Cucsat.G7610.T4 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G7610.T4
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptioncalmodulin-binding protein 60 B-like isoform X1
Locationctg1528: 5310991 .. 5313153 (+)
RNA-Seq ExpressionCucsat.G7610.T4
SyntenyCucsat.G7610.T4
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCTCCTCCCTTTGATCATCTTCAAGGTCCACCCAACATAATCTGCGGCCTCTCTTTTCCTTATGGGTACAGTCTGATCTCTCTTTAATTTCATTCTTTTGGACTATAATGTATGGATCTAAGCCTAATTTATTGTTTTCTCTCCTTCTATTTTCACAGCTCTGGAGTTGGAGCTGAGGTTTCAATTCCTCGATCCTGGGCTCATCTTGAAAATTTTCTTCGTGGGGTGGTATGCATGTTATGCCTAATTATTTCAAACTTTTTGTTAATTATTAAGCTCATGTGTGTATGGTAAATTTAATTTCAGATACGGGAGGAGGTGGAGGCAAAGGTTGAAGCTCACTTTTTTAGGGTCAAAGAAGGAAAAGAAGGCAGTGGTGATGGTGGTGGATCTGGGGGAACAAATGAGAATTTGAGGCTACGTTTCAGGAGCAAGATTCCATCCATCGTCTACACTGCAAATAACATCGAAGCCAAGAATGGGGAGGAGCTGGGTGTTGAATTATTTGATGTTGTTAATGATCGCATCATTGACGTTACTCATCCATTGTCGTCGGCGTCGATTGAGGTTGTTGTCCTTGACGGAGAATTCAACGACGGGGAAGCAATAACTCAATCGGATTTCAACAGAAGTATTGTGCCACAAAGGCTGGGAGAACGACTTTTGTTGATTGGTGATGATAAGAGTTTTCGTTTAGAAAATGGTGTTTATTCCATCACCAATTTGTCATTCACTACAAACTCAAGCAGGAGCAGAACCAAGAAGATTTGTTTGGGATTGAGGGTTAAACATGACTCCATCAACAACTATCCTACAGTCGGATACGCCGTGTCCAATCCTTTTAGAGTGAAGGATCACCGAGGCCAACGTACGTATCTTGAGTCGTCATTCTGCTAGAGCTGAGCTGCATCCATCTTTTCATTTTTATTTACAATATCCTAATTATTTTTTTATATGTACATCTAACAGCGAACAAGAAACACCATCCTCCGGGAGGAGAAGATGAAGTATGGAGATTGGAAGGGATCGCGCGAAATGGCGAATATCACAAGCGTCTAACTTCCCATGGTATAATAAATGTGGATGCTTTTGTGAAGGCTCATCAAAATGACTCTCGTTCTCTAAGAAAGGTATAATATACACACATATATATACATATACATATATATAGAATAATTGTGATATTAATTTGGGGTAATTTTGATGCACAGTGGTTAGGGAATAGACTTTCAGACAGACAATGGAAGACAATGGTAAAGCAAGCTCTTCAATATGTTCCTATCACCATCCCCACTTTTGATCCACCAAACTTACAGGTATTTTCTGTTATGCAATAAACTCATCGTTCTTCCTTCAAATTCATGATAATTATTTTGATAATATTATATGTAAAAAATAAAGCAGGAAAATTTGGAGCTGCAAAATGAAGCCATGGATCAAAATGCATCTGTTTTCAACCAAAACAATATTGGTGCAAGTAATGGAAATTATGAGTTCCAAAATCAAACATTGTTGGGCAATTTTCACGACTTTTCCTTTAATCATCTCACATCTGAAGGTATATTTTTCCCTCCTTTTATTTTAATTGATCATCATAAAAAAAAAAAATCAATATCTCTTGAAATTATTATAATTTACTTGATGTCTATATCATTATTAAAAATGAAAACCATATAATAATATTGTGTAATAATATTGTGTTTCTTTTTATTAATTCTGTAGATCATTATAATTACACAATACAAACATTGTTGTCACCTGGAGAAGCTTCAACCTCAAATGCCCAAAACATAAACAATTATGATGAAAATACAAGTACATGTAACCCATACTTCCAAGGAACTTGGAACAAGTTGGTCCCCAAACCCAAATGATTCAAAATAATAATACTGCTCTTAAAATCAAACTAAGATACATATGAACCAATAACGTCATATCTTGACTTTGGAATGTGATGAATTGTGCTACATTTGAGTCAACATAGTTGAGATATTTAAGTGTACCGACGGGTCCCTTCTTCCAATGTAAACAAGTTTGTAAGATATAGATCAAGTCTATAACGTTTGTTTTTAGTTTGGGATATGACGAAGGTGTTATAGATGTGTCGACTTAGTTACGTTGAGATATTTTAGTAGTCCTACCGATCCCTTTTATGTTTCT

Coding sequence (CDS)

ATGGTAAAGCAAGCTCTTCAATATGTTCCTATCACCATCCCCACTTTTGATCCACCAAACTTACAGGAAAATTTGGAGCTGCAAAATGAAGCCATGGATCAAAATGCATCTGTTTTCAACCAAAACAATATTGGTGCAAGTAATGGAAATTATGAGTTCCAAAATCAAACATTGTTGGGCAATTTTCACGACTTTTCCTTTAATCATCTCACATCTGAAGATCATTATAATTACACAATACAAACATTGTTGTCACCTGGAGAAGCTTCAACCTCAAATGCCCAAAACATAAACAATTATGATGAAAATACAAGTACATGTAACCCATACTTCCAAGGAACTTGGAACAAGTTGGTCCCCAAACCCAAATGA

Protein sequence

MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLLGNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLVPKPK
Homology
[Close]
BLAST of Cucsat.G7610.T4 vs. NCBI nr
Match: XP_011659631.1 (calmodulin-binding protein 60 C isoform X2 [Cucumis sativus] >KAE8653350.1 hypothetical protein Csa_007323 [Cucumis sativus])

HSP 1 Score: 251 bits (642), Expect = 4.55e-80
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLLG 60
           MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLLG
Sbjct: 307 MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLLG 366

Query: 61  NFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLVP 120
           NFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLV 
Sbjct: 367 NFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLVL 426

Query: 121 KPK 123
           KPK
Sbjct: 427 KPK 429

[Close]
BLAST of Cucsat.G7610.T4 vs. NCBI nr
Match: XP_011659625.1 (calmodulin-binding protein 60 C isoform X1 [Cucumis sativus])

HSP 1 Score: 247 bits (630), Expect = 3.01e-78
Identity = 122/124 (98.39%), Postives = 122/124 (98.39%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQ-ENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLL 60
           MVKQALQYVPITIPTFDPPNLQ ENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLL
Sbjct: 307 MVKQALQYVPITIPTFDPPNLQQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLL 366

Query: 61  GNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLV 120
           GNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLV
Sbjct: 367 GNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLV 426

Query: 121 PKPK 123
            KPK
Sbjct: 427 LKPK 430

[Close]
BLAST of Cucsat.G7610.T4 vs. NCBI nr
Match: XP_008450562.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo])

HSP 1 Score: 197 bits (501), Expect = 1.77e-58
Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNA-SVFNQNNIGASNGNYEFQNQTLL 60
           MVKQALQYVPITIPTFD P LQENLELQNEAMDQN  +VFNQN IGA NGNYEFQ QTLL
Sbjct: 351 MVKQALQYVPITIPTFDRPYLQENLELQNEAMDQNEKAVFNQN-IGAINGNYEFQEQTLL 410

Query: 61  GNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLV 120
           GNFH F   + T EDHYN+TI TLLSPGEASTS AQNINNYDENTSTCN YFQGTWNKLV
Sbjct: 411 GNFHFFC--NPTFEDHYNHTIPTLLSPGEASTSYAQNINNYDENTSTCNQYFQGTWNKLV 470

Query: 121 PKPK 123
           PKPK
Sbjct: 471 PKPK 471

[Close]
BLAST of Cucsat.G7610.T4 vs. NCBI nr
Match: XP_008450563.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X3 [Cucumis melo])

HSP 1 Score: 192 bits (489), Expect = 1.08e-56
Identity = 105/125 (84.00%), Postives = 108/125 (86.40%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQ-ENLELQNEAMDQNA-SVFNQNNIGASNGNYEFQNQTL 60
           MVKQALQYVPITIPTFD P LQ ENLELQNEAMDQN  +VFNQN IGA NGNYEFQ QTL
Sbjct: 350 MVKQALQYVPITIPTFDRPYLQQENLELQNEAMDQNEKAVFNQN-IGAINGNYEFQEQTL 409

Query: 61  LGNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKL 120
           LGNFH F   + T EDHYN+TI TLLSPGEASTS AQNINNYDENTSTCN YFQGTWNKL
Sbjct: 410 LGNFHFFC--NPTFEDHYNHTIPTLLSPGEASTSYAQNINNYDENTSTCNQYFQGTWNKL 469

Query: 121 VPKPK 123
           VPKPK
Sbjct: 470 VPKPK 471

[Close]
BLAST of Cucsat.G7610.T4 vs. NCBI nr
Match: XP_008450560.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo])

HSP 1 Score: 192 bits (489), Expect = 1.10e-56
Identity = 105/125 (84.00%), Postives = 108/125 (86.40%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQ-ENLELQNEAMDQNA-SVFNQNNIGASNGNYEFQNQTL 60
           MVKQALQYVPITIPTFD P LQ ENLELQNEAMDQN  +VFNQN IGA NGNYEFQ QTL
Sbjct: 351 MVKQALQYVPITIPTFDRPYLQQENLELQNEAMDQNEKAVFNQN-IGAINGNYEFQEQTL 410

Query: 61  LGNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKL 120
           LGNFH F   + T EDHYN+TI TLLSPGEASTS AQNINNYDENTSTCN YFQGTWNKL
Sbjct: 411 LGNFHFFC--NPTFEDHYNHTIPTLLSPGEASTSYAQNINNYDENTSTCNQYFQGTWNKL 470

Query: 121 VPKPK 123
           VPKPK
Sbjct: 471 VPKPK 472

[Close]
BLAST of Cucsat.G7610.T4 vs. ExPASy TrEMBL
Match: A0A0A0LYD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568480 PE=4 SV=1)

HSP 1 Score: 251 bits (642), Expect = 1.51e-82
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLLG 60
           MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLLG
Sbjct: 142 MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNASVFNQNNIGASNGNYEFQNQTLLG 201

Query: 61  NFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLVP 120
           NFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLV 
Sbjct: 202 NFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLVL 261

Query: 121 KPK 123
           KPK
Sbjct: 262 KPK 264

[Close]
BLAST of Cucsat.G7610.T4 vs. ExPASy TrEMBL
Match: A0A1S3BPI6 (calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 8.58e-59
Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQENLELQNEAMDQNA-SVFNQNNIGASNGNYEFQNQTLL 60
           MVKQALQYVPITIPTFD P LQENLELQNEAMDQN  +VFNQN IGA NGNYEFQ QTLL
Sbjct: 351 MVKQALQYVPITIPTFDRPYLQENLELQNEAMDQNEKAVFNQN-IGAINGNYEFQEQTLL 410

Query: 61  GNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKLV 120
           GNFH F   + T EDHYN+TI TLLSPGEASTS AQNINNYDENTSTCN YFQGTWNKLV
Sbjct: 411 GNFHFFC--NPTFEDHYNHTIPTLLSPGEASTSYAQNINNYDENTSTCNQYFQGTWNKLV 470

Query: 121 PKPK 123
           PKPK
Sbjct: 471 PKPK 471

[Close]
BLAST of Cucsat.G7610.T4 vs. ExPASy TrEMBL
Match: A0A1S3BPG1 (calmodulin-binding protein 60 B-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=3 SV=1)

HSP 1 Score: 192 bits (489), Expect = 5.22e-57
Identity = 105/125 (84.00%), Postives = 108/125 (86.40%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQ-ENLELQNEAMDQNA-SVFNQNNIGASNGNYEFQNQTL 60
           MVKQALQYVPITIPTFD P LQ ENLELQNEAMDQN  +VFNQN IGA NGNYEFQ QTL
Sbjct: 350 MVKQALQYVPITIPTFDRPYLQQENLELQNEAMDQNEKAVFNQN-IGAINGNYEFQEQTL 409

Query: 61  LGNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKL 120
           LGNFH F   + T EDHYN+TI TLLSPGEASTS AQNINNYDENTSTCN YFQGTWNKL
Sbjct: 410 LGNFHFFC--NPTFEDHYNHTIPTLLSPGEASTSYAQNINNYDENTSTCNQYFQGTWNKL 469

Query: 121 VPKPK 123
           VPKPK
Sbjct: 470 VPKPK 471

[Close]
BLAST of Cucsat.G7610.T4 vs. ExPASy TrEMBL
Match: A0A1S3BQH7 (calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=3 SV=1)

HSP 1 Score: 192 bits (489), Expect = 5.33e-57
Identity = 105/125 (84.00%), Postives = 108/125 (86.40%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQ-ENLELQNEAMDQNA-SVFNQNNIGASNGNYEFQNQTL 60
           MVKQALQYVPITIPTFD P LQ ENLELQNEAMDQN  +VFNQN IGA NGNYEFQ QTL
Sbjct: 351 MVKQALQYVPITIPTFDRPYLQQENLELQNEAMDQNEKAVFNQN-IGAINGNYEFQEQTL 410

Query: 61  LGNFHDFSFNHLTSEDHYNYTIQTLLSPGEASTSNAQNINNYDENTSTCNPYFQGTWNKL 120
           LGNFH F   + T EDHYN+TI TLLSPGEASTS AQNINNYDENTSTCN YFQGTWNKL
Sbjct: 411 LGNFHFFC--NPTFEDHYNHTIPTLLSPGEASTSYAQNINNYDENTSTCNQYFQGTWNKL 470

Query: 121 VPKPK 123
           VPKPK
Sbjct: 471 VPKPK 472

[Close]
BLAST of Cucsat.G7610.T4 vs. ExPASy TrEMBL
Match: A0A5D3CEA4 (Calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004380 PE=3 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.29e-22
Identity = 57/67 (85.07%), Postives = 58/67 (86.57%), Query Frame = 0 

Query: 1   MVKQALQYVPITIPTFDPPNLQ-ENLELQNEAMDQNA-SVFNQNNIGASNGNYEFQNQTL 60
           MVKQALQYVPITIPTFD P LQ ENLELQNEAMDQN  +VFNQN IGA NGNYEFQ QTL
Sbjct: 312 MVKQALQYVPITIPTFDRPYLQQENLELQNEAMDQNEKAVFNQN-IGAINGNYEFQEQTL 371

Query: 61  LGNFHDF 65
           LGNFH F
Sbjct: 372 LGNFHFF 377

The following BLAST results are available for this feature:
BLAST of Cucsat.G7610.T4 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G7610.T4 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659631.14.55e-8099.19calmodulin-binding protein 60 C isoform X2 [Cucumis sativus] >KAE8653350.1 hypot... [more]
XP_011659625.13.01e-7898.39calmodulin-binding protein 60 C isoform X1 [Cucumis sativus][more]
XP_008450562.11.77e-5884.68PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo][more]
XP_008450563.11.08e-5684.00PREDICTED: calmodulin-binding protein 60 B-like isoform X3 [Cucumis melo][more]
XP_008450560.11.10e-5684.00PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo][more]
BLAST of Cucsat.G7610.T4 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYD91.51e-8299.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568480 PE=4 SV=1[more]
A0A1S3BPI68.58e-5984.68calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BPG15.22e-5784.00calmodulin-binding protein 60 B-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BQH75.33e-5784.00calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3CEA41.29e-2285.07Calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G7610Cucsat.G7610gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7610.T4.E1Cucsat.G7610.T4.E1exon
Cucsat.G7610.T4.E2Cucsat.G7610.T4.E2exon
Cucsat.G7610.T4.E3Cucsat.G7610.T4.E3exon
Cucsat.G7610.T4.E4Cucsat.G7610.T4.E4exon
Cucsat.G7610.T4.E5Cucsat.G7610.T4.E5exon
Cucsat.G7610.T4.E6Cucsat.G7610.T4.E6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7610.T4.C1Cucsat.G7610.T4.C1CDS
Cucsat.G7610.T4.C2Cucsat.G7610.T4.C2CDS
Cucsat.G7610.T4.C3Cucsat.G7610.T4.C3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G7610.T4Cucsat.G7610.T4-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005516 calmodulin binding