
Cucsat.G5938.T14 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAAGGTGTAAAATGGGCCGATGGAACTTTGAACTTTTGAAACAATCAGTTGATGAACGAAAACTTGCCCTAGGGTTCCCAATTTTCCTTACCTGAACCCCTAAACCTTTCCCTCTCGGAGATTACACCATTTCGCTTCTCCCTTTACTTCGTGTAAGTTCCTCTTCCTTCTTCTTCTTCCATTTTAATCGCAAAATCGTCAGCCTCTCCCCATGGAGCAAAGGGGTTTTCGCCGTTTTCTTCTGAAACCATTGATTTTCTTTGCTCATCTTTTCGTGTTTCCGATGTTCGAAATTTTCGTCTTTCCTCTGTTTCCTTAAAACAACTCCATCCATCCAAGGAGGAAGCGTTATATATTGTTATTATTGTTATTATTATTTTTGTTTGTAGCTGTGTTTATACATGTACGCATACGTTTTTAACGTTTCTGTGTTGTGTTTTCGATTGCGAAAGTGCTAGGTTCTTCTCCGGGTGAGTATTGTTTAGGTAACCTACTCAATCCCTCCTCTTTTCTCTGTATGATAATTTTTTTCGGGAAATTTGTGTCAAAGGCAATCAAAATTTTGTGAGTTCGATACAAACATCTTGGCGTTTGTTGATTTCAAATATGTGCTTTCCTTCAAATGAGAGAGGAAGATACCTTCTCACTGAATGACCCTTTTCGAAGTTTAAGCACTGGGCTTGGAAAGAGTTTGGACTTCACAACTATGTAAGCGATGGCATGGTCGAAAATGTTCTATCAATTGAAACTGTTTGGGGAAGGAGAAGCATTGGAAATAAAATGAGTGAGGTTAGACTTGAACAACTAATGATTTAAGAAAACAAAGAGACCTTGACAATGAGGCTTGTGGCTGTGCTGTGGAGAAATTCTAGAACTGGGTGCTATTAATTTGGACAGTCTAAGAACTGTATGATTAGGTTCCAGAGGCATGCTGTATGTTCTTTTGGAATGGTGTTTCTCAAATAACGTTCACCCAATCAGTTTTTTTTTTTTTTTTCTTAAATGGTCATTTTACAAAGTTGATACTGAAGTAGCTGTATTGGTATTTACTGAAGAAATTTTTGGTGGTCCTTGGAGTAATTTGAAGTACCTTTTGGATCCAGACGCAATACAAAGAGAGGAATTTTGCTGCTAGGCCTTCCCCAATCAACTTATTTATATCTAGATAGCAAGATGCAAAGGAAGTTTTGAGAGCTTCCTACCTCCTATTTCTCAAAGAGAACTAGAATTTACAAAGTAAAAGATATTGTAGTACAACAACTAAAGAAACTTACATATACCCCTCCAAGACCACTCAGCGTAATGGTTTACAGGGGACCACAAACACTAGTAATAAACTCTCTTTCTTCCCTTCAGCTTACGTGCCTCCTATCCTTTCCTTCTTCTTGCTTAGACAGACTTTAGTGATTAGGGGATTATAATTACCCACGACCAAATGAGCCACCATGTTCTCAAGGTACAAATTTGGAAATTGGGCTTGAATGGTGGACACAATCTCCCATGCGGCATCTGCCTGAGTAGCTTAAGATCCCAACGAATAAACACCTCCAATTCTCCCCTCATAGAAGGAGAAACATAGGAAAATTCTAGCCCATCGCCTTTTGGAGAAGGCTCGCATGAAGCATGGGATGAATCTTTACCATGTCATCAGACCTAATTTAGTCATAATCTGAAAAAGGCCAATAAAACATGGAGCTAACTTGGGATGGTTGTGTTGAAAAATGAAGGTTGCTGTTACAACCTTAATTTAAAATAAACCTACTGATCGACCTCAACATGCAAATCCCGTTGTTTTTTATTGGTTATATCTGCCAATAATTGCTAAGTTTGCAGCAATGATGCCTTCCAAGTATTCAACGTCGCATCTCTGTCTCAGAGTTGAACATCAACCTCGGAAACTACATATAAATCAGCATGTAGGGAATGATAGGGGTGGCGGCCAACCACAAACTACTTCACAAGGGGTAGGTTGTCTTAGTAGATTATGTTAAGTGATGTTGTAGCTTAAGTCCACCCAAGGAATCCATTTGTGCTCCACTTTGACAGGGACAACGAATAACGAACCCTCTCTTCCCAAAGCTCACAAGCCACCTATCTTTCCCTTCATGCGTAGACCGTAGTACTTATCATTTCTCTTCTTGTTTTTTACTTTTCGTGATTTGTAGAAATTGATTACATTGTGCATCTTTAAGCCTTCTTTTGAAGGCCTCTTGAACGATTGCTTAGCTGTTCATTGTAGTTTTCTGTTACTAATTAAAAACCCAAATCCTCCCTTCACGCAGTTGGACAAAACTTAGGTGTCCATCTTGAGATGTTTTCTAGTGGAACATTCGTATTAGGTTTATATTAGTTCCCGTTGATCTTGTTTACCAAAATAGGCGGCTGAGTTCTCTTCATGAGGTGAACGAAGGATGGCCATTGATAATTTCTCATCATTCTTTTAGTCATATACTCATTCAATACTAAGGTCACATCCGGTTGTGACCATTGCCATAAGGCCTTGGACTATGAGATTAGGTTCCCATTTGTATTCTATGAACTGTTTTGGAATAAAAAAGAATAACATAGATGGTTGAGACCTTGGTGTTCATGTTAGAGGTATTTGTTATGCCAAGCAGAAATTTTTCCCAGAGAAAGTGCATTCTTACTATTAAGACAGCAAAGTTCAGTTAAATGAGGATTAGGGTTGACATATTTAATGGCCATTTGGTGATGGAACTTCCCTGTGTTGTTGTGGCGTGATATGGAACTTCTTTTAAGCCTAGTTGACCTAATTTGGCATGCATGGATTTTCAGAAGTGCCAGGATAACATAGAACTTCCAGAAGCTTTTACTACATTAGGTTCCCTATTCTGGTCTCCGAAGATAATACTTCATTACTTGACATTTGAGTTCAGCTTGGTTTACGTGAAAAATGTGCTTCCACCCTTAGGTAATTATTGCATCGTTTCTGCAGGACTTTTAGTATGGCAGGAAGAAATCGCTCATCACGCCACATTGATGGTTACAGAGTTTCTCGTGATGTCCCTAGATCCTACATAGAACGAGTGCCAGCACCCCTGCCTATTCATCCTGCAGCTTTGGAGGAGGAACTTGAATTGCAACGTAGGGAAATGCAGAGAATTATTTCAGATAACCGCATGGTGATTGATGATAATACAGTACTTCAGAGGGAATTATCAGCTGCAAAGGAAGAAATTCACAGATTGAACCAGGTTATTCCCAAAATCGTGTCTGAGAAAGAATCACAATCCAGGGAGTTGCTTGAAAGAGGTTTGAAGCTAGAAGCTGAGCTTCGTGCTTCTGAGCCTTTAAAGTCTGAGGTTCTGCAATTAAGAGCTGAGATTCAGAAATTGAATACATTGAGGCAGGATTTGTCTGCTCAAGTCCAAAGCCTCACCAAGGATGTTAATCGATTGCAAGCTGAAAATCAGCAGCTAAATTCTATGAGAGCTGATATGGATGGATTGCACAAGGAGCTTATTGAAGCCAGGTTTGAAATGGAAATTTTAATTGATTGGCGTTGGATCCTAGTCTATGTTTTCTTCTTTTTCTGGTTAGGATTTGGCACTAGGACAGGTCAAGATAAATTCAAAACCACATTAATTAGTCTATTCCATGATTGAATTGATCGTGCACAATGTTTTTAGGAGGGCTTATGAATATGAAAAGAAAGCCAATGAAGAACAAATTGAACAAAAGCAATCAATGGAGAAGAACCTTGTTTCAATGGCTCGTGAAATAGAGAAACTGCGAGCAGAGAAGCTCAACATAGAGAGAGCACGGGGATTAGGTTATTTCTTTCTCTAATTTTTCTATTCTTTTCCTTTAACAAAATTATTGTCAACATGTGGACGTCTGGTTTCTTGCAACAACGGTAGCTAGTTGGTTTTAAGCTTCTGTTATACCTTTTTAGGTGCTGAGAATTATGGGATCTTGAACAGAAGTCCTGAAATGAGATATGCAGGTGGTGCATATGGTAGTAGCTATGGTAGTTCTTGGGCACCATATGAGAAGCGTACCCGACGTTAAGTTTCAACCTTTCTCTTAGATGTCCTTCATTGAAGTTCAATATCTGGTTTAACATCTTTACTTTTTCTGGAGAAGCTGCTTTTGAGAATTACCATGATCATGGTGTGAAGTATCAACTATCAACTAGTTAAGATTTGTAACTGTAGTACATTTTACTCTATGTGACTAAAGTTCTGCTTTCATTGCATTATACAATGAGTTATTTTTATTCAAGTTTATTTAGTGGCTGCAGTAGCAGAAATATACAGAGTAGATTGTTGGCTGGGAAAAACAGTCATTGACGTTTTTCAACTAATCCTTAAAAAAAGAAAAAAAAAGGTTTATGATGGTTACTCTGCAGAATTAGTAGAATAAATGTTGATTGGGAAGTTTAATTCTCGTGACAATTATTGGGCTGAATATATTTTGGGGGACATTGTGATTCTCATTCCTATATTGAGTTTCTCCAAAACATACGCTTGTATTGAGGGATCCAGTTCCTTGGCTTATGGAGAAGCTTTATATTGTGTTGGTTTCGTGAGTTATTTGATTGGCTTAAGTATAACTAGTACTCTTTTGTAAGATAAATATTTTGAACTTTTGATCACATGCCCATGTAAGTGAGTTGCTTGACATTGGTAGGCAAGAGTTGCTTGATAGTATTGTCATGTATGAAGACGTTCAGTTGCTTAGTTGGAGACAGGAACCCTATATTGGTCACAAGAGTTTTGAGAAGAGGTCCTGTCATGTTGAATGGTAGATATAAAAAGGCTACTCAGATATCTTTCTATACATCCACAAGTACCCTACTCTAGTATTTTTGTTATGTTCGTTGGATATGAAAGAGTTTCTATGTTTCTAATCAGATCAGTATGTTAAATGTCCTCTGTCAATTTTGACTATTCTCACTTCATAACTAAAATTACATTTATACCTCAACCGATGAAACTACTTGAAGTAGAGGCCCTACAGCAGAAGACCTATTTAGAAGGTGCTCATGAGGGAGAGGTTTGTGATAATTTCTGAATCTCTGACCTGTCCGGTTAACTGGTGAGCTGCAGAAGATATTATAAAGCCTGCGACCAGGATGATTTCCCATGCATTTTTATTCACTTCTCATCCGGTAAGTAGAGTGATCATGATCAGTAAGGACAATATTAGAATGTAACTTTTGCACAAATAGCTGAGAGATGGGGGTGGTTGTCAGTTGTCTAATCTTCTGCAGTCGCATTAAAAAGAAAAAAAAAACCTGGTTATGCTTTTTTTTTCTTTTTCTTTTTCTTTTGCCAGTGTTGTGCAAGTTTGATAGGAAATTTACAGTTAGAAAATGGGTGACTGAAGATACCAACCATGTATGTGATGCATTATTCAGTTTTGAAGTTTGCAATTTTGGAAGAATATTGCCCAA ATGGCAGGAAGAAATCGCTCATCACGCCACATTGATGGTTACAGAGTTTCTCGTGATGTCCCTAGATCCTACATAGAACGAGTGCCAGCACCCCTGCCTATTCATCCTGCAGCTTTGGAGGAGGAACTTGAATTGCAACGTAGGGAAATGCAGAGAATTATTTCAGATAACCGCATGGTGATTGATGATAATACAGTACTTCAGAGGGAATTATCAGCTGCAAAGGAAGAAATTCACAGATTGAACCAGGTTATTCCCAAAATCGTGTCTGAGAAAGAATCACAATCCAGGGAGTTGCTTGAAAGAGGTTTGAAGCTAGAAGCTGAGCTTCGTGCTTCTGAGCCTTTAAAGTCTGAGGTTCTGCAATTAAGAGCTGAGATTCAGAAATTGAATACATTGAGGCAGGATTTGTCTGCTCAAGTCCAAAGCCTCACCAAGGATGTTAATCGATTGCAAGCTGAAAATCAGCAGCTAAATTCTATGAGAGCTGATATGGATGGATTGCACAAGGAGCTTATTGAAGCCAGGAGGGCTTATGAATATGAAAAGAAAGCCAATGAAGAACAAATTGAACAAAAGCAATCAATGGAGAAGAACCTTGTTTCAATGGCTCGTGAAATAGAGAAACTGCGAGCAGAGAAGCTCAACATAGAGAGAGCACGGGGATTAGGTTATTTCTTTCTCTAA MAGRNRSSRHIDGYRVSRDVPRSYIERVPAPLPIHPAALEEELELQRREMQRIISDNRMVIDDNTVLQRELSAAKEEIHRLNQVIPKIVSEKESQSRELLERGLKLEAELRASEPLKSEVLQLRAEIQKLNTLRQDLSAQVQSLTKDVNRLQAENQQLNSMRADMDGLHKELIEARRAYEYEKKANEEQIEQKQSMEKNLVSMAREIEKLRAEKLNIERARGLGYFFL Homology
BLAST of Cucsat.G5938.T14 vs. ExPASy Swiss-Prot
Match: Q9C717 (Protein FLX-like 3 OS=Arabidopsis thaliana OX=3702 GN=FLXL3 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.0e-42 Identity = 110/234 (47.01%), Postives = 155/234 (66.24%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy Swiss-Prot
Match: Q93V84 (Protein FLX-like 1 OS=Arabidopsis thaliana OX=3702 GN=FLXL1 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24 Identity = 68/187 (36.36%), Postives = 121/187 (64.71%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy Swiss-Prot
Match: Q84TD8 (Protein FLX-like 2 OS=Arabidopsis thaliana OX=3702 GN=FLXL2 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-22 Identity = 64/181 (35.36%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy Swiss-Prot
Match: F4IMQ0 (Protein FLC EXPRESSOR OS=Arabidopsis thaliana OX=3702 GN=FLX PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15 Identity = 52/180 (28.89%), Postives = 109/180 (60.56%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. NCBI nr
Match: XP_011656524.1 (protein FLX-like 3 [Cucumis sativus] >XP_031743135.1 protein FLX-like 3 [Cucumis sativus] >KGN45961.1 hypothetical protein Csa_005285 [Cucumis sativus]) HSP 1 Score: 405 bits (1042), Expect = 2.62e-141 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. NCBI nr
Match: XP_008445665.1 (PREDICTED: protein FLX-like 3 [Cucumis melo] >KAA0063899.1 protein FLX-like 3 [Cucumis melo var. makuwa] >TYK15906.1 protein FLX-like 3 [Cucumis melo var. makuwa]) HSP 1 Score: 400 bits (1029), Expect = 2.51e-139 Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. NCBI nr
Match: XP_038884141.1 (protein FLX-like 3 [Benincasa hispida]) HSP 1 Score: 395 bits (1015), Expect = 3.40e-137 Identity = 217/224 (96.88%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. NCBI nr
Match: XP_022158741.1 (protein FLX-like 3 [Momordica charantia]) HSP 1 Score: 389 bits (1000), Expect = 6.55e-135 Identity = 213/224 (95.09%), Postives = 219/224 (97.77%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. NCBI nr
Match: XP_022960852.1 (protein FLX-like 3 [Cucurbita moschata] >XP_022960860.1 protein FLX-like 3 [Cucurbita moschata] >XP_022960869.1 protein FLX-like 3 [Cucurbita moschata] >XP_022960879.1 protein FLX-like 3 [Cucurbita moschata] >XP_022960887.1 protein FLX-like 3 [Cucurbita moschata] >XP_022960895.1 protein FLX-like 3 [Cucurbita moschata] >XP_022960901.1 protein FLX-like 3 [Cucurbita moschata] >XP_022960907.1 protein FLX-like 3 [Cucurbita moschata] >KAG7032502.1 Protein FLX-like 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380 bits (977), Expect = 2.08e-131 Identity = 207/224 (92.41%), Postives = 218/224 (97.32%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy TrEMBL
Match: A0A0A0KDW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039520 PE=3 SV=1) HSP 1 Score: 405 bits (1042), Expect = 1.27e-141 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy TrEMBL
Match: A0A5A7VEE6 (Protein FLX-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00050 PE=3 SV=1) HSP 1 Score: 400 bits (1029), Expect = 1.21e-139 Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy TrEMBL
Match: A0A1S3BCS2 (protein FLX-like 3 OS=Cucumis melo OX=3656 GN=LOC103488624 PE=3 SV=1) HSP 1 Score: 400 bits (1029), Expect = 1.21e-139 Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy TrEMBL
Match: A0A6J1E1V0 (protein FLX-like 3 OS=Momordica charantia OX=3673 GN=LOC111025204 PE=3 SV=1) HSP 1 Score: 389 bits (1000), Expect = 3.17e-135 Identity = 213/224 (95.09%), Postives = 219/224 (97.77%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. ExPASy TrEMBL
Match: A0A6J1H8N2 (protein FLX-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111461532 PE=3 SV=1) HSP 1 Score: 380 bits (977), Expect = 1.01e-131 Identity = 207/224 (92.41%), Postives = 218/224 (97.32%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. TAIR 10
Match: AT1G55170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). ) HSP 1 Score: 172.9 bits (437), Expect = 2.9e-43 Identity = 110/234 (47.01%), Postives = 155/234 (66.24%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. TAIR 10
Match: AT3G14750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). ) HSP 1 Score: 114.0 bits (284), Expect = 1.6e-25 Identity = 68/187 (36.36%), Postives = 121/187 (64.71%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. TAIR 10
Match: AT1G67170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink). ) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23 Identity = 64/181 (35.36%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. TAIR 10
Match: AT2G30120.2 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 2527 Blast hits to 2101 proteins in 358 species: Archae - 77; Bacteria - 245; Metazoa - 1087; Fungi - 215; Plants - 350; Viruses - 4; Other Eukaryotes - 549 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16 Identity = 52/180 (28.89%), Postives = 109/180 (60.56%), Query Frame = 0
BLAST of Cucsat.G5938.T14 vs. TAIR 10
Match: AT2G30120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10 Identity = 37/138 (26.81%), Postives = 86/138 (62.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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