
Cucsat.G8108.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTGAAAGTAGAGGCCAAGAGGGATCCAAAAGCCCCAACTCTTGATGGATACTATAAGTTTAACATATGACAGGTTTTGCTTCTATGAAGCACCATAACACTCCAACCCCAATTAACCTCACGGCGGCGCTTTGCGGCCGGCGACAAGCGGATTGACCATCCCCCTCCAAATGGCTATTTTGCAACTGTACATTTAAAATATTCATTGAAGTCCGTAGTTCATGGACTACTCTAAACTCCCTGTTTTATAGGTCCCTCTCTCCTTTACTCTTTATAAAGTCCAAACCTACGGCGCATAAATTTCCAAATTTCAATCTCTTTCTCTCTCTTTCTTTCTGTTGTTTTTTTTTCTCTCTCTCTCTCTCACTCTGTGTCAGCACCAAGGTGCGGCCATGGCGGCAGACCAAGAAGGCAGAGAGTTGAAGTTTAACTCTAAGTTTCAGATTGAGCATGGGGATATGCAGCAGAACCCCCTTTGAAGGAGATAGTTGGCCAAGCTATTTTGGACGGTCTGATTCATTTCTCAGCTTTAATTCACCAGTTGAATCTGAGATTGGTTCCTATGAAATCGAAAGTGATAGAGATGACGGAGAGAACGATGGCGACGATTACACGGCGGAGTTGAGTCGACGGATGGCTCAGTACATGCTTCAAGATGATGATAACTCATCCACTACAAGTTTTCAATCTGAGATTCAGAACAAGGTATTGAATTTATCAAGGAGTGAGAGATTTCAGGGTGTTTGTCAAATTCTTTGTTCCTTCTCTGTTTTTTCTTGATTTTGTGGGTGTGTTTTGTTTATGGTAGTCATGGGGTTTGTCTGGTTCGCCAATTTCAACGCTGTGGTCACCTTTAGGCTCTAGCACTGGGAGTAGCCACGGAAGTCCAGAAGGGCCGTCGAAGGAGCCATCGCCTCCATCAACGCCGGTAGTTGAAGAGTGTGGAGAGCTAGACATTTCACACAACGTTTTTAGCAAATTGGAGAAGATGAAGAAAGTGAGCATAAACGGTAAATCAATCCAAACAAGCACCCAAATAGGAGAAACAGGATCTTCCTCTTCCAAGGACCAATCAAGAACTCCCAAAGTGAGATGAGAATCAAATCCCCCCAAATCTCCCCTGTTTCTTAATTTTCTTTTTCTTCTCATATCCCTTTTGCTGATTCAAAACTCAACCCTCCTTGTAGAATCAGAAACGAAGGCAGAACCAACAGCAGCAGCAGTTCATGAAGCAAAAAGGCTCAGGCACCATACAAGTCAAGCAAGCTCAAGGAAGCTCGTTACAAGCAAATTCAGGGGCAAAATCAGTAGGGCCATCAGGGACTGGCGTTTTCTTACCTCGCCATGTGAACTACAGCCGTCCAGCTCCATGTCCACAGCCACCACAGCCGCCGAAGAAAAAGGGTACTTTCTCCTTTCATTCAATAGATAGCTAATTTTTTTACATCCTTTTCAATTCGGGTTTACTAGCTAACCCCGTTAGTTGGGATTTTTCCATCAATGAATTGCCATTCAAACCATTACTCGTGATGCATTTTTGGACTTTTCCTCCTTTTTTTAAATTTTTTTTATCCCCCTTCTCTTTCTTCGGATTCATAGAGATTCCGTGTCCTCCCATATGCACTCTGAATCTATCAGGCCTTCAACCATACACGGTTGGCCCAACCAAATTTGTCCGCTACTTTGATGGAATCTTCATCCATCTCTTTAAGCCTAGCCGTTTTGGGGTCAAAAGGAGGTGGCTGAAAACGACACCCAGTTGAATCGTTAAACCACTTGCATTCCCCGCTACAGTTAAATTTTTCAATGGGTAGATAGATATGTTGTCTTCCTTTACAAGGCATAAACACTAAAGCAAATTTGCCCTTTTCCCCACCTTCTCCCTATCTCAGGCTGCTCCACTGTACTAATACCCGTGAGAGTCCTACAAGCCTTACAGCATCACTACGACAGAATGGACGACGAGACGAGACAAAAAATCACTGGCTTCACAGCTCTGAGAGGTAAATTTTCAATTCCCACCACAAAATTCTCACTGTGGCATTTTCACAAATGGTTGGTGGTCATTCCAACCATAATTAGTAGTTCACCCCATATTCAATATGGAAGATTCTCTTTTCAACATAACAACAAATTCCTATATATCTTTTCAAACAGAAGCTGCAGCTAATGCAAGAACAACAACAAATACCATTAAGAAAAGTCATACAGGAACTGCAACGGCAACGGTGACGACGGCGACAAGCCAAATCGACGTGGGCCTTCCTCAAGAATGGACATATTAATGACTTCAACAACTGGCGAGGGGCCATTTGTTCTCTGGATCACAAATCTGAAAGCTTTTTGGCGGTTTTCGTAAGTGAAAGATGGGAGATGACGTTAATGTAAATTGGAATAAAAGCCCCAACAAGTAGACGGAGAAGAAGACGAAATGAACAAAAGAATTAGGGGTTAGGGGAAACGATGTCGTTTTCTTTGACTGTCGATTAGGGGGCAAAATCGTAAATAA ATGGGGATATGCAGCAGAACCCCCTTTGAAGGAGATAGTTGGCCAAGCTATTTTGGACGGTCTGATTCATTTCTCAGCTTTAATTCACCAGTTGAATCTGAGATTGGTTCCTATGAAATCGAAAGTGATAGAGATGACGGAGAGAACGATGGCGACGATTACACGGCGGAGTTGAGTCGACGGATGGCTCAGTACATGCTTCAAGATGATGATAACTCATCCACTACAAGTTTTCAATCTGAGATTCAGAACAAGTCATGGGGTTTGTCTGGTTCGCCAATTTCAACGCTGTGGTCACCTTTAGGCTCTAGCACTGGGAGTAGCCACGGAAGTCCAGAAGGGCCGTCGAAGGAGCCATCGCCTCCATCAACGCCGGTAGTTGAAGAGTGTGGAGAGCTAGACATTTCACACAACGTTTTTAGCAAATTGGAGAAGATGAAGAAAGTGAGCATAAACGGTAAATCAATCCAAACAAGCACCCAAATAGGAGAAACAGGATCTTCCTCTTCCAAGGACCAATCAAGAACTCCCAAAGTGAGATGA MGICSRTPFEGDSWPSYFGRSDSFLSFNSPVESEIGSYEIESDRDDGENDGDDYTAELSRRMAQYMLQDDDNSSTTSFQSEIQNKSWGLSGSPISTLWSPLGSSTGSSHGSPEGPSKEPSPPSTPVVEECGELDISHNVFSKLEKMKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKVR Homology
BLAST of Cucsat.G8108.T5 vs. NCBI nr
Match: XP_004145277.2 (uncharacterized protein LOC101214739 [Cucumis sativus] >XP_031741143.1 uncharacterized protein LOC116403745 [Cucumis sativus] >KAE8653272.1 hypothetical protein Csa_023347 [Cucumis sativus] >KGN66184.2 hypothetical protein Csa_019645 [Cucumis sativus]) HSP 1 Score: 332 bits (850), Expect = 5.99e-112 Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. NCBI nr
Match: XP_008457430.1 (PREDICTED: uncharacterized protein LOC103497120 isoform X2 [Cucumis melo]) HSP 1 Score: 316 bits (810), Expect = 6.51e-106 Identity = 167/177 (94.35%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. NCBI nr
Match: XP_008457429.1 (PREDICTED: uncharacterized protein LOC103497120 isoform X1 [Cucumis melo] >TYJ97364.1 uncharacterized protein E5676_scaffold194G001750 [Cucumis melo var. makuwa]) HSP 1 Score: 316 bits (810), Expect = 1.48e-105 Identity = 167/177 (94.35%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. NCBI nr
Match: KAA0031768.1 (uncharacterized protein E6C27_scaffold848G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 316 bits (809), Expect = 2.10e-105 Identity = 167/177 (94.35%), Postives = 168/177 (94.92%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. NCBI nr
Match: XP_038895137.1 (uncharacterized protein LOC120083444 isoform X3 [Benincasa hispida]) HSP 1 Score: 293 bits (751), Expect = 1.46e-96 Identity = 156/177 (88.14%), Postives = 162/177 (91.53%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. ExPASy TrEMBL
Match: A0A0A0M0L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525320 PE=4 SV=1) HSP 1 Score: 332 bits (850), Expect = 2.90e-112 Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. ExPASy TrEMBL
Match: A0A1S3C6T0 (uncharacterized protein LOC103497120 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497120 PE=4 SV=1) HSP 1 Score: 316 bits (810), Expect = 3.15e-106 Identity = 167/177 (94.35%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. ExPASy TrEMBL
Match: A0A5D3BEB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001750 PE=4 SV=1) HSP 1 Score: 316 bits (810), Expect = 7.16e-106 Identity = 167/177 (94.35%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. ExPASy TrEMBL
Match: A0A1S3C665 (uncharacterized protein LOC103497120 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497120 PE=4 SV=1) HSP 1 Score: 316 bits (810), Expect = 7.16e-106 Identity = 167/177 (94.35%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G8108.T5 vs. ExPASy TrEMBL
Match: A0A5A7SMB3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00070 PE=4 SV=1) HSP 1 Score: 316 bits (809), Expect = 1.02e-105 Identity = 167/177 (94.35%), Postives = 168/177 (94.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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