Cucsat.G7887.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGGAAATGGAAAACGAAAGAAAGGGAAGTTAGTTAGAAACGAAGCGAAACAAAGAAGAAAAGAAAGAAACAACAAAACTCCAAGTTCTCTCCTAATTATTCCATTCTTTTTCGCCGCGGAATTTGTTGCATTTCCGGTGGTGCTTCTGGCGGCGGCGGTGGTGGTGGTGGCGGTATCGGTAGCAGTAGCGGCAGCGGCAGCGGGGACTTTCGTGGTGGCTTTGAGAGTCGTTTTGTGATTGTTCTGCAACTACGTCGACGATCACAATTCGAAACAACAACAAGAAGAAAGAAGACACACAGCTTTCAACAATAACAATAACAACAACAACACACACACACAGTTTCAATTTCAATCATGGCGTATAGGAGGAGACAAGCAATCACCAGAGCTTCTACTTTCAAAGAAGAGATCCATTATCCTTCTGACGAACTTGATCACAATTCCATCTCTTCTTCCTCCTCTTCCTCTTCTTCTCTTGCTGCTCAAGCGATCCGAGCTTCTGCTACTCAACGTGATTCTTCTCATTCCTCTGCCTTTGCCGGTGCTTCCTCCAATTTTTCCCCTGGCCATCTGCGATCCAAGGTAGTTTTATTTCTTTTCTTTTTCCTTTTTTTCACTCTTCAATCTTGAATGGATCATCCCTGTTTGATTCACTTGGATCGTGATAAGAAATAAGGAATATCCGTCAAATCTCAGATTTGATTCTGTTTATTGCTATGTCTTCATCGTTCACGATCAATATGATTTGAATTTTCCCGATGAACTGATCGAGTTACATTTTGATCTTAGAGTTTAATTTTGCCATGATCTCCTCGGTTTTGGCAATTGTTATGAATTCTATACGTCAATTTTGATTTTGTTGAGGATTTCGGACGCCTTTTTCTTTTTTATTTATTCATCTTAATCTATCGGAAGAATGATTGCATCTGTTGATGATTCATTTTCGTCTTTGAATTCTTCAGCAAGCTCTGTTGTTTTTGTTGGTCATTCAAATATGCCTTTTAGTATAGCTCCCAAGGAATATGTATCTGATCCTATACCTCTATTTTCTAGAGTTTTGCTGGTGAGAATATATTCAAAAGTGATTCAAAATCCGGGTTTTGGGGTGTACTGGCTCGGAAAGCTAAGGCCATTCTTGAAGAGGATGACATAGCCATAGAAGATGAACCAAGTAGGTTCCAGCCCATTAATAACTCAAACCGTAGCCAGGTGAGAGCATTTTGCCTATCTGGTGGTGTTACTTTTTTCGAGTTATATTGCAGGGGTGGAGAATTGAGTCATTGTCAACCTTATCGATGACAATCTGACATCCTATCCACCTTGCTATGCCTGGAACTGGGTATCGGGAGTCAATATATTATATAGATATAGGCACAATTTATTGTGATTATGATTATCTATGTTAATATAGGCACAATATATTCTACTGATTTTCTTATGAAATGGTTGTAGGAGCCATGTCAGTCAACAAATTGCGACTCAAAGAAAACGGACAATCCGGCAATACGGAAGGGTTTGGATGCAATCTCAACTTCGCTTAATCAACTTGGGGACACATTTGAAAAGGCATATGAGGTAAGAAAAGATCAGTGGCTTCACTTCTCATAGCTTAATACGAAAAGCTTACTAAATCTAAAAGCTTTAACAGCATCATTTAGAGCAGATAGTTTTGGTCTTACCATTTTCCAACAGTTTTTCATGAGCCTGATTTAGAAATCAAAAACTCCATTGAAGGAAATCTTTAACTTGGCTTCTTAGTGAACAGATGGTTTTGATCTTACCATTTTCAACACCTCGTTTTGTTTTCAGGAAGGTCGCACAATTGTGGAAAATAAGACTGCAGACATAATTCAAGAAACTCGCAAACTGCAGATTAGGAAAAAGGGCAATAATACTGAAGGGTTATACCCTGCTGTGAATAATCAATGGCAGCAACCGAATATACAGTCTCCAGAACCAAATATGCAAACACATCATGAAACTCAACTGAAGGCATCTCGAGACGTAAGGTGCCAACTTTGTAATCATGTATCGTAATGCTACTATTGAATTTTTCGCCTCCCTTCTCTCACGAATTAAAGTCTATGATTATTGCATTTGGCAGCACATTTTAGAGTAATAATTAAATGTGTAGCAACATTTTTTAAGAATTGCAATTTGCAAAATCAATCATTGATAGATTGGTTGATAGACACTCCTACCATAAAGAGGCTTCAAAAGCAGAATCTAAAATTTCCTAATTCTCTTGGCATAATTGTTATTTTTGCAACTGCCTCTAAAGTCCTTGGTTAGAATTGAATCATTATCTTAGCTAAGATCACATTGACAAAGTGGTCTGGCTTACATGTCTATTCTTCACAGCTTAATACGAAGTTTTCTAACCATGCAAAAAGGAATTCAAAAGGTCAATGCATCAATGTCTGTCCAGTTGAAACTGTTTCCTAAGCTTGAGTCTTTCAATGTGTAATGTCGTCAATTGAATTTTGGTGGTTAATTTTTTACTCATACATGCTCGAATTTTTGTTAGAAGAAAACAGAGCTTACTTTTGGTGGTAACAAAGAGTAAGAATTACCTGTGTGTGTACTGCAGGTGGCGATGGCAACAGCTGCCAAAGCCAAACTGTTACTTCGGGAGCTGAAAACCATTAAAGCAGATCTGGCTTTCGCTAAAGAAAGATGTGCACAACTAGAGGAAGAAAACAAAATTCTCAGGGAAAACCGGGAGAAGGGAGATAATCGTGCAGATGATGATTTGGTATATACATTTTTACTTTCCTCTTTCAGTTCCTCCCAGGATCGTTAACTCTAAAACATCAATTTAGAAACATGGATGGTAACCGTGCTAACGTTCCTTTAAAGATTTTCCCAATGTTATAGAGAAAGTCCAAATCTGTAATTGAACCGAGATTTTAACTGTTTCGAAACATTGTCTTGTTTTGTAAATTCAGATTCGGCTTCAACTAGAGACTCTTTTGGCTGAGAAAGCACGTTTGGCGCATGAGAATTCAATATATGCCAGGGAGAACCGTTTCTTGAGGGAAATTGTGGAGTACCATCAACTGACAATGCAAGATGTGGTTTATTTAGATGAAGGAATGGAAGAAGTTACAGAAGTTTATCCCATATCCACCTCTCCAGAGATCACCAAAATGCTTTCTAATTCTGTTTCCCCACGCTCCCCAACCTCACCTTCTTCACCCATGGAAGTTCTTCCTGTTGTTCCTCCTCCTCCTCCTATTCAATCTAAACAAGATAAGGATCATCATGACAAAGACAGTGATGAACACCCAACTTCCAGTACTACATTTTCTGAGGAAGAAGAAGAAGAAGAAGAAGAAGGTACTAAAAAAAACCCATTGCCTTCTAGTACTTCTTCTTCCTAAGGAATTTGATTTTTCTGTTCAAGCTGAAAAAGAAAACTGTGGAAAAGGGGGGGAAAATTTGTTATTTTTTATTGCATTATTTATATTCTTTGTTCTTTGATGTGTGAGGGAGTGAAATTACAGAAGAATTGCGTGGGAGGGGAGGGCAAAGAAGGCAGAGTTTGGTGGTTTGATTTGATTCTTTTTTTCATTTATTGACCATATTTTTTTGGGTACTAAATTAACAAAGTGAGAATTGTAGATTATGGCAATGCCCAGGTGAAAAATGTTCCAAAATAATAAAATATTCATTCATTTTGCTTTT ATGCAAACACATCATGAAACTCAACTGAAGGCATCTCGAGACGTGGCGATGGCAACAGCTGCCAAAGCCAAACTGTTACTTCGGGAGCTGAAAACCATTAAAGCAGATCTGGCTTTCGCTAAAGAAAGATGTGCACAACTAGAGGAAGAAAACAAAATTCTCAGGGAAAACCGGGAGAAGGGAGATAATCGTGCAGATGATGATTTGATTCGGCTTCAACTAGAGACTCTTTTGGCTGAGAAAGCACGTTTGGCGCATGAGAATTCAATATATGCCAGGGAGAACCGTTTCTTGAGGGAAATTGTGGAGTACCATCAACTGACAATGCAAGATGTGGTTTATTTAGATGAAGGAATGGAAGAAGTTACAGAAGTTTATCCCATATCCACCTCTCCAGAGATCACCAAAATGCTTTCTAATTCTGTTTCCCCACGCTCCCCAACCTCACCTTCTTCACCCATGGAAGTTCTTCCTGTTGTTCCTCCTCCTCCTCCTATTCAATCTAAACAAGATAAGGATCATCATGACAAAGACAGTGATGAACACCCAACTTCCAGTACTACATTTTCTGAGGAAGAAGAAGAAGAAGAAGAAGAAGGTACTAAAAAAAACCCATTGCCTTCTAGTACTTCTTCTTCCTAA MQTHHETQLKASRDVAMATAAKAKLLLRELKTIKADLAFAKERCAQLEEENKILRENREKGDNRADDDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDVVYLDEGMEEVTEVYPISTSPEITKMLSNSVSPRSPTSPSSPMEVLPVVPPPPPIQSKQDKDHHDKDSDEHPTSSTTFSEEEEEEEEEGTKKNPLPSSTSSS Homology
BLAST of Cucsat.G7887.T2 vs. NCBI nr
Match: XP_011653736.2 (uncharacterized protein LOC101205031 isoform X2 [Cucumis sativus]) HSP 1 Score: 391 bits (1005), Expect = 4.01e-134 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. NCBI nr
Match: XP_011653735.2 (uncharacterized protein LOC101205031 isoform X1 [Cucumis sativus] >KAE8649597.1 hypothetical protein Csa_012760 [Cucumis sativus]) HSP 1 Score: 391 bits (1005), Expect = 2.28e-133 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. NCBI nr
Match: XP_008463300.1 (PREDICTED: uncharacterized protein LOC103501490 isoform X2 [Cucumis melo]) HSP 1 Score: 375 bits (963), Expect = 9.35e-128 Identity = 207/213 (97.18%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. NCBI nr
Match: XP_008463299.1 (PREDICTED: uncharacterized protein LOC103501490 isoform X1 [Cucumis melo] >TYK06210.1 actin cytoskeleton-regulatory complex protein pan1 [Cucumis melo var. makuwa]) HSP 1 Score: 375 bits (963), Expect = 5.21e-127 Identity = 207/213 (97.18%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. NCBI nr
Match: XP_038882986.1 (uncharacterized protein LOC120074073 [Benincasa hispida] >XP_038883017.1 uncharacterized protein LOC120074094 [Benincasa hispida]) HSP 1 Score: 320 bits (819), Expect = 3.44e-105 Identity = 187/218 (85.78%), Postives = 193/218 (88.53%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. ExPASy TrEMBL
Match: A0A0A0KXX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337320 PE=4 SV=1) HSP 1 Score: 389 bits (1000), Expect = 6.33e-133 Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. ExPASy TrEMBL
Match: A0A1S3CKH3 (uncharacterized protein LOC103501490 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501490 PE=4 SV=1) HSP 1 Score: 375 bits (963), Expect = 4.52e-128 Identity = 207/213 (97.18%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. ExPASy TrEMBL
Match: A0A5D3C4F3 (Actin cytoskeleton-regulatory complex protein pan1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00700 PE=4 SV=1) HSP 1 Score: 375 bits (963), Expect = 2.52e-127 Identity = 207/213 (97.18%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. ExPASy TrEMBL
Match: A0A1S3CJA7 (uncharacterized protein LOC103501490 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501490 PE=4 SV=1) HSP 1 Score: 375 bits (963), Expect = 2.52e-127 Identity = 207/213 (97.18%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of Cucsat.G7887.T2 vs. ExPASy TrEMBL
Match: A0A6J1IM16 (uncharacterized protein LOC111478244 OS=Cucurbita maxima OX=3661 GN=LOC111478244 PE=4 SV=1) HSP 1 Score: 288 bits (736), Expect = 5.84e-93 Identity = 171/216 (79.17%), Postives = 178/216 (82.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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