HG10000119.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAATGTCTCTCGATTGGAGGTCTTTACGAGAAGCCTGTCGGGACATGGAACTGCCTACGCTGTCGCCGTCCCACCGCCGAAGGATGCAAAGATATCATCACCGAAATACTTGATGAGAATCTTTGTCCTCTTCCACCCACGCCACCAATGGCTTGAAAATCCAAAGAATTCAGAGAAAATATCGTTTGCGTTTCGGGGATTGAACCGAAACGTCGTTGGTCCATCTCCGGTGGAGAAGAAGGTGGCTCCGCTTGGACCTCCGGCATCCGGAGGTGGCACCTGA ATGGTAAATGTCTCTCGATTGGAGGTCTTTACGAGAAGCCTGTCGGGACATGGAACTGCCTACGCTGTCGCCGTCCCACCGCCGAAGGATGCAAAGATATCATCACCGAAATACTTGATGAGAATCTTTGTCCTCTTCCACCCACGCCACCAATGGCTTGAAAATCCAAAGAATTCAGAGAAAATATCGTTTGCGTTTCGGGGATTGAACCGAAACGTCGTTGGTCCATCTCCGGTGGAGAAGAAGGTGGCTCCGCTTGGACCTCCGGCATCCGGAGGTGGCACCTGA ATGGTAAATGTCTCTCGATTGGAGGTCTTTACGAGAAGCCTGTCGGGACATGGAACTGCCTACGCTGTCGCCGTCCCACCGCCGAAGGATGCAAAGATATCATCACCGAAATACTTGATGAGAATCTTTGTCCTCTTCCACCCACGCCACCAATGGCTTGAAAATCCAAAGAATTCAGAGAAAATATCGTTTGCGTTTCGGGGATTGAACCGAAACGTCGTTGGTCCATCTCCGGTGGAGAAGAAGGTGGCTCCGCTTGGACCTCCGGCATCCGGAGGTGGCACCTGA MVNVSRLEVFTRSLSGHGTAYAVAVPPPKDAKISSPKYLMRIFVLFHPRHQWLENPKNSEKISFAFRGLNRNVVGPSPVEKKVAPLGPPASGGGT Homology
BLAST of HG10000119.1 vs. NCBI nr
Match: KAF2305159.1 (hypothetical protein GH714_002671 [Hevea brasiliensis]) HSP 1 Score: 72.4 bits (176), Expect = 2.4e-09 Identity = 43/80 (53.75%), Postives = 47/80 (58.75%), Query Frame = 0
BLAST of HG10000119.1 vs. NCBI nr
Match: KAF2297760.1 (hypothetical protein GH714_002605 [Hevea brasiliensis]) HSP 1 Score: 71.6 bits (174), Expect = 4.0e-09 Identity = 45/86 (52.33%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of HG10000119.1 vs. ExPASy TrEMBL
Match: A0A6A6LZN2 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_002671 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09 Identity = 43/80 (53.75%), Postives = 47/80 (58.75%), Query Frame = 0
BLAST of HG10000119.1 vs. ExPASy TrEMBL
Match: A0A6A6L8J5 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_002605 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.0e-09 Identity = 45/86 (52.33%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of HG10000119.1 vs. ExPASy TrEMBL
Match: A0A0A9CPK0 (DnaJ subfamily B member 5 OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.6e-06 Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of HG10000119.1 vs. ExPASy TrEMBL
Match: A0A0A9K7J3 (DnaJ subfamily B member 5 OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05 Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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