Cucsat.G8736.T13 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G8736.T13
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionR3H domain containing protein
Locationctg1558: 1804339 .. 1810546 (+)
RNA-Seq ExpressionCucsat.G8736.T13
SyntenyCucsat.G8736.T13
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAATTTATATATTAAAAAGTGAAATAGAAATCACATTTTATCGTTTGTTGGACGCCAGACTCGTCAGATAACCGTAGAGTTTGGGATTCCTTCGAAAATCGAAACCCCTGCTCAAATTCCTTCCTTCTTCCAGTCTTCAACCTTCATACTTCACAATGACTGTCGCCCAATTCGCTATGGTAACTTCTTCTCCATCTTTCTTTCTTTCTTTTCTTTCTTCTTCTTCTTCTTCTTCTTCACTCTTATCTTCTGATTTCACAGAGTCGCTTAATTTTGCTGCAAATTGTAGTAATGTTCTCTTAGTTTAGTTTTCCGATTTTTTCATGGGCTCTAGCATATTTTATATTTTGATTAGTTGACTGTGAAGAACTTGGTAGTTTCTGGATCAGGGTATTAGGTAGTTCGGATTTTTAATTTAATTGATTTTTTTTTTGGCTCCTGGGTTTCGTTTTATATGTGCCAATTTTTTTTTAAGCTTCGGTGATTTGAGATTGTTATATATTTTTAATTTATTTTTCCTTTTTTGATTGGATTTTGGTATGAAAGACCGAATGTTGTTCTGCAAATGGAAGTAATTCATACACTGAATTTCAAGAAAATGTGATGCAGTAGGTTTTCCTTATTTCTTGATATCAAATATTGGAAATCCTTTCTGGAAAAAAAAAGTGTTCTTTGGGTTTTAACGTTTGTATTGCCTCTGACTAGTATCTTGATTCATCTAGGTTAAAAAAACACTCTTGGTTCCTAAACTTGAAGTAAAATAACAACTTAATCTTGAACTTTGGTTTGTGACAATTTAGTCTTTGTAGCTTCAATTTTGTAATGATTTAGTCATTGAACTTTAGTATGTAACAATTTTGTCCCTTTGGTAAAAGAATTCATAAAATTAGATGTTAATTTTTATTAGTTTATCATGTAGTCTTTGTAATTTATAAAAATATTGAGTCCCTTATTAGTTTATTGGTTTATTTATGCAATAAACCTCTTTAGATCTTAACACTAGTTTCTACAATAGGAGCTAAATCATTACAAAATTTAAAGTGCAAGAACTAAGTTGGTACACAGTAAAATTTAGGGACTAAATTTTTACAAAACTGGAAGTACGTGGACTAAATGTTGCAAACCAAAGTTCAAGGACGAAATCCTTATTTCTATGAAAGTTTAGGGACTAAAGGGGACTTTTAACAATTCATCTAAATGGATTTTAGGTTTTCATTTAGCAAAGAAAAGAGGAGATTTGTAGTATTATGCACCAGAAGTTCTGGGCAAGTTAATTAATGAAAGAAAATGTTATAGAAATGAAGATATCTTCTGCCATTTTCAGTGGCCAGTGTTTAAAAGCCTTCCCGACTCCGGACCTAGCGCTTGGCATGCAAACAAGGGATGCATTAGGTGTGCATGCCTTTTGTGAAGTCCCATAGCCCAAAGCACTGGCCCTTGGGCCTTTTTTAATTATTTTTAAAGAATAGTAGTTGTTAGGTTTTTTTGTCTGTAGTAACTAAAAAAAATAAGCTTTACTAAGACTAAATTCCAAACTTTTTGTGCTCAGGGTTCCTTTTCCCATTCCCAATTCAATTATACCTTCTAGTCTTATTTAGTAGTTTTATGTATGATATGTGTCTCTCCTATATGTACCACGTTTTTGTTGCGAATTGCATTTAAGTCTCAAAAGACTATTGCGCTTTATTAGCTTTAAAAAAGAGTTTGACTTTCTATCTTCAAACTTGCATTAGTGTACACACATTCTAATCTTCAAAAACAGCTTTTCTCTCTCTCTTTTTCCCCCTTTATGCTAGGACAAGGTAGATTCTTGTGTGTTTGAACGGAGTTGTTTACTAAAATATAAATATTCTAGAACCTTAAGTAGATATCTAATTGTTAGTACTTGCTATTACATAATCCTACATTGTACTCTTTTCGTTAACTTTTTCCATTTTTTTTTTCCGTTATGGCTGATATCTGACTCTCCAGGTGGAGGAGTTGGCCTTTCTTGTTAAGGACAACCTCCCCAGCAAGCATCTTATTCTATCAATGGAAGAAACCTTCATCAACTTTCTTCACGATGAAACCAGGTAATTGTTGGATGATGGTTAGATGATGTTAGTTATTGAATTTTAAAATATTTTCGTATTTCATTCCGCCAATGGTGATGGGACAAGTGGAAGATTATGCGCTCAAACAACAGTAGCTATGTATCTAGATTGGATCCTGTTAGATACTAGATATTTAGTTTGTGTTGGTTAAGGGGCATAAGGGGTTATGGGGGAACAAACAAAATGGCTGTTGGAAGAAAAAAAAAATGAAGAACCTTCCAATGAACATACAACGACACAAACTAAAGAAAAGCTTTAGATTCAAATTCAAACAAATGGGGTAGTTTGGTTGCTTATTGGGCTGGATCTCCAATTCATTTGCAGGCTGAAGAGAAGGTTGTTGGTTATGTGTTTTGATTATGCTAAAAAAAATGGAAGAGGAAGAAGAAGAAGAAAAAGTTTCCCGATTTTGTGATCATGAATGTAAGCTCACCTTGAGGGCAAGGTGTCTTTGACGGGCGGACTAATGTTAGGTACTAGATATGTAGTTTGTGTTGGTTAAGGTGTACAAGGGTAATTAGATAGATACGGAGTTACTAGTAGTTATTGTATGAGGGTAGTTACTAGAGTGGTTACTACTTATTATAAATAGGAGGGTAAGTGGGTGAGGAATTGGTTATTCTGTTGAGTGATCTAGGGCTTGAGTGAGAATACTCAAGAGGGAGGTTCTAAGTGCGTTATACTTGGGTTTTTCTTGTATTTCTTTATAGTGATATTTCATTATATACAAATCGTGTTCTTGTTAGGAAGTATCCTAATAGATCCCGCCCCCCATAAGAAACAATTACTTTGTGGGTAATATCCTAATGGGCTGCCCTTGCCATTTTTCTATGAACACTTTGGAGCAGAAAGGTCAATTTTTGTTATCTCTCAATAGTTGTTTGGCTAGCTAATCTAGAAGATAGTAACCAGTATTTCTTCGTTTGGTTCTTAACTCACATTATGGTTCTTGCCCATTGGAGAATATCTTGAGGTTTACATTGTTCTTTACCCATGGCTTTTATGGTGACCGCTAACTTTTTAGAATTTATTTGAATAGCAGTTCAGATGGAATCTTGGAGTTGAAACCAATGGATTCATACAACCGTCTTCTTTTGCATCGCCTTGCTGATATTTTTGGGTACATTTTTTCCCTTCCATGCATATTATTTGTCTAGTTCGTTGTGAGGTTGAATTTTTTATTTTCTTGTTACTCATGTCAGCCTCTCTAACTTTGTACTTCTCCCCATTCCTCTGTCAGACTTGGCCATGTATCAGTTGGTGAAGGTGATAATAGACACTTGGTTTTGGAGCGATACCCAGAGTCATCAATGTATGTGAACAATTCTAGATCTGACTTCTTTTTGTTCAATATCTTCATAACGTAAATTGTTATTGATAAAACATTTTATCTGGTCATCTATAGCAATTATACATTGAAAGAATTGAATAAGCCTCTTCCTTATTCTTCTTTCCTAGAAGTCTTCTCCACAGAAAGATCAAAGAAGTTCTACTTTAGTTTGGAGTTAAGGCATTTGAGATTTGTTATTATGAATATTCAAGTACAGACAGTATACCACCCTCTCTCTCCCCTGCTTTTGTATTCCAAGTTCTCAGCCGCTGCTCTCATTCCAAATTCTGCTTGTTTTCATTATTGGAAAAGGAGACTTCCTCACGTCCACTCAGGGAAAGAGTTGGACTACACAGCAATGCCATTGGCTATATGAAAAGATGGACTTCTTGTAGTTCTCATCAAACAAGTTTTATTTGTGACAGAAGTCCTTTATTTCTTCATCATATTCATACTTCATTTATTTCTTAGTTATGAATATATTTTGGGATCCAATCTTTCTTTCATCTTTCAAATAAGAAACCAAATTTTATGATATAGCTTAAAGTGAAACTAGGCTTCTTATATTTACAAACTGTGGTACCATAGGGACATGGTAGGACGGGTGATACACTGATACTAATAAAGCTCATTTGTTCATAAACTTTTTGTCTATTGCAGACCGTCCATTCTTGTGAGTGATATTCTGTGGGAGTATGATGAACCTCAAATGTCAACGATACCACACCAACTATTAAGGAGAAAGGAAAATTCTTCTGGTATACTTATTATTTTGTGACGGCATAAGCAGTACCTGCAATTGTTTCAGTTCATGCTATTTAGTATCAATTACAATTTGATCATCAGAAAGTTTTCGTGTGCATTTATTGTTAGAATTAGTGGGCTTTGCTCAAGGAAGGATTTATTCTATTATCCTTTTCTTTTTTATCATAAGTTGTAACCTATTTATCTTCCCTCTTAAATCTTTTGTTAATATGAGAAATTAATAAGACAGTCAATTGTGGTTTTTCTCCCAGCACTCAGGTTTCCATGTAATTTGGTGTCTACTTTACTTTACCGCTTTTAACATTTATAATGGACTTAAGGTCATTTGAAGGCTGCAGAGGAGATGGTATGATGAACATGGAATATTTATTTGTGAAAATTCCCTACTGTGCTCTCTCTCTCTCTCTTCACTTTAAATAGCATTAGAAGGAATGCCACGGTATGAATAGAGTAGAATAAAAGGTCTTCTGACTTCCGAGTAGGATTTGATAGGGATTCTGGATCTGAAGTTTGAAGTTTAGGGTGAACACGACCTCTTTAATTGAACGAACGAGTATGTATGCAAATATCTCATTTTAGGGTAGAAAATAAAATGAAAAATGTTGTTCAAGTTTGCACATTTAACAAAGTTTGTTTAATGTCAGTTCATCATATTGGAAGTTCTCATTTATTATGTTGAATGCCTATTTATTTTACTTGCAGATTTACTTTCAAAAAATTACAAGAAACTGAGTTGCCTATACTTGATGTTGTGTTTCAGCGAGTTCAACAAAATCATCTCCTCAACGTTCGCTTGAAGAGAGAGAAGCAGCTTATCTGGCTGTCCGTGAGCGAATTTTCATGACGCACGTTGGAGAGGATAACGAGCCCCTGAAACCAAAGCCACGATGTGATCCTGCAGTTGCACGACGCATGATTGCTCATGCACTGGGACAGCGAGTTAATTCATTATCAGAGGATACTAATTGCCATCAGAAAGAGCAAGGAGGTGTCACGAACAATGCATACATCCAAGCAAGAGATTCAAAGTTGCCTGATTCTACTGTGGAAGCCATTAACAAAACCATTTCACGGTCGGATCAATGTGTGAACTTGAAGAATGAATTGGATAAGAATTGTAATCCAGACGTGTCATTGGCAAGGGGAAGTACTGCTGCCAAAATGAAACCTGCCAAGAGTTATCCAAAGGCAAGTCATGTCGACAATGAGCACTTGAAGAGAGAACATTTAGGAGCTGCAAAGAGGATGTTTTCTCAGGCTTTAGGCAAGCACTGCCGAAGGAATGAATCTCTTCAAACTCGTGGGGAAGCAGATTAAAATGGAAACAAGATTCAAATACATCTGCAGTAGCTATTGTTTTCTGGCATGATCTTTTGTCCTATTCACAATTTTTTGAGTTGTCAGGATTCCTGGTGCTAACAAAAAGATGAATGGGACTGTGTGATGACAAATTTGTCTATGTCGCATGGCCAATGGTCGTCAATGGTGTCATTGGCGAAATGATCAGGGTTGGATGCAATGCCTATGGCTGCTTTCATGTTGCCAATTCAGTTAGCAAATATGAAATCTGACCTTGCGTTCTCTAGCTTATTTATTCTGGGAATTCAATCTGGTCGTTTAAGCAGCACTGTGTGAGGAGATTGAACTATAGGTTCGAGTGGAGTTGTGTGTAAAGGTTGTGGAAATCAATTGGGATCGAATCTGTTCACTGATTGAGAGCACATAGCGGGTTGTGTCGGGTTAACATAGAGGTTTCTAACTTAAATCTGTGTTGGTACTTGACTGTTTATAGCCTCTCTCTATCTTTGCTGATGGCACAAATAGCGTCTCTTGGATTGTCATGGTTATGTACCTGACTCGACGATATCGGGCAATGCACTTTGTTTTATGTGAAATTGTAGTGGTTGAATTTTAAGCTTTATTGTTCCCTTTGAAATCTAGAGGTATTGATACTTTCTTTTGAATGAAAATCGAAATGTACATGGATTTCAAGTATCTTTGATTTTTTGTCTAATGG

Coding sequence (CDS)

ATGACGCACGTTGGAGAGGATAACGAGCCCCTGAAACCAAAGCCACGATGTGATCCTGCAGTTGCACGACGCATGATTGCTCATGCACTGGGACAGCGAGTTAATTCATTATCAGAGGATACTAATTGCCATCAGAAAGAGCAAGGAGGTGTCACGAACAATGCATACATCCAAGCAAGAGATTCAAAGTTGCCTGATTCTACTGTGGAAGCCATTAACAAAACCATTTCACGGTCGGATCAATGTGTGAACTTGAAGAATGAATTGGATAAGAATTGTAATCCAGACGTGTCATTGGCAAGGGGAAGTACTGCTGCCAAAATGAAACCTGCCAAGAGTTATCCAAAGGCAAGTCATGTCGACAATGAGCACTTGAAGAGAGAACATTTAGGAGCTGCAAAGAGGATGTTTTCTCAGGCTTTAGGCAAGCACTGCCGAAGGAATGAATCTCTTCAAACTCGTGGGGAAGCAGATTAA

Protein sequence

MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTRGEAD
Homology
[Close]
BLAST of Cucsat.G8736.T13 vs. NCBI nr
Match: XP_004152835.1 (R3H domain-containing protein 1 isoform X2 [Cucumis sativus] >KGN61245.1 hypothetical protein Csa_006627 [Cucumis sativus])

HSP 1 Score: 319 bits (818), Expect = 1.01e-107
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR
Sbjct: 152 MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 211

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV 120
           DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV
Sbjct: 212 DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV 271

Query: 121 DNEHLKREHLGAAKRMFSQALGKHCRRNESLQTRGEAD 158
           DNEHLKREHLGAAKRMFSQALGKHCR+NESLQTRGEAD
Sbjct: 272 DNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRGEAD 309

[Close]
BLAST of Cucsat.G8736.T13 vs. NCBI nr
Match: XP_011648991.1 (R3H domain-containing protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 319 bits (818), Expect = 1.05e-107
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR
Sbjct: 153 MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 212

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV 120
           DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV
Sbjct: 213 DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV 272

Query: 121 DNEHLKREHLGAAKRMFSQALGKHCRRNESLQTRGEAD 158
           DNEHLKREHLGAAKRMFSQALGKHCR+NESLQTRGEAD
Sbjct: 273 DNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRGEAD 310

[Close]
BLAST of Cucsat.G8736.T13 vs. NCBI nr
Match: XP_008441899.1 (PREDICTED: uncharacterized protein LOC103485903 isoform X2 [Cucumis melo])

HSP 1 Score: 275 bits (702), Expect = 4.42e-90
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTH+GEDNEPLKPKPRCDPAVARRMIAHALGQRVNS  EDTNCH+K QG V NNAYIQAR
Sbjct: 152 MTHIGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSFPEDTNCHRKVQG-VANNAYIQAR 211

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASH- 120
           DSKLP+STVEAINKTIS+SDQC+NLKNE DKNCNP+VSLARGSTAAKMK  KS PKASH 
Sbjct: 212 DSKLPNSTVEAINKTISQSDQCMNLKNESDKNCNPNVSLARGSTAAKMKLDKSSPKASHD 271

Query: 121 VDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTR-GEAD 158
           VDNEHLKREHLGAAKRMFSQALGKHCR+NESLQTR GEAD
Sbjct: 272 VDNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRCGEAD 310

[Close]
BLAST of Cucsat.G8736.T13 vs. NCBI nr
Match: XP_008441898.1 (PREDICTED: uncharacterized protein LOC103485903 isoform X1 [Cucumis melo])

HSP 1 Score: 275 bits (702), Expect = 4.57e-90
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTH+GEDNEPLKPKPRCDPAVARRMIAHALGQRVNS  EDTNCH+K QG V NNAYIQAR
Sbjct: 153 MTHIGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSFPEDTNCHRKVQG-VANNAYIQAR 212

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASH- 120
           DSKLP+STVEAINKTIS+SDQC+NLKNE DKNCNP+VSLARGSTAAKMK  KS PKASH 
Sbjct: 213 DSKLPNSTVEAINKTISQSDQCMNLKNESDKNCNPNVSLARGSTAAKMKLDKSSPKASHD 272

Query: 121 VDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTR-GEAD 158
           VDNEHLKREHLGAAKRMFSQALGKHCR+NESLQTR GEAD
Sbjct: 273 VDNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRCGEAD 311

[Close]
BLAST of Cucsat.G8736.T13 vs. NCBI nr
Match: KAA0047706.1 (R3H domain-containing protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 275 bits (702), Expect = 1.22e-89
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTH+GEDNEPLKPKPRCDPAVARRMIAHALGQRVNS  EDTNCH+K QG V NNAYIQAR
Sbjct: 184 MTHIGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSFPEDTNCHRKVQG-VANNAYIQAR 243

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASH- 120
           DSKLP+STVEAINKTIS+SDQC+NLKNE DKNCNP+VSLARGSTAAKMK  KS PKASH 
Sbjct: 244 DSKLPNSTVEAINKTISQSDQCMNLKNESDKNCNPNVSLARGSTAAKMKLDKSSPKASHD 303

Query: 121 VDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTR-GEAD 158
           VDNEHLKREHLGAAKRMFSQALGKHCR+NESLQTR GEAD
Sbjct: 304 VDNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRCGEAD 342

[Close]
BLAST of Cucsat.G8736.T13 vs. ExPASy TrEMBL
Match: A0A0A0LH15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074070 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 4.91e-108
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR
Sbjct: 152 MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 211

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV 120
           DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV
Sbjct: 212 DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHV 271

Query: 121 DNEHLKREHLGAAKRMFSQALGKHCRRNESLQTRGEAD 158
           DNEHLKREHLGAAKRMFSQALGKHCR+NESLQTRGEAD
Sbjct: 272 DNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRGEAD 309

[Close]
BLAST of Cucsat.G8736.T13 vs. ExPASy TrEMBL
Match: A0A1S3B4H8 (uncharacterized protein LOC103485903 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485903 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 2.14e-90
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTH+GEDNEPLKPKPRCDPAVARRMIAHALGQRVNS  EDTNCH+K QG V NNAYIQAR
Sbjct: 152 MTHIGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSFPEDTNCHRKVQG-VANNAYIQAR 211

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASH- 120
           DSKLP+STVEAINKTIS+SDQC+NLKNE DKNCNP+VSLARGSTAAKMK  KS PKASH 
Sbjct: 212 DSKLPNSTVEAINKTISQSDQCMNLKNESDKNCNPNVSLARGSTAAKMKLDKSSPKASHD 271

Query: 121 VDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTR-GEAD 158
           VDNEHLKREHLGAAKRMFSQALGKHCR+NESLQTR GEAD
Sbjct: 272 VDNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRCGEAD 310

[Close]
BLAST of Cucsat.G8736.T13 vs. ExPASy TrEMBL
Match: A0A1S3B4G2 (uncharacterized protein LOC103485903 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485903 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 2.21e-90
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTH+GEDNEPLKPKPRCDPAVARRMIAHALGQRVNS  EDTNCH+K QG V NNAYIQAR
Sbjct: 153 MTHIGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSFPEDTNCHRKVQG-VANNAYIQAR 212

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASH- 120
           DSKLP+STVEAINKTIS+SDQC+NLKNE DKNCNP+VSLARGSTAAKMK  KS PKASH 
Sbjct: 213 DSKLPNSTVEAINKTISQSDQCMNLKNESDKNCNPNVSLARGSTAAKMKLDKSSPKASHD 272

Query: 121 VDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTR-GEAD 158
           VDNEHLKREHLGAAKRMFSQALGKHCR+NESLQTR GEAD
Sbjct: 273 VDNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRCGEAD 311

[Close]
BLAST of Cucsat.G8736.T13 vs. ExPASy TrEMBL
Match: A0A5A7U0E9 (R3H domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G002180 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 5.91e-90
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTH+GEDNEPLKPKPRCDPAVARRMIAHALGQRVNS  EDTNCH+K QG V NNAYIQAR
Sbjct: 184 MTHIGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSFPEDTNCHRKVQG-VANNAYIQAR 243

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASH- 120
           DSKLP+STVEAINKTIS+SDQC+NLKNE DKNCNP+VSLARGSTAAKMK  KS PKASH 
Sbjct: 244 DSKLPNSTVEAINKTISQSDQCMNLKNESDKNCNPNVSLARGSTAAKMKLDKSSPKASHD 303

Query: 121 VDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTR-GEAD 158
           VDNEHLKREHLGAAKRMFSQALGKHCR+NESLQTR GEAD
Sbjct: 304 VDNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRCGEAD 342

[Close]
BLAST of Cucsat.G8736.T13 vs. ExPASy TrEMBL
Match: A0A5D3CAI2 (R3H domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001710 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 1.09e-88
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0 

Query: 1   MTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQAR 60
           MTH+GEDNEPLKPKPRCDPAVARRMIAHALGQRVNS  EDTNCH+K QG V NNAYIQAR
Sbjct: 281 MTHIGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSFPEDTNCHRKVQG-VANNAYIQAR 340

Query: 61  DSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASH- 120
           DSKLP+STVEAINKTIS+SDQC+NLKNE DKNCNP+VSLARGSTAAKMK  KS PKASH 
Sbjct: 341 DSKLPNSTVEAINKTISQSDQCMNLKNESDKNCNPNVSLARGSTAAKMKLDKSSPKASHD 400

Query: 121 VDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTR-GEAD 158
           VDNEHLKREHLGAAKRMFSQALGKHCR+NESLQTR GEAD
Sbjct: 401 VDNEHLKREHLGAAKRMFSQALGKHCRKNESLQTRCGEAD 439

The following BLAST results are available for this feature:
BLAST of Cucsat.G8736.T13 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G8736.T13 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152835.11.01e-10799.37R3H domain-containing protein 1 isoform X2 [Cucumis sativus] >KGN61245.1 hypothe... [more]
XP_011648991.11.05e-10799.37R3H domain-containing protein 1 isoform X1 [Cucumis sativus][more]
XP_008441899.14.42e-9088.75PREDICTED: uncharacterized protein LOC103485903 isoform X2 [Cucumis melo][more]
XP_008441898.14.57e-9088.75PREDICTED: uncharacterized protein LOC103485903 isoform X1 [Cucumis melo][more]
KAA0047706.11.22e-8988.75R3H domain-containing protein 1 isoform X1 [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G8736.T13 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH154.91e-10899.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074070 PE=4 SV=1[more]
A0A1S3B4H82.14e-9088.75uncharacterized protein LOC103485903 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B4G22.21e-9088.75uncharacterized protein LOC103485903 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7U0E95.91e-9088.75R3H domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3CAI21.09e-8888.75R3H domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=119469... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..123
NoneNo IPR availablePANTHERPTHR15672:SF25RNA-BINDING SUPPRESSOR OF PAS KINASE PROTEIN 1coord: 6..151
NoneNo IPR availablePANTHERPTHR15672CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEINcoord: 6..151

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G8736Cucsat.G8736gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8736.T13.E1Cucsat.G8736.T13.E1exon
Cucsat.G8736.T13.E2Cucsat.G8736.T13.E2exon
Cucsat.G8736.T13.E3Cucsat.G8736.T13.E3exon
Cucsat.G8736.T13.E4Cucsat.G8736.T13.E4exon
Cucsat.G8736.T13.E5Cucsat.G8736.T13.E5exon
Cucsat.G8736.T13.E6Cucsat.G8736.T13.E6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8736.T13.C1Cucsat.G8736.T13.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G8736.T13Cucsat.G8736.T13-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding