HG10003147.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003147.1
TypemRNA
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
LocationChr11: 17993937 .. 17999702 (+)
Sequence length384
RNA-Seq ExpressionHG10003147.1
SyntenyHG10003147.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGCAGGCTAAGCAATTTGGGTTCAAAGATCCTTGGTGGAAATGGTGTTGTTGGTCGCTCAATCGTTTCATCTCTTCGACTTCGCTCCGGTATGGGCCTTCCTGTCGGCAGACACATCGTCCCCGACAAACCCGTAAGCATTTCAACCTTCAACGCTTAAATTCGTTGCGAAATCAGTACCCCTTTGACGCAGATTCTGTAGGATTTATGATTATTTTTCCCTTTTTAGCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTTCTTTTCCCGAGCCCTGTATTGATCGTATTGCAGATACGGTTGGGAAGGTATGTTGGTTCTCTTTGAGTATTTTGTATTTTCATTTCTCCTCCAATTTGTATATTTATCTTGTTTTTCTTCTTTTTCAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGTAAGTATACTGAACTGCACATCTGTTGCGGATCTTTTGTACTACGTTCTCTGTTGAATTATTTGATTTCCCCACCTGCATACCGTGCATTTTGTGAAATAACTCTTGAGATGGCTAACTTATAACATGATGCAAAGCAGAACAGTTTTTTAGATTAATTTTATACTATGGCTCTGGAGGCTTTCCACTAAGAGTAACTGTCTACCATGCCTAGCCTAGTAATATGGGATTTCACTGACCAGAGTAGAAGGTCAAAGAGCTTGTTTTGTCACACAATTCTTTGGATTTTAGACCCTGGACTGATATGAGGTACCCTTATGGATGTGCACAGCTTTTTTGATAAGTGGAGGGTTGTTCTCCCTTCTCTGTCTAAGCAATGAGGTTTCAGGAGAGTAGGAGGGATAATGGGAACATGTTAGAAGAATTAGACAGCAGTGAAGAAAAGGGAAGTAGGAGGGAATAGAAGTATTATTAATATTTTACTCATAGTCTTAACATTTCATTCACTTGTGGAGTTGTGGGCTTGAAAACTAGTAAAAGGCCAAACAAGTTGCTATTAATATTACTCGGAGAGAATATGACATTACAGACTTAAACAGACCTTTTGGTCTTGTACCATGTTAACTTAAATGATCACTAGATCATACAAAGAGGTGAAGACAACTCCAACACAAAGGAGTTACAATAAACATCCCCAATTTGGGAAAAGAGAAGCAAAGCTATAAGAATGGAAAAATATATGTAATTTGCACCAAGAGATAGAGATAGCTAGGTAGATGACATTTTCAAGGAATTTATAATAATCACAATCCTTACCCACAAGCCTTTGATTTCTCTCAAACCAAGTAGACCAAAAGAAAGCCTGAACGAGATGTTTCCATAGAAGCTCATTTTCTTTCTTAAAAGGATGACCCACGAGAGTATAAGAAATAAGAGCTTTTGGGTCCCATTGGAACAGCCATGGAGGATAACATCTCGATCCAAATCCTTGATGCAAAAGAATAAGTGGAAAATAATGGCCCGTTTGGATTGACTTTCTAAGTGTCTATAAACACTGTTTTTGCACTTATAAATACTTATTTAAACTCTTAGAAAGTCAATCCAAACATGCTATAAATGTCTTTGCGATTCAGCATTTTTTTCTTCAACGGATGCACCAATTTGGGAAGAGAACCAAATATGACTACCTCATTTCATAAAGGTATTAATATTGCAAATAGACTTCAAAGAAGAATGCCACACTTGTCACTTTCCCTCGCTTGGTTTGTTATGTGTTTTTCGAATGTGGAAACTCAATTTCAATTGTCATCTTTTTGGTACTTGCTTTTTTGCCAATACGTACTGGACATTTTATTTTCCAAGCTTTTGGTTGGAACATGGTTATGTCGAGCACAATTCATGTAGGAAAAGTCTTTAGCTTGCGATAAACATAATTTTCTTTTGGACTCTTTAGTTGGAGAGAAATGTGCAAACCTTCAATGACAAGCACTCAACCTTCGATAATTTTATGGATTTGATGCTTTTTCCATGCTAAATGTAAATCACCTTTTACCAATTTCCTCTCTTCTTTTAAATTGGAGAACTCTCTTGTAATCTACCTATTAGCATTGGGACTCTATTAACTCCCCTTTTCATTTCATTCATCAATGAAACCCATTCTCCTAAGAATAAAAAGAACCATATATGGTAACCTCCATTGTAGTTTTTCATGAGTATTTATGGCATAGTGAAAGAGTTCCCAAAGGAAAATTCTGATCTTTTTGGGGTAAGTGTTACTCCTGATAGCCATACAAGAAGAGTTCTCCTTCGAACATTGGACCCCAACCCAGCAGCAAGGATTTGATAAGAAAGGAACCATTTTTTTTTCCAAATTCCAAGCCCGCATATCTTCAGATTGTGTTAAATGATTAGAAGACAGCAAGTGGCTGATATTAGCCCAATCCAGAATTTCTGCATCCTTCAAGTTGTGCCTGGGGCATAAGTTCCAAAAACAAGCAGAGAGTTTCTTTCTGTCTTCAACGGAAGCATACTTTTGGTCAGATATAGAGTAGAGTCAAGGAGAAGTTTCTGCCAAAGGAGCTCCTTGAAGCCATCTTTCATGCCATATGGAAACTTAAACCACTTTTAGCTGATGTCTACATCTTTGGTGGTTGGGACAATTCAACACTAAAATCGAACCCACTTCCAACCTGCCTTTTTTTCCAACCATGAAGGGACGAGATAAGGGAATCTGACAAGAAAGGGGGCATCTTTATTGAAAGTTTCCTCACCATAGATCTCCACGGTTGCAGTAATCCTCCACATAGTGAAGCTAACCCTATCACCAACTTTTGAATGAAGGGGAATATCTATAGCAATGACCTGGCCTCTGGGAAATGCTAAACTGCAAACTTCAGCCACCAGCCTCGTGTCCCATAACTGCATCGTGGCATAGGGAAACCACCCACCCTCCATACTTGAGGTTGGTAGTCAAGGCCCCCCCAGTCCCCATGTCTCAAAAAAGTTAACCAGAGCCACTCCCAATGACTTTTGCTAACCAAGCTTGTTTTTAACGCACTTATCTCTCTAATTCAACTTGGGGTCAACAACGCTCTTATTCTTTCTTTTTTTCTTTTTTCATGGTTATCAACTCAATTTTAGATAATACAGAAGCAAAATAAGCCTCAAACTTGTCGAAGGCGATTCCTTCCCGTTCTTGCATTGACGTCCCTTGAAACCACCTAGAGGGTTGAAAGATGCAAGCTGAAGGTCAAAGATCACAAAAGGACCATCAAGTTGAGTCGGTTTAATTTGTTTGAGCAATATATGTTGGTTTGGTTTATTTCATAAAATATAAAATAAAAAAACTAGTCTATTGATTTAGATTTTAAAGTTGAGTCGGTTTAATTTGTTTGAGAATTCCTCTAAACGAGACTCTGTCCCTTTAAAAACTTTTTGGTTTCTCTTGAACCATTCTCCAAAGATTGGCTGTCATGGCATTGGACCACAAAACAAACAAGAGCGAGCCCCTTAAAAGGAGAGCCTTCCAAAAGCTGCGAAAGGGTGGTTCAACCTTTTGGGAACACTAGTCTAAGAGAAAAGAACGAAAGAGCTTTGACGTCAACCAACTAGGAGGCTTGAAAGGGTCACTGCAAAAATACGTGATGATGATTCTATAAATTACTTTTAAACATGATATTTGCTAAAGTCAAAGAAAACCAGCAGATGTGGGAGCTTCCTTCGGATTGCCCATCATCTTTGGATCAAAGGATAACTTTCATCTTCTTTGGAACCTTGGCCTTTCAATCACATTGATTAGGAATTGATGAAGAGCGGTCTCTCTCATTGATGTAGGGGGTGAGAGCCCACTGTTAAGCAGCTTCTGCTGTGGAGTATCCTACCATCCAGAATCCTGCTGGATGCTAGGCTGAGTGTGGATAATCAGGTTTTGGAGTCTAATCCATTCCATCTCAATATCAGACAGATTCCTCCTAAGCTGCAATTTCAACTGGTGGGCGTCTTATGACCAGCAATGGCTCATGGTGAGCTGCTTTGATTTTGCTACATTGTCAGAGGGTTGCTACCTGTCCAATCATCCCCCCTGAAGGAGACTAACCACTCTTGTTCTTTTCCAGCTAAATTTTTCATAAGATATCAAAAAACTACCCTCCAAAAAAAAAAAAAGAAAAAGGATGTCACAAAATGGTGGATTTAAGAATACTTGCACTGGCATGTCAAGACAATCTCAAGAGGGGGCGAGACAGGTCGAAAATATTTTAAAAAAGAAACTCTCCCAATTTAGGATATCCTGACAGAGGAGCAGCCTTGGAATATATGGTTCAAATTTGTACTCATGTTTGCATAGAACAAACCACTGAGGCCCCAGCATAAGACAATAAAATCTCTAGATAATTTCATAGGTATTAATCCTCCCATAAGAGACAAACCAAAGAACTTTATCTTCTTTGCAGTGTGAATTTCCATAGCTTTGTGAAAAAGGAAGAGAGATATTTTTTGGTAAAAGAAACATTCATTAATAAACCAGGGGAAGAACCCCAAGTATACAAAAGTTACCGGAGGGAAAACCAATTACTGACTAAAAAAGATAAGTTCAAATGAGTAAAAGGTTGCTTAGTTTTACACCAAGAAAAAGCGGTAGATAAAACAAGTTCCACAAAACGAGGAAAAAATGAAAAAGAATCATTAAAAAGTTGTCTGTTCCTTTTACCCCATAAGCTCAACAAGAAAGCACGAGTAATGGCCAACCAAATTGTCTTTTTAGTACCACCAAAGGGATGACCCACCAATAAAGATGCTGATGCTTCAGAGATGTTATTTGGGCAAGTATAGGACTATCCAAAAGCAGGCAGAATAAAGTCCCAAAAATTAGCAGCAAAGGTGCAGTGCGAGAATAAATGAACCGGCGTTTCAGCGTGCCTACGACACATATGACGACAAGATGGAGAAAGAGACATATAAGGCAAACGACGTTGCAAACGGTCCACAGTATTAATGGCACCCCAACTAAGCTCCCAAAGAAAGATCTTAATCTTTTTGGGATATCTATCTTTCCAGATCACAGAGTAAAGATCCGACCAACCAAAATTCAAATCTCCCATTAAATCAGCCATCAGGAAGAGATAGATAGATAGGCAACCGGTTGCCAGGTTAAGGCATTTGCCCTCCACAAATCAGATGTTCAAATCCACCCCTAAATTTTGTGTTGAACTATATAAAAGGATATATGGGCAAGTGTTTCATCCAAATATAGTTTCGAACAGAGAAAATATCTGAAGGTTCAAGGAAACCTGTTTTCAATTCTTGTTGTGGTTGTTTGTATAGCCTGGCTTTGTATACTTTAATGTGGTTTCCATTCAGTACAAACTTACTTGATATTTGCATAAAAATTTATCCATTGGCCGTGTTCCCTGTGACAAGACTATGCAGTACCTTACAAAAGTGAAACTAAATAAAAGACTTAGTCCGATCTATAATTTCACTAAAAGAGCTTGCATTTGTCCCTGGATCATTTTACTTGATGCATTATAAGACCTCTTTTTTTTCTTCTTTTAAATCAATTCAGCAGTATTTTCTTTATTGTGTTCCACCTCGACGGATCCTCATATTATTATTTATCTTTCAACTCTTTGTGCATTGATTTATCTTTTGGATAAAGTTACCATTCTCAAGATGATTGACAATAAACTTCATCCTTCTTTATATCAGGCGCCAAAAGTGTATCCTTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

mRNA sequence

ATGGCAGGCAGGCTAAGCAATTTGGGTTCAAAGATCCTTGGTGGAAATGGTGTTGTTGGTCGCTCAATCGTTTCATCTCTTCGACTTCGCTCCGGTATGGGCCTTCCTGTCGGCAGACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTTCTTTTCCCGAGCCCTGTATTGATCGTATTGCAGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGCGCCAAAAGTGTATCCTTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

Coding sequence (CDS)

ATGGCAGGCAGGCTAAGCAATTTGGGTTCAAAGATCCTTGGTGGAAATGGTGTTGTTGGTCGCTCAATCGTTTCATCTCTTCGACTTCGCTCCGGTATGGGCCTTCCTGTCGGCAGACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTTCTTTTCCCGAGCCCTGTATTGATCGTATTGCAGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGCGCCAAAAGTGTATCCTTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

Protein sequence

MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVELGGEPEA
Homology
[Close]
BLAST of HG10003147.1 vs. NCBI nr
Match: XP_038903151.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 5.3e-65
Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLSNL S+ILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLSSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of HG10003147.1 vs. NCBI nr
Match: XP_004147198.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_010471 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 2.6e-64
Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT 
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of HG10003147.1 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLSNLGS+ILGGNGVV RSI SSLR RSGMGLPVG+HIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of HG10003147.1 vs. NCBI nr
Match: XP_022950674.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata] >XP_023538880.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6596853.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGE EA
Sbjct: 121 LGGEAEA 127

[Close]
BLAST of HG10003147.1 vs. NCBI nr
Match: XP_023005602.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGE EA
Sbjct: 121 LGGEAEA 127

[Close]
BLAST of HG10003147.1 vs. ExPASy Swiss-Prot
Match: Q9FGK0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.2e-57
Identity = 103/125 (82.40%), Postives = 113/125 (90.40%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLS + S+I+GGNGVV RS+ SSLR R+GMGLPVG+HIVPDKPL VNDEL+WDNGT+
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

[Close]
BLAST of HG10003147.1 vs. ExPASy TrEMBL
Match: A0A0A0L5J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT 
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of HG10003147.1 vs. ExPASy TrEMBL
Match: A0A1S3BK37 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT 
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of HG10003147.1 vs. ExPASy TrEMBL
Match: A0A6J1HN93 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465142 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLSNLGS+ILGGNGVV RSI SSLR RSGMGLPVG+HIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of HG10003147.1 vs. ExPASy TrEMBL
Match: A0A6J1KTK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498540 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.3e-64
Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGE EA
Sbjct: 121 LGGEAEA 127

[Close]
BLAST of HG10003147.1 vs. ExPASy TrEMBL
Match: A0A6J1GGJ2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111453696 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.3e-64
Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGE EA
Sbjct: 121 LGGEAEA 127

[Close]
BLAST of HG10003147.1 vs. TAIR 10
Match: AT5G47570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-58
Identity = 103/125 (82.40%), Postives = 113/125 (90.40%), Query Frame = 0 

Query: 1   MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTS 60
           MAGRLS + S+I+GGNGVV RS+ SSLR R+GMGLPVG+HIVPDKPL VNDEL+WDNGT+
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

The following BLAST results are available for this feature:
BLAST of HG10003147.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903151.15.3e-6596.06NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Beni... [more]
XP_004147198.12.6e-6494.49NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_022965223.14.5e-6495.28NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_022950674.11.7e-6393.70NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
XP_023005602.11.7e-6393.70NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
BLAST of HG10003147.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGK04.2e-5782.40NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Ar... [more]
BLAST of HG10003147.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5J81.3e-6494.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1[more]
A0A1S3BK371.3e-6494.49NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A6J1HN932.2e-6495.28NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A6J1KTK98.3e-6493.70NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
A0A6J1GGJ28.3e-6493.70NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
BLAST of HG10003147.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47570.13.0e-5882.40unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36401:SF2BNAC02G33360D PROTEINcoord: 1..125
IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialPANTHERPTHR36401NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIALcoord: 1..125

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
HG10003147HG10003147gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
HG10003147.1-cdsHG10003147.1-cds-Chr11:17993937..17994074CDS
HG10003147.1-cdsHG10003147.1-cds-Chr11:17994171..17994257CDS
HG10003147.1-cdsHG10003147.1-cds-Chr11:17994339..17994434CDS
HG10003147.1-cdsHG10003147.1-cds-Chr11:17999640..17999702CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
HG10003147.1HG10003147.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005747 mitochondrial respiratory chain complex I