Cucsat.G8108.T7 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G8108.T7
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	serine/threonine-protein kinase pakD
Location	ctg1557: 384104 .. 386777 (+)
RNA-Seq Expression	Cucsat.G8108.T7
Synteny	Cucsat.G8108.T7

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATACTATAAGTTTAACATATGACAGGTTTTGCTTCTATGAAGCACCATAACACTCCAACCCCAATTAACCTCACGGCGGCGCTTTGCGGCCGGCGACAAGCGGATTGACCATCCCCCTCCAAATGGCTATTTTGCAACTGTACATTTAAAATATTCATTGAAGTCCGTAGTTCATGGACTACTCTAAACTCCCTGTTTTATAGGTCCCTCTCTCCTTTACTCTTTATAAAGTCCAAACCTACGGCGCATAAATTTCCAAATTTCAATCTCTTTCTCTCTCTTTCTTTCTGTTGTTTTTTTTTCTCTCTCTCTCTCTCACTCTGTGTCAGCACCAAGGTGCGGCCATGGCGGCAGACCAAGAAGGCAGAGAGTTGAAGTTTAACTCTAAGTTTCAGATTGAGCATGGGGATATGCAGCAGAACCCCCTTTGAAGGAGATAGTTGGCCAAGCTATTTTGGACGGTCTGATTCATTTCTCAGCTTTAATTCACCAGTTGAATCTGAGATTGGTTCCTATGAAATCGAAAGTGATAGAGATGACGGAGAGAACGATGGCGACGATTACACGGCGGAGTTGAGTCGACGGATGGCTCAGTACATGCTTCAAGATGATGATAACTCATCCACTACAAGTTTTCAATCTGAGATTCAGAACAAGGTATTGAATTTATCAAGGAGTGAGAGATTTCAGGGTGTTTGTCAAATTCTTTGTTCCTTCTCTGTTTTTTCTTGATTTTGTGGGTGTGTTTTGTTTATGGTAGTCATGGGGTTTGTCTGGTTCGCCAATTTCAACGCTGTGGTCACCTTTAGGCTCTAGCACTGGGAGTAGCCACGGAAGTCCAGAAGGGCCGTCGAAGGAGCCATCGCCTCCATCAACGCCGGTAGTTGAAGAGTGTGGAGAGCTAGACATTTCACACAACGTTTTTAGCAAATTGGAGAAGATGAAGAAAGTGAGCATAAACGGTAAATCAATCCAAACAAGCACCCAAATAGGAGAAACAGGATCTTCCTCTTCCAAGGACCAATCAAGAACTCCCAAAGTGAGATGAGAATCAAATCCCCCCAAATCTCCCCTGTTTCTTAATTTTCTTTTTCTTCTCATATCCCTTTTGCTGATTCAAAACTCAACCCTCCTTGTAGAATCAGAAACGAAGGCAGAACCAACAGCAGCAGCAGTTCATGAAGCAAAAAGGCTCAGGCACCATACAAGTCAAGCAAGCTCAAGGAAGCTCGTTACAAGCAAATTCAGGGGCAAAATCAGTAGGGCCATCAGGGACTGGCGTTTTCTTACCTCGCCATGTGAACTACAGCCGTCCAGCTCCATGTCCACAGCCACCACAGCCGCCGAAGAAAAAGGGTACTTTCTCCTTTCATTCAATAGATAGCTAATTTTTTTACATCCTTTTCAATTCGGGTTTACTAGCTAACCCCGTTAGTTGGGATTTTTCCATCAATGAATTGCCATTCAAACCATTACTCGTGATGCATTTTTGGACTTTTCCTCCTTTTTTTAAATTTTTTTTATCCCCCTTCTCTTTCTTCGGATTCATAGAGATTCCGTGTCCTCCCATATGCACTCTGAATCTATCAGGCCTTCAACCATACACGGTTGGCCCAACCAAATTTGTCCGCTACTTTGATGGAATCTTCATCCATCTCTTTAAGCCTAGCCGTTTTGGGGTCAAAAGGAGGTGGCTGAAAACGACACCCAGTTGAATCGTTAAACCACTTGCATTCCCCGCTACAGTTAAATTTTTCAATGGGTAGATAGATATGTTGTCTTCCTTTACAAGGCATAAACACTAAAGCAAATTTGCCCTTTTCCCCACCTTCTCCCTATCTCAGGCTGCTCCACTGTACTAATACCCGTGAGAGTCCTACAAGCCTTACAGCATCACTACGACAGAATGGACGACGAGACGAGACAAAAAATCACTGGCTTCACAGCTCTGAGAGGTAAATTTTCAATTCCCACCACAAAATTCTCACTGTGGCATTTTCACAAATGGTTGGTGGTCATTCCAACCATAATTAGTAGTTCACCCCATATTCAATATGGAAGATTCTCTTTTCAACATAACAACAAATTCCTATATATCTTTTCAAACAGAAGCTGCAGCTAATGCAAGAACAACAACAAATACCATTAAGAAAAGTCATACAGGAACTGCAACGGCAACGGTGACGACGGCGACAAGCCAAATCGACGTGGGCCTTCCTCAAGAATGGACATATTAATGACTTCAACAACTGGCGAGGGGCCATTTGTTCTCTGGATCACAAATCTGAAAGCTTTTTGGCGGTTTTCGTAAGTGAAAGATGGGAGATGACGTTAATGTAAATTGGAATAAAAGCCCCAACAAGTAGACGGAGAAGAAGACGAAATGAACAAAAGAATTAGGGGTTAGGGGAAACGATGTCGTTTTCTTTGACTGTCGATTAGGGGGCAAAATCGTAAATAATGTTTGGGAAATTAATATTTGTTATGAAAAAAAAAAAAGGAAATGAAAATTCCTTTTAGTAATAATTTGTCAAACAAAGGTTGTATTTTATACCCTACAATAATTGTTTAAATAATTTAATTATTCTTGTTCATCTAAACTTTTTAATACGTAATCGATAAATAAAAAATTATACATCTATCCATAAAGTATTATGGAACTGAGTTTGAT

Coding sequence (CDS)

ATGAAGAAAGTGAGCATAAACGGTAAATCAATCCAAACAAGCACCCAAATAGGAGAAACAGGATCTTCCTCTTCCAAGGACCAATCAAGAACTCCCAAAAATCAGAAACGAAGGCAGAACCAACAGCAGCAGCAGTTCATGAAGCAAAAAGGCTCAGGCACCATACAAGTCAAGCAAGCTCAAGGAAGCTCGTTACAAGCAAATTCAGGGGCAAAATCAGTAGGGCCATCAGGGACTGGCGTTTTCTTACCTCGCCATGTGAACTACAGCCGTCCAGCTCCATGTCCACAGCCACCACAGCCGCCGAAGAAAAAGGGTACTTTCTCCTTTCATTCAATAGATAGCTAA

Protein sequence

MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQAQGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKGTFSFHSIDS

Homology

[Close]

BLAST of Cucsat.G8108.T7 vs. NCBI nr
Match: XP_004145277.2 (uncharacterized protein LOC101214739 [Cucumis sativus] >XP_031741143.1 uncharacterized protein LOC116403745 [Cucumis sativus] >KAE8653272.1 hypothetical protein Csa_023347 [Cucumis sativus] >KGN66184.2 hypothetical protein Csa_019645 [Cucumis sativus])

HSP 1 Score: 194 bits (493), Expect = 5.50e-59
Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGT QVKQA
Sbjct: 143 MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTTQVKQA 202

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 106
           QGSSLQANSGAKSVGPSGTGVFLPRHVNY+RPAPCPQPPQPPKKKG
Sbjct: 203 QGSSLQANSGAKSVGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKKG 248

[Close]

BLAST of Cucsat.G8108.T7 vs. NCBI nr
Match: XP_008457429.1 (PREDICTED: uncharacterized protein LOC103497120 isoform X1 [Cucumis melo] >TYJ97364.1 uncharacterized protein E5676_scaffold194G001750 [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (481), Expect = 6.40e-57
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSI+GKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSG IQVKQA
Sbjct: 165 MKKVSIHGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 106
           QGSSLQANSGAKS GPSGTGVFLPRHVNY+RPAPCPQPPQPPKKKG
Sbjct: 225 QGSSLQANSGAKSGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKKG 270

[Close]

BLAST of Cucsat.G8108.T7 vs. NCBI nr
Match: KAA0031768.1 (uncharacterized protein E6C27_scaffold848G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (480), Expect = 9.05e-57
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSIN KSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSG IQVKQA
Sbjct: 165 MKKVSINSKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 106
           QGSSLQANSGAKS GPSGTGVFLPRHVNY+RPAPCPQPPQPPKKKG
Sbjct: 225 QGSSLQANSGAKSGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKKG 270

[Close]

BLAST of Cucsat.G8108.T7 vs. NCBI nr
Match: XP_008457430.1 (PREDICTED: uncharacterized protein LOC103497120 isoform X2 [Cucumis melo])

HSP 1 Score: 187 bits (475), Expect = 2.62e-56
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSI+GKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSG IQVKQA
Sbjct: 165 MKKVSIHGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKK 105
           QGSSLQANSGAKS GPSGTGVFLPRHVNY+RPAPCPQPPQPPKKK
Sbjct: 225 QGSSLQANSGAKSGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKK 269

[Close]

BLAST of Cucsat.G8108.T7 vs. NCBI nr
Match: XP_038895137.1 (uncharacterized protein LOC120083444 isoform X3 [Benincasa hispida])

HSP 1 Score: 166 bits (421), Expect = 6.98e-48
Identity = 92/107 (85.98%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVS NGKSIQTS QIGET SSSSK+QSRT KNQ+RRQNQQQQQF+KQKGS  IQ KQA
Sbjct: 165 MKKVSTNGKSIQTSPQIGETESSSSKNQSRTSKNQERRQNQQQQQFIKQKGSAAIQAKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKGT 107
           QGSSLQANSGAKS G SGTGVFLPRHVNY+RPAPC QPPQPPKKKG+
Sbjct: 225 QGSSLQANSGAKSGGSSGTGVFLPRHVNYNRPAPCSQPPQPPKKKGS 271

[Close]

BLAST of Cucsat.G8108.T7 vs. ExPASy TrEMBL
Match: A0A0A0M0L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525320 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 1.66e-60
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA
Sbjct: 143 MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 202

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 106
           QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG
Sbjct: 203 QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 248

[Close]

BLAST of Cucsat.G8108.T7 vs. ExPASy TrEMBL
Match: A0A5D3BEB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001750 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 3.10e-57
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSI+GKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSG IQVKQA
Sbjct: 165 MKKVSIHGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 106
           QGSSLQANSGAKS GPSGTGVFLPRHVNY+RPAPCPQPPQPPKKKG
Sbjct: 225 QGSSLQANSGAKSGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKKG 270

[Close]

BLAST of Cucsat.G8108.T7 vs. ExPASy TrEMBL
Match: A0A1S3C665 (uncharacterized protein LOC103497120 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497120 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 3.10e-57
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSI+GKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSG IQVKQA
Sbjct: 165 MKKVSIHGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 106
           QGSSLQANSGAKS GPSGTGVFLPRHVNY+RPAPCPQPPQPPKKKG
Sbjct: 225 QGSSLQANSGAKSGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKKG 270

[Close]

BLAST of Cucsat.G8108.T7 vs. ExPASy TrEMBL
Match: A0A5A7SMB3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00070 PE=4 SV=1)

HSP 1 Score: 189 bits (480), Expect = 4.38e-57
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSIN KSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSG IQVKQA
Sbjct: 165 MKKVSINSKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKG 106
           QGSSLQANSGAKS GPSGTGVFLPRHVNY+RPAPCPQPPQPPKKKG
Sbjct: 225 QGSSLQANSGAKSGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKKG 270

[Close]

BLAST of Cucsat.G8108.T7 vs. ExPASy TrEMBL
Match: A0A1S3C6T0 (uncharacterized protein LOC103497120 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497120 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 1.27e-56
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQA 60
           MKKVSI+GKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSG IQVKQA
Sbjct: 165 MKKVSIHGKSIQTSTQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQA 224

Query: 61  QGSSLQANSGAKSVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKK 105
           QGSSLQANSGAKS GPSGTGVFLPRHVNY+RPAPCPQPPQPPKKK
Sbjct: 225 QGSSLQANSGAKSGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKK 269

The following BLAST results are available for this feature:

BLAST of Cucsat.G8108.T7 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G8108.T7 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145277.2	5.50e-59	98.11	uncharacterized protein LOC101214739 [Cucumis sativus] >XP_031741143.1 uncharact...	[more]
XP_008457429.1	6.40e-57	96.23	PREDICTED: uncharacterized protein LOC103497120 isoform X1 [Cucumis melo] >TYJ97...	[more]
KAA0031768.1	9.05e-57	96.23	uncharacterized protein E6C27_scaffold848G00070 [Cucumis melo var. makuwa]	[more]
XP_008457430.1	2.62e-56	96.19	PREDICTED: uncharacterized protein LOC103497120 isoform X2 [Cucumis melo]	[more]
XP_038895137.1	6.98e-48	85.98	uncharacterized protein LOC120083444 isoform X3 [Benincasa hispida]	[more]

BLAST of Cucsat.G8108.T7 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0L9	1.66e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525320 PE=4 SV=1	[more]
A0A5D3BEB2	3.10e-57	96.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C665	3.10e-57	96.23	uncharacterized protein LOC103497120 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7SMB3	4.38e-57	96.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C6T0	1.27e-56	96.19	uncharacterized protein LOC103497120 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G8108	Cucsat.G8108	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8108.T7.E1	Cucsat.G8108.T7.E1	exon
Cucsat.G8108.T7.E2	Cucsat.G8108.T7.E2	exon
Cucsat.G8108.T7.E3	Cucsat.G8108.T7.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8108.T7.C1	Cucsat.G8108.T7.C1	CDS
Cucsat.G8108.T7.C2	Cucsat.G8108.T7.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8108.T7	Cucsat.G8108.T7-protein	polypeptide