Cucsat.G849.T32 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCCCAAAAAGTCTTTTTTCCATCAAAATAATCTCATTTTTTTTTGGCAATTTCCCATCCCAATTCAGTGCCGGCGGTGACTCAGTGGTCACTCAGCAGTCAGCCACGCCGTTCGACAAGTGTCCTACAATGGCGTCGACTCCTACTATTAACTGCTTCGTTGTCTTCTTCTTCTTCTTCTTCTTCACAGTTTCGGTTCGATCTTCCATTTCCTCCCACTTCTCTTCTTTCCCTCAATGTTCTTGGCGTCGCTTCACACTAATGGTAACTTCTCTTCTGCTTTTACATCGCAATTTTCTCCCTATTATGCTTTTTTGTTCTTCTTTTGTTATCGGAAGGAATCATCACTTCAACGTGTTCTGGAAAAGCCCCAATTAGATACTATACCCTGCTTGTTTAAATCTTAGATTATGATTTTCCTATCCACATATTGTATAAAATAAATTACTTTTTGTTTTTCATTAGAGATGAAGAGAGGGGATGGAGGCTAGAGCTAAGAGGATATGAAGGGTTAATAATAATAACATTAATGATACTTGTATATTAATATATGATAATAATTTCAAATTGGTTGCCAAGAAGAGTATGACTTCACCAATTTAATTTAGTTTTTCTTTTTACAATTTAGGGGTAAGGGATTGGACCTCCAAGTTATATGTCATTCTTGATATTCTTATTAAGCTTTGCTATTTTTCCCACCAATTTTGTATTATTATCATATATTGCATTGCAATTATTATTAATGTTTATTATTGTTTGGGTTAGTTGCTTAAATGACATTTAAGCATAACTCAATAAATAAGTAAAATTAGAATATTTAGCCCAAAGATAAAATAATTACATATATAGCTCAAAAGAAAAAAAGTTGGGAAAAAAACTCACACCTATAAATGTTATCACTTATAGCTACTATCTAACGGTAACTTTAAATTTGAGAAATGTGTTCATGAATGGATATCAACTAAGAAGCACAAACACCGATAGGTCGATTTCTAAAATTTTAGGATACTGACACGTGTAAGCACAATGAATTGCTATCGTTGACAGCTATCAGGGATGGAAACATGTCCATTGATAGCTATTAGCAATGAAAACATGTGCATTGAAGGGTACACCTAGAATTCTAAAAATTTTACAAGTTGATTGGTATTTGTTATACTTACAACTATTTCAAAGTTACGTTATATTTTTATACTATTTTCCTAATTGTGTTATTTGCTATAATTTTCTTTATTGTTATGGAGCATTTTCCAATATAGCAAAAACTTGGTTAAATTTCTCACTCAGAACTTGTCATCTGACATGTTATTTTCCTAAACCTGGGGATAATTGTGAGACCATTTAAAAGTATTTTACAAATCTCAGGAATTGAAGGACAACTTTTAGAACTTCGGATTAGCTCGTTTACACGGTTGGAAATTTAGAAACTTAGCTCTTGCTATAACTTTCAAAAGTAAATTGATAGATGTCGGTTGAGGCTCTTGGTTGCATTGAGGTGGGCCAAATTTTACTCGATTCTTTATTTATAGAGAAAGCCAAAATTTACCATAGAGAGTAATTTTGTAATTCCTAATCTAGGTCCCAAATGAAAGGACCAAACTCACAATGTTCTGTTTTTTTATTCAAGTGCAAAAACTATCACAAACACTAATTATAATAAGTGTTTAGAAGTTTGATATTCACTAATATATTAAGCTCTCAGTCTTACAGGAATATCGATGTAAATTAAAATGTCGATATCAATATTTTGTAAAATAATAATAAAAAGTAAAAAGATTGTTTAAATGAATCAGTAAACATTTCTCATTCATTAATAAAATGCTTGTTATTCGTATTATATGCTATTTATATTTGCTACAATTTGTTGTTTGTGTTTCATCAGACCATATAATAAAAATGTTGACATGTGGACAAAAATTTAGTACTCTACTTCCAGGGCATTTTGAAGTCTTTTTTTGTATCTTTTTTTTAAAAACTATTCTTTCTTGATAAATGTTAAACAGATGGGAACTTATAAAAAATTCTGGAAACTTTTGTATGAAAAAGTTGGGGTTCATAAGCCATATTCTTCCTTTCTGCAGGTAACATTTGTTAATTACTCTGCTAACCAATTGTTCTACTCCATTTTCGTCTTGTTGTTTCTTTTCATGTTCTTTTCATCAGGACAGCAAGAAAGACTCTGAGTGTTTGGAAAATATGGGGAGAACATCCGTTCTGAAATGTGTATTTAGAGCACTTGATGCAGATTTCTTCAATAACACCAAGGTTCAACAAAGCACCAATTGTTTTCATGTAGTTATATATTGTGTTGTCTTTTACACTCATGTAACGTTGAGAAACTTTTGTTTTTGAGTAGAGGGATGAGGTTTTAAAGGGAGCTGAAGAACTTAATGTGCCTATAATCAGAGCCAACCGGAAGTTAGTTGCTTCTGAAAATGGAGGTCTGCATAATCCTTCCTCTTTGGTGTTCAACCCTGAGTGGGCAAATGAAAACGTTCGGCATAAGAGCAAAAGATTCTGTTATCCTCCTGTTTCTGGAATAAAGAGACCAAACAACGAAGACGATATTGCTTTCATGAGTGTACGTCTGCACTGATCTTTTTAGTTTGAATTGAAGCTAAATATGTACTTTAGTCTCGAGTGTTTGAGTTTTTTTTTTTCCTTTTTCCCTCTGATTTGGAAAAAAGGCCCACAGTTACAAATGTTGGAATTTCGTTGATCGAGTAAAAAATATGTTTTGCTTGATGTAACCATAAAATAAAATAGTATTCATTTTATATCCCTTAGCAAGTAGTAACTTGTTTGGCCCAAAATTGCTTATCGTTCTCTAAAATCCATCCATCCAAATATTGGAATACTATCAAATTAAAACCTAATTGTTTTTAGATTCATATGATCCTTCTTTTAACATTAGGGACTAAAGGGAGTGATGGTTGAATTCTATTAGGTTCTTGAACTTGGAGAACTGATTAAAACGGAGCAGATTTCATCTCAGGAGCTTGTTCGAATTTTTCTTCAGAGATTGAAAAGGTATATAAAAAACCAACTTACAGTCTTTCGGATCGAAGTTGAAGTTCTTATTTAAAAATTTTCTTTAAACAATATCAGGTACAACCATGTTCTTGAAGCTGTAGTTTCTTTTACTGAAGAACTGGCTTACAAACAAGCAAAAGAGGCTGATGAACTGTTTGCTCAAGGAGTGTATTTAGGTTCGTGTCTTTTATGATGATAATTTTTTGCCCTACTTCAATGAAAGTCGTTGATTTGGGTGATGCATTTATGAATTGTAGTTCACTGTTTGACTTTCGACTTTATTTTTCAAATGCGGTGTTAAGTTTATACTTCACTTTGAAATAAAATATTATTCTTGCAGAGTTAAATTTATACCTTTAAACTTAGAAACAAAAAGTTCTTGTTTTGCAGGTCCACTGCATGGAATTCCATATGGGTTGAAGGATATAATATCTGTTCCAGGATACAAAACAACTTGGGGTTCAAAAAGTTTTAAAGAACAAGTAATTGATGTTGAAGCTTGGGTTTATAAGCAGTACGAAAAAAATGACTAATTTATCTAAGTATATTAATTGACATCTTTGCCAATAAATCATGAATCATTTGGTTTTTAACATCTTTACAAACAAACCGCGAATCCTTTGGTTTTGCAGGTTGAAGTCAGCAGGTGCTGTTCTTGTTGCAAAACTTGTTACCGGATCACTTGCATATGATGACATCTGGTTTGGTGGTCGTACGAGGAACCCGTGGAACATTGAGGAGTTTAGTACAGGGTCATCAGCTGGACCTGCAGCATGTACTTCTGCAGGTACGATTTAGACTTGGAGCTGATGGTTTCACCACAAAATGTTTTATTTTTCTTAGCAAGTCTTAGAACATCTCCATTACAACATCATCTTGAGTATAATATTTTTGGTTGAATTCCAGCAATTTTCATTTCAACTTGAGACTTCATTGCCTTAACCATTGATTTGCTTCAGGTGTTAGGTTCTTGTGTTTCTTAAGAAAAAAAGAGCTTGTCAAGTTTGTCATAGTTTCTTGCTATAAGAATATTTCCTTCACAATTTTGGATAATGAACCCAGAGGAGATGGGGCTTTATATAATGCATTGCCCCCTTGTTTACTAGGTATGGTTCCATTTGCAATTGGATCAGAGACAATTGGTTCGATGACTTATCCTGCAGCTCGATGTGGAGTTACTGCAATCCGGCCAACATTTGGAACAGTTGGTCGCAGTGGAGTGATGAGTATTTCTGAAAGCTTGGTAGTAGCCACAAGCCCTTTTTGCTTTGTTTCTCAACTCGCCTTTTGTATTTATTCTGCTTTTATTTAACAGGATAAGCTTGGTCCATTTTGTAGAAACGCGGTTGATTGTGCAGTCGTTTTGGATGTCATTAGAGGGAAGGATCCACATGACCTCTCCTCAGTTGAGAGTTCTCTTGATGATCCATTCTCCATTGACATTTCTAAACTTACTGTTGGATATCTTGACGATGCTGACATGGAGGTCAGTAACTCCATCAGAGTAGAGCCTTCTTCTTTGACATCTTTGATGTTAACCCAACTTTTAAAATGTTTATTATAGGTTGTTCGGATTCTTTCCTCTAAGGGTGTCAATATGGTTCCATTCAACTTGTCTTATTCTGTTGATTCTGTTCAAGGCATTATTAACTTCACTATGGATGTTGATATGTTGGCTCATTTTGACGAATGGCAACGTTTGGGGCTTGATGATGAATATGAAGCTCAAGACCAATGGCCAACTGAACTCCGTCGTGCACGTTTAATCCCAGCCGTAGATTATGTTCAGGTATTGTCTACATAAAGACTCAGTCTTCATTTATCAATAAACTTGATCCCGATTAGTTCATTAGTTTACACGAGCAATAAAATTCATTAAAAACTTTACTATACTACTTTTTTCCATAGACGGAAATTGTTTGTTGCACATTCTAATGTAAGACTAAATTAATACTTATTGAAGTTCAGGAAAAACGTCGGACGAGTATAGGAAGTTAATAGTTACCAACCAGACCGTTGTGACCAATTTTTTTTTTTTAACCCTTGATTATCCAATCCATGCACAGGCACAGAGAGCAAGGGGAAAGCTAATTAGAGAAGTTAGAGAAAGTTTCAACGTTGATGCTTTAATTGGCAATGCCACTGACTGGGAGAAAGTTTGTATGGGAAATCTTGTTGGTCTGCCTATTGTTGTTGTTCCAACAGGTTTCAAAAACATCTCAAACCCACCGTCAACTGGCACCACAAGAAGAAAAACCACTATTACCACTGGCATTTATGCTCCTCCTCACAGAGATCACATTGTATGCAACTTTTTCTTTTCTTGGAATAAAAAAAATAAGACTCCTTTTGGTTTTTGTGGGTAACTACTTATTGTATTTGATGAATGATTGTTTGTGTTGTAGGCTTTAGCTTTGGCTATGGCTTACCAATCTGCAACTGATCACCACAGAGCAAAGCCACCAATAGATGACTTGGGGCCCAGTGACGTTCTTCCAGATCCACCTTTGGTATCTATTCCTCCAAGGTTATTGCACCTTTGAACATGAATCTGCACCTCTTTTCCCTTGTCTTATCTTACATTTTGGAGACTTTTGTCTTCTGTTTTTTCTTTTTGGCTATAGAGAAAAACAGAAATATAGTTTAGTCCCGAATGTTAATATGCATACATCTACGACTGCGACATTCTCGATGTCAGAGTTTTTGTATGTAAATGCTGCTTCTAGTTCAAGCTCTATCATCCATTAAGTAATATAATCAATGTTATGGAATTAAAACTAGT CCAAAAAGTCTTTTTTCCATCAAAATAATCTCATTTTTTTTTGGCAATTTCCCATCCCAATTCAGTGCCGGCGGTGACTCAGTGGTCACTCAGCAGTCAGCCACGCCGTTCGACAAGTGTCCTACAATGGCGTCGACTCCTACTATTAACTGCTTCGTTGTCTTCTTCTTCTTCTTCTTCTTCACAGTTTCGGTTCGATCTTCCATTTCCTCCCACTTCTCTTCTTTCCCTCAATGTTCTTGGCGTCGCTTCACACTAATGGACAGCAAGAAAGACTCTGAGTGTTTGGAAAATATGGGGAGAACATCCGTTCTGAAATGTGTATTTAGAGCACTTGATGCAGATTTCTTCAATAACACCAAGAGGGATGAGGTTTTAAAGGGAGCTGAAGAACTTAATGTGCCTATAATCAGAGCCAACCGGAAGTTAGTTGCTTCTGAAAATGGAGGTCTGCATAATCCTTCCTCTTTGGTGTTCAACCCTGAGTGGGCAAATGAAAACGTTCGGCATAAGAGCAAAAGATTCTGTTATCCTCCTGTTTCTGGAATAAAGAGACCAAACAACGAAGACGATATTGCTTTCATGAGTGTTCTTGAACTTGGAGAACTGATTAAAACGGAGCAGATTTCATCTCAGGAGCTTGTTCGAATTTTTCTTCAGAGATTGAAAAGGTACAACCATGTTCTTGAAGCTGTAGTTTCTTTTACTGAAGAACTGGCTTACAAACAAGCAAAAGAGGCTGATGAACTGTTTGCTCAAGGAGTGTATTTAGGTCCACTGCATGGAATTCCATATGGGTTGAAGGATATAATATCTGTTCCAGGATACAAAACAACTTGGGGTTCAAAAAGTTTTAAAGAACAAGTAATTGATGTTGAAGCTTGGGTTTATAAGCAGTACGAAAAAAATGACTAA PKSLFSIKIISFFFGNFPSQFSAGGDSVVTQQSATPFDKCPTMASTPTINCFVVFFFFFFFTVSVRSSISSHFSSFPQCSWRRFTLMDSKKDSECLENMGRTSVLKCVFRALDADFFNNTKRDEVLKGAEELNVPIIRANRKLVASENGGLHNPSSLVFNPEWANENVRHKSKRFCYPPVSGIKRPNNEDDIAFMSVLELGELIKTEQISSQELVRIFLQRLKRYNHVLEAVVSFTEELAYKQAKEADELFAQGVYLGPLHGIPYGLKDIISVPGYKTTWGSKSFKEQVIDVEAWVYKQYEKND Homology
BLAST of Cucsat.G849.T32 vs. ExPASy Swiss-Prot
Match: Q3AD36 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=gatA PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10 Identity = 36/112 (32.14%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy Swiss-Prot
Match: B0K3S3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=gatA PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.2e-10 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy Swiss-Prot
Match: Q8RC40 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=gatA PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.1e-10 Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy Swiss-Prot
Match: B0KBN4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=gatA PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.1e-10 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy Swiss-Prot
Match: Q97EX8 (Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=gatA2 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09 Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. NCBI nr
Match: XP_011650446.1 (uncharacterized protein LOC101214338 isoform X2 [Cucumis sativus]) HSP 1 Score: 516 bits (1330), Expect = 1.49e-178 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. NCBI nr
Match: XP_011650445.1 (uncharacterized protein LOC101214338 isoform X1 [Cucumis sativus] >KAE8650086.1 hypothetical protein Csa_011729 [Cucumis sativus]) HSP 1 Score: 502 bits (1293), Expect = 1.40e-172 Identity = 257/283 (90.81%), Postives = 257/283 (90.81%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. NCBI nr
Match: XP_016900589.1 (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A [Cucumis melo]) HSP 1 Score: 418 bits (1074), Expect = 4.82e-140 Identity = 205/214 (95.79%), Postives = 208/214 (97.20%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. NCBI nr
Match: TYK19429.1 (glutamyl-tRNA(Gln) amidotransferase subunit A [Cucumis melo var. makuwa]) HSP 1 Score: 414 bits (1064), Expect = 8.18e-139 Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. NCBI nr
Match: XP_038905194.1 (glutamyl-tRNA(Gln) amidotransferase subunit A [Benincasa hispida]) HSP 1 Score: 386 bits (991), Expect = 4.51e-127 Identity = 205/271 (75.65%), Postives = 218/271 (80.44%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy TrEMBL
Match: A0A0A0L5U7 (Amidase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G039330 PE=4 SV=1) HSP 1 Score: 559 bits (1441), Expect = 1.21e-194 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy TrEMBL
Match: A0A1S4DX80 (glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cucumis melo OX=3656 GN=LOC103490981 PE=4 SV=1) HSP 1 Score: 418 bits (1074), Expect = 2.33e-140 Identity = 205/214 (95.79%), Postives = 208/214 (97.20%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy TrEMBL
Match: A0A5D3D785 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00780 PE=4 SV=1) HSP 1 Score: 414 bits (1064), Expect = 3.96e-139 Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy TrEMBL
Match: A0A6J1CPF2 (uncharacterized protein LOC111013354 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013354 PE=4 SV=1) HSP 1 Score: 373 bits (958), Expect = 1.70e-122 Identity = 193/268 (72.01%), Postives = 220/268 (82.09%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. ExPASy TrEMBL
Match: A0A6J1KX47 (uncharacterized protein LOC111498360 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498360 PE=4 SV=1) HSP 1 Score: 372 bits (956), Expect = 2.94e-122 Identity = 197/268 (73.51%), Postives = 221/268 (82.46%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. TAIR 10
Match: AT5G07360.1 (Amidase family protein ) HSP 1 Score: 295.4 bits (755), Expect = 5.1e-80 Identity = 143/214 (66.82%), Postives = 172/214 (80.37%), Query Frame = 0
BLAST of Cucsat.G849.T32 vs. TAIR 10
Match: AT5G07360.2 (Amidase family protein ) HSP 1 Score: 295.4 bits (755), Expect = 5.1e-80 Identity = 143/214 (66.82%), Postives = 172/214 (80.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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