Cucsat.G6565.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G6565.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Histone H2B
Location	ctg1451: 192163 .. 197055 (-)
RNA-Seq Expression	Cucsat.G6565.T6
Synteny	Cucsat.G6565.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTTCGTTATATTTAGCAATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTTCATCCCGACATCGGAATCTCCAGCAAGGCAATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAGATTCATAGATTTTAGGGTTTTCTCGTGTAAAAAAGCAGGATCACTGTTCTGGATCGTTGATTTCTTTTGCTCTTGTTGCATATTTTGGAATTGAATGAATGAAAATCGGTTTACATGATTCTAATTCTTTTGTTAATTGCTTGGTCATGTCCTCATCGTTCAGATTGTTTGCTGGGCGGTCTCTGAAGATTTACCATAATTTCACCTTAACAAATTTGTATGCCTGAGACTGAGTCTGACTTCAACTAGTATTTTGAGTTTGTTGCTTTTCAATTGTCCAGGCAGAAGGTATTGATTCAATGCCGTTGAATATGCTTCAAATTTTTCCTCTTAGTTCGAGTTCTAGGGTGAATAATTTTTTATTTATGTTTTGAAGATGCCTGTGAAAATGATTGTACAAACTGTAGATTTCTGTGTTTTTAATGGGAACTTTTCATTGTGGGGTTTCTACAATTTCTTGGACAATGATTTCTGTGTCCCTTATGTTTGGTATCTTCAATTTGGTATCAGGGTGTTGAATCCATAGGCATAAATCTTGAATCCAACCCCATTTTATTGATTAGTGGTTAAAGTTGTCATCCACGGGTGATGTTCTGAGTTAATTCAACACGTTGGAGAATTTTCAACCAATAAACAGTCCCATCAATCCACAGGTTAAGCTTCACATTGTGGCCATTTCTGAGCATCTATTGTTTGAGAATGAAAAATTATTGCTTTCCTTTTTACCTTTGGATGATTTTGAGTTTAGGCAAGGGAGATCTAAGTGCTTTTTGTCCTTTTTACCTTAGAATGAAAAATTATTGCTTTCCTACTCTGTCTCAAGGCCTCCTCTTTGTTTGACCAGATGAGAATGGTTGGGAAAGAGCCGACGCCACCACACCTCCAAGGTAGTTGATTCAGAATTAATCGTAAAATAGCTTCACCTTTCCATGTATTATTAACTGCAATATGGGATCATTCCTGCATTATCACTGCTATTGTCACCTGATGACTTTGATAAGCCTGAGTTCTCATCAGTTACGATTCAGCGGGATTTATTTTATGGTTATGATACACTAATGGAGAATGTTCTCCATCAGATCCTTCCCACATAAATTTTGCTCATCACTAGGCAAGGGAGGGCCAACGTGAAAAACCTTTTCAACTAAACTTGAAATTTGCACCAGTGGTTTAGTTATTGATTGAATCATTATGGTCGTTTGTGTTTTTCTTTTCTTTCTGTTTCTGATGAATGCTAAGTGAAAGAAATGTGTCATATATAAAGAACTAAAAAACTTCAATGTTACCTGCTGGGTGCTGTTAAATATTTACTATGATTTAGAAGAGATTATGTTTCAGGAAACAAGAGCATTTGATAGGAACAGTCCTGCTGATATGGTAGTACTGTACTTCGTGTATATTAGTAAACTTGGTCTACAAAATCACATTTGTTTTTTGTTGAACATCACAATGTCTTGCTTCTGAAAGGAACATTTTCACAGGTTACAGGGAGGCAGGACCAAGCAAAACCTTTACCTTTCAAGGTGGATTCTAATGGTTCCTGGGGATTTTCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTTCTCCTTGTTACTATATCAACAAGTAAAGATTTCACTCTTTTTCTCCTGTATTCACATTTGAACAATGCATAGCTTAAGATTGTTGGAACCATCCCTTACATATCTGATATTATACATCAATAGATATGCTTATGCATTTATGATGATTTGGTACCTCATGCATTAAGCGATAAATTTTTGGTAGCTTAGTATACTGGCTGATAGAGTGATAGTTTATTGACAGTGGGCTATTTCTCTCAATTCTATTCCAAATTTGGCCAGTCTTCTCTGGCATCTCTGTCTTCCTTATAAACTTCTTACTACTAACAGCTTAACTAACTCGCTTTTCCTAACCATATGCATAAAAAAGTTCTTTTCAATGATTATTCTACCTCCTTGATCCTACAAATGACCAATTGGACATGGGCATAAGCTTCATTCACTATCAAGTGTCAGTTTGCGTTATACATGTAAACAGATTGTCCAAGGATTCTTGAATCCAAAGCTGCAAATTTGAAGCAAATTATTTAATGTGTATTTGAACATTGTATGACCAACTATGAGTTTATGCTCAAATGACAAAAAGTTTCGAGCCTTACTAATTAAGGGATCAATTAGGATATAAATAACACATACACATACCATGATGACCATCCGGAATTTGGCAATTTTTTTTAAAAAGAAAAAAGTTTCATTTCTCACTCTTTCTTTTTGGATGCATTCCTGGATACAAATTTTAATAATGTTAGGCTGAGCAGGTAAGTATTATTCTTAAGAAATGTTTAATATTTGAAGTCAAGTATTATTTTATAATGTAGGGAGGGAAACGATAGTTAATAACAAGTGACCAGAGGAACCCAAGCACGTGAACCTTGAGACTTGAGTGTATTAGACCTGTTTAACGTTTCAGAATTTTTATAATTTTTCCACCATGAGAAAGACAGTATGTGCCATTTGAAATTATAGCTCTAGGAAATGGAAGGCAAAAAGAAATTAGAGAACTTTGATAGGAAAATGTTAGGAAAATTTCAAGTGCATTTGCTGTGCATCTTTGATCACAGGAATGTGTCATCAGTTATGAAGGTGAGGATATTGAGATCACGGTAAATGAACAATTGCTTCAAGTTTGGTGAAATGAGCATGGGGTAGGAAATGAATAATGGAGTAGTCTTGAATGAGTATTCCAAGGAGGAGTACACCAGATTTTTTAATTGCCAAAATAGGTTTTAGGAATTTATATCCTTATTCCATTTTATGCATTCAAGAAGGAAGGCAAAACAGGCTGTGGTGTAAGGAAGGGAGAAATGAATAGTAAGAACTAACTAGAGGTTCTTTAGTTTTGTGAAATTACGAGACATCTCAAAACTTGACTCTTGGAGCTTTTCTCAAAAAAAAAAAAAAAAAAAAAAACAGTTACAATACAAGTCCTCTAGCATAAAATTAGCAACACCCTACTGAATTTATTGGCAACTGTTTCAACATTCTATTTCCTTTTGTTTAAGTGCTAAATATTATGAATCCCTTATACACAAATTCCTATAGGTTTTAACTTTACTGTAAAGTTTTCTTCGGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAAAAATGGGTAATGTGGATTTCCTCCTTCAATGTGCTAGTGGGTCCTGGAAAAATTCGTTCTATTGTATGTACTGCTCGAAACTTCTTCCAGTTTTCAATGGCCGGTCCTGTTTGATGGCAGGCAAGCAGTGCGGTGTTAATTAGATCTGTTTCTTATTTTTATGATATACTATCATCTCCACCGTTATTGGTCATTCAACATGCATTATATGTGATATTACAGTGTTTGACTTCCTAAGTTTGCTTTTTCTATTAGGTAGTTCCTCGATGGCACAAGCATTGGACTTGGAATAAGGTATATGATGGAGACATGATTGTTCTTTAGGGTCAAGAGAAGATATTTTTATCAATGGAAGGTTCGACAAATGTAAAGAATACACTAAAATAACGTTCACACCATAGCATTCAGAAATTGGCTGAATCGGCATGGAAAGGGCCAAAACCGAATAGTTCAGAGCTAGCAGCCACTAGCGCCTGTCATCAACAGTTCTATCTAGAACTCAGGTACTGAAAATTACCAGCATCTTGATTGTTTTTATAAAACTAAATGCTAAAAAGCATGAACACTTCAATTTAACTAGGAATATTCGTGTACAATTTGTCCAATTTCTACCATTATTGTAAGTATGTAAGTCCAATTTTAACGATCCCAAGTGTAAGGACCTAATTTTTACTATTAAAAATAAGTGTGGTTGATGGGACTATTCTTTGGGTTGATTTTTGTCTTCTATTATCATCTCCACTACAGACTACAGATGCTGGACAGATTTGAGCAACACACTCCATTGTTTCATCATGTAAAGGAGCTTATAAAACATTTCAAACAGTGCAAAATTGCAAAAGCTCCTAATTGGTGCAGCTGTAGTTTTTGCGGCCAACGCCGGCATCTCTTCTGCTTTACAGATATGTATTATTCTCACTAGTCTTGCACTCACAAGCACCGGCTTGGCTTACGCTCTGTTTGAACTTCAAAGTGAATTGTGTTTTTGAACTTCAAAAGATTTGTGTGTTCATTGACTATGTTCATGGGGAGATTGATTAGAAGATACCATTAGAGATTGAGAAAGAAATTGTTGTTTAGAGAAGTAGGATTTTAACCAAGTAATGTTATATAGATTTTACAAAGGTATCATGGTTGAACATTTTAAAACAAAAGTAGAGATGAATGTATCCTTTCCTTTTTCGTAGTCTCGTATTTTGTTGATGGATTTTTAATTTTGATTCTTTACAATCAAAACACATGCTTTTGTCCTTCAAT

Coding sequence (CDS)

CCTTCGTTATATTTAGCAATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTTCATCCCGACATCGGAATCTCCAGCAAGGCAATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGGTGTTGA

Protein sequence

PSLYLAMAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGC

Homology

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy Swiss-Prot
Match: Q9LZT0 (Histone H2B.7 OS=Arabidopsis thaliana OX=3702 GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 191.0 bits (484), Expect = 8.1e-48
Identity = 109/125 (87.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDA---SDKKKKRAKKSIETYKI 66
           MAPKAEKKPAEKKP  E+ KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+ETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 67  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 126
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 127 LVLPG 129
           LVLPG
Sbjct: 121 LVLPG 125

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 189.5 bits (480), Expect = 2.4e-47
Identity = 110/127 (86.61%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKK-AEKTPAEKKPRAEKKLPKD----ASDKKKKRAKKSIETY 66
           MAPKAEKKPAEKKPA E+K  AEK PAEKKP+A KKLPK+    A DKKKKR KKS+ETY
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETY 60

Query: 67  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 126
           KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTA
Sbjct: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 120

Query: 127 VRLVLPG 129
           VRLVLPG
Sbjct: 121 VRLVLPG 127

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-47
Identity = 110/130 (84.62%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAA-----EEKKAEKTPAEKKPRAEKKLPKDA---SDKKKKRAKKSI 66
           MAPKAEKKPAEKKPA+     E+ KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 67  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 126
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 127 QTAVRLVLPG 129
           QTAVRLVLPG
Sbjct: 121 QTAVRLVLPG 130

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy Swiss-Prot
Match: Q9LQQ4 (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-47
Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAA-----EEKKAEKTPAEKKPRAEKKL-PKDASDKKKKRAKKSIET 66
           MAP+AEKKPAEKK AA     E K AEK PAEKKP+A KKL PK+A DKKKKR+KK++ET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 67  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 126
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 127 AVRLVLPG 129
           AVRLVLPG
Sbjct: 121 AVRLVLPG 128

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy Swiss-Prot
Match: O49118 (Histone H2B OS=Capsicum annuum OX=4072 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-47
Identity = 112/126 (88.89%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 7   MAPKAE--KKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDAS--DKKKKRAKKSIETYK 66
           MAPKA   KKPAEKKP  EEKKAE+ PAEKKP+A KKLPKDA   DKKKKRAKKSIETYK
Sbjct: 1   MAPKAAAGKKPAEKKP-VEEKKAEEVPAEKKPKAGKKLPKDAGRPDKKKKRAKKSIETYK 60

Query: 67  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV 126
           IYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAV
Sbjct: 61  IYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 120

Query: 127 RLVLPG 129
           RLVLPG
Sbjct: 121 RLVLPG 125

[Close]

BLAST of Cucsat.G6565.T6 vs. NCBI nr
Match: XP_004139453.1 (histone H2B.7 [Cucumis sativus] >KGN64858.1 hypothetical protein Csa_022751 [Cucumis sativus])

HSP 1 Score: 219 bits (559), Expect = 3.09e-71
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. NCBI nr
Match: KAE8652780.1 (hypothetical protein Csa_022685 [Cucumis sativus])

HSP 1 Score: 220 bits (560), Expect = 7.63e-71
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 5   LAMAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIY 64
           L+MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIY
Sbjct: 37  LSMAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIY 96

Query: 65  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL 124
           IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Sbjct: 97  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL 156

Query: 125 VLPG 128
           VLPG
Sbjct: 157 VLPG 160

[Close]

BLAST of Cucsat.G6565.T6 vs. NCBI nr
Match: XP_038893815.1 (histone H2B.7-like [Benincasa hispida] >XP_038894882.1 histone H2B.7-like [Benincasa hispida] >KAA0032591.1 histone H2B.7 [Cucumis melo var. makuwa] >KGN64852.1 hypothetical protein Csa_022825 [Cucumis sativus] >KAA0032596.1 histone H2B.7 [Cucumis melo var. makuwa] >KAA0032602.1 histone H2B.7 [Cucumis melo var. makuwa] >TYK20883.1 histone H2B.7 [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (554), Expect = 1.78e-70
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. NCBI nr
Match: XP_022964661.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970348.1 histone H2B.7-like [Cucurbita maxima] >XP_023519437.1 histone H2B.7-like [Cucurbita pepo subsp. pepo] >KAG6583589.1 Histone H2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019290.1 Histone H2B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216 bits (551), Expect = 5.11e-70
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDA+DKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. NCBI nr
Match: XP_022964641.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970349.1 histone H2B.7-like [Cucurbita maxima] >XP_023519436.1 histone H2B.7-like [Cucurbita pepo subsp. pepo] >KAG6583590.1 Histone H2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019291.1 Histone H2B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216 bits (551), Expect = 5.11e-70
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKK+AKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy TrEMBL
Match: A0A0A0LST8 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1)

HSP 1 Score: 219 bits (559), Expect = 1.49e-71
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy TrEMBL
Match: A0A0A0LV55 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 218 bits (554), Expect = 8.64e-71
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy TrEMBL
Match: A0A5A7SNI2 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00170 PE=3 SV=1)

HSP 1 Score: 218 bits (554), Expect = 8.64e-71
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy TrEMBL
Match: A0A6J1I594 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469341 PE=3 SV=1)

HSP 1 Score: 216 bits (551), Expect = 2.48e-70
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKK+AKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. ExPASy TrEMBL
Match: A0A6J1I3M0 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469340 PE=3 SV=1)

HSP 1 Score: 216 bits (551), Expect = 2.48e-70
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 66
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDA+DKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRAKKSIETYKIYIF 60

Query: 67  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 126
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 127 PG 128
           PG
Sbjct: 121 PG 122

[Close]

BLAST of Cucsat.G6565.T6 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 5.8e-49
Identity = 109/125 (87.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDA---SDKKKKRAKKSIETYKI 66
           MAPKAEKKPAEKKP  E+ KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+ETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 67  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 126
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 127 LVLPG 129
           LVLPG
Sbjct: 121 LVLPG 125

[Close]

BLAST of Cucsat.G6565.T6 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 4.9e-48
Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAA-----EEKKAEKTPAEKKPRAEKKL-PKDASDKKKKRAKKSIET 66
           MAP+AEKKPAEKK AA     E K AEK PAEKKP+A KKL PK+A DKKKKR+KK++ET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 67  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 126
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 127 AVRLVLPG 129
           AVRLVLPG
Sbjct: 121 AVRLVLPG 128

[Close]

BLAST of Cucsat.G6565.T6 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 4.9e-48
Identity = 110/130 (84.62%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAA-----EEKKAEKTPAEKKPRAEKKLPKDA---SDKKKKRAKKSI 66
           MAPKAEKKPAEKKPA+     E+ KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 67  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 126
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 127 QTAVRLVLPG 129
           QTAVRLVLPG
Sbjct: 121 QTAVRLVLPG 130

[Close]

BLAST of Cucsat.G6565.T6 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 8.3e-48
Identity = 110/130 (84.62%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 7   MAPKAEKKPAEKKPAA-----EEKKAEKTPAEKKPRAEKKLPKDA---SDKKKKRAKKSI 66
           MAP+AEKKPAEKKPAA     E+ KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 67  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 126
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120

Query: 127 QTAVRLVLPG 129
           QTAVRLVLPG
Sbjct: 121 QTAVRLVLPG 130

[Close]

BLAST of Cucsat.G6565.T6 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 7.1e-47
Identity = 110/131 (83.97%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 7   MAPK-----AEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDA----SDKKKKRAKKS 66
           MAPK     AEKKPAEK PA EEK AEK PAEKKP+A KKLPK+A     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 67  IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 126
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 127 IQTAVRLVLPG 129
           IQTAVRLVLPG
Sbjct: 121 IQTAVRLVLPG 131

The following BLAST results are available for this feature:

BLAST of Cucsat.G6565.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZT0	8.1e-48	87.20	Histone H2B.7 OS=Arabidopsis thaliana OX=3702 GN=At3g46030 PE=1 SV=3	[more]
O22582	2.4e-47	86.61	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
P40283	6.9e-47	84.62	Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5	[more]
Q9LQQ4	6.9e-47	85.94	Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3	[more]
O49118	6.9e-47	88.89	Histone H2B OS=Capsicum annuum OX=4072 GN=HIS2B PE=2 SV=3	[more]

BLAST of Cucsat.G6565.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139453.1	3.09e-71	100.00	histone H2B.7 [Cucumis sativus] >KGN64858.1 hypothetical protein Csa_022751 [Cuc...	[more]
KAE8652780.1	7.63e-71	98.39	hypothetical protein Csa_022685 [Cucumis sativus]	[more]
XP_038893815.1	1.78e-70	99.18	histone H2B.7-like [Benincasa hispida] >XP_038894882.1 histone H2B.7-like [Benin...	[more]
XP_022964661.1	5.11e-70	98.36	histone H2B.7-like [Cucurbita moschata] >XP_022970348.1 histone H2B.7-like [Cucu...	[more]
XP_022964641.1	5.11e-70	98.36	histone H2B.7-like [Cucurbita moschata] >XP_022970349.1 histone H2B.7-like [Cucu...	[more]

BLAST of Cucsat.G6565.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LST8	1.49e-71	100.00	Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1	[more]
A0A0A0LV55	8.64e-71	99.18	Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1	[more]
A0A5A7SNI2	8.64e-71	99.18	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00170 PE...	[more]
A0A6J1I594	2.48e-70	98.36	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469341 PE=3 SV=1	[more]
A0A6J1I3M0	2.48e-70	98.36	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469340 PE=3 SV=1	[more]

BLAST of Cucsat.G6565.T6 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46030.1	5.8e-49	87.20	Histone superfamily protein	[more]
AT1G07790.1	4.9e-48	85.94	Histone superfamily protein	[more]
AT5G59910.1	4.9e-48	84.62	Histone superfamily protein	[more]
AT3G45980.1	8.3e-48	84.62	Histone superfamily protein	[more]
AT2G28720.1	7.1e-47	83.97	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 80..100 score: 75.74 coord: 119..129 score: 64.22 coord: 61..79 score: 80.55 coord: 102..119 score: 76.51
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 51..128 e-value: 1.4E-45 score: 167.4
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 11..128
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 6..129 e-value: 2.3E-44 score: 152.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 32..128
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 11..124 e-value: 1.8E-22 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
None	No IPR available	PANTHER	PTHR23428:SF258	HISTONE H2B	coord: 11..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G6565	Cucsat.G6565	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6565.T6.E1	Cucsat.G6565.T6.E1	exon
Cucsat.G6565.T6.E2	Cucsat.G6565.T6.E2	exon
Cucsat.G6565.T6.E3	Cucsat.G6565.T6.E3	exon
Cucsat.G6565.T6.E4	Cucsat.G6565.T6.E4	exon
Cucsat.G6565.T6.E5	Cucsat.G6565.T6.E5	exon
Cucsat.G6565.T6.E6	Cucsat.G6565.T6.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6565.T6.C2	Cucsat.G6565.T6.C2	CDS
Cucsat.G6565.T6.C1	Cucsat.G6565.T6.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6565.T6	Cucsat.G6565.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity