HG10002358.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002358.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Eukaryotic initiation factor 4A
Location	Chr11: 5950833 .. 5960356 (+)
Sequence length	1758
RNA-Seq Expression	HG10002358.1
Synteny	HG10002358.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGATCTCAAGGTCCCTATTCAACTATCTATTCCTTTCAATTCCCTATATGTGTGTTTTTTGCACTTGGGTTACCTGTTTGGATTGATATTTAGGGTTTTAATTAAGAAACTCGAGGGGGGACTGACTGAAATATTGCGGGATTTTTGTTCAAGTTTAGCTTTGGTTTGTTTAGAATCAAATGGTATTCGCCTGGTTTACTTGCAATTTCTATAGCTAAACTCAGTTGGTTGAGTGGTTTAACATGGAAGAAATTGGGTTTATTCTTAAATTTTCAAACAAATATATATATTTCTCCGATGCTCTCCAACAGTTTTCTACGTTGATTTTTGGACTGAACTTTACTTTATGGTTTGCCCGTAGTTTTGCTTTTGATCAACTGAGTAATGTAAGAAGATTTTCTTCAGAAAGTGGAACTTGAGGTGGTATTTAAATATTAAATATATGATGGCGCGTTTTTTAGCTTGCTTCAATGGAAGCCATGTACTTGGTTGGTTGACACTTGCTGCCATCTAGGGGCGATAATAAATTCATAGGGTAGGGTTGGCTTGTGAGGGGAGATTCATGGCAATGGCCATTGATTACCCTAAGGCTTAAAGTTATGTCTGGATAACGCTATTCTAGTGGACCCCAAGTAACTGTGGCCTTGGATGAACTGTATAAGACCTTCTTCGAGTCTGTTCCTAGATGCATCTTTGAGATTACTTATGTTCCAGTATTACTTGAAACAATGATGATATGGGTTTTATTCGCCTCAAATTTAAGGTTTGGATATAAGTAAATCCCCTTGATTAAAAATCTTATGTCTTTCCTGTAACTTTAAAATAATGTGTACTCGTAACAGCATGACTATCTAACTAATAATTTCTGCAACTATTTATCTCTCTCGTGTTGCTTATGTACCCAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGTTCCTAAAGCAAAAGCTATTGTTGCTGCTATTTCTAACAACCAAAGCTCTGCTCCTGCTAAGCTTAATGCATCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTTCCAAGGTCTGTCTCTCTAACTGTTTAGGTATTTTACATTTGTAGCATAGAAGTCATCTGTTTATTATTGTTAGTATTATTTTCTTGGACCTCATGGGAGAGGGGGGAGCGTGTTTATAAAACCAGCTTTCCCCCTCCCTCCACTCACCACCACCTACCCCACCTCAGTCCACAAGCGAAGGAAAGATAAAAGAGTAGTTTATAAACACGTTGATGGAAAATGGAATATCTGATGAAATAATTTTAGATAGAAATGGAATAGAAACCCAAATCATATTAATCTTATAGTATTTTATTCGTCAACAAAATATTATAGTACATTTTGTTTGCTCTATTATAAATTATGATTGGGTCTGTGGAATGTTGTTTTTCTTTACTATTGACAATTGTAGACAGTGGAGTCTTGTGACTTTTTTTTACACATGAGAAAATTCATCTTTTATTTATTTTTTTTCCACCTTTTTTTCCCTCTCTTTCCCTGATTGAGAAAATTCACCTTTTACTTTTGTAATTGAAAGGAACGAATTGTATTTAATCTACCTCAAGAGAAATTTTGCCAGTAGAGAAATCCCTGAAGGGTGTTGTGATTGACCTTCTTTTCATATTCATTTATTATTTCGTTGAAGTCTCATCATTGGTCTTATAATGATCTGTTGACCAGGTATTATTCAATGATTTTTGAAGCCCTTTCAACTATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGGTAAGATGGCAGTGTCTTTTCGTTTCTTCTCTTCTTTTCTTTTATTTTTATTAAAGGAGCGATGGCAGTACTCTTATTTGAGACAATGATCTGCATGGAGATCATGATTATATTTTTACTCTGGCCAAACACTCAGTTTTCCGAGAAGGTTATTTTAACCTACCATTTCCACACTTTCGTTATGTATTTGTGAAATATGGGGTTGCTTCTTGCTTTCTTAGCTTCTTTGAACTATTTTCGTTATTCATTAACATCATTGATCAATGTTTATGTTCGTATCACATGATATTTCAACCGTTGATTTCACATGATGCAGCAAAGGCATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCGAAGTTGAGGAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTGAACGATCTCTTCATTTTCATACCGAATCAGTTCAGAAGGCAATTTGTTGGTTCTATGTTATTTTATATGCTTTACTAAGTTATGTAGTTTGACTCTTATATATGCTTCTCTTATACGTATATCCCCTTCCCCCACTAAAAGAAAACCTTGTATCCTTATGGGAAAATTTAAGTGCGTGTTTGGGATAAGGAGTAGAATAGTGAGGAGTAAGGATTTATGAAGTTTAGAGAGTTCTGAACTCTTGTAAGGAGTGGATAAGATATCAAATTGATGTTTCTTAGTAGTGAGACCCACTAACTTCTTGGATCAAACAAGGAGTGGAGTTCACAACTCCTACTTCCTAACATCTTGGGCCAAACATACCCTAAGATGTTACACATACATTTGAGGAAAAGTTACGCTTTTGGTCCCTAAGGTTTGGGACTTAGGTTAGGTAGCATTTTGGTCCATGCAGTCAATTTTCTGTTACTATAGTTTATAGCTTTAATGAAAGATGATTCGGCACTTTTTTAAAATAAATTAAAATAAAGTTCTTTTTCCTTCTCTTTTCTCTTTCTCCCTCTTCCCATCCTCTTCCCTCCCCCATCCATGGCCACTGCCACTGCTCCCACCGTTGTCCATTGTCCCTTTTTTTTCCCTCTTCCTTTCATTTTCTTCTCTTATCTTTTCCATTTCTTCTTTCCTCGTCTTCTCTCTCCTTCCTCCTCATTCCTCCCCTTCCCACGTCTAATGTAAGGAAAGGAAAAGGAAATCCCGTTTCAGATGAAACAGAGGAGTTTCAAGCATCTCCCTCGTTTCTGTGGCGAGGATGTCCCTTTTTTTTTTGGTTAAAATAATTTCTCTTTTATTTAAAATAATAATAATAAATGTGAGGAGAGAAGGGAAAGAGAAAGAAGAAGAAGACAGTAAGAAGAGGAAAGGAGAGAAAAGAACAAAGAAGAAAAGCGAAGATAAAAGAAAGAGGTGAGGGCAGTGGCGGTAATGCCCATGGATGGGAGGAGGGAGAAAGAAGAGATAGAAAAAAAGAAAATATTATTTTTATTTAAAAATGTAAAAAATAATTTTAATTAAAAAAAAGTCCCATGTCGCTTTTGTTATTATACTTATGTTTGAACTACATTGTGCTTCCACTTTTCAACCAATCACGAGGAGTTTCTTGACCTTTTTCATTGTTAACAATCGATATTAACAACTTGGGGATTAGCTGGTCTTTATATTATTGATAAGTAGGAGTTATGTGATGACATGGGATTGCGGTTGTGAACAGCTTTGTAGGAGTTTAAATATTTGTTTGAAATTTTTATGCGTGTGTTTCATTGTTATCTCTCTGCCACATTACAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACTACGGGAGCGGTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAAGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATGTAAGTGAAGTGTTCATTCTATTCCTCATGAAGTACTGCCGCTTTGGAACTCTTCTAAAACAACCTCTCTTTTTCTTTGTGTAATGTCACAGGTTCTCGTGGTGAAATTATTCTCTTGGCTTAGATCACTTGTAAGTTCAATGGCCAATCCTTTGTTGTTTTTGGAATTCGCATGTAAATTCTTCAATCCAGTGGAATTTTCAGCCTTCTCTATGCCTCCAAATTCCACGTTGCCTTTTTTTTGTTTTCCTTTCTCGGGACGAAATCGAATTAATTTATAGTTAGGTATACAAATATTTATCAAGATGTTCTTCAAATGAACTTGTGTTTGAGTTGGAATTTGGTTAGACAGAGTTACAACAAACCCAAATTCCCTAAGAAGTGGTTAGTCGTTTTTGGTTTGGTAGTTTCCTCCCAGGATATTAAGGTCATAATTGATTCATTTTTCCAAAAATAGTTTTTTTTTTTTCAAAACAAAAAACAAATAAGAAACACAATAACGTTGGAAACAACAATTATTCGTTGCATTTAAAACAAAGTAAGAAATTTGGGTGTAATGTTGGATATTTTTGGCTAATTTGATTAACTTCTCCTTGAATTTTGCATGATTTGTCAACTCTTTTCAATCAGCCTATCCTTTTCAACTGCTGAGGTGAAGTTGCAAGATCTTTTAATTTTGAGTTAATAAGCAGAAATTACAACCTCGATTACTGCTTTATTAAATTCGTTAAATTCGAGAACTTAAAACAACATATCAAGCCATTTTGCTAAATATTAATAATAATAAACTAAGCGAAAATCCAAAGCAAGCTATTTTCTTGTGGGACTTTATGTTAATCTAACTATGAAGACAATTTAGAGCTATTGCTATTAAAAAAAAAAAACAAAGAAAATTTTCCCCATCACTATTGTTTTATGTGCTAGAAAAGTCTTAACTTGGGTGGTTTTTTAGTAAAATAAGTTTGGAAAAGTAAATAATGTCGTCACCTTGTTAATAGTGGAATGAAAAAAAATACATACGTAACACTTTAATGAAGAAAGTTTGCTTTATCAATTTTATTTTTTTAAAAAATATTTAACACTCAAAGGGCACATAAGAGGTTTGAAATGCTAGTTAGTTGAAATATATTCATAAATTCAAAAAGTTATATTTGTATATGTTAAAAATAATATAAACTATTAGGGTATTGTTTTTTTTTTTTGTTAAAACTATTAATATACATAGAATGTAATTTATAGATATTATAAATTATCAATTAGGTGTTTAAAATTAAAGTTAAGATTTAAAAAATGTGATGTATATTCCACAGATGTATTATAATTTATTATTATTGAAATAGTAATTTAATAATTATAATTTAAATTAACGAAATGACATTTTTTAAACTATAATGATAGCCCAAAAACGTAGAGATGAAAAAAAAGAAGGACATGCACACGTTCAATCACACGCAAGTCACGTGACTAATGATTACAAAGTCCATATTCCAAGGGTATTAAAGTAATAAAAAATAAAGTAAGGGTAAAGATGTAATTTGATACCGCAGATTTGGAGCAGAAGCCGAAAGGCCAGAGGGCCGCCTTAGAAAACCTAACGCCCTCGCATTATAACTTCAGTCCTTAAGCATCAGCCTCCTTTTCAACTCCACGGCGCAGATCCGAGGAGTTTGTGAATCTCTCGCTATCTTCCAACGCTTTCTAATCTTCTTCCAATCTTTCGTCTCTCACTGATCTACAGGTTTCTCTCTACCTCCTTTCTTATATCTATTGTTGATATCGATTTCTATTGATTCACCGTGAATGCTCTGTTTTTACTTTTCTTAATCTTCCCGGTGACCTCTTGCTTGGATTTAGTCAGTTTTTGTCTTGTTGTAATCTCTGAAATCGATTTCTGCTGGATCTGGTATCGGTTTCTACGTTTTTTTTGTCGAGCTTTTTGTTATTGTTTTTTTGTTTGAACGTCGATCGTCTCTGTGTGTTTTTTGTTTGAGAAATCTGCTGCTTGTGAGATATGAATAGGTTTTAGATGATTATTAAAGCGTTTTTTAAGTGTATATTAAGATTAGTTGATGTTTTGGACATGCGCTGTGAGATTATGTGGTATGGAGTTTAGAAACTTGACTTACTTGGCTAATCTTTTTCTCTAATGCCTCTCGGGAGGTGGATGATGCGGACGTAGCAGTATCGGAGGAGATTTTCTTCTCTGAGGTGCTTCTGTTGTAATAATTTGTTCGATTGCTCATATGACACACTCGCGCTGCTTTGTATATTGTTTTAACGTTTCATTTTGATAATATCTCCACGCGAAATATCCAATGAGTCTTTTCCCCTTAGTTTTCTTCTAATATTTTTTTCTTTATTATTTGATTCTAATCCAAGCGGAAACTTTCCATGCTTTCTGTACGTTCCACCATTTATTCATGAAGTTTGGGGAGCGGTGAAGTGGCTTCTGATGCCGGAAGATTTTACTGATACATCAGCTAGCCATTCTCATTTTTTATTAACATCTCCCGAAAAAAATAGACAGAATTTTAATGCTTGCACTCTTCTTTGTCTGGTGTGCAAGTTTGGCTTTCTGTTACATTTTCTCGTCCACCTTTTTACCCTCCGATTCGGGTCAAGAAAGTTAAAAGTTAATTTCTTCATCTTGTTTGGAACCAGAAAGTTCTGTAATGGATGTACATTAAACTTTGTGTTTTGATGTTTGCTAGAAAAGAAATTTACAAATATAGGCTTTTTATTATTAATTTATCAGCAGCAAATTGAAATATGACAGGGTTATATAAGTAATTAGCCTCCAAATTCTATGAAATCCTGCAAACCATTCTTTCTTCTCATATAATAACAAATAACAGAGTTCGTTTGTACTCTATGATGAATTTGGAATCCCTCAAGACCAGGAAGAACCTAATAGATCATCAGGGTTTGATATCATTGGAAATTTCCACGGATCAAACATGTTTAATCCTTGTTTTATTTTATTTTTTCCACGTGGCATGTGTTCAGAATTTTGTGCAGTCTTCTTTTCCTCTATTAACGTTTACATTTGGCAATGCTGAAATTAAAGGTCGTGTGAGCTTGAGTGAGCTTCTTGTTACTGTCTTTGTAACAATTTTTTAACCACAAAGTACCCCCATGTTGTATATGTTGTCTGTATACAGATATGGCTGGTTTGGCTCCAGAAGGTTCTCAATTTGATGCTCGTCAGTATGACACGAAAATGAACGAGTTGTAAGTTTTCTGTTTTAACTTTTCTGGACATCCTAGACGATGTGTATGCAATATTATTAAGATTCATTGTATTTTATCATCTTGATTTTTTTGTAACCTCCTAATCCTAGTTTCCTTCTTATTTGTTATTATCTCTTGGTCAATGTAGACTTTCGGCTGATGGACAAGATTTCTTCACATCATACGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTGGTATATAGCACTATTTATTTTTCTCCTTAAGTTGTTTATTGTTTTGTTTTTCCTATGTAACAATTAATAATTAAGCAAACTGTATGGTTTTCTAAGTAGTAGTTGTTTACTCTGTTGCTCTGGCTGGTTTGCAATATATTCTATTGTAATTTGAATGTCGTTTTTAAAGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACAGGGAAGACTGCTACTTTTTGCTCTGGCATTTTGCAGCAACTTGATTATGGTCTCGTTCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCACAACAGATAGAGAAGGTTATGCGAGCCCTTGGTGATTATCTTGGTGTGAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTACGTGAAGACCAACGTATTCTTCAAGCTGGTGTTCATGTAGTTGTTGGTACACCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCCGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGGTTTGTAATTTTACTTGTACTTTCATGACTCTATCGTCCTGCATGCGTGGAAGCTTTGTTTTAGTTTATTACACTGTTTTTAATTTTTCCCGTCTCTCTCTCTCTCTCTCTCTCTCCACTCTTTAAGATGGCAATACGTTGTTGCCTGGAGTGTGTTATAAATTTAGTTTAGCTTATGCCAATATTATTTCCACCATGATAAAGAGCATTCTGAGGAGTAAGTCATCTATACTTCTTTGGCGTTGTGATGTAAGTTGTAAGATATGAACAACAGAAGAGTTTGATCATTGGCTCGCTTTAAATTTTTTATGGTATGCTGCTTTTCTTGTTTTCCTTTATTAAAGTATTTGCTTTCTTATTTTTCATCAAGAATTTTGAAGTGAATCAGTGATTATGGATTGTCATCCTGACAGTTTGTTTGATAAGTTGTCACTTGTCAACAAGACATGTTATGAACTGTTTAAGTTCTCTGTTTTTAGTTGCATAAAAATTTCTCGAAGATGTAGAAAATGATGTAGGATGCTTCCAAATCCAATGTTCTCTCTTCAATCTTTTACTGAGAATTATTGGTAATGAAGTTTGTAGCTGTTCGCTTATTTTGCTCTCCATGTGGTGTGATTTGTTATATCTATTTTAATTCTATACTTCATCATTCTTCAGTGTACAGAATCCGTATTCAGGAATCATAGTTTTGTACTTTGCTCATTGTCTTGGAACTGTTCGCATATTTGAGTTGTGCGGTTTCAATCTTCTAACTGTCCTTATACATGTTTATCCCCATTGCAGATTTATGATATTTTCCAGCTGCTACCATCCAAGATTCAGGTTGGGGTCTTCTCTGCTACAATGCCTCCTGAAGCCCTTGAGATCACCAGGAAGTTCATGAACAAGCCCGTTAGAATTCTTGTAAAGCGTGATGAGCTGACTTTGGAAGGTATCAAGCAGTTCTATGTTAATGTTGACAAGGAAGACTGGAAGCTTGAGACTCTCTGTGATCTTTATGAGACTTTGGCCATCACCCAGAGTGTTATCTTCGTCAATACTCGACGTAAAGTTGATTGGCTCACTGATAAGATGCGGAGCCGTGACCACACTGTGTCTGCTACCCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGTTCAGGTTCTTCAAGGGTTCTGATTACCACTGATCTATTGGCTCGTGGTATCGATGTCCAGCAGGTTTCTCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAACTACCTTCATCGTATAGGAAGAAGTGGACGTTTTGGAAGAAAAGGTGTTGCGATCAACTTTGTAACGACAGAGGACGAAAGAATGCTATTCGACATTCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCAGCCAATGTTGCTGATCTGCTGTGA

mRNA sequence

ATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGATCTCAAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGTTCCTAAAGCAAAAGCTATTGTTGCTGCTATTTCTAACAACCAAAGCTCTGCTCCTGCTAAGCTTAATGCATCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTTCCAAGGTATTATTCAATGATTTTTGAAGCCCTTTCAACTATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGCAAAGGCATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCGAAGTTGAGGAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACTACGGGAGCGGTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAAGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATATATGGCTGGTTTGGCTCCAGAAGGTTCTCAATTTGATGCTCGTCAGTATGACACGAAAATGAACGAGTTACTTTCGGCTGATGGACAAGATTTCTTCACATCATACGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACAGGGAAGACTGCTACTTTTTGCTCTGGCATTTTGCAGCAACTTGATTATGGTCTCGTTCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCACAACAGATAGAGAAGGTTATGCGAGCCCTTGGTGATTATCTTGGTGTGAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTACGTGAAGACCAACGTATTCTTCAAGCTGGTGTTCATGTAGTTGTTGGTACACCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCCGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGATGCGGAGCCGTGACCACACTGTGTCTGCTACCCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGTTCAGGTTCTTCAAGGGTTCTGATTACCACTGATCTATTGGCTCGTGGTATCGATGTCCAGCAGGTTTCTCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAACTACCTTCATCGTATAGGAAGAAGTGGACGTTTTGGAAGAAAAGGTGTTGCGATCAACTTTGTAACGACAGAGGACGAAAGAATGCTATTCGACATTCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCAGCCAATGTTGCTGATCTGCTGTGA

Coding sequence (CDS)

ATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGATCTCAAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGTTCCTAAAGCAAAAGCTATTGTTGCTGCTATTTCTAACAACCAAAGCTCTGCTCCTGCTAAGCTTAATGCATCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTTCCAAGGTATTATTCAATGATTTTTGAAGCCCTTTCAACTATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGCAAAGGCATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCGAAGTTGAGGAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACTACGGGAGCGGTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAAGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATATATGGCTGGTTTGGCTCCAGAAGGTTCTCAATTTGATGCTCGTCAGTATGACACGAAAATGAACGAGTTACTTTCGGCTGATGGACAAGATTTCTTCACATCATACGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACAGGGAAGACTGCTACTTTTTGCTCTGGCATTTTGCAGCAACTTGATTATGGTCTCGTTCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCACAACAGATAGAGAAGGTTATGCGAGCCCTTGGTGATTATCTTGGTGTGAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTACGTGAAGACCAACGTATTCTTCAAGCTGGTGTTCATGTAGTTGTTGGTACACCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCCGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGATGCGGAGCCGTGACCACACTGTGTCTGCTACCCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGTTCAGGTTCTTCAAGGGTTCTGATTACCACTGATCTATTGGCTCGTGGTATCGATGTCCAGCAGGTTTCTCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAACTACCTTCATCGTATAGGAAGAAGTGGACGTTTTGGAAGAAAAGGTGTTGCGATCAACTTTGTAACGACAGAGGACGAAAGAATGCTATTCGACATTCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCAGCCAATGTTGCTGATCTGCTGTGA

Protein sequence

MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVSTASQGSKEKSRVPKAKAIVAAISNNQSSAPAKLNASADTAGDDTPNNSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKVKKDNSLAVKTPTPKQKDVRQRISQYTTGAVMPSGETVEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL

Homology

[Close]

BLAST of HG10002358.1 vs. NCBI nr
Match: KGN59924.2 (hypothetical protein Csa_001589 [Cucumis sativus])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 577/683 (84.48%), Postives = 580/683 (84.92%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST
Sbjct: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60

Query: 61  ASQGSKEKSR-VPKAKAIVAAISNNQSSAPAKLNASADTAGDDTPNNSTQDGKNVPRYYS 120
           ASQGSKEKSR  PKAKAIVAAISNNQ+SAPAK NASAD AGDDTPNNSTQDGKNVPRYYS
Sbjct: 61  ASQGSKEKSRAAPKAKAIVAAISNNQTSAPAKPNASADAAGDDTPNNSTQDGKNVPRYYS 120

Query: 121 MIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKV 180
           MIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCY+V
Sbjct: 121 MIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYRV 180

Query: 181 KKDNSLAVKTPTPKQKDVRQRISQY-TTGAVMPSGETVEDAAKAAAYKVADAENKSFLAA 240
           KKDNSLAVKTPTPKQKDVRQRISQY TTG VMPS ETVEDAAKAAAYKVADAENKSFLAA
Sbjct: 181 KKDNSLAVKTPTPKQKDVRQRISQYNTTGGVMPSAETVEDAAKAAAYKVADAENKSFLAA 240

Query: 241 EAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYDTKMNELLSADGQD 300
           EAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYD+KMNELLSADGQD
Sbjct: 241 EAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYDSKMNELLSADGQD 300

Query: 301 FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK 360
           FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK
Sbjct: 301 FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK 360

Query: 361 TATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 420
           TATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE
Sbjct: 361 TATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 420

Query: 421 DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQ-------- 480
           DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQ        
Sbjct: 421 DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLL 480

Query: 481 ------------------------------------------------------------ 540
                                                                       
Sbjct: 481 PSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETL 540

Query: 541 ----------------------------MRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 586
                                       MRSRDHTVSATHGDMDQNTRDIIMREFRSGSS
Sbjct: 541 CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 600

[Close]

BLAST of HG10002358.1 vs. NCBI nr
Match: CAF2197740.1 (unnamed protein product, partial [Brassica napus])

HSP 1 Score: 755.7 bits (1950), Expect = 2.9e-214
Identity = 422/707 (59.69%), Postives = 490/707 (69.31%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  LT+RSNIDLKDKWRNL V+ 
Sbjct: 20  MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFAHQLTNRSNIDLKDKWRNLCVAP 79

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
            +Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 80  GTQCSNDKSRTRKVKEEGVTLASLSPTAATATPPSYPNSSSSSPATSLPRSASSDFSVDN 139

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 140 NFAVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 199

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK K+   +  Q Y       S E 
Sbjct: 200 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPKETNVKPRQSYINQPPSVSQEM 259

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPE 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A E
Sbjct: 260 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKEFMAGMASE 319

Query: 301 GSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAI 360
           G+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAI
Sbjct: 320 GTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAI 379

Query: 361 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 420
           QQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEK
Sbjct: 380 QQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLLQCQALVLAPTRELAQQIEK 439

Query: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMF 480
           VMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLR D I+MF
Sbjct: 440 VMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRADAIKMF 499

Query: 481 VLDEADEMLSRGFKDQ-------------------------------------------- 540
           VLDEADEMLSRGFKDQ                                            
Sbjct: 500 VLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRD 559

Query: 541 ----------------------------------------------------MRSRDHTV 586
                                                               MRSRDHTV
Sbjct: 560 ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 619

[Close]

BLAST of HG10002358.1 vs. NCBI nr
Match: KAG2254048.1 (hypothetical protein Bca52824_084184 [Brassica carinata])

HSP 1 Score: 755.4 bits (1949), Expect = 3.7e-214
Identity = 422/707 (59.69%), Postives = 490/707 (69.31%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  L++RSNIDLKDKWRNL V+ 
Sbjct: 1   MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFADQLSNRSNIDLKDKWRNLCVAP 60

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
           A+Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 61  ATQCSNDKSRTRKVKEEGVTLASLSPTAAAATPPPYANSSSSSPATSLPRSASSDFSVDN 120

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 121 NFVVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 180

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK  +   +  Q Y       S E 
Sbjct: 181 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPMETNVKPRQSYINQPPSVSQEM 240

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPE 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A E
Sbjct: 241 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKQFMAGMASE 300

Query: 301 GSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAI 360
           G+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAI
Sbjct: 301 GTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAI 360

Query: 361 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 420
           QQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVQCQALVLAPTRELAQQIEK
Sbjct: 361 QQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEK 420

Query: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMF 480
           VMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLR D I+MF
Sbjct: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRADAIKMF 480

Query: 481 VLDEADEMLSRGFKDQ-------------------------------------------- 540
           VLDEADEMLSRGFKDQ                                            
Sbjct: 481 VLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRD 540

Query: 541 ----------------------------------------------------MRSRDHTV 586
                                                               MRSRDHTV
Sbjct: 541 ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 600

[Close]

BLAST of HG10002358.1 vs. NCBI nr
Match: CAG7904465.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 754.2 bits (1946), Expect = 8.3e-214
Identity = 421/707 (59.55%), Postives = 490/707 (69.31%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  LT+RSNIDLKDKWRNL V+ 
Sbjct: 20  MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFAHQLTNRSNIDLKDKWRNLCVAP 79

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
            +Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 80  GTQCSNDKSRTRKVKEEGVTLASLSPTAATATPPSYPNSSSSSPATSLPRSASSDFSVDN 139

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 140 NFAVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 199

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK K+   +  Q Y       S E 
Sbjct: 200 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPKETNIKPRQSYINQPPSVSQEM 259

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPE 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A E
Sbjct: 260 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKEFMAGMASE 319

Query: 301 GSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAI 360
           G+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAI
Sbjct: 320 GTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAI 379

Query: 361 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 420
           QQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEK
Sbjct: 380 QQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLLQCQALVLAPTRELAQQIEK 439

Query: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMF 480
           VMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLR D I+MF
Sbjct: 440 VMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRADAIKMF 499

Query: 481 VLDEADEMLSRGFKDQ-------------------------------------------- 540
           VLDEADEMLSRGFKDQ                                            
Sbjct: 500 VLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRD 559

Query: 541 ----------------------------------------------------MRSRDHTV 586
                                                               MRSRDHTV
Sbjct: 560 ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 619

[Close]

BLAST of HG10002358.1 vs. NCBI nr
Match: CAF2064460.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 751.9 bits (1940), Expect = 4.1e-213
Identity = 420/704 (59.66%), Postives = 488/704 (69.32%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  L++RSNIDLKDKWRNL V+ 
Sbjct: 1   MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFADQLSNRSNIDLKDKWRNLCVAP 60

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
           A+Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 61  ATQCSNDKSRTRKVKEEGVTLASLSPTAAAATPPPYANSSSSSPATSLPRSASSDFSVDN 120

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 121 NFVVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 180

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKTPTPKQKDVRQRISQ-YTTGAVMPSGETVED 240
           +QGKL KV N       YK+  D S     PTPK K+   +  Q Y       S E +++
Sbjct: 181 AQGKLSKVSNSKPLLNFYKL-PDGSETTPAPTPKPKETNIKPRQSYINQPPSVSQEMIDE 240

Query: 241 AAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQ 300
           AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A EG+Q
Sbjct: 241 AAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKQFMAGMASEGTQ 300

Query: 301 FDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQR 360
           +D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAIQQR
Sbjct: 301 YDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAIQQR 360

Query: 361 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMR 420
           GI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEKVMR
Sbjct: 361 GIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLLQCQALVLAPTRELAQQIEKVMR 420

Query: 421 ALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLD 480
           ALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSL  D I+MFVLD
Sbjct: 421 ALGDYLGVKVHACVGGTSVREDQRILHSGVHVVVGTPGRVFDMLRRQSLPADAIKMFVLD 480

Query: 481 EADEMLSRGFKDQ----------------------------------------------- 540
           EADEMLSRGFKDQ                                               
Sbjct: 481 EADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRDELT 540

Query: 541 -------------------------------------------------MRSRDHTVSAT 586
                                                            MRSRDHTVSAT
Sbjct: 541 LEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT 600

[Close]

BLAST of HG10002358.1 vs. ExPASy Swiss-Prot
Match: P41381 (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.9e-161
Identity = 302/413 (73.12%), Postives = 315/413 (76.27%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MA LAP+G+QFDARQYD+KMN+LL+ADG+DFFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL AGVHV+VGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQ-------------------------------------- 508
           DY+RMFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVR 240

Query: 509 ----------------------------------------------------------MR 568
                                                                     MR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 586
           +RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 TRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

[Close]

BLAST of HG10002358.1 vs. ExPASy Swiss-Prot
Match: Q40467 (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 7.9e-159
Identity = 300/413 (72.64%), Postives = 310/413 (75.06%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYD KM ELL  + ++FFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQ-------------------------------------- 508
           D+I+MFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVR 240

Query: 509 ----------------------------------------------------------MR 568
                                                                     MR
Sbjct: 241 ILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 586
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

[Close]

BLAST of HG10002358.1 vs. ExPASy Swiss-Prot
Match: P41382 (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 6.7e-158
Identity = 299/413 (72.40%), Postives = 309/413 (74.82%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYD KM ELL  + ++FFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQ-------------------------------------- 508
           D+I+MFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ----------------------------------------------------------MR 568
                                                                     MR
Sbjct: 241 ILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 586
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

[Close]

BLAST of HG10002358.1 vs. ExPASy Swiss-Prot
Match: Q40468 (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.6e-157
Identity = 300/413 (72.64%), Postives = 310/413 (75.06%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAG APEGSQFDARQ+DTKMNELLSADGQDFFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL Y L++CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKV ACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQ-------------------------------------- 508
           D+I+MFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ----------------------------------------------------------MR 568
                                                                     MR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 586
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP 360

[Close]

BLAST of HG10002358.1 vs. ExPASy Swiss-Prot
Match: Q40465 (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 5.7e-157
Identity = 298/413 (72.15%), Postives = 307/413 (74.33%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYD KM ELL  + Q+FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQ-------------------------------------- 508
           D I+MFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ----------------------------------------------------------MR 568
                                                                     MR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 586
            RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

[Close]

BLAST of HG10002358.1 vs. ExPASy TrEMBL
Match: M4DHR0 (MYB transcription factor OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 1.6e-207
Identity = 419/727 (57.63%), Postives = 486/727 (66.85%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  LT+RSNIDLKDKWRNL V+ 
Sbjct: 1   MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFAHQLTNRSNIDLKDKWRNLCVAP 60

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
            +Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 61  GTQCSNDKSRTRKVKEEGVTLASLSPTAATATPPSYPNSSSSSPATSLPRSASSDFSVDN 120

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 121 NFAVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 180

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK K+   +  Q Y       S E 
Sbjct: 181 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPKETNVKPRQSYINQPPSVSQEM 240

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQI----------IKEMY 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++          +  +Y
Sbjct: 241 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELSWRGCGLGLSLWGLY 300

Query: 301 EK----------YMAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMG 360
            +           MAG+A EG+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M 
Sbjct: 301 RRAQQCVYIHPLVMAGMASEGTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTME 360

Query: 361 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 420
           L+ +LLRGIYAYGFEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L
Sbjct: 361 LRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTL 420

Query: 421 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 480
           +QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ GVHVVVGTP
Sbjct: 421 LQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQYGVHVVVGTP 480

Query: 481 GRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQ------------------------ 540
           GRVFDMLRRQSLR D I+MFVLDEADEMLSRGFKDQ                        
Sbjct: 481 GRVFDMLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPE 540

Query: 541 ------------------------------------------------------------ 586
                                                                       
Sbjct: 541 ALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFV 600

[Close]

BLAST of HG10002358.1 vs. ExPASy TrEMBL
Match: A0A6D2JQ16 (MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS30283 PE=3 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 3.0e-201
Identity = 416/731 (56.91%), Postives = 478/731 (65.39%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT+EEE+ALLAG+ KHGPGKWKNIL+DP+F+  L +RSNIDLKDKWRNLSV+ 
Sbjct: 1   MGNQKLKWTAEEEEALLAGIKKHGPGKWKNILRDPEFSDQLINRSNIDLKDKWRNLSVAP 60

Query: 61  ASQGSKEKSRVPKAK--------AIVAAISN-NQSSAP---AKLNASADTAGDDTPNNST 120
             Q SK+K R  K K        AI    SN N SS P       A +D   DD   N+ 
Sbjct: 61  GIQVSKDKPRPVKVKGEGVTQDTAITTPPSNPNPSSKPPPSLPRTAPSDLTSDD-GYNTV 120

Query: 121 QDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQG 180
            D KN PRY  MIFEAL  + D++G DI +I  FIE RH VPQNFRR L+S+LRRL SQ 
Sbjct: 121 ADSKNAPRYDGMIFEALFALADADGSDISSIYTFIESRHHVPQNFRRILTSRLRRLASQE 180

Query: 181 KLEKV------QNCYKVKK--DNSLAVKTPTPKQKDVRQRISQYTTGAVMPSGETVEDAA 240
           KL K+      QN YK+ +  +  +    P    K+   +  Q    A   S   +E+AA
Sbjct: 181 KLVKISILKPLQNFYKIPEGAETRIPPIIPPKPAKETNTKPRQSNNQASAISNVMIEEAA 240

Query: 241 KAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYE-------------- 300
             AAYK+ +AENK  ++  AV+E  ++ K+A+ ++ +L++ KEM+E              
Sbjct: 241 ITAAYKLVEAENKIGVSKAAVEELVKMNKLADLSEHLLKLAKEMHEHCSRDPRSFALCLL 300

Query: 301 ---------------KYMAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSF 360
                            MAG+A EG+Q+D RQ+D+KMN +L  +G++ F+T  DEV DSF
Sbjct: 301 LNLSFSFSLVNLLTTSVMAGMAAEGTQYDPRQFDSKMNAILGEEGEETFYTISDEVCDSF 360

Query: 361 DSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 420
           D+M L+ +LLRGIYAYGFEKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSG+LQQL
Sbjct: 361 DAMELKSDLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGVLQQL 420

Query: 421 DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 480
           DY LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ GVHVV
Sbjct: 421 DYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQTGVHVV 480

Query: 481 VGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQ-------------------- 540
           VGTPGRVFDMLRRQSLR D I+MFVLDEADEMLSRGFKDQ                    
Sbjct: 481 VGTPGRVFDMLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSAT 540

Query: 541 ------------------------------------------------------------ 586
                                                                       
Sbjct: 541 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQS 600

[Close]

BLAST of HG10002358.1 vs. ExPASy TrEMBL
Match: A0A6D2HRH4 (MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5678 PE=3 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 2.7e-194
Identity = 401/701 (57.20%), Postives = 464/701 (66.19%), Query Frame = 0


Query: 2   GNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVSTA 61
           G +  KWT+EEE ALLAG+ KHG GKW +I+ DP  +  L  R+NI LKDKWRN  +   
Sbjct: 3   GRRNNKWTAEEESALLAGIAKHGVGKWSDIVDDPLLSAQLAGRNNIQLKDKWRN--IQKR 62

Query: 62  SQGSKEKSRVPKAKAIVAAISNNQSSAPAKLNASADTAGDDTPNNSTQDGKNVPRYYSMI 121
            +  +EKS   K +AI +A   N S+       S   + + +PN S  D  N  RY++M+
Sbjct: 63  GRLVEEKS---KTQAIKSASIPNSSA-----KTSPVVSNEPSPNRSL-DMSNESRYHAMV 122

Query: 122 FEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKVKK 181
           FEA+STI D NG D+  I++FIE+R+EVPQNF + LS  LR LVSQG LEKV N YK+  
Sbjct: 123 FEAISTIDDENGSDLIGILSFIEERYEVPQNFTKLLSKSLRALVSQGNLEKVLNRYKI-- 182

Query: 182 DNSLAVKTPTPKQKDVRQRISQYTTGAVMPSGETVEDAAKAAAYKVADAENKSFLAAEAV 241
                                     +VM   + +E +    A ++A AE K+F+AAEAV
Sbjct: 183 --------------------------SVMEC-KVLEISPDVVAKRIAVAEKKAFIAAEAV 242

Query: 242 KEAERIAKMAEDTDSMLQIIKEMYEK--------------------YMAGLAPEGSQFDA 301
           KEAER+ ++AE+++  LQ++ +++E+                     MAG APEGSQFD 
Sbjct: 243 KEAERMQQLAEESELTLQLVLDIHEQCALGKRVFLRSYLSPSTQSPVMAGSAPEGSQFDT 302

Query: 302 RQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIV 361
           RQ+D K+NE+L  +GQD FFTSYDEV++SFD+MGLQENLLRGIYAYGFEKPSAIQQRGIV
Sbjct: 303 RQFDQKLNEVL--EGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 362

Query: 362 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALG 421
           PFC GLDVIQQAQSGTGKTATFCSG+LQQLD+ LVQCQALVLAPTRELAQQIEKVMRALG
Sbjct: 363 PFCNGLDVIQQAQSGTGKTATFCSGVLQQLDFTLVQCQALVLAPTRELAQQIEKVMRALG 422

Query: 422 DYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEAD 481
           DYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD I+MFVLDEAD
Sbjct: 423 DYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEAD 482

Query: 482 EMLSRGFKDQ-------------------------------------------------- 541
           EMLSRGFKDQ                                                  
Sbjct: 483 EMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEG 542

Query: 542 ----------------------------------------------MRSRDHTVSATHGD 586
                                                         MR RDHTVSATHGD
Sbjct: 543 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTEKMRGRDHTVSATHGD 602

[Close]

BLAST of HG10002358.1 vs. ExPASy TrEMBL
Match: A0A175YLQ0 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_028273 PE=3 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 3.9e-169
Identity = 299/317 (94.32%), Postives = 311/317 (98.11%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFD  QYD+KM++LLS+DGQDFFTSYDEVYDSFD MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDTNQYDSKMSDLLSSDGQDFFTSYDEVYDSFDGMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +V+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNVVECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL AGVHVVVGTPGRVFDMLRRQSLR 
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRS 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 508
           DYI+MFVLDEADEMLSRGFKDQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 240

Query: 509 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQK 568
           DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTT+D+RMLFDIQK
Sbjct: 241 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDQRMLFDIQK 300

Query: 569 FYNVVIEELPANVADLL 586
           FYNV++EELP+NVADLL
Sbjct: 301 FYNVIVEELPSNVADLL 317

[Close]

BLAST of HG10002358.1 vs. ExPASy TrEMBL
Match: A0A314XWS9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_09081 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 5.7e-168
Identity = 303/330 (91.82%), Postives = 314/330 (95.15%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAG+APEGSQFDA+QYDTKM+ELLS DGQ+FFTSYDEVY+SFDSMGLQENLLRGIYAYGF
Sbjct: 1   MAGVAPEGSQFDAKQYDTKMSELLSTDGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVQCQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKD-------------QMRSRDHTVSATHGDMDQNTRDIIMR 508
           DYI+MFVLDEADEMLSRGFKD             QMRSRDHTVSATHGDMDQNTRDIIMR
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQMRSRDHTVSATHGDMDQNTRDIIMR 240

Query: 509 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 568
           EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV
Sbjct: 241 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 300

Query: 569 TTEDERMLFDIQKFYNVVIEELPANVADLL 586
           T +DERML+DIQ+FYNVVIEELP+NVADLL
Sbjct: 301 TKDDERMLYDIQRFYNVVIEELPSNVADLL 330

[Close]

BLAST of HG10002358.1 vs. TAIR 10
Match: AT1G54270.1 (eif4a-2 )

HSP 1 Score: 541.2 bits (1393), Expect = 1.0e-153
Identity = 292/414 (70.53%), Postives = 308/414 (74.40%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFD RQ+D ++NE+L  DGQD FFTSYDEV++SFD+MGLQENLLRGIYAYG
Sbjct: 1   MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQ------------------------------------- 508
           PD I+MFVLDEADEMLSRGFKDQ                                     
Sbjct: 181 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 -----------------------------------------------------------M 568
                                                                      M
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 586
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

[Close]

BLAST of HG10002358.1 vs. TAIR 10
Match: AT3G13920.1 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 539.7 bits (1389), Expect = 3.0e-153
Identity = 291/414 (70.29%), Postives = 309/414 (74.64%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFDARQ+D K+NE+L  +GQD FFTSYD+V++SFD+MGLQENLLRGIYAYG
Sbjct: 1   MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQ------------------------------------- 508
            D I+MFVLDEADEMLSRGFKDQ                                     
Sbjct: 181 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 -----------------------------------------------------------M 568
                                                                      M
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 586
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

[Close]

BLAST of HG10002358.1 vs. TAIR 10
Match: AT1G54270.2 (eif4a-2 )

HSP 1 Score: 524.2 bits (1349), Expect = 1.3e-148
Identity = 287/414 (69.32%), Postives = 303/414 (73.19%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFD RQ+D ++NE+L  DGQD FFTSYDEV++SFD+MGLQENLLR     G
Sbjct: 1   MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLR-----G 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQ------------------------------------- 508
           PD I+MFVLDEADEMLSRGFKDQ                                     
Sbjct: 181 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 -----------------------------------------------------------M 568
                                                                      M
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 586
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

[Close]

BLAST of HG10002358.1 vs. TAIR 10
Match: AT3G13920.4 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 522.7 bits (1345), Expect = 3.8e-148
Identity = 286/414 (69.08%), Postives = 304/414 (73.43%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFDARQ+D K+NE+L  +GQD FFTSYD+V++SFD+MGLQENLLR     G
Sbjct: 1   MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLR-----G 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQ------------------------------------- 508
            D I+MFVLDEADEMLSRGFKDQ                                     
Sbjct: 181 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 -----------------------------------------------------------M 568
                                                                      M
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 586
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

[Close]

BLAST of HG10002358.1 vs. TAIR 10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 516.9 bits (1330), Expect = 2.1e-146
Identity = 276/414 (66.67%), Postives = 302/414 (72.95%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG+A +G+Q+D RQ+DTKMN +L  +G++ F+T+YDEV DSFD+M LQ +LLRGIYAYG
Sbjct: 1   MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD  LVQCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDYLGVK  ACVGGTSVREDQR+LQ+GVHVVVGTPGRVFD+LRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQ------------------------------------- 508
            D I+MFVLDEADEMLSRGFKDQ                                     
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240

Query: 509 -----------------------------------------------------------M 568
                                                                      M
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 586
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

The following BLAST results are available for this feature:

BLAST of HG10002358.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59924.2	0.0e+00	84.48	hypothetical protein Csa_001589 [Cucumis sativus]	[more]
CAF2197740.1	2.9e-214	59.69	unnamed protein product, partial [Brassica napus]	[more]
KAG2254048.1	3.7e-214	59.69	hypothetical protein Bca52824_084184 [Brassica carinata]	[more]
CAG7904465.1	8.3e-214	59.55	unnamed protein product, partial [Brassica rapa]	[more]
CAF2064460.1	4.1e-213	59.66	unnamed protein product [Brassica napus]	[more]

BLAST of HG10002358.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41381	2.9e-161	73.12	Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40467	7.9e-159	72.64	Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P41382	6.7e-158	72.40	Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40468	2.6e-157	72.64	Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40465	5.7e-157	72.15	Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of HG10002358.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M4DHR0	1.6e-207	57.63	MYB transcription factor OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1	[more]
A0A6D2JQ16	3.0e-201	56.91	MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS30283...	[more]
A0A6D2HRH4	2.7e-194	57.20	MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5678 ...	[more]
A0A175YLQ0	3.9e-169	94.32	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_028273 ...	[more]
A0A314XWS9	5.7e-168	91.82	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_090...	[more]

BLAST of HG10002358.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54270.1	1.0e-153	70.53	eif4a-2	[more]
AT3G13920.1	3.0e-153	70.29	eukaryotic translation initiation factor 4A1	[more]
AT1G54270.2	1.3e-148	69.32	eif4a-2	[more]
AT3G13920.4	3.8e-148	69.08	eukaryotic translation initiation factor 4A1	[more]
AT1G72730.1	2.1e-146	66.67	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 457..546 e-value: 1.9E-29 score: 113.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 445..585 score: 21.632908
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 4..59 e-value: 2.7E-8 score: 43.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..57 score: 8.466847
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 111..176 e-value: 5.4E-14 score: 62.5
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 115..174 e-value: 6.7E-10 score: 39.2
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 113..181 score: 24.37525
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 327..507 e-value: 1.5E-36 score: 137.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 339..500 score: 22.712927
None	No IPR available	GENE3D	1.10.246.220		coord: 8..86 e-value: 3.4E-20 score: 73.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..113
None	No IPR available	PANTHER	PTHR47958:SF65	SUBFAMILY NOT NAMED	coord: 469..578
None	No IPR available	PANTHER	PTHR47958:SF65	SUBFAMILY NOT NAMED	coord: 273..471
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 469..578 coord: 273..471
None	No IPR available	CDD	cd11660	SANT_TRF	coord: 6..56 e-value: 5.62203E-22 score: 87.2375
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 469..555 e-value: 2.20598E-43 score: 149.58
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 110..197 e-value: 2.4E-12 score: 48.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 279..506 e-value: 3.2E-54 score: 185.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 304..485
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 375..581
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 5..56 e-value: 1.8E-9 score: 37.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..61 score: 14.374061
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 333..485 e-value: 6.5E-35 score: 120.5
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 455..463
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 308..336 score: 10.696912
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..58
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 110..192

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10002358	HG10002358	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10002358.1-cds	HG10002358.1-cds-Chr11:5950833..5950982	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5951878..5952074	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5952730..5952814	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5953131..5953214	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5954559..5954844	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5958006..5958075	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5958224..5958330	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5958504..5958934	CDS
HG10002358.1-cds	HG10002358.1-cds-Chr11:5960009..5960356	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10002358.1	HG10002358.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002183	cytoplasmic translational initiation
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003743	translation initiation factor activity