Cucsat.G7959.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAACCGGCTTAAGTTTCGATTGCATCGGTTGAGAAAACGGAAATTTGAATGGCATTGGTCTTTGACAAAACTGAAAGGGTTTGTTAGAGTTCCTTCTTCAGAAAAGGAAGTTGAAGTTCTGAGAGCAGCTGAGGAATTTGAAGCATTCAACAGAGTATGTTTGACCTATTCAAGTGAAGAGAAGGAAAGATTCTTTGGTTTTGGAGAGCAATTCTCTCATATGGACTTCAAGGGAAAAAGAGTACCAATCTTTGTTCAAGAACAGGGAATTGGTAGAGGAGATCAACCTATAACTTTTGCAGCCAATCTAATTAGTTACAGGTAAGTTCAGTCCATCTTTAACAATGATTTCGAAACTGTTAAAAATATTTTTGTCTATGTTTAAAATAACTCCACAGACCACACCACTTATTTGATAACCCAAAATCAATTTAATATTTAATTCTAACATTTGATAAGCATATTTCATACTATTCAAATGGGTGTCGAATGATCAAGAGCAATCTTGGAGTTAAATAACAAACATGTCATTAACAGACAAAAGGTACACGTATCCATCTCTTAACTTTAAAACTAAGTTTGAGAGTTTTTTTTTCACTTCAGGGCTGGTGGTGATTGGAGTACTACATATGCTCCTTCTCCATTTTACATGACATCCAAAATGAGGTCTCTGTACCTTGAAGGATATGAGTACTCTATATTTGATCTGACAAAGAATGATAGAGTTCAGATTCAGGTACACTTTTATTAACTATTGCTCTTCATTGCCTTTCACCAACCTAAATAGCCGTAAAGTGTTTGAATAGAGATTTAATTTAGACTAAAGGAAAACGTACAACAGAAATAGAACAATACCAAAAAACTAAAGATAGAGCATGCAAGGAATAATAACAATAATGAGTTTTGGTTCATTTAACACAAAATTAGAGAGTGAAGAAACAAGATCTGAACTCTTCATCTTAGGATACCCAAGTCCAGGTAAGACGCTCATATACAAACTTTTAACTTACAGTATTCCCATTTCTGTGAACTGGTGGAGATTGCAGATTCATGGAAATTCAGTTCAAGGAAGGATATTGCATGGGAACTCACCTTCAGAGCTTATCGAACGTTTTACTGAGACCATTGGGAGGCCTCCAGAGCTTCCTGGATGGATAATATCAGGTGCGGTTGTAGGGATGCAAGGTGGGACCAATGTTGTTCGAAAAATCTGGGATGAGCTAAAAGCTCATGAAGTTCCCATTTCTGCATTTTGGTTGCAGGTAATACAAGTTTGTCATTTCCAAAAGTTAGTAATACATTTCTGGATCAAATTAAGCATCTTGTACTGTAGATCAAGCCAAATCCAAAAAGTGATGCACAGATATATAGTATTTATTACATGCTTTCATAATAATATAGTTTTTCTAAAGTGTATACACATTCTTTTAGATTTATTCCTTATCTAAAAGAAGCATGTTGTGTAGGATTGGGTAGGGCAGAGAGAAACAGTAATTGGATCACAATTGTGGTGGAACTGGGAAGTTGATGCAACAAGATACTCTGGATGGAAACAATTAATTAAAGATCTTGGAGCTCGGCATATAAAAGTAATGACATACTGCAATCCCTGCCTAGCACCGGTATTTTCTTCTTCCACCCTCTCAATCCTTCTGCAATCACCAAATCAGAAATATTGTTACTACGCTTGCATGTTAAAAGCATGGCATCTCTCTACTCTTCTTTCTTTTCTTCTTTTCCACCTAGACATATACACTACCTTCTTAATGGCTAACTAAATGAACAGAGATAAAAGAGTAAAGACTGATCATTGTAGTTTCAAATTTGTACATGACTTCAGACAGATGAGAAGCAGAACAGAAGGAGAAATCTTTATGAGGAAGCAAAGGCGTTGGGGATCTTAATAAAGAAGAAAAATGGAGAACCCTACATGGTTCCCAACACGGCTTTTGACGTGGGAATGTTGGATCTTACGCACCCAAATACTTCCAGTTGGTTCAAGAAAATTCTACAAGAAATGGTGAATGATGGTGTGAGAGGATGGATGGCTGATTTCGGCGAAGGCTTGCCTGTAGATGCCACCCTCTATTCAGGTTATACTAAGAAAATATTAGAGTTCAATGTCAATATTTGTACTCAATTTCAAAATAACTATCTAAGGAGTATAATATCTTATACTTAAAGGCGGACTTATTACATTGATTTTCTCAAAATCAATTGCTAAAGACTAAAGAGTCTTTTAAAAAAATCTATCACTAAAATTTTGAACTGCTTCATAGAAATCATGTAGTTGTTTCCTTGGTTGGAGATGGGCGGGAAAGGAAGGAGTGATATACAATGTGATCGATCTTACATGCTTCTTTGAACATATCTCCAAGTCGAGATGGACTTGAAATTTTTGTAATCCCCGAAAGCAAAGGTCATCAAATGAGTTTCAAACTCTCTAGTTTTTTTTTTTTTCAATACAATCATGTCGCATCCTGAACAAGAAGCTGATACAGATGGAATTGATCTTCACTAAAATACTTTAAATTTACCTTAATCAGAACTGCATACTTTCCCTCTGTGGGATATTAATATTACTCACAGATTAAGAACCGTAATTTCAGGTGAAGATCCTATTACTGCACATAATAGATATCCAGAAATATGGGCGCAGATTAACAGAGAATTTGTAGATGAATGGAAAAGTAAACTTGTTGGTAAGGAGAAAGAAGACCCAGAAGAGGCCTTAGTTTTCTTCATGAGAGCTGGTTTCAGAAACAGTCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTAAGTTGGCAAGCCAATGATGGGATAAAGAGTGCTGTTACTGGTCTTTTGAGCAGTGGACTTTCGGGTTATGCTTTTAATCACAGTGATATAGGAGGGTACTGTGCAGTAAATTTACCCTTCATCAAATACCGAAGAAGTGAGGAGCTGCTTCTACGATGGATGGAGTTAAATGCATTTACCACGGTTTTCAGAACCCATGAAGTAAGTTAGAAACCAACCTTACTTTTTTCCTTCTGTTTTATCTGTCCTTTCTCTGACTAGAACCAAAACCTGAAAAAGAACTAAACAAAAACTGTTGAAATTGCATATTTATTGAGTAATCTTCTTATCATTTTCTTTCTATACTTTTCACATTTACCAAAAAACTTCAACTTTCCATCTTTTCTTTTCACATTGATAGAGAAATTCATCATTCCTTCTTAATCTATTTCACATTTATCAAGAAATCCATTTTAGAATTCTACACCCCAAGTACAAACTTACCAACTCCAACATATAAGCCCCATTTTACAACTCTACACTCAACACTAGACTTATTAACTCCACTCAGGAGACCAAACGCTCCCTATGTATGGCATCAAATTTACAGTCAGACACATGAAACCCTAAATGCATAGGAAGCCCTGTCAAGATTTTATCTTCACTAAAATTCACCAAACATATAGAAGCTTAACCTGCACCGAGCATTATATACAAATCAGCTTCAGTTTGGGAAGACTGAATTATCATATATACTTCTACAACCATATAAAGCTTGCGTCAGAGTATTATTATCCTCTACAAATTTTCAACATACTGAGTCTTCTTAAAGCACTATTTCCAACTGTCTCCGTATATAGGGAAACAAACCATCCTGCAACAGCCAATTCTACTCAAGCGATCGAACATTGTCGCAGTTTGCTCGCTTTGCTAAGGTCTATAGCGCTTGGAAGTTTTATAGAATCCAACTGGTGAAGGTAAATATGCAACCTTTTACATTCCATCTGCAACTTCTATATTTTCAAATTCCTCACAGGTCTGATGATCTTTTTCCTCTGTTCTGGGTCATGAAACAATACAGGAAGCAGCTGAAAGAGGCCTACCTGTATGCCGCCACCTTTTCGTTCACTACCCAGAAGATGAGTACGTGCTTACATTAGGTCACCAGCAGTTTTTAGTTGGTTCTGAGATCCTAGTTGTGCCTGTCCTTGACAAAGGCAAGAACAATGCCAATGCCTACTTTCCTTTAGGTGACAGTTCTTCATGGCAACATATATGGACAGGGGAGGTGTATGCTAAACTCGGATGCGAAATTAAAGTAGACGCTCCAGTTGGCTATCCAGCTGTGTTTATCAAGGTTGGGTCAATTGTAGGGGAAACCTTCATTAGAAACCTGAAAATGTTCAACATTCTTTAAGAAAGCGACCCTTAAAACTGGGGGTAGCTCACGATTCATTGAATTTTAATCTAGACTATATTTTCCCCCTATACTTCATTACTTAGTTCATCAATAATCCAATTAAACGAAATCTAAAAACTGAGAATGCATCTAAATGACTAGTTTATATGAATTGCCAGAGCTAAAATGAGAAATATAATAAGGATGTGATCAGTTACGATGTTATGAAACATGGAGATCAAGTGAATAAAAGCAAAGGAGTGTACATATAAGTGAAAGTAGAAGAACAAAAACTAATGTGCTTATTTCAATGAAAGTGGGGTGCAGCCTGCGGGAATAAGTGTACTTTCAATTATAACCTAGGGATTAAATTATTTAACTATGTTGTAAAATCATATCATATACAAACAGATAACTTATGCTACATAGTTGTTGAATTTTCATGTCTTTTATCGTCCAAGGATCAAACTACCCCCTACCATTTTTCATGAACATTTGAAAAACCAAACTGTACTATCATCCCTTGCATCAGATAATACCTCCCGTCAATCACATTGCACAAAATAAAACAACAGAACAAAAAATACATCAAGCATAAGTCTAAGGAACGCTTGATTTCAAATACAATGCCTCGAAGCAATGGAGATTGAAATGCTTACAAAAACCTAATAGAATTAAAACCATGCATTGGAAGTGGAAAACTAACAGAGTATGGGGTTGCATACAACATTAATCTAAGGGAGTAGAGTGTAGACAAAATAGTAGTAAGTGGCAATGAGAGGATCATTGCAAAGTTTTAAAGACGAAAATATGAAAGAGATGATTGAAACTCAATTGGATGATAATTGATGAGCGGTTCTTGTTGGATCGGCTATGGGAAATCTGGGTGCGGGGAGTTGAG AACCGGCTTAAGTTTCGATTGCATCGGTTGAGAAAACGGAAATTTGAATGGCATTGGTCTTTGACAAAACTGAAAGGGTTTGTTAGAGTTCCTTCTTCAGAAAAGGAAGTTGAAGTTCTGAGAGCAGCTGAGGAATTTGAAGCATTCAACAGAGTATGTTTGACCTATTCAAGTGAAGAGAAGGAAAGATTCTTTGGTTTTGGAGAGCAATTCTCTCATATGGACTTCAAGGGAAAAAGAGTACCAATCTTTGTTCAAGAACAGGGAATTGGTAGAGGAGATCAACCTATAACTTTTGCAGCCAATCTAATTAGTTACAGGGCTGGTGGTGATTGGAGTACTACATATGCTCCTTCTCCATTTTACATGACATCCAAAATGAGGTCTCTGTACCTTGAAGGATATGAGTACTCTATATTTGATCTGACAAAGAATGATAGAGTTCAGATTCAGATTCATGGAAATTCAGTTCAAGGAAGGATATTGCATGGGAACTCACCTTCAGAGCTTATCGAACGTTTTACTGAGACCATTGGGAGGCCTCCAGAGCTTCCTGGATGGATAATATCAGGTGCGGTTGTAGGGATGCAAGGTGGGACCAATGTTGTTCGAAAAATCTGGGATGAGCTAAAAGCTCATGAAGTTCCCATTTCTGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAGAAACAGTAATTGGATCACAATTGTGGTGGAACTGGGAAGTTGATGCAACAAGATACTCTGGATGGAAACAATTAATTAAAGATCTTGGAGCTCGGCATATAAAAGTAATGACATACTGCAATCCCTGCCTAGCACCGACAGATGAGAAGCAGAACAGAAGGAGAAATCTTTATGAGGAAGCAAAGGCGTTGGGGATCTTAATAAAGAAGAAAAATGGAGAACCCTACATGGTTCCCAACACGGCTTTTGACGTGGGAATGTTGGATCTTACGCACCCAAATACTTCCAGTTGGTTCAAGAAAATTCTACAAGAAATGGTGAATGATGGTGTGAGAGGATGGATGGCTGATTTCGGCGAAGGCTTGCCTGTAGATGCCACCCTCTATTCAGAAATCATGTAG NRLKFRLHRLRKRKFEWHWSLTKLKGFVRVPSSEKEVEVLRAAEEFEAFNRVCLTYSSEEKERFFGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLISYRAGGDWSTTYAPSPFYMTSKMRSLYLEGYEYSIFDLTKNDRVQIQIHGNSVQGRILHGNSPSELIERFTETIGRPPELPGWIISGAVVGMQGGTNVVRKIWDELKAHEVPISAFWLQDWVGQRETVIGSQLWWNWEVDATRYSGWKQLIKDLGARHIKVMTYCNPCLAPTDEKQNRRRNLYEEAKALGILIKKKNGEPYMVPNTAFDVGMLDLTHPNTSSWFKKILQEMVNDGVRGWMADFGEGLPVDATLYSEIM Homology
BLAST of Cucsat.G7959.T6 vs. ExPASy Swiss-Prot
Match: P32138 (Sulfoquinovosidase OS=Escherichia coli (strain K12) OX=83333 GN=yihQ PE=1 SV=3) HSP 1 Score: 204.9 bits (520), Expect = 1.5e-51 Identity = 104/314 (33.12%), Postives = 173/314 (55.10%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy Swiss-Prot
Match: P96793 (Alpha-xylosidase XylQ OS=Lactiplantibacillus pentosus OX=1589 GN=xylQ PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.4e-20 Identity = 73/298 (24.50%), Postives = 132/298 (44.30%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy Swiss-Prot
Match: Q5AW25 (Alpha-xylosidase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=agdD PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15 Identity = 66/310 (21.29%), Postives = 123/310 (39.68%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy Swiss-Prot
Match: P31434 (Alpha-xylosidase OS=Escherichia coli (strain K12) OX=83333 GN=yicI PE=1 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 5.7e-14 Identity = 63/304 (20.72%), Postives = 126/304 (41.45%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy Swiss-Prot
Match: B3PEE6 (Oligosaccharide 4-alpha-D-glucosyltransferase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=agd31B PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.1e-12 Identity = 65/293 (22.18%), Postives = 110/293 (37.54%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. NCBI nr
Match: XP_004144332.2 (uncharacterized protein LOC101219337 [Cucumis sativus] >KGN54706.1 hypothetical protein Csa_012207 [Cucumis sativus]) HSP 1 Score: 742 bits (1915), Expect = 4.46e-262 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. NCBI nr
Match: XP_008455717.1 (PREDICTED: sulfoquinovosidase-like isoform X1 [Cucumis melo] >KAA0025932.1 sulfoquinovosidase-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 720 bits (1859), Expect = 7.10e-254 Identity = 346/359 (96.38%), Postives = 354/359 (98.61%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. NCBI nr
Match: TYK01674.1 (sulfoquinovosidase-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 712 bits (1838), Expect = 1.08e-250 Identity = 343/359 (95.54%), Postives = 351/359 (97.77%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. NCBI nr
Match: XP_038882634.1 (sulfoquinovosidase-like [Benincasa hispida]) HSP 1 Score: 702 bits (1811), Expect = 6.87e-246 Identity = 336/359 (93.59%), Postives = 350/359 (97.49%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. NCBI nr
Match: XP_016901817.1 (PREDICTED: sulfoquinovosidase-like isoform X2 [Cucumis melo]) HSP 1 Score: 686 bits (1769), Expect = 2.14e-240 Identity = 335/359 (93.31%), Postives = 343/359 (95.54%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy TrEMBL
Match: A0A0A0L3I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G430880 PE=3 SV=1) HSP 1 Score: 742 bits (1915), Expect = 2.16e-262 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy TrEMBL
Match: A0A5A7SLB8 (Sulfoquinovosidase-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002350 PE=3 SV=1) HSP 1 Score: 720 bits (1859), Expect = 3.44e-254 Identity = 346/359 (96.38%), Postives = 354/359 (98.61%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy TrEMBL
Match: A0A1S3C1N4 (sulfoquinovosidase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495822 PE=3 SV=1) HSP 1 Score: 720 bits (1859), Expect = 3.44e-254 Identity = 346/359 (96.38%), Postives = 354/359 (98.61%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy TrEMBL
Match: A0A5D3BR81 (Sulfoquinovosidase-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold517G00070 PE=3 SV=1) HSP 1 Score: 712 bits (1838), Expect = 5.23e-251 Identity = 343/359 (95.54%), Postives = 351/359 (97.77%), Query Frame = 0
BLAST of Cucsat.G7959.T6 vs. ExPASy TrEMBL
Match: A0A1S4E0P9 (sulfoquinovosidase-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495822 PE=3 SV=1) HSP 1 Score: 686 bits (1769), Expect = 1.04e-240 Identity = 335/359 (93.31%), Postives = 343/359 (95.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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