HG10000534.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000534.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	auxin-responsive protein SAUR24-like
Location	Chr09: 6263287 .. 6263580 (+)
Sequence length	294
RNA-Seq Expression	HG10000534.1
Synteny	HG10000534.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCAATTGCTTTCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTAGCTGTATATGTGGGAGAGATGCAAAGGAAGCGGTTCGTGGTTCCAATATCATACTTGAACCATCCATCATTCCAGCAATTGCTTAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCGCAGGGGGGTCTAACAATTCCTTGCAAAGTAGATACCTTCATTAATCTCACTTCAAGATTGCAAGTATTTTGA

mRNA sequence

ATGGGGATTCAATTGCTTTCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTAGCTGTATATGTGGGAGAGATGCAAAGGAAGCGGTTCGTGGTTCCAATATCATACTTGAACCATCCATCATTCCAGCAATTGCTTAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCGCAGGGGGGTCTAACAATTCCTTGCAAAGTAGATACCTTCATTAATCTCACTTCAAGATTGCAAGTATTTTGA

Coding sequence (CDS)

ATGGGGATTCAATTGCTTTCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTAGCTGTATATGTGGGAGAGATGCAAAGGAAGCGGTTCGTGGTTCCAATATCATACTTGAACCATCCATCATTCCAGCAATTGCTTAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCGCAGGGGGGTCTAACAATTCCTTGCAAAGTAGATACCTTCATTAATCTCACTTCAAGATTGCAAGTATTTTGA

Protein sequence

MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQVF

Homology

[Close]

BLAST of HG10000534.1 vs. NCBI nr
Match: XP_038900564.1 (auxin-responsive protein SAUR24-like [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 8.8e-44
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQILKMQ G TKSQ DVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQVGITKSQKDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQVF 98
          LLSHAEEEFGFHHPQGGLTIPCKVD FI+LT RLQVF
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTLRLQVF 97

[Close]

BLAST of HG10000534.1 vs. NCBI nr
Match: XP_038900563.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQILKMQP FTKSQLDVPKGHVAVYVGE+QRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQPSFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQ 96
          LLSHAEEEFGFHHPQGG+TIPCK D FI+LTSRLQ
Sbjct: 61 LLSHAEEEFGFHHPQGGITIPCKEDAFIDLTSRLQ 95

[Close]

BLAST of HG10000534.1 vs. NCBI nr
Match: XP_022947571.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6605023.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43
Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGE+QRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEEEFGFHHPQGGLTIPCK D FI+LTSRLQV
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of HG10000534.1 vs. NCBI nr
Match: XP_022944371.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata])

HSP 1 Score: 184.9 bits (468), Expect = 3.3e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+ LSLVPHAKQILKMQPGFTK+QLDVPKGHVAVYVGE+QRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEE+FGFHHPQGGLTIPCK D FI+LTSRL V
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHV 96

[Close]

BLAST of HG10000534.1 vs. NCBI nr
Match: XP_023533292.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.9 bits (468), Expect = 3.3e-43
Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGE+QRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEEEFGFHHPQGGLTIPCK D F++LTSRLQV
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQV 96

[Close]

BLAST of HG10000534.1 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL    G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKVDTFINLTSRLQ 96
           HP GGLTIPC  DTFIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of HG10000534.1 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.7e-24
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRS---TTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKVDTFINLTSRLQ 96
           HP GGLTIPC  DTFIN+TSR Q
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of HG10000534.1 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.0e-24
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF
Sbjct: 10 AKKILSRS---TAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 69

Query: 72 HHPQGGLTIPCKVDTFINLTSRLQ 96
           HP GGLTIPC  DTFIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of HG10000534.1 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRS---TAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKVDTFINLTSRLQ 96
           HP GGLTIPC  DTFIN+TSRLQ
Sbjct: 70 AHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of HG10000534.1 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-23
Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDTFIN 89
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC  DTFIN
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of HG10000534.1 vs. ExPASy TrEMBL
Match: A0A6J1G6T7 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451395 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGE+QRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEEEFGFHHPQGGLTIPCK D FI+LTSRLQV
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of HG10000534.1 vs. ExPASy TrEMBL
Match: A0A6J1KZJ6 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 88/96 (91.67%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGE+QRKRF+VPISYLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEEEFGFHHPQGGLTIPCK D FI+LTSRLQV
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of HG10000534.1 vs. ExPASy TrEMBL
Match: A0A6J1FU85 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111448836 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+ LSLVPHAKQILKMQPGFTK+QLDVPKGHVAVYVGE+QRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEE+FGFHHPQGGLTIPCK D FI+LTSRL V
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHV 96

[Close]

BLAST of HG10000534.1 vs. ExPASy TrEMBL
Match: A0A6J1CXV3 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015448 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-43
Identity = 88/96 (91.67%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQ+LK+Q GFTKSQLDVPKGHVAVYVGE+QRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKIQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEEEFGFHHPQGGLTIPCK D FI LTSRLQV
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQV 96

[Close]

BLAST of HG10000534.1 vs. ExPASy TrEMBL
Match: A0A6J1G6U1 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111451399 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQ 60
          MGI+LLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGE+QRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSRLQV 97
          LLSHAEEEFGFHHPQGGLTIPCK D F++LTSRL V
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHV 96

[Close]

BLAST of HG10000534.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 8.8e-26
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL    G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKVDTFINLTSRLQ 96
           HP GGLTIPC  DTFIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of HG10000534.1 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 1  MGIQLLSLVPHAKQILK----MQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHP 60
          M I++  ++  +KQIL+    +    + S LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPQGGLTIPCKVDTFINLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC  + FI+L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of HG10000534.1 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGIQLLSLVPHAKQILKMQPGFTKSQLD------VPKGHVAVYVG---EMQRKRFVVPIS 60
           MG+   ++    KQILK+     +++        VPKGHVAVYVG   EM++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDTFINL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+ + F++L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of HG10000534.1 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 3.3e-25
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRS---TTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKVDTFINLTSRLQ 96
           HP GGLTIPC  DTFIN+TSR Q
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of HG10000534.1 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.7e-25
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLDVPKGHVAVYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF
Sbjct: 10 AKKILSRS---TAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 69

Query: 72 HHPQGGLTIPCKVDTFINLTSRLQ 96
           HP GGLTIPC  DTFIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCHEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of HG10000534.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900564.1	8.8e-44	92.78	auxin-responsive protein SAUR24-like [Benincasa hispida]	[more]
XP_038900563.1	1.1e-43	92.63	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_022947571.1	2.6e-43	91.67	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-...	[more]
XP_022944371.1	3.3e-43	90.63	auxin-responsive protein SAUR23-like [Cucurbita moschata]	[more]
XP_023533292.1	3.3e-43	90.63	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10000534.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	1.2e-24	65.48	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	4.7e-24	65.48	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	8.0e-24	64.29	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	1.8e-23	64.29	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	3.1e-23	74.24	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of HG10000534.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6T7	1.2e-43	91.67	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1KZJ6	1.6e-43	91.67	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688...	[more]
A0A6J1FU85	1.6e-43	90.63	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1CXV3	2.8e-43	91.67	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G6U1	2.8e-43	90.63	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]

BLAST of HG10000534.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18080.1	8.8e-26	65.48	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.0e-25	56.70	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.6e-25	55.24	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.3e-25	65.48	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	5.7e-25	64.29	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..93 e-value: 6.4E-27 score: 93.6
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10000534	HG10000534	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10000534.1-cds	HG10000534.1-cds-Chr09:6263287..6263580	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10000534.1	HG10000534.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin