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Cucsat.G5865.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CATTCCCATTTGATTATTTCCAAAAAAAAAAAAAAAAAAGTTTAATTTGATGACCGTTGAATTTTCCCCAATTCACCATATTTCGAAGTCGTCTTCTCTCTCCCAAACCCAACAAATCCATCACTCTCTCTGCAAAATTCAATCTTCTGCTTAAGAAACCACACCACAATCTCAAAATCAGAGATGGGTTTTCAAAAGGAAGACAATTCAACAAAGATTTTGAGAGCTTTGAAGACCTTATTCTTCTTAATCACTATTCTCTTATCTCTCCTTTTCTTCTCTGCTCCAATTCTTCTCGCCATCGCCGATGCTCTTCTTCCTTCAGCTCTACTCTCCACCCTCCTTCATCCCGATTCCCTTTCCTTCAAATCTCTCTCTTCCCATCTCCAAAACTACCATTTCTCTTCCTCTCTTGTTGACATTCCCCTCATCTCTATTTCCAGATCCGCCATTCTCATCTGTAAGACATTAAAGAAAAAAAAAACAGAGCAATTGAAATCGGCCGAGTGGTTTTAACAGGGCTCTGTTTTTTCTTGTGTAGGTTTTTACAGTTTGTGCAATGGTCCTAAGCTATCTCGAGGGCCATATTTAGCGGCGGTGATGGCTTGTTCTTTGATATCAGTGGCTTTTGTTGCGGTGAAAGCTTGGTGTGTGTTTGGTGAGATGATGACGAGTAAGGGAGAAAGAGCCATGGAAATGGGTCTGTTTATTTGTTCTCTGTTTTTGGGTGTTGCTCATATTGTTGTGGCGTACAGAGGTAGTTGCAGAGAAAGAAGGAAGCTTAGAGTTTATGAAATCGACATTGAAGCTGTAAGAATTTCTATCTTTTGCTTCAAATTTAAGTCTAATTTTGAGATTATGTTAGTTTGTGTAATAATACATTTTTTCTTACTTTCTAATTCATAATGTTGGGGTTAAGTTGAAACTGAGGATCTTAGTTTGGTCCAATTTGAACCGAAAATTATTCTTAATACAGGCAAAAATAGAAAAAAAAAAATGATAATAGAAACACGCATTTTCTAAATTACAAAATTAATAAATTTAAAAGTTCATGTCTCTTTTTACCATGGTTGATATCACTAATTACTTGTCATATTTGCGATAGGTAAAAAAGAGGTGTCGTGACTTTTTTTTTAAAATGTTTTTGCAATTTCCTAATCTAATATTTGAAAAATGATTCAAACTTATGAACGATAGGAAATTTTGATTTTTTTAGTCCTAAATGATGAGAAATGTGTTATATATGTTTACTATTTAAATATTCAAAATATTCCTTTTGACTTACTTTCTAAATCAATTTTCAAAATTTGAGAACTAACGATATACATTTTAAAATTTTATGGACCAAATGAATTTATTTTTCTAAATTTGAGCATTGAAAAATACACACTTTTTAAAACTCATAAACTAAATAGGACAAAAAGAGTTAAAACCATTCGAATATATATCTATAAGTTAATGAAAGTCAATCAAAACGAAATGGAAAATGCATTTATCCGTCCTCATCTAAGAAGTGTGTATAAACTAAAATTAAATATTAAAAAATATAGAATTTGAAATTAACAAAACAAAATTTTTATTTTAACCTAACTTTTTTTACTCCTTAAAATGCTTTACAAAAAAACTTTGAATTTTGTGAAACTTGAGTATTGATGTTCTTGCCTTATATGCAGGTTTGGGCATGCCATCAAGGGCTCCTACGTTACAAAAACATTGCTTTGGAAGGAAAAAACTATAATATAAATTCAATGTAAGGCATGTTATGTTACCGATGACATATTGTAAAACAACCAAGACCAGCTCAAATGTCGACAAAGAGCATAAATTTATGATAAAGCCAATAATGTATATACTACTTTTTCAATAGACTGTGATATTT ATGGGTTTTCAAAAGGAAGACAATTCAACAAAGATTTTGAGAGCTTTGAAGACCTTATTCTTCTTAATCACTATTCTCTTATCTCTCCTTTTCTTCTCTGCTCCAATTCTTCTCGCCATCGCCGATGCTCTTCTTCCTTCAGCTCTACTCTCCACCCTCCTTCATCCCGATTCCCTTTCCTTCAAATCTCTCTCTTCCCATCTCCAAAACTACCATTTCTCTTCCTCTCTTGTTGACATTCCCCTCATCTCTATTTCCAGATCCGCCATTCTCATCTGTTTTTACAGTTTGTGCAATGGTCCTAAGCTATCTCGAGGGCCATATTTAGCGGCGGTGATGGCTTGTTCTTTGATATCAGTGGCTTTTGTTGCGGTGAAAGCTTGGTGTGTGTTTGGTGAGATGATGACGAGTAAGGGAGAAAGAGCCATGGAAATGGGTCTGTTTATTTGTTCTCTGTTTTTGGGTGTTGCTCATATTGTTGTGGCGTACAGAGGTAGTTGCAGAGAAAGAAGGAAGCTTAGAGTTTATGAAATCGACATTGAAGCTGTTTGGGCATGCCATCAAGGGCTCCTACGTTACAAAAACATTGCTTTGGAAGGAAAAAACTATAATATAAATTCAATGTAA MGFQKEDNSTKILRALKTLFFLITILLSLLFFSAPILLAIADALLPSALLSTLLHPDSLSFKSLSSHLQNYHFSSSLVDIPLISISRSAILICFYSLCNGPKLSRGPYLAAVMACSLISVAFVAVKAWCVFGEMMTSKGERAMEMGLFICSLFLGVAHIVVAYRGSCRERRKLRVYEIDIEAVWACHQGLLRYKNIALEGKNYNINSM Homology
BLAST of Cucsat.G5865.T2 vs. NCBI nr
Match: XP_004138423.1 (uncharacterized protein LOC101204114 [Cucumis sativus] >KAE8646564.1 hypothetical protein Csa_005175 [Cucumis sativus]) HSP 1 Score: 397 bits (1021), Expect = 2.78e-139 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. NCBI nr
Match: XP_038886178.1 (uncharacterized protein LOC120076428 [Benincasa hispida]) HSP 1 Score: 310 bits (795), Expect = 3.03e-104 Identity = 166/201 (82.59%), Postives = 179/201 (89.05%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. NCBI nr
Match: XP_022938963.1 (uncharacterized protein LOC111445015 [Cucurbita moschata]) HSP 1 Score: 276 bits (705), Expect = 3.22e-91 Identity = 152/201 (75.62%), Postives = 167/201 (83.08%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. NCBI nr
Match: XP_023550823.1 (uncharacterized protein LOC111808852 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275 bits (703), Expect = 6.48e-91 Identity = 152/201 (75.62%), Postives = 166/201 (82.59%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. NCBI nr
Match: XP_022993220.1 (uncharacterized protein LOC111489306 [Cucurbita maxima]) HSP 1 Score: 275 bits (702), Expect = 9.20e-91 Identity = 151/201 (75.12%), Postives = 166/201 (82.59%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. ExPASy TrEMBL
Match: A0A0A0KBM0 (Anthranilate synthase OS=Cucumis sativus OX=3659 GN=Csa_6G011620 PE=3 SV=1) HSP 1 Score: 396 bits (1017), Expect = 3.63e-131 Identity = 207/208 (99.52%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. ExPASy TrEMBL
Match: A0A6J1FKD1 (uncharacterized protein LOC111445015 OS=Cucurbita moschata OX=3662 GN=LOC111445015 PE=4 SV=1) HSP 1 Score: 276 bits (705), Expect = 1.56e-91 Identity = 152/201 (75.62%), Postives = 167/201 (83.08%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. ExPASy TrEMBL
Match: A0A6J1JXZ7 (uncharacterized protein LOC111489306 OS=Cucurbita maxima OX=3661 GN=LOC111489306 PE=4 SV=1) HSP 1 Score: 275 bits (702), Expect = 4.45e-91 Identity = 151/201 (75.12%), Postives = 166/201 (82.59%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. ExPASy TrEMBL
Match: A0A6J1BXV2 (uncharacterized protein LOC111006459 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006459 PE=4 SV=1) HSP 1 Score: 244 bits (622), Expect = 8.79e-79 Identity = 140/209 (66.99%), Postives = 165/209 (78.95%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. ExPASy TrEMBL
Match: A0A7N2MGD8 (MENTAL domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 236 bits (601), Expect = 1.01e-75 Identity = 130/199 (65.33%), Postives = 151/199 (75.88%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. TAIR 10
Match: AT2G40095.1 (Alpha/beta hydrolase related protein ) HSP 1 Score: 190.3 bits (482), Expect = 1.6e-48 Identity = 112/209 (53.59%), Postives = 138/209 (66.03%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. TAIR 10
Match: AT3G55880.2 (Alpha/beta hydrolase related protein ) HSP 1 Score: 182.2 bits (461), Expect = 4.3e-46 Identity = 105/194 (54.12%), Postives = 133/194 (68.56%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. TAIR 10
Match: AT3G55880.1 (Alpha/beta hydrolase related protein ) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43 Identity = 100/181 (55.25%), Postives = 127/181 (70.17%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. TAIR 10
Match: AT1G80280.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 0
BLAST of Cucsat.G5865.T2 vs. TAIR 10
Match: AT1G15490.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27 Identity = 77/190 (40.53%), Postives = 110/190 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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