.4e-04	32.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13130.1	3.1e-04	34.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..140
None	No IPR available	PANTHER	PTHR34947:SF3	TRANSMEMBRANE PROTEIN	coord: 1..158
None	No IPR available	PANTHER	PTHR34947	TRANSMEMBRANE PROTEIN	coord: 1..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10005499	HG10005499	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10005499.1-cds	HG10005499.1-cds-Chr07:3066756..3067235	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10005499.1	HG10005499.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004386	helicase activity