Cucsat.G9647.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9647.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	zinc finger CCCH domain-containing protein 15-like
Location	ctg1673: 4088279 .. 4089923 (-)
RNA-Seq Expression	Cucsat.G9647.T4
Synteny	Cucsat.G9647.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTTTTTATTTTTATTAAATAAAATGAAACCAAACCGAACCGAGTTGGCTCGATTTGTACCCAACGTAGAAGGGGCAATACATGTAAAAAGCGAAGGAGAGCTTGGAGTTTTTAAGTACAGCAAATGTTTCTGTTAGAATATCAGTTTTCTCCAAAACCGCTTCAATTTATTAATTAATTATTATTATTATTGTTTCTAATTTTCTAATTATTTTGTTTTATTTTTTTCTCTATGGTTTTAGCTCTGTTTTCCCTCCATTTCCGATTCCCCCAAATCTTCCTCCTATAAATCCATTTCATCTTCTCCATTCCTCAACTCTCTCTTTTTCTTTCTTTCTTTCTCTCTCTGCGTATTCTTTGCCGATTCAGGTCAGTTCTTCATTCATCTTTCTGTTTATTATCGCATTAATGGATGATACTTTTTTCTATGTTTAATTAATTAATCACAACTTTCATTATTTAGTATTCAACTTCTTTGATCATCTATTCGTGATGCTTTCGTTTCGATTGAGTTATAGGTTACTGTTTATTGTGGAAAATTCTTGATCGATCATTTATCTTATTAATCAGTTTCTTGAATGCTTGCTTTGGATTTTTTTTTTTTTTTAGTTTCGGTTTCTCTCTGTTTCGTTTTTCTTGTTTTTGTGGAACTGATGTACGGGAATCGAGAACTTTCTGTTGATCGTATGTTTATTGAATTTTGAGATCGTAAAGAAAATGATCTCTGAATCTTTCTTTTTGAATGTTTGAGTTCGGATCATCGAAATGAGTTAATGTTTGAATTTGGTGTTGTTTTGTTTACTGTTATGGAAGAAATTGTGCGGATGTGGTTTATGAGTAGTTTGATTAATCTGTACTGTAATTTGTAGTTGAAATGCATAAAAGCACCACTTCTGCGTCGAATACTATTGCTGCTGCGACTACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTCTCTCTTCCAGTGACCCTCTATGGTGAGTCGACTCACGCGGATTCATCAATCTCGGCTTCCAAATCGATAAACAATCATTTCTATCAAACGCGTGTCGTACAAGATCACCAGGAAATGGTTAATCGCCATAGCCTCTGTCTCACTCAGCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGACAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTAAGCAAACACCTCAGCCTTCTGATCCAGGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGCGGAAGGATTCCGCGGACTCAGTCTAGCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGTGGAAGGGTAGAGGGAGTTGAGGTGGAGAGATTTTCGCTCCCGAAGAGCATCTCCGTGAGGTCCAATGGATACTTGAAAATGGCACAAACCGGAACCAGCCAGGGCGGAAAGATCCGCGCCTCATCTCGCCCCAGAACTGCAAGTCCTGTCAAAGTTACGGTAATGACACGTAATTTATTTGACATGATTGCCCTTTTCATTCAACTAATCACGT

Coding sequence (CDS)

ATGCATAAAAGCACCACTTCTGCGTCGAATACTATTGCTGCTGCGACTACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTCTCTCTTCCAGTGACCCTCTATGGTGAGTCGACTCACGCGGATTCATCAATCTCGGCTTCCAAATCGATAAACAATCATTTCTATCAAACGCGTGTCGTACAAGATCACCAGGAAATGGTTAATCGCCATAGCCTCTGTCTCACTCAGCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGACAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTAAGCAAACACCTCAGCCTTCTGATCCAGGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGCGGAAGGATTCCGCGGACTCAGTCTAGCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGTGGAAGGGTAGAGGGAGTTGAGGTGGAGAGATTTTCGCTCCCGAAGAGCATCTCCGTGAGGTCCAATGGATACTTGAAAATGGCACAAACCGGAACCAGCCAGGGCGGAAAGATCCGCGCCTCATCTCGCCCCAGAACTGCAAGTCCTGTCAAAGTTACGGTAATGACACGTAATTTATTTGACATGATTGCCCTTTTCATTCAACTAATCACG

Protein sequence

MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGESTHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTVMTRNLFDMIALFIQLIT

Homology

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BLAST of Cucsat.G9647.T4 vs. ExPASy Swiss-Prot
Match: Q9C9F5 (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68200 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.3e-20
Identity = 77/197 (39.09%), Postives = 109/197 (55.33%), Query Frame = 0


Query: 54  PVTLYGESTHADSS---ISASKSINNHFYQTR-VVQDHQEMVNRHSLCLTQLREATEEAD 113
           P +  G S    SS   +S+S   +  +  TR ++Q  Q+MVNR +LC T+L EA+ EA+
Sbjct: 7   PFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAE 66

Query: 114 ALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPF----NFAEGFRGLSLAEKG 173
           ALR EN  LRS+N  L   L+ LI++S+Q ++   D   P     N + G       E  
Sbjct: 67  ALRLENTELRSMNLRLKNELNSLIRSSIQNRF---DHRSPLRMLSNLSIGGNDADEVENQ 126

Query: 174 ASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTG---TSQGGK 233
             +   +D++D+SPTSVM     E  ++ R SLPKSISVRSNGY K +Q G    +Q GK
Sbjct: 127 NRTVNRDDVNDKSPTSVM-----ENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGK 186

Query: 234 IRAS-SRPRTASPVKVT 239
            R + ++P T   V  T
Sbjct: 187 PRGTVTKPGTCGQVSTT 195

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BLAST of Cucsat.G9647.T4 vs. ExPASy Swiss-Prot
Match: A2ZVY5 (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0645000 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 60/200 (30.00%), Postives = 87/200 (43.50%), Query Frame = 0


Query: 40  SPIFAPKQSVPVSLPVTLYGEST-----HADSSISASKSINNHFYQTRVVQDHQEMVNRH 99
           SP F      P++  V+L   S+       D   +A+ +        R+   +QE+ +R+
Sbjct: 47  SPSFGFSSPSPLATSVSLSPSSSASLVDDGDDGGAAADATGQRLQLARLALQYQEVADRY 106

Query: 100 SLCLTQLREATEEADALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPFNFAE 159
            LCL+ L EA EEA ALR EN  LR  N +L+  L+LL          S         A+
Sbjct: 107 ELCLSHLAEAAEEAAALRLENAELRVTNSDLALRLALL----------SGKHTAAVAVAD 166

Query: 160 GFRGLSLAEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ 219
             R L L E+  +++  E   ++                    LPKSISVRS  YLK+ Q
Sbjct: 167 EIRRLRLGEQKVAAATKERTPEKLAV-----------------LPKSISVRSTSYLKLNQ 219

Query: 220 TGTSQGGKIRASSR-PRTAS 234
              +      A +R PRT+S
Sbjct: 227 QSQAATATSAAPNRKPRTSS 219

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BLAST of Cucsat.G9647.T4 vs. ExPASy Swiss-Prot
Match: Q6L5G1 (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07
Identity = 51/157 (32.48%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 70  ASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRSINHELSKHL 129
           A+ +  +  +   +   +QEM NR  LCL+ L +A +EA ALRQEN  LR  N++L+  +
Sbjct: 86  AAAATEHRLHLAHLALQYQEMANRFELCLSHLADAADEAAALRQENAELRVANNDLACRI 145

Query: 130 SLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPTSVMEGGRVE 189
           +         ++G   Q+     A   R L L  K  +  A        P ++M      
Sbjct: 146 A---------KFGGR-QSSAIALAGDLRRLRL-PKEQTVPALPPPPQSPPAALM---NPV 205

Query: 190 GVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRAS 227
            V  ++  LPKSIS+RS GY K+     +QGGK R S
Sbjct: 206 AVPEKQAVLPKSISIRSTGYQKL-----NQGGKHRVS 223

[Close]

BLAST of Cucsat.G9647.T4 vs. ExPASy Swiss-Prot
Match: Q9C9N3 (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=At1g66810 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.6e-05
Identity = 67/223 (30.04%), Postives = 93/223 (41.70%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSS----SQLKSQLQTND-------VYASLYNSPIFAPKQSV 60
           M K   S    +A  T ++SS    S +  Q   N         +ASLYNS IF+P+   
Sbjct: 1   MEKLAASTVTDLACVTAINSSPPPLSPISEQSFNNKHQEEFAASFASLYNS-IFSPESLS 60

Query: 61  PVSLPVTLYGESTHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEAD 120
           P   P +     +  D+      +  +   Q +++ ++ E+   + LCL +L+    E D
Sbjct: 61  P--SPPSSSSPPSRVDT------TTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELD 120

Query: 121 ALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSS 180
           +LR EN  LR  N +L K    LI+ S       S  AP  N    FR            
Sbjct: 121 SLRHENDSLRFENSDLLK----LIRISTSSSSSVSPPAPIHN--RQFR------------ 180

Query: 181 AWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKM 213
               ISD            +    ER SLPKSISVRS GYLK+
Sbjct: 181 --HQISDSR--------SAKRNNQERNSLPKSISVRSQGYLKI 186

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BLAST of Cucsat.G9647.T4 vs. NCBI nr
Match: XP_011655475.1 (zinc finger CCCH domain-containing protein 15 isoform X2 [Cucumis sativus] >KGN52127.2 hypothetical protein Csa_009299 [Cucumis sativus])

HSP 1 Score: 451 bits (1161), Expect = 1.45e-157
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. NCBI nr
Match: XP_004151447.1 (zinc finger CCCH domain-containing protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 451 bits (1161), Expect = 1.50e-157
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. NCBI nr
Match: XP_008467172.1 (PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X2 [Cucumis melo])

HSP 1 Score: 444 bits (1142), Expect = 1.13e-154
Identity = 233/238 (97.90%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. NCBI nr
Match: XP_008467171.1 (PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo])

HSP 1 Score: 444 bits (1142), Expect = 1.17e-154
Identity = 233/238 (97.90%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. NCBI nr
Match: KAA0046296.1 (zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var. makuwa] >TYK30461.1 zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 442 bits (1138), Expect = 4.75e-154
Identity = 232/238 (97.48%), Postives = 234/238 (98.32%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTND YASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDAYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. ExPASy TrEMBL
Match: A0A0A0KPN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576700 PE=4 SV=1)

HSP 1 Score: 451 bits (1161), Expect = 7.27e-158
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. ExPASy TrEMBL
Match: A0A1S3CT37 (zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504589 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 5.46e-155
Identity = 233/238 (97.90%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. ExPASy TrEMBL
Match: A0A1S3CSW3 (zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504589 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 5.66e-155
Identity = 233/238 (97.90%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. ExPASy TrEMBL
Match: A0A5D3E4G4 (Zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00010 PE=4 SV=1)

HSP 1 Score: 442 bits (1138), Expect = 2.30e-154
Identity = 232/238 (97.48%), Postives = 234/238 (98.32%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTND YASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDAYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238

[Close]

BLAST of Cucsat.G9647.T4 vs. ExPASy TrEMBL
Match: A0A6J1FFE7 (zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444951 PE=4 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 1.47e-142
Identity = 219/238 (92.02%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAA TTMSSSSQLKSQLQTN+VYASLYNS IFAPKQSVPVSLP TLYG+
Sbjct: 1   MHKSTTSASNTIAAGTTMSSSSQLKSQLQTNNVYASLYNSSIFAPKQSVPVSLPSTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STH DS ISASKSINNH YQT VVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHTDS-ISASKSINNHLYQTCVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLI ASVQKQYGSSDQ PPFNF EGFRGLS+AEKGASSS WEDISDESPT
Sbjct: 121 INHELSKHLSLLIHASVQKQYGSSDQTPPFNFVEGFRGLSVAEKGASSSTWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT 238
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ G+SQGGK+R SSRPRTASPVKVT
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQGGSSQGGKVRVSSRPRTASPVKVT 237

The following BLAST results are available for this feature:

BLAST of Cucsat.G9647.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9F5	8.3e-20	39.09	Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A2ZVY5	1.9e-08	30.00	Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L5G1	2.8e-07	32.48	Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX...	[more]
Q9C9N3	7.6e-05	30.04	Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cucsat.G9647.T4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655475.1	1.45e-157	100.00	zinc finger CCCH domain-containing protein 15 isoform X2 [Cucumis sativus] >KGN5...	[more]
XP_004151447.1	1.50e-157	100.00	zinc finger CCCH domain-containing protein 15 isoform X1 [Cucumis sativus]	[more]
XP_008467172.1	1.13e-154	97.90	PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X2 [Cucumi...	[more]
XP_008467171.1	1.17e-154	97.90	PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumi...	[more]
KAA0046296.1	4.75e-154	97.48	zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var....	[more]

BLAST of Cucsat.G9647.T4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPN3	7.27e-158	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576700 PE=4 SV=1	[more]
A0A1S3CT37	5.46e-155	97.90	zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3CSW3	5.66e-155	97.90	zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo OX...	[more]
A0A5D3E4G4	2.30e-154	97.48	Zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo va...	[more]
A0A6J1FFE7	1.47e-142	92.02	zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucurbita mosch...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..121
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 56..240
None	No IPR available	PANTHER	PTHR12547:SF141	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15	coord: 56..240

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9647	Cucsat.G9647	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9647.T4.E1	Cucsat.G9647.T4.E1	exon
Cucsat.G9647.T4.E2	Cucsat.G9647.T4.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9647.T4.C1	Cucsat.G9647.T4.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9647.T4	Cucsat.G9647.T4-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding