Cucsat.G7950.T9 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G7950.T9
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	tRNA-binding domain-containing protein
Location	ctg1556: 307067 .. 315489 (-)
RNA-Seq Expression	Cucsat.G7950.T9
Synteny	Cucsat.G7950.T9

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAAAGAAAAAGAAAAAGCCAAGATAGGAACCTCTTGTAGAATTCTGACAATTTACCATCTTGGCTTCTTCCATTATCTCGATATGGCGTGGGGTTTAGGAGAGTAGTGTCCTCAAACACCCACAACTGGGAACGACGGAACCGGTTCCATTGACAAGCATGGCTTCTCTCCCAACTGCCGCTGTTATTGCCAATGTTGCAAAAACTGCCACCAATGCTCGCTTTTTCTTCTTCTTCTCTTCTTCTCTTTCCCATAACTTCGACCATTATCTCCCCTCCTTCGCTCCACCTCGAACTTTTTCTCGTTTCACTCCACCCCTTCGTACGGATAATGTCGCCGGAAGAATCTCCAGAAATGGTACACAGTTTCCGTTCTCATTTTGCACTACTGCGTCCACTGAGCCGGTCACCAGTGACGCCTCCATTGCATCGTCGTCCACATCATTGGATAAGGACGAAGATGATCCGGAAAAGAATATTAAGGATGCGGCTGACATGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCTGGAGGCTGACACTCTTTATGTTGAAGAAGTTGATGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTCGATCAACTTCTGGTACTTCATTTTTCCTTCTTATGATCAATACATTTAACTTCTGGTTCATTTATATAAGAAAAATATTTGACTGGACATGCTTAAAACTTGAACTCTACCCATTTTTTATTTTACTGTTTTTCTTTTCATGGCTTATAGATCGATTCCTTTACCAATTGGAGTCTTTTCCTTTTCCTCCTATCTTGTCCCTGGTGTTTTTGCTGTATAAAGTGGAAACCTCAGGAACCAACTCAGATTGCAGTTTTAGAGACTATTAAAGGTAGAGGAACAATGTAGGACTACTTGGTCTTGTGAATCTTTTATTAAAATGATATTGTGTTTCATACAAGAGTGGAAGACTTTCCTATTTATAGAAACAAGTCGGGTGAAAAGAAAATTAACCTAGAATGCTGCCCAATTAACCTTCATTCTTCTTATAATCAAGAATTCAGAGAAAGTATATTTCTTATTCATCTAGAGTCAGAGTAAAGTTACACACATATATATATATAACAAATAAACCCTAATTGTATGTACAATTATGATAAAGAACATATATTATAAATATATATCATAACACTCTCCATCAAGCTGAAGCAAATATGTCGATCATGCCCAATTTATTTTCGTTGAGACAAATAAATACCTTTCTTGCTTCTATCACTTAAATGCTCAAAAAATATTTCAATTGGCCGAAATCTTTCGTATTAAACTGATTCTGAAGGAAATTTTTGAGAGACGAAATACCCGATGCATCATTTCCAGTAATAACAATATCATCAACATATACAACTTGTAAAATTATAACATTTTCAGATTAGCGATAGAAAGCAGAATGATCAGATTTACTCTTCTGCATACCAAAGCATACAAGAGCTTGACTAAACTTACCAAACCACGCACATGGACTCTATTTCAAACCATACAAAGATTTTCGAAGGCGACATACTTTCTCACTCTCCTCTTGAGCAACAAACCCAAATGGTTGTTCCATATAAACTTCCTCTTGAAGACCACCATGTAGAAAAACATTCTTAATGTCAAGTTGATGCAAAGGTCATTTATGGGTAGCAACCATGAAAAGAAATAGGCAAATGGAAGTTAATTTGGCAATTGGAGAAAATGTATTTGAATAATCAGTTCCATAGATTGAGCATAACCTTTAGCAACAAAGCGAGTTTTCAATTGAGCCACTGTTCCATCAGAATTCACCTTGACAACAAACACTCATTTACAACCAATGACCTTCTTTCCTGCAGGATGAGATACCAAATCCCAAGTACCATTATATGGAGTCAATAGACGTAATAAAAGCATATATGATGGGAGACGACCGGTGATAGGAAACAAAGGAAGAAACAGGGTAAGTACAGTTGCGTTTACCTTTTCGAAGAGCAATGGGAAGATCATCACTTGGCCTCGGATCACTTGATGAAGGAGGCATTGATGGAGGACATGAATCTGAAGGTTGTGGTGGAGGTTGTCGGTGTCGAAATAATGGTCAGTTGAAGATGACCTAAACTTAAGCCTAATGGAGAACGAAGCCACCAACTACGATATTCCAAATTCCAAACCCTAACGGCTTTGATACCATGTAATCAAGAATTTAAAGAAAAATATATTTCTTATTCATGTAGAGTCAGAATAAAGTTACATATATATGTATAGAGAGAGAACAAATAAACCCTAGACTGTATGTACAAGTACGATACAGGACATATATTTTAAGTATATATCATAACACTTCTTACATTAGATTTCCAAGATTAGGTCTCATAGATGAAGGAACTATCCTATAGGTGAATTATTTAGTGTGTGAATGGAAGAAGCCTCAGGGTGGAACTAAAATTAAGATAAAGTTTTTTTTGTTTTTTGCTTTCTAGAATATTTATTCCAAGATCTTGGCTGTGGGGATGGCTGCGTGAGCACAATATCTTGTAGTTCAGCACAATCATTTCACACTAATAACTAATAAGTATGGTCTGGTTTAGGTGATTGGCAGCTTAGAAATATAAAAAATGGAACTTTCAAGTTTTGGGCCTCACATTACCAATGCTTATGTTTGTGTGCTATGCATGTCGTTACCTCTTTGACTGTTATTTTGTATTTGGGACTTAGTACTAGTTGGATCTAGTTAATGTTTAGGTTCTATTAGACCTCCAATCACAAAGGTATGTTCGAAGAAGGGTAAAATAGGAAACTCGGTCCCAAATAGGAAACTCGATCCCAAGTGTAGATAACTACCCAGCTTTGCATACTGTTAAATAAAGTTGTATAGTTATTTAAAAGCAGATAAGGATGGGTAATTATTTTAGGGAGTTGTAAATGCATTTCTCTGGATATTTAAGTTTGTACTATGGATAGCTCTTGTATCATGTGGGATGGGGATGTCTGTTTCCTTGTTCAAGTCAAGTGTAAATGTCGGGAGAGAAGGTTGACCTCACCTGTTGAATTGGTCACTAATTGATAGATTGTAATCATTAAACATATTATCTAACAGTAAATAAAGAGATACTTATGATATGACCTATCATATTCATATCAAAGTAACAACTTTGGTATGGGAGAAGAAAAGAACATTATCTTAGAAGGTTTGAAGTGGTAGAAAAAGAGATGAATGCAACAATTGGAGAATTAGAGTGCTTACTCGGGATGGAGTGTGCCATTGGCAAGTTGAAGGATGAAGTCACAAATTTTAGTGGCTTTTTGAGAGACCACTACTCCAAAGAACATTAGTCATTTAGTCGGCGTCTATGCTTCATATACCTTTTGTAACCTATATTCTTTAACCGTTATTTTGCATAGCTGAAGTCCTTTTTGTAGAGGGGGTTCCTTCTTTATGGGCCTGGTTTTCTGTATGTCATTGTATTTTTTCACTTTTTCCTGATGAAAGATGTTTCCATCCAAGAAAAAAAACTTAGTTTAATATCTCGTGGAAATTTGTGATCAAGATCAAATGGATTATAGACTAAATGGGTCTTTCACCGATGATATTGTAAACTGTTTATTGTGTTTTTATTGTATGAACGGTTTAAACTTTTTACTCTACTGCAACATCCTTTACCTGTCTGATTCGAACATAACCAACATATAGGATAGAAGAGTTATTGTCCTCGCAAATTTGAAGCCAAGAAATATGCGAGGCATCAAATCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCACGAGAACGTTGAACTTCTTTTGCCTCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCTGAAGATGAAAAAGGCAACCAACCTGATGCTGCTGCCCCAAACCAGGTAAAGAAAATTCTTTTGAAAAATTTGAATCCTGCAAGACATGAATGTCATTTTATAATCTTACATATTTCAGTGCAAATTATAACATAAACTTGCGTTGACATCTACGCATCCATTACCTAAATTATTTTGATATCTGAATATCAAACTGTTACATGTGGATGATTTCCATCTCTATATGACAGTAGAACTTTTTTCCTTTTTTCTAAAAGAAAACAAAAAAGTTCATGTGGTTGATATCAAATGAGTTTTTTTTTTTGTTGCTGTGCTTTTACATCTTCACAGTATTCATGTCTGTCGTTTTACAGCCTTTTGGGGGGTGTTTGGATATCCGTAATGGGATTGGAATGCATTGTAATGTAATCTAAAATCCATGTTTGGATTGAGCGTTTTGAGTCCAAATTGTAATATTAAACTCATTTTGTTTATGTAGTTTTCAATTAAACTCTATTATCCATTGTTTTCACATTTTATGATTTCATTTTTGTTTCACCCTCAATTCGACACACATTCCAAACACTCTTTTGATTCCCAGTAATTCTTACTACATTCCAGCTCTCTAAACATCTCCTACAATCCTATTGTTCCAGAATTTCTACTTCTATGTACTCCACTAAACAATTTGTTTTGAACTACGAAAGAAGACTGTTATGCTACAGAAACGGACTGAACTTGACAAAAGGGTTGAATGCAGCCCCCACATTATCAACCAACTTACACAAATAATAAAAATGTAACTGGCAAATGAAAAGACAAATAATTACAACTGTATTCATTTTTCTATTTGAAAGTCAAGTTTTTCTATCCAAGAAGTAATAACTAAATACAATTGTCCCCAATTGTTCACATTAACAAAGGGTTTAGGGTTTCTTCGTGTCAATAAAGAAAAAAATGCTCTCTCCTCTCTCCACCAATCCCCGTTGTTTTAGCCTTCTAGCCTCCTCTATGCTACTCTTTGACGACTTAGCCAACTAGCCTCTCACTATTTCAAAGGTGCTTATTGTGTTCTCATGGAAGTCAAATGTTACTTTTTTTGGGAAAAGGAAACTATACCTTTTATTGATAAAATGAAAAGAAGAGAGTAACGTTGAAAGTACATAAATCCTTAGAAAAGAAAAGGAAGAGAACACCAAGAGAACATTTTTTTCTTTGAAAAGGAAACAAATTTCATATGTTAAATAATGAGTCAGAGCTCATAGTACAAGAGGGTTAACAATATGTAATTAAAGAACTAGGGATTAGTAGACGCACCCGGACATCTCAACTAGGTTGACACCCCTTTAACGTCCTCATCATATCCAAAAACAAAAATAAAGATAATGAAATGACATAAAGCTAAAAAAAAGTGGTCGAAAACATAAAACCTTTACATCAACATCCTTTCATGAACAAAAGACTAACTGACAAATCTAAAACGGGAAAAGCAGGGCCCTTTCCTAACTCTCCTTTGCTGGACTCAAAATGACTAAACAATAAAGGCTTGCCAGTTGAGATGAAGTCCTGTGTGGAAGAATCCTGGAATCCTTTGACCATGGAGCACCATGATGAAGCATTTAAACGGGCATACTCAAACCGATGGACCATACTAAAGCCATATTGTGGAAAACGCATTGAATCCTTTCAAACCAAATTTCTACTAATAAAGCCTTGACTGCATTGCACAATAGTATTAACTAGGTCTTCTTTAAATTTGGTCCGGAGATAATTTGTAATACCACTAAGCTGCCATAAAAAACCCATCTGAAATTAAAAATTTGCAGCAGCTTACTCCAACAGTTCGCTGCATAAGGACATTCAAAAAGTGCTGAAGATCTTGATTCATACAGCATAGATGAACCTTGTCTGTCTTTGCCTACAATAAAGCCTTCAAACAATCTCTTCGCATGCATCATTGAAATTAGGCTGCTTAAAACTTCATTTGTTAGGAGGAAGAGAAAAGGGGAAAGTGGGTCTCCTTCTCGAAGGCCTTGATACTTGAATTCTGCCTTGTGGTCTTCCATTTATAAAGATTGAATATTTGGGGTCGCGCACGCAACCCATTATCCATCTGCCATAAAAAATTTTCTGCACCATTACTTTTTCTAAAAAGTCCCAATCGACCCCATCAAAGGTTTTTTCAAGGTCCAACTTAAACAACCACCCCCTTCTTCTTTTTGCTTGGTATTCTTCCACTACTTTGTTGGCAATGAGAATGGGATCGTTGATCTGCCTTCCTTATAAGAAAGCACTTTGAGGAGGCTCAATAATGCTTGACATGATCTTCTTAAGTCTTTCAGCCAATACTTTCGCCACCAGCTTGCAAGTCAAAATAGTAAGACTTATTGGCTTGAAATCTTTCACCTTTGAAGCATCCTCTTTTTCTTGATTAAACAGATGAAGTTTTCCATTACACAAGCATTGAGCTTCCCATTGGCATAGAATTCTTTACAAAGGGAATGGAAATCGCTCTTCAATTCATCCCAAAATTTGATTAAGAATTCTGCTGTGAATCAATCCGGCCCCGGCACTTTACTCCTTCCCAACAATTTCAATGCTGATTTTATTTCTTCTACTAAAAATTATGAGGTCAAGCTTTTATTCTGATAATTGGAAACTACTGCCCAGATTAGGGGTAAAGGAAAGTGGCCAGCTTGTGGAGCTTTTGTGTATTAATCTGTAGAAGTCAAGAATTAACCCTTCAATCTCCACATATGAGGAAGTTGGAACCTGCGACACTCATTGACTAATTTGGAAATCAGATTTCTTCTTTTTTTGACAGCTAGAAACCGATGGAAGAACTTGGTGTTCTCATCCCCTAATTTCATCCAATTTAATTTACTTTTCTGAACAAGGTCTATTTCCTCCCTTCCATATATAGCTCCAGAAGGTCAACATTCAGCATCCATTTTAGGTTCTTCATCTGCTCATCCTTAACTTCTTCATTTGCTAAAGCTTTCAGCAAGCTTTCTTCGTTATATTTTCTGGCTTTTTCACTGTCACTGTTCCAATTTTCAGCTGAATTTTTAGGGGTCGAAGTTTGGATGCTATAACAAAGCCTGACCATCCTTGGTGACTTCCAGAAGCCAAGGAGTTCTCAATGAGCCTGCCACACTGTTTGTCGAATAACCATCTATTACATAAACGAAAAGGGGAAGGCCCCCAACTAGAAGCCCCTGCCTCTAATAATATGGAGAAGTGATCCGAGCATGATTGAGCTTGCCATGTAACTCTAGTATCTGCAAACAGATCTTCCCATTCGGAATTATTTACGAATCTGTCTAGCAAGGATCTGGAAATTATGTTGCCTTCTCGCAGAGTAATTCGTTATTTCCATTGTGGAAGACATGAATCCACATATATTTTCCTTGACTTTTGTCCTTGCTTCAGCCAATGGTTACTAGATTATTTCTTCTCAGATGATACGTTAGTCAAGTGCGTTGAGATCTTTTCAGATATTAACCCTCTGGGGAAATGGTCAGTATATGGCAATTTACATTCAAAAGTAGAGCATTGGTCTGATACTATTCACTCTCATCAAATGTTATTCTGAGGTATGGAGGATGGATTAGTATTAAAAATTTGCCAATAAAGTGCTGGAAACATGCTGTCTTTGAAGCCAGTGGACAGAACCTGGGAGCCATTGGAGGTAGATTAGTATTTGGTCATCTAACACAATTGTTTGGATTGCTCTGCTGCTGTCATTCAAACAGAAAAGAACTTTGGCTTCCTTTCAGCTGAATTGTTATCAAGGATGCAAAGCCTGGGAATTTTTCCTACGTTATGTAGTGCGTTGTAGAGAATGGGCAAAAAATCAATTACACAGCATCTTGTAGTGGGGCGGCTGCATAATTTTTATCGTTTCTAACATCCACGTATTTAGCCACCATTGAGTTGAAAGTTCTTTTTTACTTGAATAAATCCAGGATGGTTAAATAATTTATGTTGGTAGCTGCTGTATAATAATATATATATATGTACATATCTGCGTTTTCTTGTGACAAATTAGAAATAAGATGTCTAATTAATGGTGTTGCATTTGAACAATGAATTGCACAGATTCAGAAGAAGAAAATATGGGAAATGGTCCAGCCTCATCTAAAGACAGATGGTTGTTGCACTGCTGTTTTGGGTTCCCATCCAATGAGGACTTCCGCTGGTGTTGTCACCTCCACTTCCCTTAAACATGCAAACATCTCTTGACTCTATCACCACCTCCCTCACGGCTTACATTGGCACTTGTTTTTTTCTCTAAATTTTTGTTCTATTTTGATATCTGGAACACAAACACGACAAGAATACATTTTCATATAAAAGAAGGAATGAATGTACAGTACCTTGCAATTTGTAATGCATATTTGTAGGGTTGCAGTGCTCATGAAGCTTCCTTAGTTAGGGCTATGTTTCAACAAACACTTTCCATTTAAATTCAGCATTTTTGGTAGTGATTTAAAAAGTGACAATGCCCTAGAATCATCTAAAGTTGTTTGTGACAAAGCACTTGCTTTCTGCCCTT

Coding sequence (CDS)

ATGGCTTCTCTCCCAACTGCCGCTGTTATTGCCAATGTTGCAAAAACTGCCACCAATGCTCGCTTTTTCTTCTTCTTCTCTTCTTCTCTTTCCCATAACTTCGACCATTATCTCCCCTCCTTCGCTCCACCTCGAACTTTTTCTCGTTTCACTCCACCCCTTCGTACGGATAATGTCGCCGGAAGAATCTCCAGAAATGGTACACAGTTTCCGTTCTCATTTTGCACTACTGCGTCCACTGAGCCGGTCACCAGTGACGCCTCCATTGCATCGTCGTCCACATCATTGGATAAGGACGAAGATGATCCGGAAAAGAATATTAAGGATGCGGCTGACATGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCTGGAGGCTGACACTCTTTATGTTGAAGAAGTTGATGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTCGATCAACTTCTGGATGAGATACCAAATCCCAAGTACCATTATATGGAGTCAATAGACGTAATAAAAGCATATATGATGGGAGACGACCGGTGA

Protein sequence

MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVAGRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDEIPNPKYHYMESIDVIKAYMMGDDR

Homology

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy Swiss-Prot
Match: Q5ZJ08 (Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 GN=YARS1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.1e-12
Identity = 29/52 (55.77%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 114 LDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDEI 166
           LDIRVG+++   +H +AD+LYVE++DVGEPEPR + SGLV+++P +QL D +
Sbjct: 367 LDIRVGKVVSVEKHPDADSLYVEKIDVGEPEPRTVVSGLVQFVPKEQLQDRL 418

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy Swiss-Prot
Match: Q20970 (Methionine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=mars-1 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 107 IKDAADM--LDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE 166
           + D  D+  LD+RVGRIIK  +H +AD LYVE++DVGE  PR + SGLV+++PLDQ+ + 
Sbjct: 751 VDDTIDVGRLDMRVGRIIKCEKHPDADALYVEQIDVGESAPRTVVSGLVRHVPLDQMQNR 810

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy Swiss-Prot
Match: Q6DIJ1 (Tyrosine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=yars1 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-11
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 113 MLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLL 163
           +LD+RVG+I+   +H +AD+LYVE VDVGE  PR + SGLV+Y+P DQLL
Sbjct: 367 LLDLRVGKILSVRQHPDADSLYVESVDVGEENPRCVVSGLVQYVPSDQLL 416

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy Swiss-Prot
Match: O54873 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetulus griseus OX=10029 GN=AIMP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.8e-11
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 97  DKDEDDPEKNIKDAA----------DMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPR 156
           DK  +  EK ++ AA            LD+R+GRI+   +H +AD+LYVEEVDVGE  PR
Sbjct: 175 DKKGEKKEKKLQSAAPSADSKPVDVSRLDLRIGRIVTVKKHPDADSLYVEEVDVGEAAPR 234

Query: 157 LICSGLVKYIPLDQL 162
            + SGLV ++PLDQ+
Sbjct: 235 TVISGLVNHVPLDQM 249

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy Swiss-Prot
Match: Q9ZTS1 (Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0508700 PE=2 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 8.9e-11
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 114 LDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQL 162
           LDIRVG I KA +H +AD+LYVEE+DVGE  PR + SGLVK+IPL+++
Sbjct: 643 LDIRVGLIRKAQKHPDADSLYVEEIDVGEEAPRTVVSGLVKFIPLEEM 690

[Close]

BLAST of Cucsat.G7950.T9 vs. NCBI nr
Match: XP_031740244.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucumis sativus] >KAE8649689.1 hypothetical protein Csa_012325 [Cucumis sativus])

HSP 1 Score: 317 bits (813), Expect = 1.54e-107
Identity = 167/191 (87.43%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGTQFPFSFCTTASTEPVTSDASIA SSTSLDKD+DDPEKNIKDAADMLDIRVGR
Sbjct: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. NCBI nr
Match: XP_004144343.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 317 bits (813), Expect = 6.94e-107
Identity = 167/191 (87.43%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGTQFPFSFCTTASTEPVTSDASIA SSTSLDKD+DDPEKNIKDAADMLDIRVGR
Sbjct: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. NCBI nr
Match: XP_016900725.1 (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 295 bits (756), Expect = 7.06e-99
Identity = 157/191 (82.20%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIASSSTS+DK +DDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. NCBI nr
Match: KAA0062469.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucumis melo var. makuwa] >TYK27413.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 295 bits (756), Expect = 7.31e-99
Identity = 157/191 (82.20%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIASSSTS+DK +DDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. NCBI nr
Match: XP_008449535.1 (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 295 bits (756), Expect = 3.23e-98
Identity = 157/191 (82.20%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIASSSTS+DK +DDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy TrEMBL
Match: A0A0A0L299 (tRNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G438550 PE=4 SV=1)

HSP 1 Score: 317 bits (813), Expect = 3.36e-107
Identity = 167/191 (87.43%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGTQFPFSFCTTASTEPVTSDASIA SSTSLDKD+DDPEKNIKDAADMLDIRVGR
Sbjct: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy TrEMBL
Match: A0A1S4DYD2 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491385 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 3.42e-99
Identity = 157/191 (82.20%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIASSSTS+DK +DDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy TrEMBL
Match: A0A5A7V9V7 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001020 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 3.54e-99
Identity = 157/191 (82.20%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIASSSTS+DK +DDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy TrEMBL
Match: A0A1S3BN57 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491385 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 1.56e-98
Identity = 157/191 (82.20%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDEDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIASSSTS+DK +DDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE----IPNPKYHYMESI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLD     + N K   M  I
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 DVIKAYMMGDD 187
                 M   D
Sbjct: 181 KSCGMLMAASD 191

[Close]

BLAST of Cucsat.G7950.T9 vs. ExPASy TrEMBL
Match: A0A6J1HP94 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111466069 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 7.41e-76
Identity = 139/204 (68.14%), Postives = 145/204 (71.08%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFF---FSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTD 60
           MASLPTAA IANV KTATN R  FF   FSSSL H FDH  P FA  RTF  FTPPL  D
Sbjct: 3   MASLPTAAAIANVTKTATNGRLLFFSSSFSSSLPHKFDHSRPFFALRRTFPCFTPPLHKD 62

Query: 61  NVA------GRISRNGTQFPFSFCTTASTEPVTSDASIASSSTSLDKDE----DDPEKNI 120
            VA      GRISRNG +FPFSFCT +STEP TS A IASSS+S DKD+    DDPEK I
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTASSTEPATSGAPIASSSSSSDKDDGNDNDDPEKKI 122

Query: 121 KDAADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDE--- 180
           KDAADMLDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLLD    
Sbjct: 123 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 -IPNPKYHYMESIDVIKAYMMGDD 187
            + N K   M  I      M   D
Sbjct: 183 VLANLKPRNMRGIKSSGMLMAASD 206

The following BLAST results are available for this feature:

BLAST of Cucsat.G7950.T9 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZJ08	6.1e-12	55.77	Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 GN=YARS1 PE=2 SV=1	[more]
Q20970	1.8e-11	52.46	Methionine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=mars-1...	[more]
Q6DIJ1	5.2e-11	60.00	Tyrosine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=yars1 PE=2 S...	[more]
O54873	6.8e-11	46.67	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetu...	[more]
Q9ZTS1	8.9e-11	64.58	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]

BLAST of Cucsat.G7950.T9 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740244.1	1.54e-107	87.43	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]
XP_004144343.1	6.94e-107	87.43	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
XP_016900725.1	7.06e-99	82.20	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
KAA0062469.1	7.31e-99	82.20	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]
XP_008449535.1	3.23e-98	82.20	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]

BLAST of Cucsat.G7950.T9 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L299	3.36e-107	87.43	tRNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G43855...	[more]
A0A1S4DYD2	3.42e-99	82.20	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]
A0A5A7V9V7	3.54e-99	82.20	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]
A0A1S3BN57	1.56e-98	82.20	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
A0A6J1HP94	7.41e-76	68.14	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbi...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 116..164 e-value: 1.5E-9 score: 37.8
IPR002547	tRNA-binding domain	PROSITE	PS50886	TRBD	coord: 110..188 score: 14.206781
None	No IPR available	GENE3D	2.40.50.140		coord: 111..167 e-value: 4.3E-16 score: 61.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..104
None	No IPR available	PANTHER	PTHR11586	TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER	coord: 93..163
None	No IPR available	PANTHER	PTHR11586:SF39	TYROSINE--TRNA LIGASE, CYTOPLASMIC	coord: 93..163
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 112..163

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G7950	Cucsat.G7950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7950.T9.E1	Cucsat.G7950.T9.E1	exon
Cucsat.G7950.T9.E2	Cucsat.G7950.T9.E2	exon
Cucsat.G7950.T9.E3	Cucsat.G7950.T9.E3	exon
Cucsat.G7950.T9.E4	Cucsat.G7950.T9.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7950.T9.C2	Cucsat.G7950.T9.C2	CDS
Cucsat.G7950.T9.C1	Cucsat.G7950.T9.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7950.T9	Cucsat.G7950.T9-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0000049	tRNA binding