HG10000496.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000496.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	B-box zinc finger family protein
Location	Chr09: 5882797 .. 5883399 (+)
Sequence length	603
RNA-Seq Expression	HG10000496.1
Synteny	HG10000496.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCCGTTGTGATGTTTGCGAGAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCGGCCCTCTGCGCCGCCTGTGATCGCCACGTCCACCTTGCAAACAAGCTCGCCGGGAAACACGACCGTTTCTCTCTCCTCCAATCCACCGGCGCCGCCGCTGCCGCCAATTCACTTCCGTTGTGCGATATCTGCCAGGTCCGGCGAGCTTTTCTGTTCTGTCGCGAAGACAGAGCAATACTCTGTAGAGAATGTGATATTCCAATTCATGGCACTAGCGATCACACCCAGAAGCACAGCCGGTTTCTTCTCACCGGCGTGAAGGTCTCGCCGTCGCCGGCGACTTCTTCTACTTCTTCCTCCTCCTCCTCTGTCTCAGGCGGTGGCGAGGAAATTGAAGGTGAAATTGGGTTGTTGAAGAAGTGGTCAAGGAAGAGGGCTAAAATGGGGTGTAATAGTAAAGGGTTGGAGGAATTAGAGCAGCCATTGAATGTTGAAGAAAATGGAGTATCGTTTTCAAGAAGCAGTATTTCAGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTGGAGGAGTTTCTTGATTCTTCTATGTGCTGCTGA

mRNA sequence

ATGAAGATCCGTTGTGATGTTTGCGAGAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCGGCCCTCTGCGCCGCCTGTGATCGCCACGTCCACCTTGCAAACAAGCTCGCCGGGAAACACGACCGTTTCTCTCTCCTCCAATCCACCGGCGCCGCCGCTGCCGCCAATTCACTTCCGTTGTGCGATATCTGCCAGGTCCGGCGAGCTTTTCTGTTCTGTCGCGAAGACAGAGCAATACTCTGTAGAGAATGTGATATTCCAATTCATGGCACTAGCGATCACACCCAGAAGCACAGCCGGTTTCTTCTCACCGGCGTGAAGGTCTCGCCGTCGCCGGCGACTTCTTCTACTTCTTCCTCCTCCTCCTCTGTCTCAGGCGGTGGCGAGGAAATTGAAGGTGAAATTGGGTTGTTGAAGAAGTGGTCAAGGAAGAGGGCTAAAATGGGGTGTAATAGTAAAGGGTTGGAGGAATTAGAGCAGCCATTGAATGTTGAAGAAAATGGAGTATCGTTTTCAAGAAGCAGTATTTCAGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTGGAGGAGTTTCTTGATTCTTCTATGTGCTGCTGA

Coding sequence (CDS)

ATGAAGATCCGTTGTGATGTTTGCGAGAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCGGCCCTCTGCGCCGCCTGTGATCGCCACGTCCACCTTGCAAACAAGCTCGCCGGGAAACACGACCGTTTCTCTCTCCTCCAATCCACCGGCGCCGCCGCTGCCGCCAATTCACTTCCGTTGTGCGATATCTGCCAGGTCCGGCGAGCTTTTCTGTTCTGTCGCGAAGACAGAGCAATACTCTGTAGAGAATGTGATATTCCAATTCATGGCACTAGCGATCACACCCAGAAGCACAGCCGGTTTCTTCTCACCGGCGTGAAGGTCTCGCCGTCGCCGGCGACTTCTTCTACTTCTTCCTCCTCCTCCTCTGTCTCAGGCGGTGGCGAGGAAATTGAAGGTGAAATTGGGTTGTTGAAGAAGTGGTCAAGGAAGAGGGCTAAAATGGGGTGTAATAGTAAAGGGTTGGAGGAATTAGAGCAGCCATTGAATGTTGAAGAAAATGGAGTATCGTTTTCAAGAAGCAGTATTTCAGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTGGAGGAGTTTCTTGATTCTTCTATGTGCTGCTGA

Protein sequence

MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSLPLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTSSSSSSVSGGGEEIEGEIGLLKKWSRKRAKMGCNSKGLEELEQPLNVEENGVSFSRSSISEYLESLPGWCVEEFLDSSMCC

Homology

[Close]

BLAST of HG10000496.1 vs. NCBI nr
Match: XP_038902472.1 (B-box zinc finger protein 21-like [Benincasa hispida])

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-83
Identity = 173/204 (84.80%), Postives = 180/204 (88.24%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC+KEEASVFCPSDEAALCAACDRHVH ANKLAGKH+RFSLLQST  AAA +SL
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDRHVHRANKLAGKHNRFSLLQST--AAAVDSL 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATS-ST 120
           PLCDICQVRRAFLFCREDRAILCRECDI IH  SDHTQKHSRFLLTGVKVSPSPATS S+
Sbjct: 61  PLCDICQVRRAFLFCREDRAILCRECDISIHSISDHTQKHSRFLLTGVKVSPSPATSTSS 120

Query: 121 SSSSSSVSGGGEEIEGEIGLLKKWSRKRAKMGCNSKGLEEL-EQPLN-----VEENGVSF 180
           SSSSSSVSGGG+EIEGEIGLLKK S+KRAKM       EEL  QPLN     VEENG SF
Sbjct: 121 SSSSSSVSGGGKEIEGEIGLLKKCSKKRAKM-------EELPRQPLNVGKLEVEENGESF 180

Query: 181 SRSSISEYLESLPGWCVEEFLDSS 198
           +RSSISEYLESLPGWCVEEFLDSS
Sbjct: 181 TRSSISEYLESLPGWCVEEFLDSS 195

[Close]

BLAST of HG10000496.1 vs. NCBI nr
Match: KAG6571083.1 (B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010899.1 B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.3 bits (726), Expect = 8.3e-73
Identity = 156/214 (72.90%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC KEEASVFCPSDEAALC+ACD HVH ANKLA KH RF+LL+ST     ANS 
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRST---PTANSP 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQVRRAFLFC EDRAILCRECDIPIHG S+HTQKHSRFLLTGVKVSPSPA   TS
Sbjct: 61  PSCDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPA---TS 120

Query: 121 SSSSSVSGGGEE------IEGEIGLLKKWSRKRAKMGCNSKGL------EELEQPL---- 180
           SSSS+VSGGG +      IE EIG+ K  SRK+AKMG  SKGL      E+L+ P+    
Sbjct: 121 SSSSTVSGGGSDESEEVTIEAEIGIFKASSRKKAKMG--SKGLLRGPLMEDLQAPIVGNF 180

Query: 181 -NVEENGVSFSRSSISEYLESLPGWCVEEFLDSS 198
             + ENGVSFS S+ISEYLESLPGWCVEEFLDSS
Sbjct: 181 GGMSENGVSFSTSNISEYLESLPGWCVEEFLDSS 206

[Close]

BLAST of HG10000496.1 vs. NCBI nr
Match: XP_022944246.1 (B-box zinc finger protein 20-like [Cucurbita moschata])

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-72
Identity = 155/214 (72.43%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC KEEASVFCPSDEAALC+ACD HVH ANKLA KH RF+LL+ST      NS 
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRST---PTGNSP 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQVRRAFLFC EDRAILCRECDIPIHG S+HTQKHSRFLLTGVKVSPSPA   TS
Sbjct: 61  PSCDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPA---TS 120

Query: 121 SSSSSVSGGGEE------IEGEIGLLKKWSRKRAKMGCNSKGL------EELEQPL---- 180
           SSSS+VSGGG +      IE EIG+ K  SRK+AKMG  SKGL      E+L+ P+    
Sbjct: 121 SSSSTVSGGGSDESAEVTIEAEIGIFKASSRKKAKMG--SKGLLRGPLMEDLQAPIVGNF 180

Query: 181 -NVEENGVSFSRSSISEYLESLPGWCVEEFLDSS 198
             + ENGVSFS S+ISEYLESLPGWCVEEFLDSS
Sbjct: 181 GGMSENGVSFSTSNISEYLESLPGWCVEEFLDSS 206

[Close]

BLAST of HG10000496.1 vs. NCBI nr
Match: XP_023513248.1 (B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-72
Identity = 154/213 (72.30%), Postives = 168/213 (78.87%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC +EEASVFCPSDEAALC+ACD HVH ANKLA KH RF+LL+ST      NS 
Sbjct: 1   MKIRCDVCNREEASVFCPSDEAALCSACDHHVHCANKLAEKHSRFTLLRST---PTVNSP 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQVRRAFLFC EDRAILCRECDIPIHG S+HTQKHSRFLLTGVKVSPSP   +TS
Sbjct: 61  PSCDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSP---TTS 120

Query: 121 SSSSSVSGGGEE-----IEGEIGLLKKWSRKRAKMGCNSKGL------EELEQPL----- 180
           SSSSSVSGGG+E     IE EIG+ K  SRK AKMG  SKGL      E+L+ P+     
Sbjct: 121 SSSSSVSGGGDESEEVTIEAEIGIFKTRSRKEAKMG--SKGLIRGPVMEDLQPPIVGKFG 180

Query: 181 NVEENGVSFSRSSISEYLESLPGWCVEEFLDSS 198
            + ENGV+FS S+ISEYLESLPGWCVEEFLDSS
Sbjct: 181 GMSENGVAFSTSNISEYLESLPGWCVEEFLDSS 205

[Close]

BLAST of HG10000496.1 vs. NCBI nr
Match: XP_022986607.1 (B-box zinc finger protein 20-like [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 3.5e-71
Identity = 154/213 (72.30%), Postives = 166/213 (77.93%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI CDVC KEEASVFCPSDEAALC+ACD HVH ANKLA KH RF+L +ST     ANS 
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRST---PTANSP 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQVRRAFLF  EDRAILCRECDIPIHG S+HTQKHSRFLLTGVKVSPSPA   TS
Sbjct: 61  PSCDICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPA---TS 120

Query: 121 SSSSSVSGGGEE-----IEGEIGLLKKWSRKRAKMGCNSKGL------EELEQPL----- 180
           SSSSS+SGGG+E     IE EIG+ K  SRK AKMG  SKGL      E+L+ P+     
Sbjct: 121 SSSSSISGGGDESEEVTIEAEIGIFKARSRKEAKMG--SKGLLRGPLMEDLQAPIVGNFG 180

Query: 181 NVEENGVSFSRSSISEYLESLPGWCVEEFLDSS 198
            + ENGVSFS S+ISEYLESLPGWCVEEFLDSS
Sbjct: 181 GMSENGVSFSTSNISEYLESLPGWCVEEFLDSS 205

[Close]

BLAST of HG10000496.1 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.6e-45
Identity = 109/211 (51.66%), Postives = 133/211 (63.03%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI C VC+KEEASVFC +DEAALC  CDRHVH ANKLAGKH RFSL   T   A     
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDA----- 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           PLCDIC  RRA LFC+EDRAILCRECDIPIH  ++HT+KH+RFLLTGVK+S SP+    +
Sbjct: 61  PLCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRA 120

Query: 121 SSSSSVSGGG------EEIEGEI-----GLLKKWSRKRAKMGCNSKGLEELEQPLNVEEN 180
           S+S+S +  G      + +  E+       +   S       C   G+EE    ++   +
Sbjct: 121 SNSNSAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNC-YYGIEENYHHVSDSGS 180

Query: 181 GVSFSRSSISEYL-ESLPGWCVEEFLDSSMC 200
           G S    SISEYL E+LPGW VE+ L+   C
Sbjct: 181 G-SGCTGSISEYLMETLPGWRVEDLLEHPSC 204

[Close]

BLAST of HG10000496.1 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-43
Identity = 105/208 (50.48%), Postives = 136/208 (65.38%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC+KEEASVFC +DEA+LC  CD  VH ANKLA KH RFSLL     +++  S 
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLY---PSSSNTSS 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVS-------PS 120
           PLCDICQ ++A LFC++DRAILC++CD  IH  ++HT+KH RFLLTGVK+S       P+
Sbjct: 61  PLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPT 120

Query: 121 PATSSTSSSSSSVSGGGEEIEGEIGLLKKWSRKRAKMGCNSKGLEELEQPLNVEENGVS- 180
             +SS+SSS+   S  G  I     L K  S         S  ++   + +N  +  V+ 
Sbjct: 121 SKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPP-----QSNKIQPFSK-INGGDASVNQ 180

Query: 181 -FSRSSISEYL-ESLPGWCVEEFLDSSM 199
             S S+ISEYL ++LPGW VE+FLDSS+
Sbjct: 181 WGSTSTISEYLMDTLPGWHVEDFLDSSL 199

[Close]

BLAST of HG10000496.1 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 6.3e-31
Identity = 66/124 (53.23%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI+C+VCE  EA+V C +DEAALC ACD  +H ANKLAGKH R  L      +A+A+S+
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL------SASASSI 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQ    F FC +DRA+LCR+CD+ IH  + H   H RFLLTG+KV      +  S
Sbjct: 61  PKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPS 118

Query: 121 SSSS 125
           + SS
Sbjct: 121 TKSS 118

[Close]

BLAST of HG10000496.1 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.9e-29
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI+C+VCEK EA V C SDEA LC  CD  VH ANKL  +H R +L +   +A  A+  
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           PLCDICQ R+ + FC EDRA+LC +CD  IH  +     H RFLL+GV+VS    T + S
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQVSDQSLTEN-S 120

Query: 121 SSSSSVSGGGEEIEGEIGLLKKWSRKRAKMG 152
             S+S S    +I+ ++ L  ++S +  + G
Sbjct: 121 ECSTSFSSETYQIQSKVSLNSQYSSEETEAG 146

[Close]

BLAST of HG10000496.1 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.5e-28
Identity = 59/111 (53.15%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI+CDVCEK  A+V C +DEAALC  CD  +H ANKLA KH R  L       + +   
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL------NSLSTKF 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVS 112
           P CDICQ + AF+FC EDRA+LCR+CD  IH  +  +  H RFL TG+KV+
Sbjct: 61  PRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

[Close]

BLAST of HG10000496.1 vs. ExPASy TrEMBL
Match: A0A6J1FTW5 (B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 155/214 (72.43%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC KEEASVFCPSDEAALC+ACD HVH ANKLA KH RF+LL+ST      NS 
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRST---PTGNSP 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQVRRAFLFC EDRAILCRECDIPIHG S+HTQKHSRFLLTGVKVSPSPA   TS
Sbjct: 61  PSCDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPA---TS 120

Query: 121 SSSSSVSGGGEE------IEGEIGLLKKWSRKRAKMGCNSKGL------EELEQPL---- 180
           SSSS+VSGGG +      IE EIG+ K  SRK+AKMG  SKGL      E+L+ P+    
Sbjct: 121 SSSSTVSGGGSDESAEVTIEAEIGIFKASSRKKAKMG--SKGLLRGPLMEDLQAPIVGNF 180

Query: 181 -NVEENGVSFSRSSISEYLESLPGWCVEEFLDSS 198
             + ENGVSFS S+ISEYLESLPGWCVEEFLDSS
Sbjct: 181 GGMSENGVSFSTSNISEYLESLPGWCVEEFLDSS 206

[Close]

BLAST of HG10000496.1 vs. ExPASy TrEMBL
Match: A0A6J1J816 (B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.7e-71
Identity = 154/213 (72.30%), Postives = 166/213 (77.93%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI CDVC KEEASVFCPSDEAALC+ACD HVH ANKLA KH RF+L +ST     ANS 
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRST---PTANSP 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQVRRAFLF  EDRAILCRECDIPIHG S+HTQKHSRFLLTGVKVSPSPA   TS
Sbjct: 61  PSCDICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPA---TS 120

Query: 121 SSSSSVSGGGEE-----IEGEIGLLKKWSRKRAKMGCNSKGL------EELEQPL----- 180
           SSSSS+SGGG+E     IE EIG+ K  SRK AKMG  SKGL      E+L+ P+     
Sbjct: 121 SSSSSISGGGDESEEVTIEAEIGIFKARSRKEAKMG--SKGLLRGPLMEDLQAPIVGNFG 180

Query: 181 NVEENGVSFSRSSISEYLESLPGWCVEEFLDSS 198
            + ENGVSFS S+ISEYLESLPGWCVEEFLDSS
Sbjct: 181 GMSENGVSFSTSNISEYLESLPGWCVEEFLDSS 205

[Close]

BLAST of HG10000496.1 vs. ExPASy TrEMBL
Match: A0A0A0LIV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G250430 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66
Identity = 145/198 (73.23%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQST-GAAAAANS 60
           MKIRCDVC+KEEASVFCPSDEAALCA CDR +H ANKLA +H+RFSLL S+  A+AAA S
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCAPCDRQIHRANKLASQHNRFSLLHSSASASAAATS 60

Query: 61  LPLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSST 120
            PLCDICQ+RRAFLFCREDRAILCRECDIPIH TS+HTQKHSRFLLTGVKVSPSPATS  
Sbjct: 61  EPLCDICQIRRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSPATS-- 120

Query: 121 SSSSSSVSGGGEEIEGEIGLLKKWSRKRAKMGCNSKGLEELEQPLNVEENGVSFSRSSIS 180
           SS SSSV+  GEE EG    LKK SRKR+KMG  SKGL                    IS
Sbjct: 121 SSCSSSVASSGEENEGS---LKKCSRKRSKMGF-SKGL-------------------VIS 173

Query: 181 EYLESLPGWCVEEFLDSS 198
           EYLESLPGWCVEEFLDSS
Sbjct: 181 EYLESLPGWCVEEFLDSS 173

[Close]

BLAST of HG10000496.1 vs. ExPASy TrEMBL
Match: A0A5A7TQI3 (B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00410 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.8e-66
Identity = 145/197 (73.60%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC+KEEASVFCPSDEAALC ACDR VH ANKLA KH RFSLL S  A+AAA S 
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCPACDRQVHRANKLASKHSRFSLLHS-AASAAATSQ 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           PLCD+CQ++RAFLFCREDRAILCRECDIPIH TS+HTQKHSRFLLTGVKVSPS ATS  S
Sbjct: 61  PLCDVCQIQRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSTATS--S 120

Query: 121 SSSSSVSGGGEEIEGEIGLLKKWSRKRAKMGCNSKGLEELEQPLNVEENGVSFSRSSISE 180
           S SSSV  GGEE E   GLLKK SRKR+KMG  SKGL                    ISE
Sbjct: 121 SCSSSVGSGGEENE---GLLKKCSRKRSKMGF-SKGL-------------------VISE 171

Query: 181 YLESLPGWCVEEFLDSS 198
           YLESLPGWCVE+FLDSS
Sbjct: 181 YLESLPGWCVEDFLDSS 171

[Close]

BLAST of HG10000496.1 vs. ExPASy TrEMBL
Match: A0A1S3CDR2 (B-box zinc finger protein 21-like OS=Cucumis melo OX=3656 GN=LOC103499713 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.8e-66
Identity = 145/197 (73.60%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC+KEEASVFCPSDEAALC ACDR VH ANKLA KH RFSLL S  A+AAA S 
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCPACDRQVHRANKLASKHSRFSLLHS-AASAAATSQ 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           PLCD+CQ++RAFLFCREDRAILCRECDIPIH TS+HTQKHSRFLLTGVKVSPS ATS  S
Sbjct: 61  PLCDVCQIQRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSTATS--S 120

Query: 121 SSSSSVSGGGEEIEGEIGLLKKWSRKRAKMGCNSKGLEELEQPLNVEENGVSFSRSSISE 180
           S SSSV  GGEE E   GLLKK SRKR+KMG  SKGL                    ISE
Sbjct: 121 SCSSSVGSGGEENE---GLLKKCSRKRSKMGF-SKGL-------------------VISE 171

Query: 181 YLESLPGWCVEEFLDSS 198
           YLESLPGWCVE+FLDSS
Sbjct: 181 YLESLPGWCVEDFLDSS 171

[Close]

BLAST of HG10000496.1 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-46
Identity = 109/211 (51.66%), Postives = 133/211 (63.03%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI C VC+KEEASVFC +DEAALC  CDRHVH ANKLAGKH RFSL   T   A     
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDA----- 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           PLCDIC  RRA LFC+EDRAILCRECDIPIH  ++HT+KH+RFLLTGVK+S SP+    +
Sbjct: 61  PLCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRA 120

Query: 121 SSSSSVSGGG------EEIEGEI-----GLLKKWSRKRAKMGCNSKGLEELEQPLNVEEN 180
           S+S+S +  G      + +  E+       +   S       C   G+EE    ++   +
Sbjct: 121 SNSNSAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNC-YYGIEENYHHVSDSGS 180

Query: 181 GVSFSRSSISEYL-ESLPGWCVEEFLDSSMC 200
           G S    SISEYL E+LPGW VE+ L+   C
Sbjct: 181 G-SGCTGSISEYLMETLPGWRVEDLLEHPSC 204

[Close]

BLAST of HG10000496.1 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-44
Identity = 105/208 (50.48%), Postives = 136/208 (65.38%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKIRCDVC+KEEASVFC +DEA+LC  CD  VH ANKLA KH RFSLL     +++  S 
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLY---PSSSNTSS 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVS-------PS 120
           PLCDICQ ++A LFC++DRAILC++CD  IH  ++HT+KH RFLLTGVK+S       P+
Sbjct: 61  PLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPT 120

Query: 121 PATSSTSSSSSSVSGGGEEIEGEIGLLKKWSRKRAKMGCNSKGLEELEQPLNVEENGVS- 180
             +SS+SSS+   S  G  I     L K  S         S  ++   + +N  +  V+ 
Sbjct: 121 SKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPP-----QSNKIQPFSK-INGGDASVNQ 180

Query: 181 -FSRSSISEYL-ESLPGWCVEEFLDSSM 199
             S S+ISEYL ++LPGW VE+FLDSS+
Sbjct: 181 WGSTSTISEYLMDTLPGWHVEDFLDSSL 199

[Close]

BLAST of HG10000496.1 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 135.6 bits (340), Expect = 4.5e-32
Identity = 66/124 (53.23%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI+C+VCE  EA+V C +DEAALC ACD  +H ANKLAGKH R  L      +A+A+S+
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL------SASASSI 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQ    F FC +DRA+LCR+CD+ IH  + H   H RFLLTG+KV      +  S
Sbjct: 61  PKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPS 118

Query: 121 SSSS 125
           + SS
Sbjct: 121 TKSS 118

[Close]

BLAST of HG10000496.1 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 )

HSP 1 Score: 135.6 bits (340), Expect = 4.5e-32
Identity = 66/124 (53.23%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI+C+VCE  EA+V C +DEAALC ACD  +H ANKLAGKH R  L      +A+A+S+
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL------SASASSI 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           P CDICQ    F FC +DRA+LCR+CD+ IH  + H   H RFLLTG+KV      +  S
Sbjct: 61  PKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPS 118

Query: 121 SSSS 125
           + SS
Sbjct: 121 TKSS 118

[Close]

BLAST of HG10000496.1 vs. TAIR 10
Match: AT4G10240.1 (B-box zinc finger family protein )

HSP 1 Score: 129.0 bits (323), Expect = 4.2e-30
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHLANKLAGKHDRFSLLQSTGAAAAANSL 60
           MKI+C+VCEK EA V C SDEA LC  CD  VH ANKL  +H R +L +   +A  A+  
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHGTSDHTQKHSRFLLTGVKVSPSPATSSTS 120
           PLCDICQ R+ + FC EDRA+LC +CD  IH  +     H RFLL+GV+VS    T + S
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQVSDQSLTEN-S 120

Query: 121 SSSSSVSGGGEEIEGEIGLLKKWSRKRAKMG 152
             S+S S    +I+ ++ L  ++S +  + G
Sbjct: 121 ECSTSFSSETYQIQSKVSLNSQYSSEETEAG 146

The following BLAST results are available for this feature:

BLAST of HG10000496.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902472.1	3.1e-83	84.80	B-box zinc finger protein 21-like [Benincasa hispida]	[more]
KAG6571083.1	8.3e-73	72.90	B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022944246.1	2.4e-72	72.43	B-box zinc finger protein 20-like [Cucurbita moschata]	[more]
XP_023513248.1	3.2e-72	72.30	B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986607.1	3.5e-71	72.30	B-box zinc finger protein 20-like [Cucurbita maxima]	[more]

BLAST of HG10000496.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IGM7	7.6e-45	51.66	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q9LQZ7	2.5e-43	50.48	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q9SYM2	6.3e-31	53.23	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
O82617	5.9e-29	45.70	B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1	[more]
Q96288	8.5e-28	53.15	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]

BLAST of HG10000496.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTW5	1.2e-72	72.43	B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 ...	[more]
A0A6J1J816	1.7e-71	72.30	B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE...	[more]
A0A0A0LIV6	1.6e-66	73.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G250430 PE=4 SV=1	[more]
A0A5A7TQI3	2.8e-66	73.60	B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CDR2	2.8e-66	73.60	B-box zinc finger protein 21-like OS=Cucumis melo OX=3656 GN=LOC103499713 PE=4 S...	[more]

BLAST of HG10000496.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39070.1	5.4e-46	51.66	B-box zinc finger family protein	[more]
AT1G75540.1	1.7e-44	50.48	salt tolerance homolog2	[more]
AT1G78600.1	4.5e-32	53.23	light-regulated zinc finger protein 1	[more]
AT1G78600.2	4.5e-32	53.23	light-regulated zinc finger protein 1	[more]
AT4G10240.1	4.2e-30	45.70	B-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 1.5E-9 score: 47.8 coord: 58..105 e-value: 2.3E-11 score: 53.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 60..97 e-value: 3.6E-6 score: 27.0 coord: 3..43 e-value: 4.8E-6 score: 26.6
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.736526
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 58..105 score: 9.925735
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..105 e-value: 1.2E-9 score: 40.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..131
None	No IPR available	PANTHER	PTHR31832:SF18	B-BOX ZINC FINGER PROTEIN 21	coord: 1..197
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..197
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 2.98813E-14 score: 62.3151
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 62..105 e-value: 5.11314E-12 score: 56.5371

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10000496	HG10000496	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10000496.1-cds	HG10000496.1-cds-Chr09:5882797..5883399	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10000496.1	HG10000496.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding