Cucsat.G7165.T7 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G7165.T7
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionSNF1-related protein kinase regulatory subunit beta-1
Locationctg1528: 2711351 .. 2715826 (-)
RNA-Seq ExpressionCucsat.G7165.T7
SyntenyCucsat.G7165.T7
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTCAACAAAACGTATTGACCTCGTCGGCGACTAACCTCAGGCGGCGGTGAGATAAAAAAAGAAAGAAAAGAAGATAAGAACATACGGCGGCGTCTCTATCGGGAACAGAGTGGCAATTTCGGTTAATAAGGGGAAGTGGAAGGGTATTTTTGTTGATGTAGAGAGAGAAAGTCGTCTCTCTCATCTCCGCCTGCAGCTGAGTTTTTTTCTGGTGGGTCATATCTATTTCTAAGCTCTCTTTGTCTTCTTCTTCATCTTCCCAAAATCAACAAACCCACGCAAATTCCAAATTTAGGGATTGGGATTTGGAATATTAAAAATTTCCCAATCCAATTATTACTTTTCCAAGTAATTTCTGTTTGAATGTTGATTACTATACGATCCTCCGTCAGGTGGATTTCCGCTTCTTTTTTGATTTAAGTTGATGGGTAATGCCAATGGTAGGGAGCAGAGTACTCCCGGAGCACCACCTGCCGGAGGAAGACCTGACGTCGATGAGCAAAGTCCGGCAATTACTTCGGAAACCAGTGAAACTAGTAACGTTGTTTCTTCAGATTCGATGGGAAATACTCCTCCTCAAAGCCCTGGGAAGTTCCGATCCCCGATCTTGTTCGCTCCCCAGGTCAATATTTCGTTCTTTTCCCGCTAATCTTTATCTCTTGTGAACTGGGTTTGTGTCAATTTATGTTCTTTTTGCTTTTCATGCTGATGTTTTTTGGTTGTTCGTGGGATTTGATTCATTCAATGATACGTCGTTTTGTTATTGGGTTTTATTGTTTGGTTGAGGTTGGGTTTCCCGGGGAATTTCTTTACTAAGATCGCTGTATTGCAATGGTTGTAAATGGGGAAAGTTCCAGCCAAGATCCACTTAATTGACTACTTGAACTAATATTGACTTCCAGCAATTTTAAATAATGTTAATTGTTAATTATTATTATTTATTTTTACTTTTGATCATTTTCTTAATGCTGTGCTCTTTGGATATGAATGGCTGAAATGTGGAGATGAATGGCTGAAATGTCTGTTGTTGGATTTGACTTCTCTGATCAACTACAGTTTGTATATGAAAAGCTGGGATTTCTCTCTTAATCTCGATCCCCTTTGAACTTTTGATTAATCTATTAGAGTTGTTTGGTTTTTAGAATCAAGTATGTTGTGGAGCTGAGTGTTTCTTCTTTATCGGTTGAAGGACTGATGGCGTACTCATCGATGTAATGGGTGATGAGTAAAAACTTGTAGATCCGGATTTGATCTTACTTAGCAAATATTTTGGCTAGATTGTAAGGTCGAATTTGACTTTCTTGCTGTTTGAGATGAACCCAATGTGAATTTGTATGATGTTTAGCCTTGGTTATGCCTTTTGAAATGATGGTGGGCATGTGTTACAAGACTTGCAGATTCCAGTGGCTCCCTTGCAAGGAGGTAATGGTCCAACCCATTACAGTGGAGCCTGGCAGAACGAATTCGAGGGAGCTGTAGATAGTCCTCCAGAGCAAGGAGTCCCGACAATCATCACATGGAGCTTTGGAGGCAATAATGTTGCCGTTGAGGGGTCTTGGGATAACTGGGCTTCCAGGTTATTTTTTATCCTTCTCCAGGCTGCTATTGTCAATCCGTGATTTGTTCAAGCCTCATGCTTCACGACATTAGATCTACTGCATTTTGCATAAATAATGAAATATTATGCTACATTGGTTCTGCAGGAAAACCCTGCAGAGGACTGGCAAAGATTTTTCGCTACTTATGGTCCTTCCATCTGGAGTATATCATTATAAGTTCATCGTCGATGGTCAACGAAGATATATTCCAGATCTTCCTTTCATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTGTAAGTGTGATTCTTCCCTCCATCTGCATTACCATCCAATCAGCATGAACTTGATCTTGACTCATTGTTTGTATAAAAAATTTATTCGGCTATGTGTAAAAATAGAAACTATCACATAGGTGCAAAAATACTTGCTTGATTCCATGTCGACATATCACTAGAAGGATAAATGCCTGAAGAGATTCCATAGTAGTTCACGGCTTCTCAATTTTATAACTACAACCTTAATAATCCATGATGAATTGTTCAAAAAAGAACCGATCAAAGATTGTTTAAGCTCATTCATTTTCACACTATTGGTATTACTCTCGTATGTTTGATGTAGAGAGATCATAGTTTTAAACCTGGAAAAGGACTAAAGAAAAGAATGAGGATAGCTCTCCACTCCCCAAGTCAGTAAAGTTAGGTAGAAACTCAGAAAGCCAAAACAGCCTTAATGTCTTACGTTATGGCAATATAAATTCTAAAATAAAAGAGGAAAAACTGTGGCAGTGTCACCACTAAAAGAGAAAAAGAGAGAACAAAGGAGAGAAACAGCCGCATGTCTTACAAACCGGTTGGCTGGTCTGAATGATGCCAAAATCTCCTATAACAAATCCTTTTCTTTTCCTTTTTGAACACTTCTGAACACCAACGTAATTAACATAAGATTTTTCTGATAAGGAACGTGATTAAAACAAGTTCTTTGTTTATTTTATTAAAAAAAAGGTTCTTTGTTTATTTAATATCAGAAACGTGATTTACTCAAGTGCTTGAGAGTTTTGTCTTCATCCTCTATGTAGCAACTGTAGACATTCAGAAATTATTTCCTTTATCCTGTCATGCTTTTTGAATGTGTTACTTGTAAATAACTACTCTTGCACCTGTTTGATTCTTTTGGGGAGCTTAGTTTTATCATTTTTGGAGGAAAAGAACAAATTTATATCATCAGGTTGATCAGAAAATTATAGGAGAATTGGGAAAGGTGCCTACACAATAGATTATCCTGGCTCTCTTGTTCTTTCTTTTCAATTTGTGCAATGAGACACGTTCATCATGTTTCACAATTATTTCATCTTCTTGCTTGCCATGAGCGTGTTAAGATACTACCTTCACGATTTATATAATAATAATGAGATAAGAAGGTTTAAGTAGTAGGTATTACAGCATGAGCATTCCCACCGATTCAAGATGGGGATGCTCCCAAGTCTTATACTCGCAACTTAACAAAACAACCAATAACCTGAAATACAACAAAAATTGCTACCTAATCACAAACCCCAACTTATTAGCGGGTGAATTTCCTTTGCCCCTTCTAACATAAACATTGGGTATTTGGAGGGGTCCCATAAAGTGTACATTTTGTCCATTGATTGTTCTATTGAAGTATATTCAAAAGATACAAGGAGAATATCAAAATATGTTGAGTAAAATAGTTATTCATGTGCTCAACCCTAATGAGCATTTGAGCTATTAAGGGATATATCTATATATATATATAGAACATGAGCACACATACACATAACACACGTGCGCATAATAGGATAGGAGGCTGTAGTCTTCTCATTCATGGTTCTGGTGTGCATTTATTGCCTGTGTTCATACTACTGTCCATCACCATAACTTGGTAACTCTCTGGAACAAAAAGAAACCATATACTTTTCCCATGAAATTCTATTGTAATCATTTTGTTATAATTCTGAATGTACACTGAGAATGAGAAGTTTCTTGTCAGCATTGAAGAGAAAGATTCATTACTTCAATTAACTAGTGTAGTGCTGAAGACAAACTGACTTTATGCGTTTCATCTTCACTTTTCATTTTGGAGTTGTTTCCATTCTGTAGGATAGTGTGCCTGATATTCTACAGAGTGTGGCCGAGTTTGAGCCTCCACAATCACCAGAGACAACTTACAGCCAGACATTCCCCACCGAGGAAGACTTCGCCAAGGAGCCAGCAGCCGTACCATCGCAGCTCCACCTCACGGTTCTCGGCATGGAGAACGCAGATGAAGCTTCATCCTCAAAACCTCAACACGTTGTGCTTAACCACCTTTTTATAGAGAAAGGATGGGCTTCTCAGTCTGTGGTTGCTTTGGGACTTACTCATAGGTTCCATTCAAAATATGTCACCGTCGTCCTCTACAAACCGCTCAACAGGTAGTTATTGTCGATTTTTCTCACTGAACGTTGTAAAGGATCACGAGCTACTACACCCTCCATCGTCTGTGGAGGAATGTTGTTTTATAGAACTGCCTTTTGGCGAAAGTTTGCTAGCAACAAAATAACTCTTATTCTGATCAATATTTCTTCAATCTGTGAAGAAATGTCTGTTTCATAGAACTGCTTGGCCAAAAAAGTTATATTACCTTTTCTCTAATTGTGTCAATAGCTAGTAGGTTTTGATAGATCTAAGTGGGGAAGTCTTGGTCTAAGCCTACGTCTTGCTCAGTTTTAGCATTCTCGTGTGCTACGTTCGACAAATTATTTTGGTTCCTGATTTTAGATTGGATTATTAAATAATTTTGGTCTTGGATGTTTAATTATCCAAGATCACTCCCAACTTTGGAATAACTTCCCTTTAGAAAAGAATGGATGTTTGTAGACTTTGAACATCTTAGGTGAGAAA

Coding sequence (CDS)

ATGGGTAATGCCAATGGTAGGGAGCAGAGTACTCCCGGAGCACCACCTGCCGGAGGAAGACCTGACGTCGATGAGCAAAGTCCGGCAATTACTTCGGAAACCAGTGAAACTAGTAACGTTGTTTCTTCAGATTCGATGGGAAATACTCCTCCTCAAAGCCCTGGGAAGTTCCGATCCCCGATCTTGTTCGCTCCCCAGATTCCAGTGGCTCCCTTGCAAGGAGGTAATGGTCCAACCCATTACAGTGGAGCCTGGCAGAACGAATTCGAGGGAGCTGTAGATAGTCCTCCAGAGCAAGGAGTCCCGACAATCATCACATGGAGCTTTGGAGGCAATAATGTTGCCGTTGAGGGGTCTTGGGATAACTGGGCTTCCAGGAAAACCCTGCAGAGGACTGGCAAAGATTTTTCGCTACTTATGGTCCTTCCATCTGGAGTATATCATTATAAGTTCATCGTCGATGGTCAACGAAGATATATTCCAGATCTTCCTTTCATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTTTGTTTCCATTCTGTAGGATAGTGTGCCTGATATTCTACAGAGTGTGGCCGAGTTTGAGCCTCCACAATCACCAGAGACAACTTACAGCCAGACATTCCCCACCGAGGAAGACTTCGCCAAGGAGCCAGCAGCCGTACCATCGCAGCTCCACCTCACGGTTCTCGGCATGGAGAACGCAGATGAAGCTTCATCCTCAAAACCTCAACACGTTGTGCTTAACCACCTTTTTATAG

Protein sequence

MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSPILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSWDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSLFPFCRIVCLIFYRVWPSLSLHNHQRQLTARHSPPRKTSPRSQQPYHRSSTSRFSAWRTQMKLHPQNLNTLCLTTFL
Homology
[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.7e-50
Identity = 103/187 (55.08%), Postives = 129/187 (68.98%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETS-----NVVSSDSMGNTPPQSPG 60
           MGNANG+++       A G    D  S +  S   + S        SSDSM ++PP SP 
Sbjct: 1   MGNANGKDEDA-----AAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSMSSSPPGSPA 60

Query: 61  KFRSPILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVA 120
           +  SP LFAPQ+PVAPLQ  N P   +  W N+ +   D+PPEQG+PTIITW+ GGN+VA
Sbjct: 61  RSPSPFLFAPQVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVA 120

Query: 121 VEGSWDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFN 180
           VEGSWDNW SRK LQ++GKD S+L VLPSG+YHYK IVDG+ +YIPDLPF+ADE+GNV N
Sbjct: 121 VEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCN 180

Query: 181 LLNVSLF 183
           +L+V  F
Sbjct: 181 ILDVHNF 181

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 82/180 (45.56%), Postives = 115/180 (63.89%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGN N RE++      A    D +  S    S  S+ ++V   + MG +PP SP   +SP
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPHSPRATQSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAW-QNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGS 120
           ++FAPQ+PV PLQ  +     + +W Q+      ++  EQG+PT+ITW  GG  +AVEGS
Sbjct: 61  LMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGS 120

Query: 121 WDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNV 180
           WDNW +R  LQR+GKDF+++ VLPSGVY Y+FIVDGQ R+ P+LP   D+ GN FN+L++
Sbjct: 121 WDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDL 180

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.6e-16
Identity = 51/157 (32.48%), Postives = 81/157 (51.59%), Query Frame = 0 

Query: 84  AWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSWDNWASRKTLQRTGKDFSLLMVLP 143
           +WQ + E +V  P +Q  PT+I WS GG  V + GS++NW+++  L ++  DF  ++ LP
Sbjct: 61  SWQQDLEDSV-KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLP 120

Query: 144 SGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSLFPFCRIVCLIFYRVWPSLSLHN 203
            G + YKF VDGQ  + P  P +  ++G + NL++V    F          V+ +L L +
Sbjct: 121 EGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDF---------EVFDALKLDS 180

Query: 204 HQRQLTA----RHSPPRKTSPRSQQPYHRSSTSRFSA 237
            +   T+      SPP    P  Q+ Y   S  RF +
Sbjct: 181 MESSETSCRDLSSSPP---GPYGQEMYAFRSEERFKS 204

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-15
Identity = 50/156 (32.05%), Postives = 80/156 (51.28%), Query Frame = 0 

Query: 85  WQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSWDNWASRKTLQRTGKDFSLLMVLPS 144
           WQ + + +V  P +Q  PT+I WS GG  V + GS++NW+++  L ++  DF  ++ LP 
Sbjct: 61  WQQDLDDSV-KPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 145 GVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSLFPFCRIVCLIFYRVWPSLSLHNH 204
           G + YKF VDGQ  + P  P +  ++G + NL++V    F          V+ +L L + 
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDF---------EVFDALKLDSM 180

Query: 205 QRQLTA----RHSPPRKTSPRSQQPYHRSSTSRFSA 237
           +   T+      SPP    P  Q+ Y   S  RF +
Sbjct: 181 ESSETSCRDLSSSPP---GPYGQEMYVFRSEERFKS 203

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-15
Identity = 50/156 (32.05%), Postives = 80/156 (51.28%), Query Frame = 0 

Query: 85  WQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSWDNWASRKTLQRTGKDFSLLMVLPS 144
           WQ + + +V  P +Q  PT+I WS GG  V + GS++NW+++  L ++  DF  ++ LP 
Sbjct: 61  WQQDLDDSV-KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 145 GVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSLFPFCRIVCLIFYRVWPSLSLHNH 204
           G + YKF VDGQ  + P  P +  ++G + NL++V    F          V+ +L L + 
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDF---------EVFDALKLDSM 180

Query: 205 QRQLTA----RHSPPRKTSPRSQQPYHRSSTSRFSA 237
           +   T+      SPP    P  Q+ Y   S  RF +
Sbjct: 181 ESSETSCRDLSSSPP---GPYGQEMYVFRSEERFKS 203

[Close]
BLAST of Cucsat.G7165.T7 vs. NCBI nr
Match: XP_004144095.1 (SNF1-related protein kinase regulatory subunit beta-1 [Cucumis sativus] >KGN66385.1 hypothetical protein Csa_006859 [Cucumis sativus])

HSP 1 Score: 370 bits (951), Expect = 1.38e-126
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP
Sbjct: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120
           ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW
Sbjct: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120

Query: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180
           DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS
Sbjct: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180

[Close]
BLAST of Cucsat.G7165.T7 vs. NCBI nr
Match: XP_008451036.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo] >TYK09943.1 SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo var. makuwa])

HSP 1 Score: 348 bits (892), Expect = 1.30e-117
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGNANGREQSTPGAP AGGR DVD QSPAI+S  SETSNVVSSDSMGNTPP SPGKFRSP
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGNTPPHSPGKFRSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120
           ILFAPQIPVAPLQGGNGPTHY+GAWQNEF+GA+DSPPEQG+PTIITWS+GG+NVAVEGSW
Sbjct: 61  ILFAPQIPVAPLQGGNGPTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGSW 120

Query: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180
           DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS
Sbjct: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180

[Close]
BLAST of Cucsat.G7165.T7 vs. NCBI nr
Match: KAA0055694.1 (SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo var. makuwa])

HSP 1 Score: 345 bits (884), Expect = 2.13e-116
Identity = 166/180 (92.22%), Postives = 173/180 (96.11%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGNANGREQSTPGAP AGGR DVD QSPAI+S  SETSNVVSSDSMGNTPP SPGKFRSP
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGNTPPHSPGKFRSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120
           ILFAPQIPVAPLQGGNGPTHY+GAWQNE +GA+DSPPEQG+PTIITWS+GG+NVAVEGSW
Sbjct: 61  ILFAPQIPVAPLQGGNGPTHYNGAWQNECDGAIDSPPEQGIPTIITWSYGGSNVAVEGSW 120

Query: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180
           DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS
Sbjct: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180

[Close]
BLAST of Cucsat.G7165.T7 vs. NCBI nr
Match: XP_038880301.1 (SNF1-related protein kinase regulatory subunit beta-1 [Benincasa hispida])

HSP 1 Score: 323 bits (827), Expect = 1.16e-107
Identity = 159/185 (85.95%), Postives = 169/185 (91.35%), Query Frame = 0 

Query: 1   MGNANGREQSTPGA----PPAGGRPDVDEQSPAITSE-TSETSNVVSSDSMGNTPPQSPG 60
           MGNANGRE+S PG     P AGGR +VD QSPAI S  TSETSNVVSSDSMGNTPP SPG
Sbjct: 1   MGNANGREESFPGGGGGPPAAGGRANVDVQSPAIDSSVTSETSNVVSSDSMGNTPPHSPG 60

Query: 61  KFRSPILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVA 120
           KFRSPILFAPQ+PVAPLQGGNGPTHY+ AWQNEF GA+D+PPEQG+PTIITWS+GGN+VA
Sbjct: 61  KFRSPILFAPQVPVAPLQGGNGPTHYNEAWQNEFGGAIDNPPEQGIPTIITWSYGGNSVA 120

Query: 121 VEGSWDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFN 180
           VEGSWDNW SRKTLQRTGKDFSLL+VLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFN
Sbjct: 121 VEGSWDNWTSRKTLQRTGKDFSLLLVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFN 180

[Close]
BLAST of Cucsat.G7165.T7 vs. NCBI nr
Match: XP_022960692.1 (SNF1-related protein kinase regulatory subunit beta-1-like [Cucurbita moschata])

HSP 1 Score: 298 bits (763), Expect = 6.05e-98
Identity = 148/186 (79.57%), Postives = 162/186 (87.10%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPP-----AGGRPDVDEQSPAITSE-TSETSNVVSSDSMGNTPPQSP 60
           MGNANG+E+S+PG        AGGR D D Q PAI S  TSETSN +SSDSMGNTPP SP
Sbjct: 1   MGNANGKEESSPGGGSGGGGGAGGRGDADRQGPAIVSSVTSETSNAISSDSMGNTPPDSP 60

Query: 61  GKFRSPILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNV 120
           GKFRSPILFAPQ+PVAPL GGNGPTH++ AWQNE   AVD+PP QG+PTIITWS+GG++V
Sbjct: 61  GKFRSPILFAPQVPVAPL-GGNGPTHFNEAWQNELHEAVDNPPVQGIPTIITWSYGGSSV 120

Query: 121 AVEGSWDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVF 180
           AVEGSWDNWASRKTLQR+GKDFS+LMVLPSGVYHYKF VDGQRRYIPDLPFIADEMGNVF
Sbjct: 121 AVEGSWDNWASRKTLQRSGKDFSILMVLPSGVYHYKFTVDGQRRYIPDLPFIADEMGNVF 180

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy TrEMBL
Match: A0A0A0LWX6 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600250 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 6.69e-127
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP
Sbjct: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120
           ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW
Sbjct: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120

Query: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180
           DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS
Sbjct: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy TrEMBL
Match: A0A5D3CDJ6 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00700 PE=3 SV=1)

HSP 1 Score: 348 bits (892), Expect = 6.28e-118
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGNANGREQSTPGAP AGGR DVD QSPAI+S  SETSNVVSSDSMGNTPP SPGKFRSP
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGNTPPHSPGKFRSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120
           ILFAPQIPVAPLQGGNGPTHY+GAWQNEF+GA+DSPPEQG+PTIITWS+GG+NVAVEGSW
Sbjct: 61  ILFAPQIPVAPLQGGNGPTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGSW 120

Query: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180
           DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS
Sbjct: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy TrEMBL
Match: A0A1S3BQK7 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo OX=3656 GN=LOC103492444 PE=3 SV=1)

HSP 1 Score: 348 bits (892), Expect = 6.28e-118
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGNANGREQSTPGAP AGGR DVD QSPAI+S  SETSNVVSSDSMGNTPP SPGKFRSP
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGNTPPHSPGKFRSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120
           ILFAPQIPVAPLQGGNGPTHY+GAWQNEF+GA+DSPPEQG+PTIITWS+GG+NVAVEGSW
Sbjct: 61  ILFAPQIPVAPLQGGNGPTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGSW 120

Query: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180
           DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS
Sbjct: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy TrEMBL
Match: A0A5A7UKJ0 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00750 PE=3 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.03e-116
Identity = 166/180 (92.22%), Postives = 173/180 (96.11%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSETSETSNVVSSDSMGNTPPQSPGKFRSP 60
           MGNANGREQSTPGAP AGGR DVD QSPAI+S  SETSNVVSSDSMGNTPP SPGKFRSP
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGNTPPHSPGKFRSP 60

Query: 61  ILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSW 120
           ILFAPQIPVAPLQGGNGPTHY+GAWQNE +GA+DSPPEQG+PTIITWS+GG+NVAVEGSW
Sbjct: 61  ILFAPQIPVAPLQGGNGPTHYNGAWQNECDGAIDSPPEQGIPTIITWSYGGSNVAVEGSW 120

Query: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180
           DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS
Sbjct: 121 DNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVS 180

[Close]
BLAST of Cucsat.G7165.T7 vs. ExPASy TrEMBL
Match: A0A6J1H851 (SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461411 PE=3 SV=1)

HSP 1 Score: 298 bits (763), Expect = 2.93e-98
Identity = 148/186 (79.57%), Postives = 162/186 (87.10%), Query Frame = 0 

Query: 1   MGNANGREQSTPGAPP-----AGGRPDVDEQSPAITSE-TSETSNVVSSDSMGNTPPQSP 60
           MGNANG+E+S+PG        AGGR D D Q PAI S  TSETSN +SSDSMGNTPP SP
Sbjct: 1   MGNANGKEESSPGGGSGGGGGAGGRGDADRQGPAIVSSVTSETSNAISSDSMGNTPPDSP 60

Query: 61  GKFRSPILFAPQIPVAPLQGGNGPTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNV 120
           GKFRSPILFAPQ+PVAPL GGNGPTH++ AWQNE   AVD+PP QG+PTIITWS+GG++V
Sbjct: 61  GKFRSPILFAPQVPVAPL-GGNGPTHFNEAWQNELHEAVDNPPVQGIPTIITWSYGGSSV 120

Query: 121 AVEGSWDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVF 180
           AVEGSWDNWASRKTLQR+GKDFS+LMVLPSGVYHYKF VDGQRRYIPDLPFIADEMGNVF
Sbjct: 121 AVEGSWDNWASRKTLQRSGKDFSILMVLPSGVYHYKFTVDGQRRYIPDLPFIADEMGNVF 180

The following BLAST results are available for this feature:
BLAST of Cucsat.G7165.T7 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84VQ12.7e-5055.08SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX... [more]
Q9SCY51.1e-3845.56SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX... [more]
O437415.6e-1632.485'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2... [more]
Q6PAM02.1e-1532.055'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab... [more]
Q9QZH42.1e-1532.055'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=... [more]
BLAST of Cucsat.G7165.T7 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144095.11.38e-126100.00SNF1-related protein kinase regulatory subunit beta-1 [Cucumis sativus] >KGN6638... [more]
XP_008451036.11.30e-11792.78PREDICTED: SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo] ... [more]
KAA0055694.12.13e-11692.22SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo var. makuwa][more]
XP_038880301.11.16e-10785.95SNF1-related protein kinase regulatory subunit beta-1 [Benincasa hispida][more]
XP_022960692.16.05e-9879.57SNF1-related protein kinase regulatory subunit beta-1-like [Cucurbita moschata][more]
BLAST of Cucsat.G7165.T7 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWX66.69e-127100.00AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600250 PE=3... [more]
A0A5D3CDJ66.28e-11892.78SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuw... [more]
A0A1S3BQK76.28e-11892.78SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7UKJ01.03e-11692.22SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuw... [more]
A0A6J1H8512.93e-9879.57SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita moschata... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 94..181
e-value: 1.8E-21
score: 77.8
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 101..180
e-value: 9.6E-30
score: 102.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 102..179
e-value: 4.48753E-25
score: 93.0472
IPR037170SNF1-related protein kinase regulatory subunit beta-1PANTHERPTHR46316:SF9SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1coord: 1..180
IPR043554SNF1-related protein kinase regulatory subunit betaPANTHERPTHR46316SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1coord: 1..180
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 99..179

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G7165Cucsat.G7165gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7165.T7.E1Cucsat.G7165.T7.E1exon
Cucsat.G7165.T7.E2Cucsat.G7165.T7.E2exon
Cucsat.G7165.T7.E3Cucsat.G7165.T7.E3exon
Cucsat.G7165.T7.E4Cucsat.G7165.T7.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G7165.T7.C4Cucsat.G7165.T7.C4CDS
Cucsat.G7165.T7.C3Cucsat.G7165.T7.C3CDS
Cucsat.G7165.T7.C2Cucsat.G7165.T7.C2CDS
Cucsat.G7165.T7.C1Cucsat.G7165.T7.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G7165.T7Cucsat.G7165.T7-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043562 cellular response to nitrogen levels
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0009507 chloroplast
cellular_component GO:0031588 nucleotide-activated protein kinase complex
molecular_function GO:1901982 maltose binding
molecular_function GO:0005515 protein binding
molecular_function GO:0019887 protein kinase regulator activity