HG10002326.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002326.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	dof zinc finger protein DOF1.7-like
Location	Chr11: 5597460 .. 5598083 (-)
Sequence length	624
RNA-Seq Expression	HG10002326.1
Synteny	HG10002326.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGACCCATCAACGTTTCAGCCGATTAAACCCCAATTTCCCGAACAAGAGCAACTTAAATGCCCTCGTTGTGATTCTACGAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACTAAAGGCGGCGCTCTTCGCAACATCCCCGTCGGCGGTGGCACCCGGAAAAACTCCAAACGTGCCGTGGCTGCCACCGTCAAACGCCCGCCATCTTCCTCGTCTTCGTCTTCTTCGACCTTGACGAATCCGAACCCGATCACAGCGCCGGATCATAACCCGATCCGGGTTTACGGAGGTGGGCTGGATATTCCGGGGAGTTTCAGTTCGCTGCTGGCATCAAATGGGCAATTTGGGAATCTTTTGGAGGGTGTTGATCCGAATCAAACGGAGCTGAAAATGGTGGAATTGGGTGAATTTTCTGGGTCTGGCAGGAAATCTGCGGCGGAGGAACAGAGCGCCACCGTGCCGGAGAATTATTTGGGTGTTCTGCAAAATGGTGATTCTAATTGTTGGACCAGCGGCGGGAGTAATGGGTGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTATCAGTAA

mRNA sequence

ATGCAAGACCCATCAACGTTTCAGCCGATTAAACCCCAATTTCCCGAACAAGAGCAACTTAAATGCCCTCGTTGTGATTCTACGAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACTAAAGGCGGCGCTCTTCGCAACATCCCCGTCGGCGGTGGCACCCGGAAAAACTCCAAACGTGCCGTGGCTGCCACCGTCAAACGCCCGCCATCTTCCTCGTCTTCGTCTTCTTCGACCTTGACGAATCCGAACCCGATCACAGCGCCGGATCATAACCCGATCCGGGTTTACGGAGGTGGGCTGGATATTCCGGGGAGTTTCAGTTCGCTGCTGGCATCAAATGGGCAATTTGGGAATCTTTTGGAGGGTGTTGATCCGAATCAAACGGAGCTGAAAATGGTGGAATTGGGTGAATTTTCTGGGTCTGGCAGGAAATCTGCGGCGGAGGAACAGAGCGCCACCGTGCCGGAGAATTATTTGGGTGTTCTGCAAAATGGTGATTCTAATTGTTGGACCAGCGGCGGGAGTAATGGGTGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTATCAGTAA

Coding sequence (CDS)

ATGCAAGACCCATCAACGTTTCAGCCGATTAAACCCCAATTTCCCGAACAAGAGCAACTTAAATGCCCTCGTTGTGATTCTACGAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACTAAAGGCGGCGCTCTTCGCAACATCCCCGTCGGCGGTGGCACCCGGAAAAACTCCAAACGTGCCGTGGCTGCCACCGTCAAACGCCCGCCATCTTCCTCGTCTTCGTCTTCTTCGACCTTGACGAATCCGAACCCGATCACAGCGCCGGATCATAACCCGATCCGGGTTTACGGAGGTGGGCTGGATATTCCGGGGAGTTTCAGTTCGCTGCTGGCATCAAATGGGCAATTTGGGAATCTTTTGGAGGGTGTTGATCCGAATCAAACGGAGCTGAAAATGGTGGAATTGGGTGAATTTTCTGGGTCTGGCAGGAAATCTGCGGCGGAGGAACAGAGCGCCACCGTGCCGGAGAATTATTTGGGTGTTCTGCAAAATGGTGATTCTAATTGTTGGACCAGCGGCGGGAGTAATGGGTGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTATCAGTAA

Protein sequence

MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQTELKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQNGDSNCWTSGGSNGWPDLAIFTPGSSYQ

Homology

[Close]

BLAST of HG10002326.1 vs. NCBI nr
Match: XP_008447593.1 (PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo] >KAA0061093.1 dof zinc finger protein DOF1.7-like [Cucumis melo var. makuwa])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 194/207 (93.72%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPG 120
           RNIPVGGGTRKNSKRAVAATVKRPPSSSSS     T+PNPI  PDHNPIR YGGGLDIPG
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSS-----THPNPIAVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQFGNLLEGVDPNQTELKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180
           SFSSLLASNGQFGNLLEGVDPNQ+E+KMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180

Query: 181 GDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           GDSNCW+ GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of HG10002326.1 vs. NCBI nr
Match: XP_031737612.1 (dof zinc finger protein DOF1.7 [Cucumis sativus] >KGN59833.1 hypothetical protein Csa_002324 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 5.9e-106
Identity = 192/207 (92.75%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPG 120
           RNIPVGGGTRKNSKRAVAATVKRPPSS+SS     T+PN IT PDHNPIR YGGGLDIPG
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSS-----THPNTITVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQFGNLLEGVDPNQTELKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180
           SFSSLLASNGQFGNLLEGVDPNQ+E+KMVELGEFSGSGRKSAAEEQSA VPENYLGVLQN
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQN 180

Query: 181 GDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           GDSNCW  GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of HG10002326.1 vs. NCBI nr
Match: KAG6606726.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97
Identity = 184/213 (86.38%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIP 120
           RNIPVGGG+RKN+KR AV+ATVKRPPSSSSSSSS  T  NPIT PDHNPIR YGGGL+IP
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGST-LNPITGPDHNPIRGYGGGLEIP 120

Query: 121 GSFSSLLASNGQFGNLLEGVDPNQTELKMVELGEF-----SGSGRKSAAEEQSATVPENY 180
           GSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENY
Sbjct: 121 GSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENY 180

Query: 181 LGVLQNGDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           LGVLQNGDS+CWT GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 LGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of HG10002326.1 vs. NCBI nr
Match: KAG7036441.1 (Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.4 bits (934), Expect = 6.6e-97
Identity = 183/213 (85.92%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIP 120
           RNIPVGGG+RKN+KR AV+ATVKRPPSSSSSSSS  +  NPIT PDHNPIR YGGGL+IP
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSG-SMLNPITGPDHNPIRGYGGGLEIP 120

Query: 121 GSFSSLLASNGQFGNLLEGVDPNQTELKMVELGEF-----SGSGRKSAAEEQSATVPENY 180
           GSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENY
Sbjct: 121 GSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENY 180

Query: 181 LGVLQNGDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           LGVLQNGDS+CWT GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 LGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of HG10002326.1 vs. NCBI nr
Match: XP_022997902.1 (dof zinc finger protein DOF1.7-like [Cucurbita maxima])

HSP 1 Score: 364.4 bits (934), Expect = 6.6e-97
Identity = 182/213 (85.45%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIP 120
           RNIPVGGG+RKN+KR AV+ TVKRPPSSSSSSSS  +  NPIT PDHNPIR YGGGL+IP
Sbjct: 61  RNIPVGGGSRKNAKRPAVSTTVKRPPSSSSSSSSG-SMRNPITGPDHNPIRGYGGGLEIP 120

Query: 121 GSFSSLLASNGQFGNLLEGVDPNQTELKMVELGEF-----SGSGRKSAAEEQSATVPENY 180
           GSFSSLLASNGQ+GNLLEG+DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENY
Sbjct: 121 GSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGSGRKSAAEEQSGCVPENY 180

Query: 181 LGVLQNGDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           LG+LQNGDS+CWT GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 LGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of HG10002326.1 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 87/158 (55.06%), Postives = 106/158 (67.09%), Query Frame = 0


Query: 1   MQDPSTF---------QPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCR 60
           MQDP+ +         Q  +PQF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CR
Sbjct: 1   MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTKGGALRNIPVGGGTRKN-SKRAVAATVKRPPSSSSSSSSTLTNPNP------ITAP 120
           RYWTKGGALRN+PVGGG+RKN +KR+ +++      S+SS +    NP+P         P
Sbjct: 61  RYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKP 120

Query: 121 DHNPIRVYGG---------GLDIPGSFSSLLASNGQFG 134
           D +P R+  G         G++I GSFSSLLA+N Q G
Sbjct: 121 DLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]

BLAST of HG10002326.1 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-36
Identity = 88/152 (57.89%), Postives = 97/152 (63.82%), Query Frame = 0


Query: 5   STFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP 64
           +T +  +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP
Sbjct: 18  TTAKQNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP 77

Query: 65  VGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDH-----------------N 124
           VGGGTRK++KR           S SS SS L N      PDH                 N
Sbjct: 78  VGGGTRKSNKR-----------SGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMN 137

Query: 125 PIR-VYGGGLDIP--GSFSSLLASNGQFGNLL 137
           P R +YG  +  P   SFSSLLASN Q G L+
Sbjct: 138 PTRMLYGLPVGDPNGASFSSLLASNMQMGGLV 158

[Close]

BLAST of HG10002326.1 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 95/235 (40.43%), Postives = 117/235 (49.79%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 71
           P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTRK
Sbjct: 22  PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72  NSKRAVAATVKRPPSSSSSSSSTLTNPN-------PITAPD--------HNPIRVYGGG- 131
           ++KR+   +     SSSSS S  ++N N       P+  P         H      G G 
Sbjct: 82  SAKRSRTCS----NSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESDGKGS 141

Query: 132 -LDIPGSFSSLLASN----------------GQFG-NLLEGVDPNQTELKMVELGEFSGS 191
            L + GSF+S L ++                G FG  L  G D     L    +  FS  
Sbjct: 142 ALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGSGFDDVSFGLGRA-MWPFSTV 201

Query: 192 GRKSAAEEQS----ATVPENYLGVLQNGDSNC---WTSGGSNGWPDLAIFTPGSS 206
           G  +     S      VP       +  +SN    + SG    WPDL+I TPG+S
Sbjct: 202 GTATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGFVSGEYFAWPDLSITTPGNS 251

[Close]

BLAST of HG10002326.1 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 9.7e-27
Identity = 65/112 (58.04%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 18  EQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAV 77
           + LKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGG RK    A 
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK----AK 108

Query: 78  AATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPGSFSSLLASN 130
            +  K+ PSSSS+   T T        DH+       G       SSL ASN
Sbjct: 109 RSKTKQVPSSSSADKPTTTQ------DDHHVEEKSSTGSHSSSESSSLTASN 150

[Close]

BLAST of HG10002326.1 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 20  LKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAVAA 79
           LKCPRCDS+NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGG R+N+K+    
Sbjct: 77  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 136

Query: 80  TVKRPPSSSSSSSS 94
            +K   SSS  SSS
Sbjct: 137 NLKSSSSSSKQSSS 150

[Close]

BLAST of HG10002326.1 vs. ExPASy TrEMBL
Match: A0A5A7UYP4 (Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00020 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 6.8e-108
Identity = 194/207 (93.72%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPG 120
           RNIPVGGGTRKNSKRAVAATVKRPPSSSSS     T+PNPI  PDHNPIR YGGGLDIPG
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSS-----THPNPIAVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQFGNLLEGVDPNQTELKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180
           SFSSLLASNGQFGNLLEGVDPNQ+E+KMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180

Query: 181 GDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           GDSNCW+ GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of HG10002326.1 vs. ExPASy TrEMBL
Match: A0A1S3BHT0 (dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 6.8e-108
Identity = 194/207 (93.72%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPG 120
           RNIPVGGGTRKNSKRAVAATVKRPPSSSSS     T+PNPI  PDHNPIR YGGGLDIPG
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSS-----THPNPIAVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQFGNLLEGVDPNQTELKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180
           SFSSLLASNGQFGNLLEGVDPNQ+E+KMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180

Query: 181 GDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           GDSNCW+ GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of HG10002326.1 vs. ExPASy TrEMBL
Match: A0A0A0LDG2 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.9e-106
Identity = 192/207 (92.75%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPG 120
           RNIPVGGGTRKNSKRAVAATVKRPPSS+SS     T+PN IT PDHNPIR YGGGLDIPG
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSS-----THPNTITVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQFGNLLEGVDPNQTELKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQN 180
           SFSSLLASNGQFGNLLEGVDPNQ+E+KMVELGEFSGSGRKSAAEEQSA VPENYLGVLQN
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQN 180

Query: 181 GDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           GDSNCW  GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of HG10002326.1 vs. ExPASy TrEMBL
Match: A0A6J1K6C2 (dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.2e-97
Identity = 182/213 (85.45%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIP 120
           RNIPVGGG+RKN+KR AV+ TVKRPPSSSSSSSS  +  NPIT PDHNPIR YGGGL+IP
Sbjct: 61  RNIPVGGGSRKNAKRPAVSTTVKRPPSSSSSSSSG-SMRNPITGPDHNPIRGYGGGLEIP 120

Query: 121 GSFSSLLASNGQFGNLLEGVDPNQTELKMVELGEF-----SGSGRKSAAEEQSATVPENY 180
           GSFSSLLASNGQ+GNLLEG+DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENY
Sbjct: 121 GSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGSGRKSAAEEQSGCVPENY 180

Query: 181 LGVLQNGDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           LG+LQNGDS+CWT GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 LGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of HG10002326.1 vs. ExPASy TrEMBL
Match: A0A6J1GAD4 (dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC111452370 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.1e-97
Identity = 182/213 (85.45%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQ+PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQYPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIP 120
           RNIPVGGG+RKN+KR AV+ATVKRPPSSSSSSSS  +  NPIT PDHNPIR YGGGL+IP
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSG-SMLNPITGPDHNPIRGYGGGLEIP 120

Query: 121 GSFSSLLASNGQFGNLLEGVDPNQTELKMVELGEF-----SGSGRKSAAEEQSATVPENY 180
           GSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENY
Sbjct: 121 GSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENY 180

Query: 181 LGVLQNGDSNCWTSGGSNGWPDLAIFTPGSSYQ 208
           LGVLQNGDS+CWT GGSNGWPDLAIFTPGSSYQ
Sbjct: 181 LGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of HG10002326.1 vs. TAIR 10
Match: AT3G21270.1 (DOF zinc finger protein 2 )

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38
Identity = 87/158 (55.06%), Postives = 106/158 (67.09%), Query Frame = 0


Query: 1   MQDPSTF---------QPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCR 60
           MQDP+ +         Q  +PQF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CR
Sbjct: 1   MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTKGGALRNIPVGGGTRKN-SKRAVAATVKRPPSSSSSSSSTLTNPNP------ITAP 120
           RYWTKGGALRN+PVGGG+RKN +KR+ +++      S+SS +    NP+P         P
Sbjct: 61  RYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKP 120

Query: 121 DHNPIRVYGG---------GLDIPGSFSSLLASNGQFG 134
           D +P R+  G         G++I GSFSSLLA+N Q G
Sbjct: 121 DLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]

BLAST of HG10002326.1 vs. TAIR 10
Match: AT1G51700.1 (DOF zinc finger protein 1 )

HSP 1 Score: 152.9 bits (385), Expect = 2.8e-37
Identity = 88/152 (57.89%), Postives = 97/152 (63.82%), Query Frame = 0


Query: 5   STFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP 64
           +T +  +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP
Sbjct: 18  TTAKQNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP 77

Query: 65  VGGGTRKNSKRAVAATVKRPPSSSSSSSSTLTNPNPITAPDH-----------------N 124
           VGGGTRK++KR           S SS SS L N      PDH                 N
Sbjct: 78  VGGGTRKSNKR-----------SGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMN 137

Query: 125 PIR-VYGGGLDIP--GSFSSLLASNGQFGNLL 137
           P R +YG  +  P   SFSSLLASN Q G L+
Sbjct: 138 PTRMLYGLPVGDPNGASFSSLLASNMQMGGLV 158

[Close]

BLAST of HG10002326.1 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 124.8 bits (312), Expect = 8.1e-29
Identity = 95/235 (40.43%), Postives = 117/235 (49.79%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 71
           P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTRK
Sbjct: 22  PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72  NSKRAVAATVKRPPSSSSSSSSTLTNPN-------PITAPD--------HNPIRVYGGG- 131
           ++KR+   +     SSSSS S  ++N N       P+  P         H      G G 
Sbjct: 82  SAKRSRTCS----NSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESDGKGS 141

Query: 132 -LDIPGSFSSLLASN----------------GQFG-NLLEGVDPNQTELKMVELGEFSGS 191
            L + GSF+S L ++                G FG  L  G D     L    +  FS  
Sbjct: 142 ALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGSGFDDVSFGLGRA-MWPFSTV 201

Query: 192 GRKSAAEEQS----ATVPENYLGVLQNGDSNC---WTSGGSNGWPDLAIFTPGSS 206
           G  +     S      VP       +  +SN    + SG    WPDL+I TPG+S
Sbjct: 202 GTATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGFVSGEYFAWPDLSITTPGNS 251

[Close]

BLAST of HG10002326.1 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 )

HSP 1 Score: 121.7 bits (304), Expect = 6.9e-28
Identity = 65/112 (58.04%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 18  EQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAV 77
           + LKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGG RK    A 
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK----AK 108

Query: 78  AATVKRPPSSSSSSSSTLTNPNPITAPDHNPIRVYGGGLDIPGSFSSLLASN 130
            +  K+ PSSSS+   T T        DH+       G       SSL ASN
Sbjct: 109 RSKTKQVPSSSSADKPTTTQ------DDHHVEEKSSTGSHSSSESSSLTASN 150

[Close]

BLAST of HG10002326.1 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 20  LKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAVAA 79
           LKCPRCDS+NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGG R+N+K+    
Sbjct: 77  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 136

Query: 80  TVKRPPSSSSSSSS 94
            +K   SSS  SSS
Sbjct: 137 NLKSSSSSSKQSSS 150

The following BLAST results are available for this feature:

BLAST of HG10002326.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447593.1	1.4e-107	93.72	PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo] >KAA0061093.1 dof ...	[more]
XP_031737612.1	5.9e-106	92.75	dof zinc finger protein DOF1.7 [Cucumis sativus] >KGN59833.1 hypothetical protei...	[more]
KAG6606726.1	1.7e-97	86.38	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7036441.1	6.6e-97	85.92	Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022997902.1	6.6e-97	85.45	dof zinc finger protein DOF1.7-like [Cucurbita maxima]	[more]

BLAST of HG10002326.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AR6	1.6e-37	55.06	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]
O82155	3.9e-36	57.89	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]
Q39088	1.1e-27	40.43	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q8LDR0	9.7e-27	58.04	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
Q8L9V6	1.7e-26	72.97	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]

BLAST of HG10002326.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYP4	6.8e-108	93.72	Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BHT0	6.8e-108	93.72	dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4...	[more]
A0A0A0LDG2	2.9e-106	92.75	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE...	[more]
A0A6J1K6C2	3.2e-97	85.45	dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 ...	[more]
A0A6J1GAD4	7.1e-97	85.45	dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC11145237...	[more]

BLAST of HG10002326.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21270.1	1.1e-38	55.06	DOF zinc finger protein 2	[more]
AT1G51700.1	2.8e-37	57.89	DOF zinc finger protein 1	[more]
AT3G50410.1	8.1e-29	40.43	OBF binding protein 1	[more]
AT5G60850.1	6.9e-28	58.04	OBF binding protein 4	[more]
AT1G07640.2	1.2e-27	72.97	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 18..74 e-value: 2.2E-33 score: 114.2
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 22..58
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 20..74 score: 29.571478
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..108
None	No IPR available	PANTHER	PTHR31992:SF153	DOF ZINC FINGER PROTEIN DOF3.1-LIKE	coord: 2..207
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 2..207

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10002326	HG10002326	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10002326.1-cds	HG10002326.1-cds-Chr11:5597460..5598083	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10002326.1	HG10002326.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding