Cucsat.G5938.T8 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G5938.T8
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein FLX-like 3
Location	ctg1402: 2814044 .. 2819678 (-)
RNA-Seq Expression	Cucsat.G5938.T8
Synteny	Cucsat.G5938.T8

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATTTAATTTACCAAAGAAGACAATCATCCCAAAGGTGTAAAATGGGCCGATGGAACTTTGAACTTTTGAAACAATCAGTTGATGAACGAAAACTTGCCCTAGGGTTCCCAATTTTCCTTACCTGAACCCCTAAACCTTTCCCTCTCGGAGATTACACCATTTCGCTTCTCCCTTTACTTCGTGTAAGTTCCTCTTCCTTCTTCTTCTTCCATTTTAATCGCAAAATCGTCAGCCTCTCCCCATGGAGCAAAGGGGTTTTCGCCGTTTTCTTCTGAAACCATTGATTTTCTTTGCTCATCTTTTCGTGTTTCCGATGTTCGAAATTTTCGTCTTTCCTCTGTTTCCTTAAAACAACTCCATCCATCCAAGGAGGAAGCGTTATATATTGTTATTATTGTTATTATTATTTTTGTTTGTAGCTGTGTTTATACATGTACGCATACGTTTTTAACGTTTCTGTGTTGTGTTTTCGATTGCGAAAGTGCTAGGTTCTTCTCCGGGTGAGTATTGTTTAGGTAACCTACTCAATCCCTCCTCTTTTCTCTGTATGATAATTTTTTTCGGGAAATTTGTGTCAAAGGCAATCAAAATTTTGTGAGTTCGATACAAACATCTTGGCGTTTGTTGATTTCAAATATGTGCTTTCCTTCAAATGAGAGAGGAAGATACCTTCTCACTGAATGACCCTTTTCGAAGTTTAAGCACTGGGCTTGGAAAGAGTTTGGACTTCACAACTATGTAAGCGATGGCATGGTCGAAAATGTTCTATCAATTGAAACTGTTTGGGGAAGGAGAAGCATTGGAAATAAAATGAGTGAGGTTAGACTTGAACAACTAATGATTTAAGAAAACAAAGAGACCTTGACAATGAGGCTTGTGGCTGTGCTGTGGAGAAATTCTAGAACTGGGTGCTATTAATTTGGACAGTCTAAGAACTGTATGATTAGGTTCCAGAGGCATGCTGTATGTTCTTTTGGAATGGTGTTTCTCAAATAACGTTCACCCAATCAGTTTTTTTTTTTTTTTTCTTAAATGGTCATTTTACAAAGTTGATACTGAAGTAGCTGTATTGGTATTTACTGAAGAAATTTTTGGTGGTCCTTGGAGTAATTTGAAGTACCTTTTGGATCCAGACGCAATACAAAGAGAGGAATTTTGCTGCTAGGCCTTCCCCAATCAACTTATTTATATCTAGATAGCAAGATGCAAAGGAAGTTTTGAGAGCTTCCTACCTCCTATTTCTCAAAGAGAACTAGAATTTACAAAGTAAAAGATATTGTAGTACAACAACTAAAGAAACTTACATATACCCCTCCAAGACCACTCAGCGTAATGGTTTACAGGGGACCACAAACACTAGTAATAAACTCTCTTTCTTCCCTTCAGCTTACGTGCCTCCTATCCTTTCCTTCTTCTTGCTTAGACAGACTTTAGTGATTAGGGGATTATAATTACCCACGACCAAATGAGCCACCATGTTCTCAAGGTACAAATTTGGAAATTGGGCTTGAATGGTGGACACAATCTCCCATGCGGCATCTGCCTGAGTAGCTTAAGATCCCAACGAATAAACACCTCCAATTCTCCCCTCATAGAAGGAGAAACATAGGAAAATTCTAGCCCATCGCCTTTTGGAGAAGGCTCGCATGAAGCATGGGATGAATCTTTACCATGTCATCAGACCTAATTTAGTCATAATCTGAAAAAGGCCAATAAAACATGGAGCTAACTTGGGATGGTTGTGTTGAAAAATGAAGGTTGCTGTTACAACCTTAATTTAAAATAAACCTACTGATCGACCTCAACATGCAAATCCCGTTGTTTTTTATTGGTTATATCTGCCAATAATTGCTAAGTTTGCAGCAATGATGCCTTCCAAGTATTCAACGTCGCATCTCTGTCTCAGAGTTGAACATCAACCTCGGAAACTACATATAAATCAGCATGTAGGGAATGATAGGGGTGGCGGCCAACCACAAACTACTTCACAAGGGGTAGGTTGTCTTAGTAGATTATGTTAAGTGATGTTGTAGCTTAAGTCCACCCAAGGAATCCATTTGTGCTCCACTTTGACAGGGACAACGAATAACGAACCCTCTCTTCCCAAAGCTCACAAGCCACCTATCTTTCCCTTCATGCGTAGACCGTAGTACTTATCATTTCTCTTCTTGTTTTTTACTTTTCGTGATTTGTAGAAATTGATTACATTGTGCATCTTTAAGCCTTCTTTTGAAGGCCTCTTGAACGATTGCTTAGCTGTTCATTGTAGTTTTCTGTTACTAATTAAAAACCCAAATCCTCCCTTCACGCAGTTGGACAAAACTTAGGTGTCCATCTTGAGATGTTTTCTAGTGGAACATTCGTATTAGGTTTATATTAGTTCCCGTTGATCTTGTTTACCAAAATAGGCGGCTGAGTTCTCTTCATGAGGTGAACGAAGGATGGCCATTGATAATTTCTCATCATTCTTTTAGTCATATACTCATTCAATACTAAGGTCACATCCGGTTGTGACCATTGCCATAAGGCCTTGGACTATGAGATTAGGTTCCCATTTGTATTCTATGAACTGTTTTGGAATAAAAAAGAATAACATAGATGGTTGAGACCTTGGTGTTCATGTTAGAGGTATTTGTTATGCCAAGCAGAAATTTTTCCCAGAGAAAGTGCATTCTTACTATTAAGACAGCAAAGTTCAGTTAAATGAGGATTAGGGTTGACATATTTAATGGCCATTTGGTGATGGAACTTCCCTGTGTTGTTGTGGCGTGATATGGAACTTCTTTTAAGCCTAGTTGACCTAATTTGGCATGCATGGATTTTCAGAAGTGCCAGGATAACATAGAACTTCCAGAAGCTTTTACTACATTAGGTTCCCTATTCTGGTCTCCGAAGATAATACTTCATTACTTGACATTTGAGTTCAGCTTGGTTTACGTGAAAAATGTGCTTCCACCCTTAGGTAATTATTGCATCGTTTCTGCAGGACTTTTAGTATGGCAGGAAGAAATCGCTCATCACGCCACATTGATGGTTACAGAGTTTCTCGTGATGTCCCTAGATCCTACATAGAACGAGTGCCAGCACCCCTGCCTATTCATCCTGCAGCTTTGGAGGAGGAACTTGAATTGCAACGTAGGGAAATGCAGAGAATTATTTCAGATAACCGCATGGTGATTGATGATAATACAGTACTTCAGAGGGAATTATCAGCTGCAAAGGAAGAAATTCACAGATTGAACCAGGTTATTCCCAAAATCGTGTCTGAGAAAGAATCACAATCCAGGGAGTTGCTTGAAAGAGGTTTGAAGCTAGAAGCTGAGCTTCGTGCTTCTGAGCCTTTAAAGTCTGAGGTTCTGCAATTAAGAGCTGAGATTCAGAAATTGAATACATTGAGGCAGGATTTGTCTGCTCAAGTCCAAAGCCTCACCAAGGATGTTAATCGATTGCAAGCTGAAAATCAGCAGCTAAATTCTATGAGAGCTGATATGGATGGATTGCACAAGGAGCTTATTGAAGCCAGGTTTGAAATGGAAATTTTAATTGATTGGCGTTGGATCCTAGTCTATGTTTTCTTCTTTTTCTGGTTAGGATTTGGCACTAGGACAGGTCAAGATAAATTCAAAACCACATTAATTAGTCTATTCCATGATTGAATTGATCGTGCACAATGTTTTTAGGAGGGCTTATGAATATGAAAAGAAAGCCAATGAAGAACAAATTGAACAAAAGCAATCAATGGAGAAGAACCTTGTTTCAATGGCTCGTGAAATAGAGAAACTGCGAGCAGAGAAGCTCAACATAGAGAGAGCACGGGGATTAGGTTATTTCTTTCTCTAATTTTTCTATTCTTTTCCTTTAACAAAATTATTGTCAACATGTGGACGTCTGGTTTCTTGCAACAACGGTAGCTAGTTGGTTTTAAGCTTCTGTTATACCTTTTTAGGTGCTGAGAATTATGGGATCTTGAACAGAAGTCCTGAAATGAGATATGCAGGTGGTGCATATGGTAGTAGCTATGGTAGTTCTTGGGCACCATATGAGAAGCGTACCCGACGTTAAGTTTCAACCTTTCTCTTAGATGTCCTTCATTGAAGTTCAATATCTGGTTTAACATCTTTACTTTTTCTGGAGAAGCTGCTTTTGAGAATTACCATGATCATGGTGTGAAGTATCAACTATCAACTAGTTAAGATTTGTAACTGTAGTACATTTTACTCTATGTGACTAAAGTTCTGCTTTCATTGCATTATACAATGAGTTATTTTTATTCAAGTTTATTTAGTGGCTGCAGTAGCAGAAATATACAGAGTAGATTGTTGGCTGGGAAAAACAGTCATTGACGTTTTTCAACTAATCCTTAAAAAAAGAAAAAAAAAGGTTTATGATGGTTACTCTGCAGAATTAGTAGAATAAATGTTGATTGGGAAGTTTAATTCTCGTGACAATTATTGGGCTGAATATATTTTGGGGGACATTGTGATTCTCATTCCTATATTGAGTTTCTCCAAAACATACGCTTGTATTGAGGGATCCAGTTCCTTGGCTTATGGAGAAGCTTTATATTGTGTTGGTTTCGTGAGTTATTTGATTGGCTTAAGTATAACTAGTACTCTTTTGTAAGATAAATATTTTGAACTTTTGATCACATGCCCATGTAAGTGAGTTGCTTGACATTGGTAGGCAAGAGTTGCTTGATAGTATTGTCATGTATGAAGACGTTCAGTTGCTTAGTTGGAGACAGGAACCCTATATTGGTCACAAGAGTTTTGAGAAGAGGTCCTGTCATGTTGAATGGTAGATATAAAAAGGCTACTCAGATATCTTTCTATACATCCACAAGTACCCTACTCTAGTATTTTTGTTATGTTCGTTGGATATGAAAGAGTTTCTATGTTTCTAATCAGATCAGTATGTTAAATGTCCTCTGTCAATTTTGACTATTCTCACTTCATAACTAAAATTACATTTATACCTCAACCGATGAAACTACTTGAAGTAGAGGCCCTACAGCAGAAGACCTATTTAGAAGGTGCTCATGAGGGAGAGGTTTGTGATAATTTCTGAATCTCTGACCTGTCCGGTTAACTGGTGAGCTGCAGAAGATATTATAAAGCCTGCGACCAGGATGATTTCCCATGCATTTTTATTCACTTCTCATCCGGTAAGTAGAGTGATCATGATCAGTAAGGACAATATTAGAATGTAACTTTTGCACAAATAGCTGAGAGATGGGGGTGGTTGTCAGTTGTCTAATCTTCTGCAGTCGCATTAAAAAGAAAAAAAAAACCTGGTTATGCTTTTTTTTTCTTTTTCTTTTTCTTTTGCCAGTGTTGTGCAAGTTTGATAGGAAATTTACAGTTAGAAAATGGGTGACTGAAGATACCAACCATGTATGTGATGCATTATTCAGTTTTGAAGTTTGCAATTTTGGAAGAATATTGCCCAATGAAGTCGCAGATTGAGGAAACGCTGCGACTGAATTGAATGTTAAGCTAGCTGGAGTGTTTTGTTTATGCTTGTAATTTTCTGTTTTACATGATTCTCACTTTTCATCTATTTTGTTCAATCTTTAAATAAAGTCAACAAGCTTTCTACTCTTTGAAATATCTCTACATTATTGTTATGATT

Coding sequence (CDS)

ATGGCAGGAAGAAATCGCTCATCACGCCACATTGATGGTTACAGAGTTTCTCGTGATGTCCCTAGATCCTACATAGAACGAGTGCCAGCACCCCTGCCTATTCATCCTGCAGCTTTGGAGGAGGAACTTGAATTGCAACGTAGGGAAATGCAGAGAATTATTTCAGATAACCGCATGGTGATTGATGATAATACAGTACTTCAGAGGGAATTATCAGCTGCAAAGGAAGAAATTCACAGATTGAACCAGGTTATTCCCAAAATCGTGTCTGAGAAAGAATCACAATCCAGGGAGTTGCTTGAAAGAGGTTTGAAGCTAGAAGCTGAGCTTCGTGCTTCTGAGCCTTTAAAGTCTGAGGTTCTGCAATTAAGAGCTGAGATTCAGAAATTGAATACATTGAGGCAGGATTTGTCTGCTCAAGTCCAAAGCCTCACCAAGGATGTTAATCGATTGCAAGCTGAAAATCAGCAGCTAAATTCTATGAGAGCTGATATGGATGGATTGCACAAGGAGCTTATTGAAGCCAGGTTTGAAATGGAAATTTTAATTGATTGGCGTTGGATCCTAGTCTATGTTTTCTTCTTTTTCTGGTTAGGATTTGGCACTAGGACAGGTCAAGATAAATTCAAAACCACATTAATTAGTCTATTCCATGATTGA

Protein sequence

MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEMEILIDWRWILVYVFFFFWLGFGTRTGQDKFKTTLISLFHD

Homology

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BLAST of Cucsat.G5938.T8 vs. ExPASy Swiss-Prot
Match: Q9C717 (Protein FLX-like 3 OS=Arabidopsis thaliana OX=3702 GN=FLXL3 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 82/189 (43.39%), Postives = 121/189 (64.02%), Query Frame = 0


Query: 1   MAGRNRSSRHI-DGYRVSRDVP--RSYIERVPAPLPIHPAALEE------ELELQRREMQ 60
           M+GRNR  R I D Y   RD+P  R ++   P   P  P+ LE+      E+  Q  E++
Sbjct: 1   MSGRNRIHRDIRDSYHDHRDLPPERPFLRGPPLLQPPPPSLLEDLQIQEGEIRRQDAEIR 60

Query: 61  RIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELR 120
           R++SDN  + DD  VL+REL AAKEE+HR+N +I  + +E++ Q RE  E+  KLE ++R
Sbjct: 61  RLLSDNHGLADDRMVLERELVAAKEELHRMNLMISDLRAEQDLQLREFSEKRHKLEGDVR 120

Query: 121 ASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKE 180
           A E  K E  QLR E+QKL+ ++++LS  VQ L KD+ +LQ++N+Q+  MRA++  L KE
Sbjct: 121 AMESYKKEASQLRGEVQKLDEIKRELSGNVQLLRKDLAKLQSDNKQIPGMRAEVKDLQKE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. ExPASy Swiss-Prot
Match: Q93V84 (Protein FLX-like 1 OS=Arabidopsis thaliana OX=3702 GN=FLXL1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.3e-15
Identity = 45/145 (31.03%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 32  LPIHPAALEEELELQRREMQRIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSE 91
           LP   + LE+ L  Q +++Q +++DN+ +   +  L++EL  A+ E+ R+   I  + +E
Sbjct: 63  LPPQFSILEDRLAAQNQDVQGLLADNQRLAATHVALKQELEVAQHELQRIMHYIDSLRAE 122

Query: 92  KESQSRELLERGLKLEAELRASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRL 151
           +E   RE+ ++ ++ E ELR  + +++E+ ++RA+I++  + RQ+L++QV  +T+D+ RL
Sbjct: 123 EEIMMREMYDKSMRSEMELREVDAMRAEIQKIRADIKEFTSGRQELTSQVHLMTQDLARL 182

Query: 152 QAENQQLNSMRADMDGLHKELIEAR 177
            A+ QQ+ ++ A+++   +EL  AR
Sbjct: 183 TADLQQIPTLTAEIENTKQELQRAR 207

[Close]

BLAST of Cucsat.G5938.T8 vs. ExPASy Swiss-Prot
Match: F4IMQ0 (Protein FLC EXPRESSOR OS=Arabidopsis thaliana OX=3702 GN=FLX PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 38/143 (26.57%), Postives = 89/143 (62.24%), Query Frame = 0


Query: 39  LEEELELQRREMQRIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRE 98
           LE+ + +Q RE+Q +++DN+ +   +  L+ +L+ AK E+ RL +   K+ +E E++ RE
Sbjct: 39  LEDRIAIQHREIQSLLNDNQRLAVAHIGLKDQLNVAKRELERLLETAVKVKAEGEAKVRE 98

Query: 99  LLERGLKLEAELRASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQL 158
           + +  L++EAE R  + L +E+ Q+R+++Q+L + RQ+L+ ++     ++ + +  + + 
Sbjct: 99  VYQNALRMEAEARVIDGLGAELGQVRSDVQRLGSDRQELATELAMFDDEMAKAKPNSDRA 158

Query: 159 NSMRADMDGLHKELIEARFEMEI 182
             ++ +++ L  E+ + R  +E+
Sbjct: 159 IEVKLEIEILRGEIRKGRAALEL 181

[Close]

BLAST of Cucsat.G5938.T8 vs. NCBI nr
Match: KAG7016704.1 (Protein FLX-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338 bits (867), Expect = 6.82e-115
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSY+ERVPAPLPIHPAALEEELELQ REMQRIISDNRMV
Sbjct: 61  MAGRNRSSRHIDGYRVSRDVPRSYVERVPAPLPIHPAALEEELELQHREMQRIISDNRMV 120

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNT+LQRELSAAKEEIHRLNQ IPK++SEKE+QSRELLERGLKLEAELRASEPLKSEV
Sbjct: 121 IDDNTILQRELSAAKEEIHRLNQAIPKVLSEKEAQSRELLERGLKLEAELRASEPLKSEV 180

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           L LR EIQKLN L+QDLSA+VQSLTKDV RLQAENQQLNSMRADMDGL KELIEARFEME
Sbjct: 181 LHLRGEIQKLNNLKQDLSAKVQSLTKDVTRLQAENQQLNSMRADMDGLLKELIEARFEME 240

Query: 181 ILIDWRWILVYVFFF 195
           ILIDW WILVYV FF
Sbjct: 241 ILIDWCWILVYVLFF 255

[Close]

BLAST of Cucsat.G5938.T8 vs. NCBI nr
Match: XP_011656524.1 (protein FLX-like 3 [Cucumis sativus] >XP_031743135.1 protein FLX-like 3 [Cucumis sativus] >KGN45961.1 hypothetical protein Csa_005285 [Cucumis sativus])

HSP 1 Score: 325 bits (834), Expect = 8.51e-110
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEAR   E
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARRAYE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. NCBI nr
Match: ADN34079.1 (hypothetical protein, partial [Cucumis melo subsp. melo])

HSP 1 Score: 319 bits (818), Expect = 1.17e-108
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEA 175
           LQLRAEIQKLNTLRQDLSAQVQSLTKDV RLQAENQQLNSMRAD+DGLHKELIEA
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVTRLQAENQQLNSMRADIDGLHKELIEA 175

[Close]

BLAST of Cucsat.G5938.T8 vs. NCBI nr
Match: XP_008445665.1 (PREDICTED: protein FLX-like 3 [Cucumis melo] >KAA0063899.1 protein FLX-like 3 [Cucumis melo var. makuwa] >TYK15906.1 protein FLX-like 3 [Cucumis melo var. makuwa])

HSP 1 Score: 322 bits (824), Expect = 2.83e-108
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           LQLRAEIQKLNTLRQDLSAQVQSLTKDV RLQAENQQLNSMRAD+DGLHKELIEAR   E
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVTRLQAENQQLNSMRADIDGLHKELIEARRAYE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. NCBI nr
Match: XP_038884141.1 (protein FLX-like 3 [Benincasa hispida])

HSP 1 Score: 316 bits (810), Expect = 3.81e-106
Identity = 171/180 (95.00%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNT+LQRELSAAKEEIHRLNQ IPKI+SEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTLLQRELSAAKEEIHRLNQAIPKILSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           LQLRAEIQKLNTLR+DLSAQVQ LTKDV RLQAENQQLNSMRADMDGLHKELIEAR   E
Sbjct: 121 LQLRAEIQKLNTLRKDLSAQVQGLTKDVTRLQAENQQLNSMRADMDGLHKELIEARRAYE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. ExPASy TrEMBL
Match: A0A0A0KDW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039520 PE=3 SV=1)

HSP 1 Score: 325 bits (834), Expect = 4.12e-110
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEAR   E
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARRAYE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. ExPASy TrEMBL
Match: E5GC80 (Uncharacterized protein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 319 bits (818), Expect = 5.67e-109
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEA 175
           LQLRAEIQKLNTLRQDLSAQVQSLTKDV RLQAENQQLNSMRAD+DGLHKELIEA
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVTRLQAENQQLNSMRADIDGLHKELIEA 175

[Close]

BLAST of Cucsat.G5938.T8 vs. ExPASy TrEMBL
Match: A0A5A7VEE6 (Protein FLX-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00050 PE=3 SV=1)

HSP 1 Score: 322 bits (824), Expect = 1.37e-108
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           LQLRAEIQKLNTLRQDLSAQVQSLTKDV RLQAENQQLNSMRAD+DGLHKELIEAR   E
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVTRLQAENQQLNSMRADIDGLHKELIEARRAYE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. ExPASy TrEMBL
Match: A0A1S3BCS2 (protein FLX-like 3 OS=Cucumis melo OX=3656 GN=LOC103488624 PE=3 SV=1)

HSP 1 Score: 322 bits (824), Expect = 1.37e-108
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           LQLRAEIQKLNTLRQDLSAQVQSLTKDV RLQAENQQLNSMRAD+DGLHKELIEAR   E
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVTRLQAENQQLNSMRADIDGLHKELIEARRAYE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. ExPASy TrEMBL
Match: A0A6J1E1V0 (protein FLX-like 3 OS=Momordica charantia OX=3673 GN=LOC111025204 PE=3 SV=1)

HSP 1 Score: 310 bits (795), Expect = 3.52e-104
Identity = 167/180 (92.78%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMV 60
           MAGRNRSSRHIDGYRVSRD PR YI+RVPAPLPIHPAALEEELELQRREM RIISDNRMV
Sbjct: 1   MAGRNRSSRHIDGYRVSRDAPRPYIDRVPAPLPIHPAALEEELELQRREMGRIISDNRMV 60

Query: 61  IDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEV 120
           IDDNT+LQRELSAAKEEIHRLNQ IPKI+SEKE+QSRELLERGLKLEAELRASEPLKSEV
Sbjct: 61  IDDNTILQRELSAAKEEIHRLNQAIPKILSEKEAQSRELLERGLKLEAELRASEPLKSEV 120

Query: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARFEME 180
           LQLRAEIQKLNTLRQDLSAQVQSLTKDV RLQAENQQLN+MRADMDGLHKELIEAR   E
Sbjct: 121 LQLRAEIQKLNTLRQDLSAQVQSLTKDVTRLQAENQQLNAMRADMDGLHKELIEARRAYE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. TAIR 10
Match: AT1G55170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). )

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 82/189 (43.39%), Postives = 121/189 (64.02%), Query Frame = 0


Query: 1   MAGRNRSSRHI-DGYRVSRDVP--RSYIERVPAPLPIHPAALEE------ELELQRREMQ 60
           M+GRNR  R I D Y   RD+P  R ++   P   P  P+ LE+      E+  Q  E++
Sbjct: 1   MSGRNRIHRDIRDSYHDHRDLPPERPFLRGPPLLQPPPPSLLEDLQIQEGEIRRQDAEIR 60

Query: 61  RIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELR 120
           R++SDN  + DD  VL+REL AAKEE+HR+N +I  + +E++ Q RE  E+  KLE ++R
Sbjct: 61  RLLSDNHGLADDRMVLERELVAAKEELHRMNLMISDLRAEQDLQLREFSEKRHKLEGDVR 120

Query: 121 ASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKE 180
           A E  K E  QLR E+QKL+ ++++LS  VQ L KD+ +LQ++N+Q+  MRA++  L KE
Sbjct: 121 AMESYKKEASQLRGEVQKLDEIKRELSGNVQLLRKDLAKLQSDNKQIPGMRAEVKDLQKE 180

[Close]

BLAST of Cucsat.G5938.T8 vs. TAIR 10
Match: AT3G14750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 3.8e-16
Identity = 45/145 (31.03%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 32  LPIHPAALEEELELQRREMQRIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSE 91
           LP   + LE+ L  Q +++Q +++DN+ +   +  L++EL  A+ E+ R+   I  + +E
Sbjct: 63  LPPQFSILEDRLAAQNQDVQGLLADNQRLAATHVALKQELEVAQHELQRIMHYIDSLRAE 122

Query: 92  KESQSRELLERGLKLEAELRASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRL 151
           +E   RE+ ++ ++ E ELR  + +++E+ ++RA+I++  + RQ+L++QV  +T+D+ RL
Sbjct: 123 EEIMMREMYDKSMRSEMELREVDAMRAEIQKIRADIKEFTSGRQELTSQVHLMTQDLARL 182

Query: 152 QAENQQLNSMRADMDGLHKELIEAR 177
            A+ QQ+ ++ A+++   +EL  AR
Sbjct: 183 TADLQQIPTLTAEIENTKQELQRAR 207

[Close]

BLAST of Cucsat.G5938.T8 vs. TAIR 10
Match: AT2G30120.2 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 2527 Blast hits to 2101 proteins in 358 species: Archae - 77; Bacteria - 245; Metazoa - 1087; Fungi - 215; Plants - 350; Viruses - 4; Other Eukaryotes - 549 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 38/143 (26.57%), Postives = 89/143 (62.24%), Query Frame = 0


Query: 39  LEEELELQRREMQRIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRE 98
           LE+ + +Q RE+Q +++DN+ +   +  L+ +L+ AK E+ RL +   K+ +E E++ RE
Sbjct: 39  LEDRIAIQHREIQSLLNDNQRLAVAHIGLKDQLNVAKRELERLLETAVKVKAEGEAKVRE 98

Query: 99  LLERGLKLEAELRASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQL 158
           + +  L++EAE R  + L +E+ Q+R+++Q+L + RQ+L+ ++     ++ + +  + + 
Sbjct: 99  VYQNALRMEAEARVIDGLGAELGQVRSDVQRLGSDRQELATELAMFDDEMAKAKPNSDRA 158

Query: 159 NSMRADMDGLHKELIEARFEMEI 182
             ++ +++ L  E+ + R  +E+
Sbjct: 159 IEVKLEIEILRGEIRKGRAALEL 181

[Close]

BLAST of Cucsat.G5938.T8 vs. TAIR 10
Match: AT2G30120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 37/138 (26.81%), Postives = 86/138 (62.32%), Query Frame = 0


Query: 39  LEEELELQRREMQRIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRE 98
           LE+ + +Q RE+Q +++DN+ +   +  L+ +L+ AK E+ RL +   K+ +E E++ RE
Sbjct: 39  LEDRIAIQHREIQSLLNDNQRLAVAHIGLKDQLNVAKRELERLLETAVKVKAEGEAKVRE 98

Query: 99  LLERGLKLEAELRASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQL 158
           + +  L++EAE R  + L +E+ Q+R+++Q+L + RQ+L+ ++     ++ + +  + + 
Sbjct: 99  VYQNALRMEAEARVIDGLGAELGQVRSDVQRLGSDRQELATELAMFDDEMAKAKPNSDRA 158

Query: 159 NSMRADMDGLHKELIEAR 177
             ++ +++ L  E+ + R
Sbjct: 159 IEVKLEIEILRGEIRKGR 176

[Close]

BLAST of Cucsat.G5938.T8 vs. TAIR 10
Match: AT4G00380.1 (XH/XS domain-containing protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 38/162 (23.46%), Postives = 76/162 (46.91%), Query Frame = 0


Query: 7   SSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMVIDDNTV 66
           S RHI      ++  R+ ++R    L      LE+   L   E Q++  D R     +  
Sbjct: 310 SLRHIQRILYDKEKLRNELDRKMRDLESRAKQLEKHEALTELERQKLDEDKR----KSDA 369

Query: 67  LQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEVLQLRAE 126
           + + L  A  E  + ++ + ++V E + Q  + L + L LE +L   + L+ E+ +L+ +
Sbjct: 370 MNKSLQLASREQKKADESVLRLVEEHQRQKEDALNKILLLEKQLDTKQTLEMEIQELKGK 429

Query: 127 IQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGL 169
           +Q +  L  D    VQ+  K++      N +L+  +A+++ L
Sbjct: 430 LQVMKHLGDDDDEAVQTKMKEM------NDELDDKKAELEDL 461

The following BLAST results are available for this feature:

BLAST of Cucsat.G5938.T8 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C717	1.7e-29	43.39	Protein FLX-like 3 OS=Arabidopsis thaliana OX=3702 GN=FLXL3 PE=1 SV=1	[more]
Q93V84	5.3e-15	31.03	Protein FLX-like 1 OS=Arabidopsis thaliana OX=3702 GN=FLXL1 PE=1 SV=1	[more]
F4IMQ0	2.3e-10	26.57	Protein FLC EXPRESSOR OS=Arabidopsis thaliana OX=3702 GN=FLX PE=1 SV=1	[more]

BLAST of Cucsat.G5938.T8 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016704.1	6.82e-115	91.79	Protein FLX-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011656524.1	8.51e-110	98.33	protein FLX-like 3 [Cucumis sativus] >XP_031743135.1 protein FLX-like 3 [Cucumis...	[more]
ADN34079.1	1.17e-108	98.86	hypothetical protein, partial [Cucumis melo subsp. melo]	[more]
XP_008445665.1	2.83e-108	97.22	PREDICTED: protein FLX-like 3 [Cucumis melo] >KAA0063899.1 protein FLX-like 3 [C...	[more]
XP_038884141.1	3.81e-106	95.00	protein FLX-like 3 [Benincasa hispida]	[more]

BLAST of Cucsat.G5938.T8 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDW1	4.12e-110	98.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039520 PE=3 SV=1	[more]
E5GC80	5.67e-109	98.86	Uncharacterized protein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=3 SV...	[more]
A0A5A7VEE6	1.37e-108	97.22	Protein FLX-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00...	[more]
A0A1S3BCS2	1.37e-108	97.22	protein FLX-like 3 OS=Cucumis melo OX=3656 GN=LOC103488624 PE=3 SV=1	[more]
A0A6J1E1V0	3.52e-104	92.78	protein FLX-like 3 OS=Momordica charantia OX=3673 GN=LOC111025204 PE=3 SV=1	[more]

BLAST of Cucsat.G5938.T8 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55170.1	1.2e-30	43.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G14750.1	3.8e-16	31.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G30120.2	1.6e-11	26.57	unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth ...	[more]
AT2G30120.1	6.2e-11	26.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G00380.1	1.5e-04	23.46	XH/XS domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	COILS	Coil	Coil	coord: 120..171
None	No IPR available	PANTHER	PTHR33405:SF19	MYOSIN-LIKE PROTEIN	coord: 1..180
None	No IPR available	SUPERFAMILY	90257	Myosin rod fragments	coord: 106..182
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 14..186 e-value: 1.4E-5 score: 26.8
IPR040353	FLC EXPRESSOR/FLX-like	PANTHER	PTHR33405	PROTEIN FLX-LIKE 2	coord: 1..180

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G5938	Cucsat.G5938	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G5938.T8.E1	Cucsat.G5938.T8.E1	exon
Cucsat.G5938.T8.E2	Cucsat.G5938.T8.E2	exon
Cucsat.G5938.T8.E3	Cucsat.G5938.T8.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G5938.T8.C1	Cucsat.G5938.T8.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G5938.T8	Cucsat.G5938.T8-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation