Cucsat.G849.T27 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAAAGTCTTTTTTCCATCAAAATAATCTCATTTTTTTTTGGCAATTTCCCATCCCAATTCAGTGCCGGCGGTGACTCAGTGGTCACTCAGCAGTCAGCCACGCCGTTCGACAAGTGTCCTACAATGGCGTCGACTCCTACTATTAACTGCTTCGTTGTCTTCTTCTTCTTCTTCTTCTTCACAGTTTCGGTTCGATCTTCCATTTCCTCCCACTTCTCTTCTTTCCCTCAATGTTCTTGGCGTCGCTTCACACTAATGGTAACTTCTCTTCTGCTTTTACATCGCAATTTTCTCCCTATTATGCTTTTTTGTTCTTCTTTTGTTATCGGAAGGAATCATCACTTCAACGTGTTCTGGAAAAGCCCCAATTAGATACTATACCCTGCTTGTTTAAATCTTAGATTATGATTTTCCTATCCACATATTGTATAAAATAAATTACTTTTTGTTTTTCATTAGAGATGAAGAGAGGGGATGGAGGCTAGAGCTAAGAGGATATGAAGGGTTAATAATAATAACATTAATGATACTTGTATATTAATATATGATAATAATTTCAAATTGGTTGCCAAGAAGAGTATGACTTCACCAATTTAATTTAGTTTTTCTTTTTACAATTTAGGGGTAAGGGATTGGACCTCCAAGTTATATGTCATTCTTGATATTCTTATTAAGCTTTGCTATTTTTCCCACCAATTTTGTATTATTATCATATATTGCATTGCAATTATTATTAATGTTTATTATTGTTTGGGTTAGTTGCTTAAATGACATTTAAGCATAACTCAATAAATAAGTAAAATTAGAATATTTAGCCCAAAGATAAAATAATTACATATATAGCTCAAAAGAAAAAAAGTTGGGAAAAAAACTCACACCTATAAATGTTATCACTTATAGCTACTATCTAACGGTAACTTTAAATTTGAGAAATGTGTTCATGAATGGATATCAACTAAGAAGCACAAACACCGATAGGTCGATTTCTAAAATTTTAGGATACTGACACGTGTAAGCACAATGAATTGCTATCGTTGACAGCTATCAGGGATGGAAACATGTCCATTGATAGCTATTAGCAATGAAAACATGTGCATTGAAGGGTACACCTAGAATTCTAAAAATTTTACAAGTTGATTGGTATTTGTTATACTTACAACTATTTCAAAGTTACGTTATATTTTTATACTATTTTCCTAATTGTGTTATTTGCTATAATTTTCTTTATTGTTATGGAGCATTTTCCAATATAGCAAAAACTTGGTTAAATTTCTCACTCAGAACTTGTCATCTGACATGTTATTTTCCTAAACCTGGGGATAATTGTGAGACCATTTAAAAGTATTTTACAAATCTCAGGAATTGAAGGACAACTTTTAGAACTTCGGATTAGCTCGTTTACACGGTTGGAAATTTAGAAACTTAGCTCTTGCTATAACTTTCAAAAGTAAATTGATAGATGTCGGTTGAGGCTCTTGGTTGCATTGAGGTGGGCCAAATTTTACTCGATTCTTTATTTATAGAGAAAGCCAAAATTTACCATAGAGAGTAATTTTGTAATTCCTAATCTAGGTCCCAAATGAAAGGACCAAACTCACAATGTTCTGTTTTTTTATTCAAGTGCAAAAACTATCACAAACACTAATTATAATAAGTGTTTAGAAGTTTGATATTCACTAATATATTAAGCTCTCAGTCTTACAGGAATATCGATGTAAATTAAAATGTCGATATCAATATTTTGTAAAATAATAATAAAAAGTAAAAAGATTGTTTAAATGAATCAGTAAACATTTCTCATTCATTAATAAAATGCTTGTTATTCGTATTATATGCTATTTATATTTGCTACAATTTGTTGTTTGTGTTTCATCAGACCATATAATAAAAATGTTGACATGTGGACAAAAATTTAGTACTCTACTTCCAGGGCATTTTGAAGTCTTTTTTTGTATCTTTTTTTTAAAAACTATTCTTTCTTGATAAATGTTAAACAGATGGGAACTTATAAAAAATTCTGGAAACTTTTGTATGAAAAAGTTGGGGTTCATAAGCCATATTCTTCCTTTCTGCAGGTAACATTTGTTAATTACTCTGCTAACCAATTGTTCTACTCCATTTTCGTCTTGTTGTTTCTTTTCATGTTCTTTTCATCAGGACAGCAAGAAAGACTCTGAGTGTTTGGAAAATATGGGGAGAACATCCGTTCTGAAATGTGTATTTAGAGCACTTGATGCAGATTTCTTCAATAACACCAAGGTTCAACAAAGCACCAATTGTTTTCATGTAGTTATATATTGTGTTGTCTTTTACACTCATGTAACGTTGAGAAACTTTTGTTTTTGAGTAGAGGGATGAGGTTTTAAAGGGAGCTGAAGAACTTAATGTGCCTATAATCAGAGCCAACCGGAAGTTAGTTGCTTCTGAAAATGGAGGTCTGCATAATCCTTCCTCTTTGGTGTTCAACCCTGAGTGGGCAAATGAAAACGTTCGGCATAAGAGCAAAAGATTCTGTTATCCTCCTGTTTCTGGAATAAAGAGACCAAACAACGAAGACGATATTGCTTTCATGAGTGTACGTCTGCACTGATCTTTTTAGTTTGAATTGAAGCTAAATATGTACTTTAGTCTCGAGTGTTTGAGTTTTTTTTTTTCCTTTTTCCCTCTGATTTGGAAAAAAGGCCCACAGTTACAAATGTTGGAATTTCGTTGATCGAGTAAAAAATATGTTTTGCTTGATGTAACCATAAAATAAAATAGTATTCATTTTATATCCCTTAGCAAGTAGTAACTTGTTTGGCCCAAAATTGCTTATCGTTCTCTAAAATCCATCCATCCAAATATTGGAATACTATCAAATTAAAACCTAATTGTTTTTAGATTCATATGATCCTTCTTTTAACATTAGGGACTAAAGGGAGTGATGGTTGAATTCTATTAGGTTCTTGAACTTGGAGAACTGATTAAAACGGAGCAGATTTCATCTCAGGAGCTTGTTCGAATTTTTCTTCAGAGATTGAAAAGGTATATAAAAAACCAACTTACAGTCTTTCGGATCGAAGTTGAAGTTCTTATTTAAAAATTTTCTTTAAACAATATCAGGTACAACCATGTTCTTGAAGCTGTAGTTTCTTTTACTGAAGAACTGGCTTACAAACAAGCAAAAGAGGCTGATGAACTGTTTGCTCAAGGAGTGTATTTAGGTTCGTGTCTTTTATGATGATAATTTTTTGCCCTACTTCAATGAAAGTCGTTGATTTGGGTGATGCATTTATGAATTGTAGTTCACTGTTTGACTTTCGACTTTATTTTTCAAATGCGGTGTTAAGTTTATACTTCACTTTGAAATAAAATATTATTCTTGCAGAGTTAAATTTATACCTTTAAACTTAGAAACAAAAAGTTCTTGTTTTGCAGGTCCACTGCATGGAATTCCATATGGGTTGAAGGATATAATATCTGTTCCAGGATACAAAACAACTTGGGGTTCAAAAAGTTTTAAAGAACAAGTAATTGATGTTGAAGCTTGGGTTTATAAGCAGTACGAAAAAAATGACTAATTTATCTAAGTATATTAATTGACATCTTTGCCAATAAATCATGAATCATTTGGTTTTTAACATCTTTACAAACAAACCGCGAATCCTTTGGTTTTGCAGGTTGAAGTCAGCAGGTGCTGTTCTTGTTGCAAAACTTGTTACCGGATCACTTGCATATGATGACATCTGGTTTGGTGGTCGTACGAGGAACCCGTGGAACATTGAGGAGTTTAGTACAGGGTCATCAGCTGGACCTGCAGCATGTACTTCTGCAGGTACGATTTAGACTTGGAGCTGATGGTTTCACCACAAAATGTTTTATTTTTCTTAGCAAGTCTTAGAACATCTCCATTACAACATCATCTTGAGTATAATATTTTTGGTTGAATTCCAGCAATTTTCATTTCAACTTGAGACTTCATTGCCTTAACCATTGATTTGCTTCAGGTGTTAGGTTCTTGTGTTTCTTAAGAAAAAAAGAGCTTGTCAAGTTTGTCATAGTTTCTTGCTATAAGAATATTTCCTTCACAATTTTGGATAATGAACCCAGAGGAGATGGGGCTTTATATAATGCATTGCCCCCTTGTTTACTAGGTATGGTTCCATTTGCAATTGGATCAGAGACAATTGGTTCGATGACTTATCCTGCAGCTCGATGTGGAGTTACTGCAATCCGGCCAACATTTGGAACAGTTGGTCGCAGTGGAGTGATGAGTATTTCTGAAAGCTTGGTAGTAGCCACAAGCCCTTTTTGCTTTGTTTCTCAACTCGCCTTTTGTATTTATTCTGCTTTTATTTAACAGGATAAGCTTGGTCCATTTTGTAGAAACGCGGTTGATTGTGCAGTCGTTTTGGATGTCATTAGAGGGAAGGATCCACATGACCTCTCCTCAGTTGAGAGTTCTCTTGATGATCCATTCTCCATTGACATTTCTAAACTTACTGTTGGATATCTTGACGATGCTGACATGGAGGTCAGTAACTCCATCAGAGTAGAGCCTTCTTCTTTGACATCTTTGATGTTAACCCAACTTTTAAAATGTTTATTATAGGTTGTTCGGATTCTTTCCTCTAAGGGTGTCAATATGGTTCCATTCAACTTGTCTTATTCTGTTGATTCTGTTCAAGGCATTATTAACTTCACTATGGATGTTGATATGTTGGCTCATTTTGACGAATGGCAACGTTTGGGGCTTGATGATGAATATGAAGCTCAAGACCAATGGCCAACTGAACTCCGTCGTGCACGTTTAATCCCAGCCGTAGATTATGTTCAGGTATTGTCTACATAAAGACTCAGTCTTCATTTATCAATAAACTTGATCCCGATTAGTTCATTAGTTTACACGAGCAATAAAATTCATTAAAAACTTTACTATACTACTTTTTTCCATAGACGGAAATTGTTTGTTGCACATTCTAATGTAAGACTAAATTAATACTTATTGAAGTTCAGGAAAAACGTCGGACGAGTATAGGAAGTTAATAGTTACCAACCAGACCGTTGTGACCAATTTTTTTTTTTTAACCCTTGATTATCCAATCCATGCACAGGCACAGAGAGCAAGGGGAAAGCTAATTAGAGAAGTTAGAGAAAGTTTCAACGTTGATGCTTTAATTGGCAATGCCACTGACTGGGAGAAAGTTTGTATGGGAAATCTTGTTGGTCTGCCTATTGTTGTTGTTCCAACAGGTTTCAAAAACATCTCAAACCCACCGTCAACTGGCACCACAAGAAGAAAAACCACTATTACCACTGGCATTTATGCTCCTCCTCACAGAGATCACATTGTATGCAACTTTTTCTTTTCTTGGAATAAAAAAAATAAGACTCCTTTTGGTTTTTGTGGGTAACTACTTATTGTATTTGATGAATGATTGTTTGTGTTGTAGGCTTTAGCTTTGGCTATGGCTTACCAATCTGCAACTGATCACCACAGAGCAAAGCCACCAATAGATGACTTGGGGCCCAGTGACGTTCTTCCAGATCCACCTTTGGTATCTATTCCTCCAAGGTTATTGCACCTTTGAACATGAATCTGCACCTCTTTTCCCTTGTCTTATCTTACATTTTGGAGACTTTTGTCTTCTGTTTTTTCTTTTTGGCTATAGAGAAAAACAGAAATATAGTTTAGTCCCGAATGTTAATATGCATACATCTACGACTGCGACATTCTCGATGTCAGAGTTTTTGTATGTAAATGCTGCTTCTAGTTCAAGCTCTATCATCCATTAAGTAATATAATCAATGTTATGGAATTAAAACTAGTTCATATTTTCACGTCTTTCCCTTTTTATTTCTGAAAATTGTTCCAAAGCCACCTCTGTTTACAGTTTCTACGATTGTTGCTGTTGAGAGATTTGGGGTTC CCAAAAAGTCTTTTTTCCATCAAAATAATCTCATTTTTTTTTGGCAATTTCCCATCCCAATTCAGTGCCGGCGGTGACTCAGTGGTCACTCAGCAGTCAGCCACGCCGTTCGACAAGTGTCCTACAATGGCGTCGACTCCTACTATTAACTGCTTCGTTGTCTTCTTCTTCTTCTTCTTCTTCACAGTTTCGGTTCGATCTTCCATTTCCTCCCACTTCTCTTCTTTCCCTCAATGTTCTTGGCGTCGCTTCACACTAATGATGGGAACTTATAAAAAATTCTGGAAACTTTTGTATGAAAAAGTTGGGGTTCATAAGCCATATTCTTCCTTTCTGCAGGACAGCAAGAAAGACTCTGAGTGTTTGGAAAATATGGGGAGAACATCCGTTCTGAAATGTGTATTTAGAGCACTTGATGCAGATTTCTTCAATAACACCAAGAGGGATGAGGTTTTAAAGGGAGCTGAAGAACTTAATGTGCCTATAATCAGAGCCAACCGGAAGTTAGTTGCTTCTGAAAATGGAGGTCTGCATAATCCTTCCTCTTTGGTGTTCAACCCTGAGTGGGCAAATGAAAACGTTCGGCATAAGAGCAAAAGATTCTGTTATCCTCCTGTTTCTGGAATAAAGAGACCAAACAACGAAGACGATATTGCTTTCATGAGTGTTCTTGAACTTGGAGAACTGATTAAAACGGAGCAGATTTCATCTCAGGAGCTTGTTCGAATTTTTCTTCAGAGATTGAAAAGGTACAACCATGTTCTTGAAGCTGTAGTTTCTTTTACTGAAGAACTGGCTTACAAACAAGCAAAAGAGGCTGATGAACTGTTTGCTCAAGGAGTGTATTTAGGTCCACTGCATGGAATTCCATATGGGTTGAAGGATATAATATCTGTTCCAGGATACAAAACAACTTGGGGTTCAAAAAGTTTTAAAGAACAAGTAATTGATGTTGAAGCTTGGGTTTATAAGCAGTTGAAGTCAGCAGGTGCTGTTCTTGTTGCAAAACTTGTTACCGGATCACTTGCATATGATGACATCTGGTTTGGTGGTCGTACGAGGAACCCGTGGAACATTGAGGAGTTTAGTACAGGGTCATCAGCTGGACCTGCAGCATGTACTTCTGCAGGTATGGTTCCATTTGCAATTGGATCAGAGACAATTGGTTCGATGACTTATCCTGCAGCTCGATGTGGAGTTACTGCAATCCGGCCAACATTTGGAACAGTTGGTCGCAGTGGAGTGATGAGTATTTCTGAAAGCTTGAAACGCGGTTGA PKSLFSIKIISFFFGNFPSQFSAGGDSVVTQQSATPFDKCPTMASTPTINCFVVFFFFFFFTVSVRSSISSHFSSFPQCSWRRFTLMMGTYKKFWKLLYEKVGVHKPYSSFLQDSKKDSECLENMGRTSVLKCVFRALDADFFNNTKRDEVLKGAEELNVPIIRANRKLVASENGGLHNPSSLVFNPEWANENVRHKSKRFCYPPVSGIKRPNNEDDIAFMSVLELGELIKTEQISSQELVRIFLQRLKRYNHVLEAVVSFTEELAYKQAKEADELFAQGVYLGPLHGIPYGLKDIISVPGYKTTWGSKSFKEQVIDVEAWVYKQLKSAGAVLVAKLVTGSLAYDDIWFGGRTRNPWNIEEFSTGSSAGPAACTSAGMVPFAIGSETIGSMTYPAARCGVTAIRPTFGTVGRSGVMSISESLKRG Homology
BLAST of Cucsat.G849.T27 vs. ExPASy Swiss-Prot
Match: Q3AD36 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=gatA PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 5.4e-32 Identity = 78/209 (37.32%), Postives = 118/209 (56.46%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy Swiss-Prot
Match: B6J4H5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain CbuK_Q154) OX=434924 GN=gatA PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30 Identity = 80/204 (39.22%), Postives = 116/204 (56.86%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy Swiss-Prot
Match: B6IZ25 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain CbuG_Q212) OX=434923 GN=gatA PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30 Identity = 80/204 (39.22%), Postives = 116/204 (56.86%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy Swiss-Prot
Match: A9KBI0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain Dugway 5J108-111) OX=434922 GN=gatA PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30 Identity = 80/204 (39.22%), Postives = 116/204 (56.86%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy Swiss-Prot
Match: A9N8Z4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain RSA 331 / Henzerling II) OX=360115 GN=gatA PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30 Identity = 80/204 (39.22%), Postives = 116/204 (56.86%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. NCBI nr
Match: XP_011650445.1 (uncharacterized protein LOC101214338 isoform X1 [Cucumis sativus] >KAE8650086.1 hypothetical protein Csa_011729 [Cucumis sativus]) HSP 1 Score: 760 bits (1963), Expect = 3.31e-272 Identity = 380/382 (99.48%), Postives = 381/382 (99.74%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. NCBI nr
Match: XP_011650446.1 (uncharacterized protein LOC101214338 isoform X2 [Cucumis sativus]) HSP 1 Score: 691 bits (1784), Expect = 2.14e-245 Identity = 354/382 (92.67%), Postives = 355/382 (92.93%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. NCBI nr
Match: XP_016900589.1 (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A [Cucumis melo]) HSP 1 Score: 660 bits (1702), Expect = 3.40e-233 Identity = 325/337 (96.44%), Postives = 331/337 (98.22%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. NCBI nr
Match: XP_038905194.1 (glutamyl-tRNA(Gln) amidotransferase subunit A [Benincasa hispida]) HSP 1 Score: 616 bits (1588), Expect = 2.34e-215 Identity = 317/372 (85.22%), Postives = 333/372 (89.52%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. NCBI nr
Match: TYK19429.1 (glutamyl-tRNA(Gln) amidotransferase subunit A [Cucumis melo var. makuwa]) HSP 1 Score: 589 bits (1518), Expect = 1.43e-205 Identity = 290/300 (96.67%), Postives = 295/300 (98.33%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy TrEMBL
Match: A0A0A0L5U7 (Amidase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G039330 PE=4 SV=1) HSP 1 Score: 734 bits (1895), Expect = 1.91e-261 Identity = 375/403 (93.05%), Postives = 376/403 (93.30%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy TrEMBL
Match: A0A1S4DX80 (glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cucumis melo OX=3656 GN=LOC103490981 PE=4 SV=1) HSP 1 Score: 660 bits (1702), Expect = 1.65e-233 Identity = 325/337 (96.44%), Postives = 331/337 (98.22%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy TrEMBL
Match: A0A5D3D785 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00780 PE=4 SV=1) HSP 1 Score: 589 bits (1518), Expect = 6.94e-206 Identity = 290/300 (96.67%), Postives = 295/300 (98.33%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy TrEMBL
Match: A0A6J1G4E4 (uncharacterized protein LOC111450695 OS=Cucurbita moschata OX=3662 GN=LOC111450695 PE=4 SV=1) HSP 1 Score: 582 bits (1499), Expect = 5.35e-202 Identity = 306/393 (77.86%), Postives = 336/393 (85.50%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. ExPASy TrEMBL
Match: A0A6J1KYV3 (uncharacterized protein LOC111498360 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498360 PE=4 SV=1) HSP 1 Score: 573 bits (1476), Expect = 1.69e-198 Identity = 303/393 (77.10%), Postives = 332/393 (84.48%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. TAIR 10
Match: AT5G07360.1 (Amidase family protein ) HSP 1 Score: 479.6 bits (1233), Expect = 2.7e-135 Identity = 238/338 (70.41%), Postives = 278/338 (82.25%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. TAIR 10
Match: AT5G07360.2 (Amidase family protein ) HSP 1 Score: 459.1 bits (1180), Expect = 3.7e-129 Identity = 231/338 (68.34%), Postives = 271/338 (80.18%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. TAIR 10
Match: AT3G25660.1 (Amidase family protein ) HSP 1 Score: 98.2 bits (243), Expect = 1.7e-20 Identity = 61/197 (30.96%), Postives = 101/197 (51.27%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. TAIR 10
Match: AT1G08980.1 (amidase 1 ) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-11 Identity = 44/141 (31.21%), Postives = 69/141 (48.94%), Query Frame = 0
BLAST of Cucsat.G849.T27 vs. TAIR 10
Match: AT5G09420.1 (translocon at the outer membrane of chloroplasts 64-V ) HSP 1 Score: 66.6 bits (161), Expect = 5.4e-11 Identity = 45/143 (31.47%), Postives = 67/143 (46.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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